0.024290 0.000000 0.012238 0.000000 0.016042 0.000000 0.000000 0.000000 0.026917 0.00000 0.00000 0.00000 Berry, M.B. Phillips Jr., G.N. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 116.74 90.00 41.170 62.338 41.600 C3 H7 N O2 89.093 y ALANINE L-peptide linking C20 H29 N10 O22 P5 916.367 BIS(ADENOSINE)-5'-PENTAPHOSPHATE non-polymer C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 S P N 15 N O N 16 N O N 17 N O N 18 S P N 19 N O N 20 N O N 21 N O N 22 N P N 23 N O N 24 N O N 25 N O N 26 S P N 27 N O N 28 N O N 29 N O N 30 S P N 31 N O N 32 N O N 33 N O N 34 N C N 35 R C N 36 N O N 37 S C N 38 N O N 39 R C N 40 N O N 41 R C Y 42 N N Y 43 N C Y 44 N N Y 45 N C Y 46 N C N 47 N N Y 48 N N Y 49 N C Y 50 N N Y 51 N C N 52 N O N 53 N C N 54 R C N 55 N O N 56 S C N 57 N O N 58 R C N 59 N O N 60 R C Y 61 N N Y 62 N C Y 63 N N Y 64 N C Y 65 N C N 66 N N Y 67 N N Y 68 N C Y 69 N N Y 70 N C N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N N N 101 S C N 102 N C N 103 N O N 104 N C N 105 N C N 106 N C N 107 N N N 108 N C N 109 N N N 110 N N N 111 N O N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 S C N 129 N C N 130 N O N 131 N C N 132 N C N 133 N O N 134 N N N 135 N O N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N N N 145 S C N 146 N C N 147 N O N 148 N C N 149 N C N 150 N O N 151 N O N 152 N O N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N N N 161 R C N 162 N C N 163 N O N 164 N C N 165 N S N 166 N O N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N N N 175 S C N 176 N C N 177 N O N 178 N C N 179 N C N 180 N C N 181 N O N 182 N N N 183 N O N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N N N 195 S C N 196 N C N 197 N O N 198 N C N 199 N C N 200 N C N 201 N O N 202 N O N 203 N O N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N N N 214 N C N 215 N C N 216 N O N 217 N O N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N N N 224 S C N 225 N C N 226 N O N 227 N C Y 228 N C Y 229 N N Y 230 N C Y 231 N C Y 232 N N N 233 N O N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N O N 245 N H N 246 N H N 247 N N N 248 S C N 249 N C N 250 N O N 251 S C N 252 N C N 253 N C N 254 N C N 255 N O N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N N N 270 S C N 271 N C N 272 N O N 273 N C N 274 N C N 275 N C N 276 N C N 277 N O N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N N N 292 S C N 293 N C N 294 N O N 295 N C N 296 N C N 297 N C N 298 N C N 299 N N N 300 N O N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N N N 317 S C N 318 N C N 319 N O N 320 N C N 321 N C N 322 N S N 323 N C N 324 N O N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N N N 337 S C N 338 N C N 339 N O N 340 N C Y 341 N C Y 342 N C Y 343 N C Y 344 N C Y 345 N C Y 346 N C N 347 N O N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N N N 360 S C N 361 N C N 362 N O N 363 N C N 364 N C N 365 N C N 366 N O