0.024290
0.000000
0.012238
0.000000
0.016042
0.000000
0.000000
0.000000
0.026917
0.00000
0.00000
0.00000
Berry, M.B.
Phillips Jr., G.N.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
116.74
90.00
41.170
62.338
41.600
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C20 H29 N10 O22 P5
916.367
BIS(ADENOSINE)-5'-PENTAPHOSPHATE
non-polymer
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
S
P
N
15
N
O
N
16
N
O
N
17
N
O
N
18
S
P
N
19
N
O
N
20
N
O
N
21
N
O
N
22
N
P
N
23
N
O
N
24
N
O
N
25
N
O
N
26
S
P
N
27
N
O
N
28
N
O
N
29
N
O
N
30
S
P
N
31
N
O
N
32
N
O
N
33
N
O
N
34
N
C
N
35
R
C
N
36
N
O
N
37
S
C
N
38
N
O
N
39
R
C
N
40
N
O
N
41
R
C
Y
42
N
N
Y
43
N
C
Y
44
N
N
Y
45
N
C
Y
46
N
C
N
47
N
N
Y
48
N
N
Y
49
N
C
Y
50
N
N
Y
51
N
C
N
52
N
O
N
53
N
C
N
54
R
C
N
55
N
O
N
56
S
C
N
57
N
O
N
58
R
C
N
59
N
O
N
60
R
C
Y
61
N
N
Y
62
N
C
Y
63
N
N
Y
64
N
C
Y
65
N
C
N
66
N
N
Y
67
N
N
Y
68
N
C
Y
69
N
N
Y
70
N
C
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
N
N
101
S
C
N
102
N
C
N
103
N
O
N
104
N
C
N
105
N
C
N
106
N
C
N
107
N
N
N
108
N
C
N
109
N
N
N
110
N
N
N
111
N
O
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
S
C
N
129
N
C
N
130
N
O
N
131
N
C
N
132
N
C
N
133
N
O
N
134
N
N
N
135
N
O
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
N
N
145
S
C
N
146
N
C
N
147
N
O
N
148
N
C
N
149
N
C
N
150
N
O
N
151
N
O
N
152
N
O
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
N
N
161
R
C
N
162
N
C
N
163
N
O
N
164
N
C
N
165
N
S
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
N
N
175
S
C
N
176
N
C
N
177
N
O
N
178
N
C
N
179
N
C
N
180
N
C
N
181
N
O
N
182
N
N
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
N
N
195
S
C
N
196
N
C
N
197
N
O
N
198
N
C
N
199
N
C
N
200
N
C
N
201
N
O
N
202
N
O
N
203
N
O
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
N
N
214
N
C
N
215
N
C
N
216
N
O
N
217
N
O
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
N
N
224
S
C
N
225
N
C
N
226
N
O
N
227
N
C
Y
228
N
C
Y
229
N
N
Y
230
N
C
Y
231
N
C
Y
232
N
N
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
S
C
N
252
N
C
N
253
N
C
N
254
N
C
N
255
N
O
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
N
N
270
S
C
N
271
N
C
N
272
N
O
N
273
N
C
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
N
296
N
C
N
297
N
C
N
298
N
C
N
299
N
N
N
300
N
O
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
N
N
317
S
C
N
318
N
C
N
319
N
O
N
320
N
C
N
321
N
C
N
322
N
S
N
323
N
C
N
324
N
O
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
N
N
337
S
C
N
338
N
C
N
339
N
O
N
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
Y
345
N
C
Y
346
N
C
N
347
N
O
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
N
N
360
S
C
N
361
N
C
N
362
N
O
N
363
N
C
N
364
N
C
N
365
N
C
N
366
N
O
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
N
N
377
S
C
N
378
N
C
N
379
N
O
N
380
N
C
N
381
N
O
N
382
N
O
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
N
N
391
S
C
N
392
N
C
N
393
N
O
N
394
R
C
N
395
N
O
N
396
N
C
N
397
N
O
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
N
N
408
S
C
N
409
N
C
N
410
N
O
N
411
N
C
Y
412
N
C
Y
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
Y
417
N
C
N
418
N
O
N
419
N
O
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
N
N
432
S
C
N
433
N
C
N
434
N
O
N
435
N
C
N
436
N
C
N
437
N
C
N
438
N
O
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
doub
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
doub
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
doub
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
doub
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
Y
56
N
sing
Y
57
N
sing
Y
58
N
doub
N
59
N
sing
Y
60
N
sing
Y
61
N
sing
Y
62
N
doub
N
63
N
sing
Y
64
N
doub
N
65
N
sing
N
66
N
sing
Y
67
N
sing
Y
68
N
doub
N
69
N
sing
Y
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
Y
89
N
sing
Y
90
N
sing
Y
91
N
doub
N
92
N
sing
Y
93
N
sing
Y
94
N
sing
Y
95
N
doub
N
96
N
sing
Y
97
N
doub
N
98
N
sing
N
99
N
sing
Y
100
N
sing
Y
101
N
doub
N
102
N
sing
Y
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
doub
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
doub
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
doub
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
Y
231
N
sing
Y
232
N
doub
Y
233
N
doub
N
234
N
sing
Y
235
N
sing
N
236
N
sing
Y
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
doub
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
Y
339
N
doub
Y
340
N
sing
Y
341
N
sing
N
342
N
sing
Y
343
N
doub
N
344
N
sing
Y
345
N
doub
N
346
N
sing
Y
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
doub
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
doub
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
doub
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
doub
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
Y
408
N
doub
Y
409
N
sing
Y
410
N
sing
N
411
N
sing
Y
412
N
doub
N
413
N
sing
Y
414
N
doub
N
415
N
sing
Y
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
doub
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
US
Proteins
PSFGEY
0867
0887-3585
32
276
288
10.1002/(SICI)1097-0134(19980815)32:3<276::AID-PROT3>3.0.CO;2-G
9715904
Crystal structures of Bacillus stearothermophilus adenylate kinase with bound Ap5A, Mg2+ Ap5A, and Mn2+ Ap5A reveal an intermediate lid position and six coordinate octahedral geometry for bound Mg2+ and Mn2+.