N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N N N 377 S C N 378 N C N 379 N O N 380 N C N 381 N O N 382 N O N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N N N 391 S C N 392 N C N 393 N O N 394 R C N 395 N O N 396 N C N 397 N O N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N N N 408 S C N 409 N C N 410 N O N 411 N C Y 412 N C Y 413 N C Y 414 N C Y 415 N C Y 416 N C Y 417 N C N 418 N O N 419 N O N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N N N 432 S C N 433 N C N 434 N O N 435 N C N 436 N C N 437 N C N 438 N O N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N doub N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N doub N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N doub N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N doub N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing Y 56 N sing Y 57 N sing Y 58 N doub N 59 N sing Y 60 N sing Y 61 N sing Y 62 N doub N 63 N sing Y 64 N doub N 65 N sing N 66 N sing Y 67 N sing Y 68 N doub N 69 N sing Y 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing Y 89 N sing Y 90 N sing Y 91 N doub N 92 N sing Y 93 N sing Y 94 N sing Y 95 N doub N 96 N sing Y 97 N doub N 98 N sing N 99 N sing Y 100 N sing Y 101 N doub N 102 N sing Y 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N doub N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N doub N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N doub N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N doub N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N doub N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N doub N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N doub N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N doub N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N doub N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N doub N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N doub N 227 N sing N 228 N sing N 229 N sing N 230 N sing Y 231 N sing Y 232 N doub Y 233 N doub N 234 N sing Y 235 N sing N 236 N sing Y 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N doub N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N doub N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N doub N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N doub N 335 N sing N 336 N sing N 337 N sing N 338 N sing Y 339 N doub Y 340 N sing Y 341 N sing N 342 N sing Y 343 N doub N 344 N sing Y 345 N doub N 346 N sing Y 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N doub N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N doub N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N doub N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N doub N 404 N sing N 405 N sing N 406 N sing N 407 N sing Y 408 N doub Y 409 N sing Y 410 N sing N 411 N sing Y 412 N doub N 413 N sing Y 414 N doub N 415 N sing Y 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N doub N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing US Proteins PSFGEY 0867 0887-3585 32 276 288 10.1002/(SICI)1097-0134(19980815)32:3<276::AID-PROT3>3.0.CO;2-G 9715904 Crystal structures of Bacillus stearothermophilus adenylate kinase with bound Ap5A, Mg2+ Ap5A, and Mn2+ Ap5A reveal an intermediate lid position and six coordinate octahedral geometry for bound Mg2+ and Mn2+. 1998 10.2210/pdb1zin/pdb pdb_00001zin 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 293 1 IMAGE PLATE 1996-02-02 RIGAKU RAXIS IIC GRAPHITE(002) M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE SIEMENS ZINC FINGER 24174.865 ADENYLATE KINASE 2.7.4.3 1 nat polymer 65.409 ZINC ION 1 syn non-polymer 916.367 BIS(ADENOSINE)-5'-PENTAPHOSPHATE 1 syn non-polymer 18.015 water 268 nat water ADK no no MNLVLMGLPGAGKGTQAEKIVAAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPDEVTIGIVRERLSKDDCQNG FLLDGFPRTVAQAEALETMLADIGRKLDYVIHIDVRQDVLMERLTGRRICRNCGATYHLIFHPPAKPGVCDKCGGELYQR ADDNEATVANRLEVNMKQMKPLVDFYEQKGYLRNINGEQDMEKVFADIRELLGGLAR MNLVLMGLPGAGKGTQAEKIVAAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPDEVTIGIVRERLSKDDCQNG FLLDGFPRTVAQAEALETMLADIGRKLDYVIHIDVRQDVLMERLTGRRICRNCGATYHLIFHPPAKPGVCDKCGGELYQR ADDNEATVANRLEVNMKQMKPLVDFYEQKGYLRNINGEQDMEKVFADIRELLGGLAR A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Geobacillus sample 1422 Geobacillus stearothermophilus 2 1.97 43.5 7.0 AMMONIUM SULFATE/PEG 1000, pH 7.0 diffrn_source pdbx_database_status chem_comp_atom chem_comp_bond database_2 struct_conn struct_site pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Data collection Other Data collection Database references Derived calculations Refinement description 1 0 1997-06-16 1 1 2008-03-24 1 2 2011-07-13 1 3 2018-03-07 1 4 2024-02-14 1 5 2024-04-03 _diffrn_source.source _pdbx_database_status.process_site _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1996-06-07 REL ZN ZINC ION AP5 BIS(ADENOSINE)-5'-PENTAPHOSPHATE HOH water ZINC FORMS A ZINC FINGER WITH CYS 130, CYS 133, CYS 150, AND CYS 153. IT APPEARS THAT THERE ARE TWO ALTERNATE CONFORMATIONS FOR FOR THE GAMMA, DELTA, AND EPSILON PHOSPHATES OF HET GROUP AP5. THERE IS DENSITY FOR THE SECOND CONFORMATION OF THE DELTA PHOSPHATE BUT NOT FOR THE OTHERS. THUS ONLY ONE CONFORMATION IS PRESENTED FOR THE GAMMA AND EPSILON PHOSPHATES. YEAST ADENYLATE KINASE Other experimental model ZN 219 2 ZN ZN 219 A AP5 218 3 AP5 AP5 218 A HOH 300 4 HOH HOH 300 A HOH 301 4 HOH HOH 301 A HOH 302 4 HOH HOH 302 A HOH 303 4 HOH HOH 303 A HOH 304 4 HOH HOH 304 A HOH 305 4 HOH HOH 305 A HOH 306 4 HOH HOH 306 A HOH 307 4 HOH HOH 307 A HOH 308 4 HOH HOH 308 A HOH 309 4 HOH HOH 309 A HOH 310 4 HOH HOH 310 A HOH 311 4 HOH HOH 311 A HOH 312 4 HOH HOH 312 A HOH 313 4 HOH HOH 313 A HOH 314 4 HOH HOH 314 A HOH 315 4 HOH HOH 315 A HOH 316 4 HOH HOH 316 A HOH 317 4 HOH HOH 317 A HOH 318 4 HOH HOH 318 A HOH 319 4 HOH HOH 319 A HOH 320 4 HOH