1998
10.2210/pdb1zin/pdb
pdb_00001zin
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
293
1
IMAGE PLATE
1996-02-02
RIGAKU RAXIS IIC
GRAPHITE(002)
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
SIEMENS
ZINC FINGER
24174.865
ADENYLATE KINASE
2.7.4.3
1
nat
polymer
65.409
ZINC ION
1
syn
non-polymer
916.367
BIS(ADENOSINE)-5'-PENTAPHOSPHATE
1
syn
non-polymer
18.015
water
268
nat
water
ADK
no
no
MNLVLMGLPGAGKGTQAEKIVAAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPDEVTIGIVRERLSKDDCQNG
FLLDGFPRTVAQAEALETMLADIGRKLDYVIHIDVRQDVLMERLTGRRICRNCGATYHLIFHPPAKPGVCDKCGGELYQR
ADDNEATVANRLEVNMKQMKPLVDFYEQKGYLRNINGEQDMEKVFADIRELLGGLAR
MNLVLMGLPGAGKGTQAEKIVAAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPDEVTIGIVRERLSKDDCQNG
FLLDGFPRTVAQAEALETMLADIGRKLDYVIHIDVRQDVLMERLTGRRICRNCGATYHLIFHPPAKPGVCDKCGGELYQR
ADDNEATVANRLEVNMKQMKPLVDFYEQKGYLRNINGEQDMEKVFADIRELLGGLAR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Geobacillus
sample
1422
Geobacillus stearothermophilus
2
1.97
43.5
7.0
AMMONIUM SULFATE/PEG 1000, pH 7.0
diffrn_source
pdbx_database_status
chem_comp_atom
chem_comp_bond
database_2
struct_conn
struct_site
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Data collection
Other
Data collection
Database references
Derived calculations
Refinement description
1
0
1997-06-16
1
1
2008-03-24
1
2
2011-07-13
1
3
2018-03-07
1
4
2024-02-14
1
5
2024-04-03
_diffrn_source.source
_pdbx_database_status.process_site
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1996-06-07
REL
ZN
ZINC ION
AP5
BIS(ADENOSINE)-5'-PENTAPHOSPHATE
HOH
water
ZINC FORMS A ZINC FINGER WITH CYS 130, CYS 133, CYS 150,
AND CYS 153.
IT APPEARS THAT THERE ARE TWO ALTERNATE CONFORMATIONS FOR
FOR THE GAMMA, DELTA, AND EPSILON PHOSPHATES OF HET GROUP
AP5. THERE IS DENSITY FOR THE SECOND CONFORMATION OF THE
DELTA PHOSPHATE BUT NOT FOR THE OTHERS. THUS ONLY ONE
CONFORMATION IS PRESENTED FOR THE GAMMA AND EPSILON
PHOSPHATES.