HOH 320 A HOH 321 4 HOH HOH 321 A HOH 322 4 HOH HOH 322 A HOH 323 4 HOH HOH 323 A HOH 324 4 HOH HOH 324 A HOH 325 4 HOH HOH 325 A HOH 326 4 HOH HOH 326 A HOH 327 4 HOH HOH 327 A HOH 328 4 HOH HOH 328 A HOH 329 4 HOH HOH 329 A HOH 330 4 HOH HOH 330 A HOH 331 4 HOH HOH 331 A HOH 332 4 HOH HOH 332 A HOH 333 4 HOH HOH 333 A HOH 334 4 HOH HOH 334 A HOH 335 4 HOH HOH 335 A HOH 336 4 HOH HOH 336 A HOH 337 4 HOH HOH 337 A HOH 338 4 HOH HOH 338 A HOH 339 4 HOH HOH 339 A HOH 340 4 HOH HOH 340 A HOH 341 4 HOH HOH 341 A HOH 342 4 HOH HOH 342 A HOH 343 4 HOH HOH 343 A HOH 344 4 HOH HOH 344 A HOH 345 4 HOH HOH 345 A HOH 346 4 HOH HOH 346 A HOH 347 4 HOH HOH 347 A HOH 348 4 HOH HOH 348 A HOH 349 4 HOH HOH 349 A HOH 350 4 HOH HOH 350 A HOH 351 4 HOH HOH 351 A HOH 352 4 HOH HOH 352 A HOH 353 4 HOH HOH 353 A HOH 354 4 HOH HOH 354 A HOH 355 4 HOH HOH 355 A HOH 356 4 HOH HOH 356 A HOH 357 4 HOH HOH 357 A HOH 358 4 HOH HOH 358 A HOH 359 4 HOH HOH 359 A HOH 360 4 HOH HOH 360 A HOH 361 4 HOH HOH 361 A HOH 362 4 HOH HOH 362 A HOH 363 4 HOH HOH 363 A HOH 364 4 HOH HOH 364 A HOH 365 4 HOH HOH 365 A HOH 366 4 HOH HOH 366 A HOH 367 4 HOH HOH 367 A HOH 368 4 HOH HOH 368 A HOH 369 4 HOH HOH 369 A HOH 370 4 HOH HOH 370 A HOH 371 4 HOH HOH 371 A HOH 372 4 HOH HOH 372 A HOH 373 4 HOH HOH 373 A HOH 374 4 HOH HOH 374 A HOH 375 4 HOH HOH 375 A HOH 376 4 HOH HOH 376 A HOH 377 4 HOH HOH 377 A HOH 378 4 HOH HOH 378 A HOH 379 4 HOH HOH 379 A HOH 380 4 HOH HOH 380 A HOH 381 4 HOH HOH 381 A HOH 382 4 HOH HOH 382 A HOH 383 4 HOH HOH 383 A HOH 384 4 HOH HOH 384 A HOH 385 4 HOH HOH 385 A HOH 386 4 HOH HOH 386 A HOH 387 4 HOH HOH 387 A HOH 388 4 HOH HOH 388 A HOH 389 4 HOH HOH 389 A HOH 390 4 HOH HOH 390 A HOH 391 4 HOH HOH 391 A HOH 392 4 HOH HOH 392 A HOH 393 4 HOH HOH 393 A HOH 394 4 HOH HOH 394 A HOH 395 4 HOH HOH 395 A HOH 396 4 HOH HOH 396 A HOH 397 4 HOH HOH 397 A HOH 398 4 HOH HOH 398 A HOH 399 4 HOH HOH 399 A HOH 400 4 HOH HOH 400 A HOH 401 4 HOH HOH 401 A HOH 402 4 HOH HOH 402 A HOH 403 4 HOH HOH 403 A HOH 404 4 HOH HOH 404 A HOH 405 4 HOH HOH 405 A HOH 406 4 HOH HOH 406 A HOH 407 4 HOH HOH 407 A HOH 408 4 HOH HOH 408 A HOH 409 4 HOH HOH 409 A HOH 410 4 HOH HOH 410 A HOH 411 4 HOH HOH 411 A HOH 412 4 HOH HOH 412 A HOH 413 4 HOH HOH 413 A HOH 414 4 HOH HOH 414 A HOH 415 4 HOH HOH 415 A HOH 416 4 HOH HOH 416 A HOH 417 4 HOH HOH 417 A HOH 418 4 HOH HOH 418 A HOH 419 4 HOH HOH 419 A HOH 420 4 HOH HOH 420 A HOH 421 4 HOH HOH 421 A HOH 422 4 HOH HOH 422 A HOH 423 4 HOH HOH 423 A HOH 424 4 HOH HOH 424 A HOH 425 4 HOH HOH 425 A HOH 426 4 HOH HOH 426 A HOH 427 4 HOH HOH 427 A HOH 428 4 HOH HOH 428 A HOH 429 4 HOH HOH 429 A HOH 430 4 HOH HOH 430 A HOH 431 4 HOH HOH 431 A HOH 432 4 HOH HOH 432 A HOH 433 4 HOH HOH 433 A HOH 434 4 HOH HOH 434 A HOH 435 4 HOH HOH 435 A HOH 436 4 HOH HOH 436 A HOH 437 4 HOH HOH 437 A HOH 438 4 HOH HOH 438 A HOH 439 4 HOH HOH 439 A HOH 440 4 HOH HOH 440 A HOH 441 4 HOH HOH 441 A HOH 442 4 HOH HOH 442 A HOH 443 4 HOH HOH 443 A HOH 444 4 HOH HOH 444 A HOH 445 4 HOH HOH 445 A HOH 446 4 HOH HOH 446 A HOH 447 4 HOH HOH 447 A HOH 448 4 HOH HOH 448 A HOH 449 4 HOH HOH 449 A HOH 450 4 HOH HOH 450 A HOH 451 4 HOH HOH 451 A HOH 452 4 HOH HOH 452 A HOH 453 4 HOH HOH 453 A HOH 454 4 HOH HOH 454 A HOH 455 4 HOH HOH 455 A HOH 456 4 HOH HOH 456 A HOH 457 4 HOH HOH 457 A HOH 458 4 HOH HOH 458 A HOH 459 4 HOH HOH 459 A HOH 460 4 HOH HOH 460 A HOH 461 4 HOH HOH 461 A HOH 462 4 HOH HOH 462 A HOH 463 4 HOH HOH 463 A HOH 464 4 HOH HOH 464 A HOH 465 4 HOH HOH 465 A HOH 466 4 HOH HOH 466 A HOH 467 4 HOH HOH 467 A HOH 468 4 HOH HOH 468 A HOH 469 4 HOH HOH 469 A HOH 470 4 HOH HOH 470 A HOH 471 4 HOH HOH 471 A HOH 472 4 HOH HOH 472 A HOH 473 4 HOH HOH 473 A HOH 474 4 HOH HOH 474 A HOH 475 4 HOH HOH 475 A HOH 476 4 HOH HOH 476 A HOH 477 4 HOH HOH 477 A HOH 478 4 HOH HOH 478 A HOH 479 4 HOH HOH 479 A HOH 480 4 HOH HOH 480 A HOH 481 4 HOH HOH 481 A HOH 482 4 HOH HOH 482 A HOH 483 4 HOH HOH 483 A HOH 484 4 HOH HOH 484 A HOH 485 4 HOH HOH 485 A HOH 486 4 HOH HOH 486 A HOH 487 4 HOH HOH 487 A HOH 488 4 HOH HOH 488 A HOH 489 4 HOH HOH 489 A HOH 490 4 HOH HOH 490 A HOH 491 4 HOH HOH 491 A HOH 492 4 HOH HOH 492 A HOH 493 4 HOH HOH 493 A HOH 494 4 HOH HOH 494 A HOH 495 4 HOH HOH 495 A HOH 496 4 HOH HOH 496 A HOH 497 4 HOH HOH 497 A HOH 498 4 HOH HOH 498 A HOH 499 4 HOH HOH 499 A HOH 500 4 HOH HOH 500 A HOH 501 4 HOH HOH 501 A HOH 502 4 HOH HOH 502 A HOH 503 4 HOH HOH 503 A HOH 504 4 HOH HOH 504 A HOH 505 4 HOH HOH 505 A HOH 506 4 HOH HOH 506 A HOH 507 4 HOH HOH 507 A HOH 508 4 HOH HOH 508 A HOH 509 4 HOH HOH 509 A HOH 510 4 HOH HOH 510 A HOH 511 4 HOH HOH 511 A HOH 512 4 HOH HOH 512 A HOH 513 4 HOH HOH 513 A HOH 514 4 HOH HOH 514 A HOH 515 4 HOH HOH 515 A HOH 516 4 HOH HOH 516 A HOH 517 4 HOH HOH 517 A HOH 518 4 HOH HOH 518 A HOH 519 4 HOH HOH 519 A HOH 520 4 HOH HOH 520 A HOH 521 4 HOH HOH 521 A HOH 522 4 HOH HOH 522 A HOH 523 4 HOH HOH 523 A HOH 524 4 HOH HOH 524 A HOH 525 4 HOH HOH 525 A HOH 526 4 HOH HOH 526 A HOH 527 4 HOH HOH 527 A HOH 528 4 HOH HOH 528 A HOH 529 4 HOH HOH 529 A HOH 530 4 HOH HOH 530 A HOH 531 4 HOH HOH 531 A HOH 532 4 HOH HOH 532 A HOH 533 4 HOH HOH 533 A HOH 534 4 HOH HOH 534 A HOH 535 4 HOH HOH 535 A HOH 536 4 HOH HOH 536 A HOH 537 4 HOH HOH 537 A HOH 538 4 HOH HOH 538 A HOH 539 4 HOH HOH 539 A HOH 540 4 HOH HOH 540 A HOH 541 4 HOH HOH 541 A HOH 542 4 HOH HOH 542 A HOH 543 4 HOH HOH 543 A HOH 544 4 HOH HOH 544 A HOH 545 4 HOH HOH 545 A HOH 546 4 HOH HOH 546 A HOH 547 4 HOH HOH 547 A HOH 548 4 HOH HOH 548 A HOH 549 4 HOH HOH 549 A HOH 550 4 HOH HOH 550 A HOH 551 4 HOH HOH 551 A HOH 552 4 HOH HOH 552 A HOH 553 4 HOH HOH 553 A HOH 554 4 HOH HOH 554 A HOH 555 4 HOH HOH 555 A HOH 556 4 HOH HOH 556 A HOH 557 4 HOH HOH 557 A HOH 558 4 HOH HOH 558 A HOH 559 4 HOH HOH 559 A HOH 560 4 HOH HOH 560 A HOH 561 4 HOH HOH 561 A HOH 562 4 HOH HOH 