YEAST ADENYLATE KINASE
Other
experimental model
ZN
219
2
ZN
ZN
219
A
AP5
218
3
AP5
AP5
218
A
HOH
300
4
HOH
HOH
300
A
HOH
301
4
HOH
HOH
301
A
HOH
302
4
HOH
HOH
302
A
HOH
303
4
HOH
HOH
303
A
HOH
304
4
HOH
HOH
304
A
HOH
305
4
HOH
HOH
305
A
HOH
306
4
HOH
HOH
306
A
HOH
307
4
HOH
HOH
307
A
HOH
308
4
HOH
HOH
308
A
HOH
309
4
HOH
HOH
309
A
HOH
310
4
HOH
HOH
310
A
HOH
311
4
HOH
HOH
311
A
HOH
312
4
HOH
HOH
312
A
HOH
313
4
HOH
HOH
313
A
HOH
314
4
HOH
HOH
314
A
HOH
315
4
HOH
HOH
315
A
HOH
316
4
HOH
HOH
316
A
HOH
317
4
HOH
HOH
317
A
HOH
318
4
HOH
HOH
318
A
HOH
319
4
HOH
HOH
319
A
HOH
320
4
HOH
HOH
320
A
HOH
321
4
HOH
HOH
321
A
HOH
322
4
HOH
HOH
322
A
HOH
323
4
HOH
HOH
323
A
HOH
324
4
HOH
HOH
324
A
HOH
325
4
HOH
HOH
325
A
HOH
326
4
HOH
HOH
326
A
HOH
327
4
HOH
HOH
327
A
HOH
328
4
HOH
HOH
328
A
HOH
329
4
HOH
HOH
329
A
HOH
330
4
HOH
HOH
330
A
HOH
331
4
HOH
HOH
331
A
HOH
332
4
HOH
HOH
332
A
HOH
333
4
HOH
HOH
333
A
HOH
334
4
HOH
HOH
334
A
HOH
335
4
HOH
HOH
335
A
HOH
336
4
HOH
HOH
336
A
HOH
337
4
HOH
HOH
337
A
HOH
338
4
HOH
HOH
338
A
HOH
339
4
HOH
HOH
339
A
HOH
340
4
HOH
HOH
340
A
HOH
341
4
HOH
HOH
341
A
HOH
342
4
HOH
HOH
342
A
HOH
343
4
HOH
HOH
343
A
HOH
344
4
HOH
HOH
344
A
HOH
345
4
HOH
HOH
345
A
HOH
346
4
HOH
HOH
346
A
HOH
347
4
HOH
HOH
347
A
HOH
348
4
HOH
HOH
348
A
HOH
349
4
HOH
HOH
349
A
HOH
350
4
HOH
HOH
350
A
HOH
351
4
HOH
HOH
351
A
HOH
352
4
HOH
HOH
352
A
HOH
353
4
HOH
HOH
353
A
HOH
354
4
HOH
HOH
354
A
HOH
355
4
HOH
HOH
355
A
HOH
356
4
HOH
HOH
356
A
HOH
357
4
HOH
HOH
357
A
HOH
358
4
HOH
HOH
358
A
HOH
359
4
HOH
HOH
359
A
HOH
360
4
HOH
HOH
360
A
HOH
361
4
HOH
HOH
361
A
HOH
362
4
HOH
HOH
362
A
HOH
363
4
HOH
HOH
363
A
HOH
364
4
HOH
HOH
364
A
HOH
365
4
HOH
HOH
365
A
HOH
366
4
HOH
HOH
366
A
HOH
367
4
HOH
HOH
367
A
HOH
368
4
HOH
HOH
368
A
HOH
369
4
HOH
HOH
369
A
HOH
370
4
HOH
HOH
370
A
HOH
371
4
HOH
HOH
371
A
HOH
372
4
HOH
HOH
372
A
HOH
373
4
HOH
HOH
373
A
HOH
374
4
HOH
HOH
374
A
HOH
375
4
HOH
HOH
375
A
HOH
376
4
HOH
HOH
376
A
HOH
377
4
HOH
HOH
377
A
HOH
378
4
HOH
HOH
378
A
HOH
379
4
HOH
HOH
379
A
HOH
380
4
HOH
HOH
380
A
HOH
381
4
HOH
HOH
381
A
HOH
382
4
HOH
HOH
382
A
HOH
383
4
HOH
HOH
383
A
HOH
384
4
HOH
HOH
384
A
HOH
385
4
HOH
HOH
385
A
HOH
386
4
HOH
HOH
386
A
HOH
387
4
HOH
HOH
387
A
HOH
388
4
HOH
HOH
388
A
HOH
389
4
HOH
HOH
389
A
HOH
390
4
HOH
HOH
390
A
HOH
391
4
HOH
HOH
391
A
HOH
392
4
HOH
HOH
392
A
HOH
393
4
HOH
HOH
393
A
HOH
394
4
HOH
HOH
394
A
HOH
395
4
HOH
HOH
395
A
HOH
396
4
HOH
HOH
396
A
HOH
397
4
HOH
HOH
397
A
HOH
398
4
HOH
HOH
398
A
HOH
399
4
HOH
HOH
399
A
HOH
400
4
HOH
HOH
400
A
HOH
401
4
HOH
HOH
401
A
HOH
402
4
HOH
HOH
402
A
HOH
403
4
HOH
HOH
403
A
HOH
404
4
HOH
HOH
404
A
HOH
405
4
HOH
HOH
405
A
HOH
406
4
HOH
HOH
406
A
HOH
407
4
HOH
HOH
407
A
HOH
408
4
HOH
HOH
408
A
HOH
409
4
HOH
HOH
409
A
HOH
410
4
HOH
HOH
410
A
HOH
411
4
HOH
HOH
411
A
HOH
412
4
HOH
HOH
412
A
HOH
413
4
HOH
HOH
413
A
HOH
414
4
HOH
HOH
414
A
HOH
415
4
HOH
HOH
415
A
HOH
416
4
HOH
HOH
416
A
HOH
417
4
HOH
HOH
417
A
HOH
418
4
HOH
HOH
418
A
HOH
419
4
HOH
HOH
419
A
HOH
420
4
HOH
HOH
420
A
HOH
421
4
HOH
HOH
421
A
HOH
422
4
HOH
HOH
422
A
HOH
423
4
HOH
HOH
423
A
HOH
424
4
HOH
HOH
424
A
HOH
425
4
HOH
HOH
425
A
HOH
426
4
HOH
HOH
426
A
HOH
427
4
HOH
HOH
427
A
HOH
428
4
HOH
HOH
428
A
HOH
429
4
HOH
HOH
429
A
HOH
430
4
HOH
HOH
430
A
HOH
431
4
HOH
HOH
431
A
HOH
432
4
HOH
HOH
432
A
HOH
433
4
HOH
HOH
433
A
HOH
434
4
HOH
HOH
434
A
HOH
435
4
HOH
HOH
435
A
HOH
436
4
HOH
HOH
436
A
HOH
437
4
HOH
HOH
437
A
HOH
438
4
HOH
HOH
438
A
HOH
439
4
HOH
HOH
439
A
HOH
440
4
HOH
HOH
440
A
HOH
441
4
HOH
HOH
441
A
HOH
442
4
HOH
HOH
442
A
HOH
443
4
HOH
HOH
443
A
HOH
444
4
HOH
HOH
444
A
HOH
445
4
HOH
HOH
445
A
HOH
446
4
HOH
HOH
446
A
HOH
447
4
HOH
HOH
447
A
HOH
448
4
HOH
HOH
448
A
HOH
449
4
HOH
HOH
449
A
HOH
450
4
HOH
HOH
450
A
HOH
451
4
HOH
HOH
451
A
HOH
452
4
HOH
HOH
452
A
HOH
453
4
HOH
HOH
453
A
HOH
454
4
HOH
HOH
454
A
HOH
455
4
HOH
HOH
455
A
HOH
456
4
HOH
HOH
456
A
HOH
457
4
HOH
HOH
457
A
HOH
458
4
HOH
HOH
458
A
HOH
459
4
HOH
HOH
459
A
HOH
460
4
HOH
HOH
460
A
HOH
461
4
HOH
HOH
461
A
HOH
462
4
HOH
HOH
462
A
HOH
463
4
HOH
HOH
463
A
HOH
464
4
HOH
HOH
464
A
HOH
465
4
HOH
HOH
465
A
HOH
466
4
HOH
HOH
466
A
HOH
467
4
HOH
HOH
467
A
HOH
468
4
HOH
HOH
468
A
HOH
469
4
HOH
HOH
469
A
HOH
470
4
HOH
HOH
470
A
HOH
471
4
HOH
HOH
471
A
HOH
472
4
HOH
HOH
472
A
HOH
473
4
HOH
HOH
473
A
HOH
474
4
HOH
HOH
474
A
HOH
475
4
HOH
HOH
475
A
HOH
476
4
HOH
HOH
476
A
HOH
477
4
HOH
HOH
477
A
HOH
478
4
HOH
HOH
478
A
HOH
479
4
HOH
HOH
479
A
HOH
480
4
HOH
HOH
480
A
HOH
481
4
HOH
HOH
481
A
HOH
482
4
HOH
HOH
482
A
HOH
483
4
HOH
HOH
483
A
HOH
484
4
HOH
HOH
484
A
HOH
485
4
HOH
HOH
485
A
HOH
486
4
HOH
HOH
486
A
HOH
487
4
HOH
HOH
487
A
HOH
488
4
HOH
HOH
488
A
HOH
489
4
HOH
HOH
489
A
HOH
490
4
HOH
HOH
490
A
HOH
491
4
HOH
HOH
491
A
HOH
492
4
HOH
HOH
492
A
HOH
493
4
HOH
HOH
493
A
HOH
494
4
HOH
HOH
494
A
HOH
495
4
HOH
HOH
495
A
HOH
496
4
HOH
HOH
496
A
HOH
497
4
HOH
HOH
497
A
HOH
498
4
HOH
HOH
498
A
HOH
499
4
HOH
HOH
499
A
HOH
500
4
HOH
HOH
500
A
HOH
501
4
HOH
HOH
501
A
HOH
502
4
HOH
HOH
502
A
HOH
503
4
HOH
HOH
503
A
HOH
504
4
HOH
HOH
504
A