562 A HOH 563 4 HOH HOH 563 A HOH 564 4 HOH HOH 564 A HOH 565 4 HOH HOH 565 A HOH 566 4 HOH HOH 566 A HOH 567 4 HOH HOH 567 A MET 1 n 1 MET 1 A ASN 2 n 2 ASN 2 A LEU 3 n 3 LEU 3 A VAL 4 n 4 VAL 4 A LEU 5 n 5 LEU 5 A MET 6 n 6 MET 6 A GLY 7 n 7 GLY 7 A LEU 8 n 8 LEU 8 A PRO 9 n 9 PRO 9 A GLY 10 n 10 GLY 10 A ALA 11 n 11 ALA 11 A GLY 12 n 12 GLY 12 A LYS 13 n 13 LYS 13 A GLY 14 n 14 GLY 14 A THR 15 n 15 THR 15 A GLN 16 n 16 GLN 16 A ALA 17 n 17 ALA 17 A GLU 18 n 18 GLU 18 A LYS 19 n 19 LYS 19 A ILE 20 n 20 ILE 20 A VAL 21 n 21 VAL 21 A ALA 22 n 22 ALA 22 A ALA 23 n 23 ALA 23 A TYR 24 n 24 TYR 24 A GLY 25 n 25 GLY 25 A ILE 26 n 26 ILE 26 A PRO 27 n 27 PRO 27 A HIS 28 n 28 HIS 28 A ILE 29 n 29 ILE 29 A SER 30 n 30 SER 30 A THR 31 n 31 THR 31 A GLY 32 n 32 GLY 32 A ASP 33 n 33 ASP 33 A MET 34 n 34 MET 34 A PHE 35 n 35 PHE 35 A ARG 36 n 36 ARG 36 A ALA 37 n 37 ALA 37 A ALA 38 n 38 ALA 38 A MET 39 n 39 MET 39 A LYS 40 n 40 LYS 40 A GLU 41 n 41 GLU 41 A GLY 42 n 42 GLY 42 A THR 43 n 43 THR 43 A PRO 44 n 44 PRO 44 A LEU 45 n 45 LEU 45 A GLY 46 n 46 GLY 46 A LEU 47 n 47 LEU 47 A GLN 48 n 48 GLN 48 A ALA 49 n 49 ALA 49 A LYS 50 n 50 LYS 50 A GLN 51 n 51 GLN 51 A TYR 52 n 52 TYR 52 A MET 53 n 53 MET 53 A ASP 54 n 54 ASP 54 A ARG 55 n 55 ARG 55 A GLY 56 n 56 GLY 56 A ASP 57 n 57 ASP 57 A LEU 58 n 58 LEU 58 A VAL 59 n 59 VAL 59 A PRO 60 n 60 PRO 60 A ASP 61 n 61 ASP 61 A GLU 62 n 62 GLU 62 A VAL 63 n 63 VAL 63 A THR 64 n 64 THR 64 A ILE 65 n 65 ILE 65 A GLY 66 n 66 GLY 66 A ILE 67 n 67 ILE 67 A VAL 68 n 68 VAL 68 A ARG 69 n 69 ARG 69 A GLU 70 n 70 GLU 70 A ARG 71 n 71 ARG 71 A LEU 72 n 72 LEU 72 A SER 73 n 73 SER 73 A LYS 74 n 74 LYS 74 A ASP 75 n 75 ASP 75 A ASP 76 n 76 ASP 76 A CYS 77 n 77 CYS 77 A GLN 78 n 78 GLN 78 A ASN 79 n 79 ASN 79 A GLY 80 n 80 GLY 80 A PHE 81 n 81 PHE 81 A LEU 82 n 82 LEU 82 A LEU 83 n 83 LEU 83 A ASP 84 n 84 ASP 84 A GLY 85 n 85 GLY 85 A PHE 86 n 86 PHE 86 A PRO 87 n 87 PRO 87 A ARG 88 n 88 ARG 88 A THR 89 n 89 THR 89 A VAL 90 n 90 VAL 90 A ALA 91 n 91 ALA 91 A GLN 92 n 92 GLN 92 A ALA 93 n 93 ALA 93 A GLU 94 n 94 GLU 94 A ALA 95 n 95 ALA 95 A LEU 96 n 96 LEU 96 A GLU 97 n 97 GLU 97 A THR 98 n 98 THR 98 A MET 99 n 99 MET 99 A LEU 100 n 100 LEU 100 A ALA 101 n 101 ALA 101 A ASP 102 n 102 ASP 102 A ILE 103 n 103 ILE 103 A GLY 104 n 104 GLY 104 A ARG 105 n 105 ARG 105 A LYS 106 n 106 LYS 106 A LEU 107 n 107 LEU 107 A ASP 108 n 108 ASP 108 A TYR 109 n 109 TYR 109 A VAL 110 n 110 VAL 110 A ILE 111 n 111 ILE 111 A HIS 112 n 112 HIS 112 A ILE 113 n 113 ILE 113 A ASP 114 n 114 ASP 114 A VAL 115 n 115 VAL 115 A ARG 116 n 116 ARG 116 A GLN 117 n 117 GLN 117 A ASP 118 n 118 ASP 118 A VAL 119 n 119 VAL 119 A LEU 120 n 120 LEU 120 A MET 121 n 121 MET 121 A GLU 122 n 122 GLU 122 A ARG 123 n 123 ARG 123 A LEU 124 n 124 LEU 124 A THR 125 n 125 THR 125 A GLY 126 n 126 GLY 126 A ARG 127 n 127 ARG 127 A ARG 128 n 128 ARG 128 A ILE 129 n 129 ILE 129 A CYS 