HOH
505
4
HOH
HOH
505
A
HOH
506
4
HOH
HOH
506
A
HOH
507
4
HOH
HOH
507
A
HOH
508
4
HOH
HOH
508
A
HOH
509
4
HOH
HOH
509
A
HOH
510
4
HOH
HOH
510
A
HOH
511
4
HOH
HOH
511
A
HOH
512
4
HOH
HOH
512
A
HOH
513
4
HOH
HOH
513
A
HOH
514
4
HOH
HOH
514
A
HOH
515
4
HOH
HOH
515
A
HOH
516
4
HOH
HOH
516
A
HOH
517
4
HOH
HOH
517
A
HOH
518
4
HOH
HOH
518
A
HOH
519
4
HOH
HOH
519
A
HOH
520
4
HOH
HOH
520
A
HOH
521
4
HOH
HOH
521
A
HOH
522
4
HOH
HOH
522
A
HOH
523
4
HOH
HOH
523
A
HOH
524
4
HOH
HOH
524
A
HOH
525
4
HOH
HOH
525
A
HOH
526
4
HOH
HOH
526
A
HOH
527
4
HOH
HOH
527
A
HOH
528
4
HOH
HOH
528
A
HOH
529
4
HOH
HOH
529
A
HOH
530
4
HOH
HOH
530
A
HOH
531
4
HOH
HOH
531
A
HOH
532
4
HOH
HOH
532
A
HOH
533
4
HOH
HOH
533
A
HOH
534
4
HOH
HOH
534
A
HOH
535
4
HOH
HOH
535
A
HOH
536
4
HOH
HOH
536
A
HOH
537
4
HOH
HOH
537
A
HOH
538
4
HOH
HOH
538
A
HOH
539
4
HOH
HOH
539
A
HOH
540
4
HOH
HOH
540
A
HOH
541
4
HOH
HOH
541
A
HOH
542
4
HOH
HOH
542
A
HOH
543
4
HOH
HOH
543
A
HOH
544
4
HOH
HOH
544
A
HOH
545
4
HOH
HOH
545
A
HOH
546
4
HOH
HOH
546
A
HOH
547
4
HOH
HOH
547
A
HOH
548
4
HOH
HOH
548
A
HOH
549
4
HOH
HOH
549
A
HOH
550
4
HOH
HOH
550
A
HOH
551
4
HOH
HOH
551
A
HOH
552
4
HOH
HOH
552
A
HOH
553
4
HOH
HOH
553
A
HOH
554
4
HOH
HOH
554
A
HOH
555
4
HOH
HOH
555
A
HOH
556
4
HOH
HOH
556
A
HOH
557
4
HOH
HOH
557
A
HOH
558
4
HOH
HOH
558
A
HOH
559
4
HOH
HOH
559
A
HOH
560
4
HOH
HOH
560
A
HOH
561
4
HOH
HOH
561
A
HOH
562
4
HOH
HOH
562
A
HOH
563
4
HOH
HOH
563
A
HOH
564
4
HOH
HOH
564
A
HOH
565
4
HOH
HOH
565
A
HOH
566
4
HOH
HOH
566
A
HOH
567
4
HOH
HOH
567
A
MET
1
n
1
MET
1
A
ASN
2
n
2
ASN
2
A
LEU
3
n
3
LEU
3
A
VAL
4
n
4
VAL
4
A
LEU
5
n
5
LEU
5
A
MET
6
n
6
MET
6
A
GLY
7
n
7
GLY
7
A
LEU
8
n
8
LEU
8
A
PRO
9
n
9
PRO
9
A
GLY
10
n
10
GLY
10
A
ALA
11
n
11
ALA
11
A
GLY
12
n
12
GLY
12
A
LYS
13
n
13
LYS
13
A
GLY
14
n
14
GLY
14
A
THR
15
n
15
THR
15
A
GLN
16
n
16
GLN
16
A
ALA
17
n
17
ALA
17
A
GLU
18
n
18
GLU
18
A
LYS
19
n
19
LYS
19
A
ILE
20
n
20
ILE
20
A
VAL
21
n
21
VAL
21
A
ALA
22
n
22
ALA
22
A
ALA
23
n
23
ALA
23
A
TYR
24
n
24
TYR
24
A
GLY
25
n
25
GLY
25
A
ILE
26
n
26
ILE
26
A
PRO
27
n
27
PRO
27
A
HIS
28
n
28
HIS
28
A
ILE
29
n
29
ILE
29
A
SER
30
n
30
SER
30
A
THR
31
n
31
THR
31
A
GLY
32
n
32
GLY
32
A
ASP
33
n
33
ASP
33
A
MET
34
n
34
MET
34
A
PHE
35
n
35
PHE
35
A
ARG
36
n
36
ARG
36
A
ALA
37
n
37
ALA
37
A
ALA
38
n
38
ALA
38
A
MET
39
n
39
MET
39
A
LYS
40
n
40
LYS
40
A
GLU
41
n
41
GLU
41
A
GLY
42
n
42
GLY
42
A
THR
43
n
43
THR
43
A
PRO
44
n
44
PRO
44
A
LEU
45
n
45
LEU
45
A
GLY
46
n
46
GLY
46
A
LEU
47
n
47
LEU
47
A
GLN
48
n
48
GLN
48
A
ALA
49
n
49
ALA