130 n 130 CYS 130 A ARG 131 n 131 ARG 131 A ASN 132 n 132 ASN 132 A CYS 133 n 133 CYS 133 A GLY 134 n 134 GLY 134 A ALA 135 n 135 ALA 135 A THR 136 n 136 THR 136 A TYR 137 n 137 TYR 137 A HIS 138 n 138 HIS 138 A LEU 139 n 139 LEU 139 A ILE 140 n 140 ILE 140 A PHE 141 n 141 PHE 141 A HIS 142 n 142 HIS 142 A PRO 143 n 143 PRO 143 A PRO 144 n 144 PRO 144 A ALA 145 n 145 ALA 145 A LYS 146 n 146 LYS 146 A PRO 147 n 147 PRO 147 A GLY 148 n 148 GLY 148 A VAL 149 n 149 VAL 149 A CYS 150 n 150 CYS 150 A ASP 151 n 151 ASP 151 A LYS 152 n 152 LYS 152 A CYS 153 n 153 CYS 153 A GLY 154 n 154 GLY 154 A GLY 155 n 155 GLY 155 A GLU 156 n 156 GLU 156 A LEU 157 n 157 LEU 157 A TYR 158 n 158 TYR 158 A GLN 159 n 159 GLN 159 A ARG 160 n 160 ARG 160 A ALA 161 n 161 ALA 161 A ASP 162 n 162 ASP 162 A ASP 163 n 163 ASP 163 A ASN 164 n 164 ASN 164 A GLU 165 n 165 GLU 165 A ALA 166 n 166 ALA 166 A THR 167 n 167 THR 167 A VAL 168 n 168 VAL 168 A ALA 169 n 169 ALA 169 A ASN 170 n 170 ASN 170 A ARG 171 n 171 ARG 171 A LEU 172 n 172 LEU 172 A GLU 173 n 173 GLU 173 A VAL 174 n 174 VAL 174 A ASN 175 n 175 ASN 175 A MET 176 n 176 MET 176 A LYS 177 n 177 LYS 177 A GLN 178 n 178 GLN 178 A MET 179 n 179 MET 179 A LYS 180 n 180 LYS 180 A PRO 181 n 181 PRO 181 A LEU 182 n 182 LEU 182 A VAL 183 n 183 VAL 183 A ASP 184 n 184 ASP 184 A PHE 185 n 185 PHE 185 A TYR 186 n 186 TYR 186 A GLU 187 n 187 GLU 187 A GLN 188 n 188 GLN 188 A LYS 189 n 189 LYS 189 A GLY 190 n 190 GLY 190 A TYR 191 n 191 TYR 191 A LEU 192 n 192 LEU 192 A ARG 193 n 193 ARG 193 A ASN 194 n 194 ASN 194 A ILE 195 n 195 ILE 195 A ASN 196 n 196 ASN 196 A GLY 197 n 197 GLY 197 A GLU 198 n 198 GLU 198 A GLN 199 n 199 GLN 199 A ASP 200 n 200 ASP 200 A MET 201 n 201 MET 201 A GLU 202 n 202 GLU 202 A LYS 203 n 203 LYS 203 A VAL 204 n 204 VAL 204 A PHE 205 n 205 PHE 205 A ALA 206 n 206 ALA 206 A ASP 207 n 207 ASP 207 A ILE 208 n 208 ILE 208 A ARG 209 n 209 ARG 209 A GLU 210 n 210 GLU 210 A LEU 211 n 211 LEU 211 A LEU 212 n 212 LEU 212 A GLY 213 n 213 GLY 213 A GLY 214 n 214 GLY 214 A LEU 215 n 215 LEU 215 A ALA 216 n 216 ALA 216 A ARG 217 n 217 ARG 217 A author_defined_assembly 1 monomeric A CYS 130 A SG CYS 130 1_555 A ZN 219 B ZN ZN 1_555 A CYS 133 A SG CYS 133 1_555 114.0 A CYS 130 A SG CYS 130 1_555 A ZN 219 B ZN ZN 1_555 A CYS 150 A SG CYS 150 1_555 106.2 A CYS 133 A SG CYS 133 1_555 A ZN 219 B ZN ZN 1_555 A CYS 150 A SG CYS 150 1_555 106.6 A CYS 130 A SG CYS 130 1_555 A ZN 219 B ZN ZN 1_555 A CYS 153 A SG CYS 153 1_555 98.0 A CYS 133 A SG CYS 133 1_555 A ZN 219 B ZN ZN 1_555 A CYS 153 A SG CYS 153 1_555 118.5 A CYS 150 A SG CYS 150 1_555 A ZN 219 B ZN ZN 1_555 A CYS 153 A SG CYS 153 1_555 112.8 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ARG 193 A O ARG 193 A N VAL 110 A N VAL 110 A O TYR 109 A O TYR 109 A N VAL 4 A N VAL 4 A O LEU 3 A O LEU 3 A N PHE 81 A N PHE 81 A O LEU 82 A O LEU 82 A N PRO 27 A N PRO 27 A O ARG 128 A O ARG 128 A N TYR 137 A N TYR 137 1 A ASP 108 -92.11 -60.28 1 A HIS 142 -161.64 78.70 1 A GLU 198 -95.00 58.92 14.8 0.2160000 0.1730000 0.1730000 1.6 10.0 1553 23448 10. 