49
A
LYS
50
n
50
LYS
50
A
GLN
51
n
51
GLN
51
A
TYR
52
n
52
TYR
52
A
MET
53
n
53
MET
53
A
ASP
54
n
54
ASP
54
A
ARG
55
n
55
ARG
55
A
GLY
56
n
56
GLY
56
A
ASP
57
n
57
ASP
57
A
LEU
58
n
58
LEU
58
A
VAL
59
n
59
VAL
59
A
PRO
60
n
60
PRO
60
A
ASP
61
n
61
ASP
61
A
GLU
62
n
62
GLU
62
A
VAL
63
n
63
VAL
63
A
THR
64
n
64
THR
64
A
ILE
65
n
65
ILE
65
A
GLY
66
n
66
GLY
66
A
ILE
67
n
67
ILE
67
A
VAL
68
n
68
VAL
68
A
ARG
69
n
69
ARG
69
A
GLU
70
n
70
GLU
70
A
ARG
71
n
71
ARG
71
A
LEU
72
n
72
LEU
72
A
SER
73
n
73
SER
73
A
LYS
74
n
74
LYS
74
A
ASP
75
n
75
ASP
75
A
ASP
76
n
76
ASP
76
A
CYS
77
n
77
CYS
77
A
GLN
78
n
78
GLN
78
A
ASN
79
n
79
ASN
79
A
GLY
80
n
80
GLY
80
A
PHE
81
n
81
PHE
81
A
LEU
82
n
82
LEU
82
A
LEU
83
n
83
LEU
83
A
ASP
84
n
84
ASP
84
A
GLY
85
n
85
GLY
85
A
PHE
86
n
86
PHE
86
A
PRO
87
n
87
PRO
87
A
ARG
88
n
88
ARG
88
A
THR
89
n
89
THR
89
A
VAL
90
n
90
VAL
90
A
ALA
91
n
91
ALA
91
A
GLN
92
n
92
GLN
92
A
ALA
93
n
93
ALA
93
A
GLU
94
n
94
GLU
94
A
ALA
95
n
95
ALA
95
A
LEU
96
n
96
LEU
96
A
GLU
97
n
97
GLU
97
A
THR
98
n
98
THR
98
A
MET
99
n
99
MET
99
A
LEU
100
n
100
LEU
100
A
ALA
101
n
101
ALA
101
A
ASP
102
n
102
ASP
102
A
ILE
103
n
103
ILE
103
A
GLY
104
n
104
GLY
104
A
ARG
105
n
105
ARG
105
A
LYS
106
n
106
LYS
106
A
LEU
107
n
107
LEU
107
A
ASP
108
n
108
ASP
108
A
TYR
109
n
109
TYR
109
A
VAL
110
n
110
VAL
110
A
ILE
111
n
111
ILE
111
A
HIS
112
n
112
HIS
112
A
ILE
113
n
113
ILE
113
A
ASP
114
n
114
ASP
114
A
VAL
115
n
115
VAL
115
A
ARG
116
n
116
ARG
116
A
GLN
117
n
117
GLN
117
A
ASP
118
n
118
ASP
118
A
VAL
119
n
119
VAL
119
A
LEU
120
n
120
LEU
120
A
MET
121
n
121
MET
121
A
GLU
122
n
122
GLU
122
A
ARG
123
n
123
ARG
123
A
LEU
124
n
124
LEU
124
A
THR
125
n
125
THR
125
A
GLY
126
n
126
GLY
126
A
ARG
127
n
127
ARG
127
A
ARG
128
n
128
ARG
128
A
ILE
129
n
129
ILE
129
A
CYS
130
n
130
CYS
130
A
ARG
131
n
131
ARG
131
A
ASN
132
n
132
ASN
132
A
CYS
133
n
133
CYS
133
A
GLY
134
n
134
GLY
134
A
ALA
135
n
135
ALA
135
A
THR
136
n
136
THR
136
A
TYR
137
n
137
TYR
137
A
HIS
138
n
138
HIS
138
A
LEU
139
n
139
LEU
139
A
ILE
140
n
140
ILE
140
A
PHE
141
n
141
PHE
141
A
HIS
142
n
142
HIS
142
A
PRO
143
n
143
PRO
143
A
PRO
144
n
144
PRO
144
A
ALA
145
n
145
ALA
145
A
LYS
146
n
146
LYS
146
A
PRO
147
n
147
PRO
147
A
GLY
148
n
148
GLY
148
A
VAL
149
n
149
VAL
149
A
CYS
150
n
150
CYS
150
A
ASP
151
n
151
ASP
151
A
LYS
152
n
152
LYS
152
A
CYS
153
n
153
CYS
153
A
GLY
154
n
154
GLY
154
A
GLY
155
n
155
GLY
155
A
GLU
156
n
156
GLU
156
A
LEU
157
n
157
LEU
157
A
TYR
158
n
158
TYR
158
A
GLN
159
n
159
GLN
159
A
ARG
160
n
160
ARG
160
A
ALA
161
n
161
ALA
161
A
ASP
162
n
162
ASP
162
A
ASP
163
n
163
ASP
163
A
ASN
164
n
164
ASN
164
A
GLU
165
n
165
GLU
165
A
ALA
166
n
166
ALA
166
A
THR
167
n
167
THR
167
A
VAL
168
n
168
VAL
168
A
ALA
169
n
169
ALA
169
A
ASN
170
n
170
ASN
170
A
ARG
171
n
171
ARG
171
A
LEU
172
n
172
LEU
172
A
GLU
173
n
173
GLU
173
A
VAL
174
n
174
VAL
174
A
ASN
175
n
175
ASN
175
A
MET
176
n
176
MET
176
A
LYS
177
n
177
LYS
177
A
GLN
178
n
178
GLN
178
A
MET
179
n
179
MET
179
A
LYS
180
n
180
LYS
180
A
PRO
181
n
181
PRO
181
A
LEU
182
n
182
LEU
182
A
VAL
183
n
183
VAL
183
A
ASP
184
n
184
ASP
184
A
PHE
185
n
185
PHE
185
A
TYR
186
n
186
TYR
186
A
GLU
187
n
187
GLU
187
A
GLN
188
n
188
GLN
188
A
LYS
189
n
189
LYS
189
A
GLY
190
n
190
GLY
190
A
TYR
191
n
191
TYR
191
A
LEU
192
n
192
LEU
192
A
ARG
193
n
193
ARG
193
A
ASN
194
n
194
ASN
194
A
ILE
195
n
195
ILE
195
A
ASN
196
n
196
ASN
196
A
GLY
197
n
197
GLY
197
A
GLU
198
n
198
GLU
198
A
GLN
199
n
199
GLN
199
A
ASP
200
n
200
ASP
200
A
MET
201
n
201
MET
201
A
GLU
202
n
202
GLU
202
A
LYS
203
n
203
LYS
203
A
VAL
204
n
204
VAL
204
A
PHE
205
n
205
PHE
205
A
ALA
206
n
206
ALA
206
A
ASP
207
n
207
ASP
207
A
ILE
208
n
208
ILE
208
A
ARG
209
n
209
ARG
209
A
GLU
210
n
210
GLU
210
A
LEU
211
n
211
LEU
211
A
LEU
212
n
212
LEU
212
A
GLY
213
n
213
GLY
213
A
GLY
214
n
214
GLY
214
A
LEU
215
n
215
LEU
215
A
ALA
216
n
216
ALA
216
A
ARG
217
n
217
ARG
217
A
author_defined_assembly
1
monomeric
A
CYS
130
A
SG
CYS
130
1_555
A
ZN
219
B
ZN
ZN
1_555
A
CYS
133
A
SG
CYS
133
1_555
114.0
A
CYS
130
A
SG
CYS
130
1_555
A
ZN
219
B
ZN
ZN
1_555
A
CYS
150
A
SG
CYS
150
1_555
106.2
A
CYS
133
A
SG
CYS
133
1_555
A
ZN
219
B
ZN
ZN
1_555
A
CYS
150
A
SG
CYS
150
1_555
106.6
A
CYS
130
A
SG
CYS
130
1_555
A
ZN
219
B
ZN
ZN
1_555
A
CYS
153
A
SG
CYS
153
1_555
98.0
A
CYS
133
A
SG
CYS
133
1_555
A
ZN
219
B
ZN
ZN
1_555
A
CYS
153
A
SG
CYS
153
1_555
118.5
A
CYS
150
A
SG
CYS
150
1_555
A
ZN
219
B
ZN
ZN
1_555
A
CYS
153
A
SG
CYS
153
1_555
112.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ARG
193
A
O
ARG
193
A
N
VAL
110
A
N
VAL
110
A
O
TYR
109
A
O
TYR
109
A
N
VAL
4
A
N
VAL
4
A
O
LEU
3
A
O
LEU
3
A
N
PHE
81
A
N
PHE
81
A
O
LEU
82
A
O
LEU
82
A
N
PRO
27
A
N
PRO
27
A
O
ARG
128
A
O
ARG
128
A
N
TYR
137
A
N
TYR
137
1
A
ASP
108
-92.11
-60.28
1
A
HIS
142
-161.64
78.70
1
A
GLU
198
-95.00
58.92
14.8
0.2160000
0.1730000
0.1730000
1.6
10.0
1553
23448
10.
97.
RANDOM
1
FREE R
0.
MOLECULAR REPLACEMENT
YEAST ADENYLATE KINASE
1.6
10.0
268
2404
61
0
2075
0.011
1.978
22.62
1.417
1.6
10.0
1ZIN
23448
0.0
0.0970000
1
97.
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
data reduction
DENZO
data scaling
SCALEPACK
phasing
X-PLOR
3.1
ADENYLATE KINASE WITH BOUND AP5A
1
N
N
2
N
N
3
N
N
4
N
N
A
LYS
13
A
LYS
13
HELX_P
A
TYR
24
A
TYR
24
1
1
12
A
THR
31
A
THR
31
HELX_P
A
GLU
41
A
GLU
41
1
2
11
A
PRO
44
A
PRO
44
HELX_P
A
ARG
55
A
ARG
55
1
3
12
A
ASP
61
A
ASP
61
HELX_P
A
LEU
72
A
LEU
72
1
4
12
A
ASP
75
A
ASP
75
HELX_P
A
CYS
77
A
CYS
77
5
5
3
A
VAL
90
A
VAL
90
HELX_P
A
ILE
103
A
ILE
103
1
6
14
A
GLN
117
A
GLN
117
HELX_P
A
THR
125
A
THR
125
1
7
9
A
ALA
161
A
ALA
161
HELX_P
A
ASP
163
A
ASP
163
5
8
3
A
GLU
165
A
GLU
165
HELX_P
A
LYS
189
A
LYS
189
1
9
25
A
MET
201
A
MET
201
HELX_P
A
LEU
215
A
LEU
215
1
10
15
metalc
2.335
A
CYS
130
A
SG
CYS
130
1_555
A
ZN
219
B
ZN
ZN
1_555
metalc
2.297
A
CYS
133
A
SG
CYS
133
1_555
A
ZN
219
B
ZN
ZN
1_555
metalc
2.319
A
CYS
150
A
SG
CYS
150
1_555
A
ZN
219
B
ZN
ZN
1_555
metalc
2.329
A
CYS
153
A
SG
CYS
153
1_555
A
ZN
219
B
ZN
ZN
1_555
PHOSPHOTRANSFERASE
PHOSPHOTRANSFERASE, ZINC FINGER
A
PHE
86
A
PHE
86
1
A
PRO
87
A
PRO
87
0.32
KAD_BACST
UNP
1
1
P27142
MNLVLMGLPGAGKGTQAEKIVAAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPDEVTIGIVRERLSKDDCQNG
FLLDGFPRTVAQAEALETMLADIGRKLDYVIHIDVRQDVLMERLTGRRICRNCGATYHLIFHPPAKPGVCDKCGGELYQR
ADDNEATVANRLEVNMKQMKPLVDFYEQKGYLRNINGEQDMEKVFADIRELLGGLAR
1
217
1ZIN
1
217
P27142
A
1
1
217
5
2
parallel
parallel
parallel
parallel
anti-parallel
A
LEU
192
A
LEU
192
A
ASN
196
A
ASN
196
A
TYR
109
A
TYR
109
A
ASP
114
A
ASP
114
A
ASN
2
A
ASN
2
A
MET
6
A
MET
6
A
PHE
81
A
PHE
81
A
ASP
84
A
ASP
84
A
PRO
27
A
PRO
27
A
SER
30
A
SER
30
A
ARG
127
A
ARG
127
A
ILE
129
A
ILE
129
A
THR
136
A
THR
136
A
HIS
138
A
HIS
138
BINDING SITE FOR RESIDUE ZN A 219
A
ZN
219
Software
4
BINDING SITE FOR RESIDUE AP5 A 218
A
AP5
218
Software
36
A
CYS
130
A
CYS
130
4
1_555
A
CYS
133
A
CYS
133
4
1_555
A
CYS
150
A
CYS
150
4
1_555
A
CYS
153
A
CYS
153
4
1_555
A
PRO
9
A
PRO
9
36
1_555
A
GLY
10
A
GLY
10
36
1_555
A
ALA
11
A
ALA
11
36
1_555
A
GLY
12
A
GLY
12
36
1_555
A
LYS
13
A
LYS
13
36
1_555
A
GLY
14
A
GLY
14
36
1_555
A
THR
15
A
THR
15
36
1_555
A
THR
31
A
THR
31
36
1_555
A
PHE
35
A
PHE
35
36
1_555
A
ARG
36
A
ARG
36
36
1_555
A
MET
53
A
MET
53
36
1_555
A
ASP
57
A
ASP
57
36
1_555
A
VAL
59
A
VAL
59
36
1_555
A
THR
64
A
THR
64
36
1_555
A
GLY
85
A
GLY
85
36
1_555
A
ARG
88
A
ARG
88
36
1_555
A
GLN
92
A
GLN
92
36
1_555
A
ARG
123
A
ARG
123
36
1_555
A
LEU
124
A
LEU
124
36
1_555
A
ARG
127
A
ARG
127
36
1_555
A
TYR
137
A
TYR
137
36
1_555
A
HIS
138
A
HIS
138
36
1_555
A
HIS
142
A
HIS
142
36
1_555
A
ARG
160
A
ARG
160
36
1_555
A
ARG
171
A
ARG
171
36
1_555
A
GLN
199
A
GLN
199
36
1_555
A
MET
201
A
MET
201
36
1_555
A
HOH
300
D
HOH
36
1_555
A
HOH
301
D
HOH
36
1_555
A
HOH
306
D
HOH
36
1_555
A
HOH
309
D
HOH
36
1_555
A
HOH
311
D
HOH
36
1_555
A
HOH
352
D
HOH
36
1_555
A
HOH
355
D
HOH
36
1_555
A
HOH
426
D
HOH
36
1_555
A
HOH
532
D
HOH
36
1_555
4
P 1 21 1