97. RANDOM 1 FREE R 0. MOLECULAR REPLACEMENT YEAST ADENYLATE KINASE 1.6 10.0 268 2404 61 0 2075 0.011 1.978 22.62 1.417 1.6 10.0 1ZIN 23448 0.0 0.0970000 1 97. model building X-PLOR 3.1 refinement X-PLOR 3.1 data reduction DENZO data scaling SCALEPACK phasing X-PLOR 3.1 ADENYLATE KINASE WITH BOUND AP5A 1 N N 2 N N 3 N N 4 N N A LYS 13 A LYS 13 HELX_P A TYR 24 A TYR 24 1 1 12 A THR 31 A THR 31 HELX_P A GLU 41 A GLU 41 1 2 11 A PRO 44 A PRO 44 HELX_P A ARG 55 A ARG 55 1 3 12 A ASP 61 A ASP 61 HELX_P A LEU 72 A LEU 72 1 4 12 A ASP 75 A ASP 75 HELX_P A CYS 77 A CYS 77 5 5 3 A VAL 90 A VAL 90 HELX_P A ILE 103 A ILE 103 1 6 14 A GLN 117 A GLN 117 HELX_P A THR 125 A THR 125 1 7 9 A ALA 161 A ALA 161 HELX_P A ASP 163 A ASP 163 5 8 3 A GLU 165 A GLU 165 HELX_P A LYS 189 A LYS 189 1 9 25 A MET 201 A MET 201 HELX_P A LEU 215 A LEU 215 1 10 15 metalc 2.335 A CYS 130 A SG CYS 130 1_555 A ZN 219 B ZN ZN 1_555 metalc 2.297 A CYS 133 A SG CYS 133 1_555 A ZN 219 B ZN ZN 1_555 metalc 2.319 A CYS 150 A SG CYS 150 1_555 A ZN 219 B ZN ZN 1_555 metalc 2.329 A CYS 153 A SG CYS 153 1_555 A ZN 219 B ZN ZN 1_555 PHOSPHOTRANSFERASE PHOSPHOTRANSFERASE, ZINC FINGER A PHE 86 A PHE 86 1 A PRO 87 A PRO 87 0.32 KAD_BACST UNP 1 1 P27142 MNLVLMGLPGAGKGTQAEKIVAAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPDEVTIGIVRERLSKDDCQNG FLLDGFPRTVAQAEALETMLADIGRKLDYVIHIDVRQDVLMERLTGRRICRNCGATYHLIFHPPAKPGVCDKCGGELYQR ADDNEATVANRLEVNMKQMKPLVDFYEQKGYLRNINGEQDMEKVFADIRELLGGLAR 1 217 1ZIN 1 217 P27142 A 1 1 217 5 2 parallel parallel parallel parallel anti-parallel A LEU 192 A LEU 192 A ASN 196 A ASN 196 A TYR 109 A TYR 109 A ASP 114 A ASP 114 A ASN 2 A ASN 2 A MET 6 A MET 6 A PHE 81 A PHE 81 A ASP 84 A ASP 84 A PRO 27 A PRO 27 A SER 30 A SER 30 A ARG 127 A ARG 127 A ILE 129 A ILE 129 A THR 136 A THR 136 A HIS 138 A HIS 138 BINDING SITE FOR RESIDUE ZN A 219 A ZN 219 Software 4 BINDING SITE FOR RESIDUE AP5 A 218 A AP5 218 Software 36 A CYS 130 A CYS 130 4 1_555 A CYS 133 A CYS 133 4 1_555 A CYS 150 A CYS 150 4 1_555 A CYS 153 A CYS 153 4 1_555 A PRO 9 A PRO 9 36 1_555 A GLY 10 A GLY 10 36 1_555 A ALA 11 A ALA 11 36 1_555 A GLY 12 A GLY 12 36 1_555 A LYS 13 A LYS 13 36 1_555 A GLY 14 A GLY 14 36 1_555 A THR 15 A THR 15 36 1_555 A THR 31 A THR 31 36 1_555 A PHE 35 A PHE 35 36 1_555 A ARG 36 A ARG 36 36 1_555 A MET 53 A MET 53 36 1_555 A ASP 57 A ASP 57 36 1_555 A VAL 59 A VAL 59 36 1_555 A THR 64 A THR 64 36 1_555 A GLY 85 A GLY 85 36 1_555 A ARG 88 A ARG 88 36 1_555 A GLN 92 A GLN 92 36 1_555 A ARG 123 A ARG 123 36 1_555 A LEU 124 A LEU 124 36 1_555 A ARG 127 A ARG 127 36 1_555 A TYR 137 A TYR 137 36 1_555 A HIS 138 A HIS 138 36 1_555 A HIS 142 A HIS 142 36 1_555 A ARG 160 A ARG 160 36 1_555 A ARG 171 A ARG 171 36 1_555 A GLN 199 A GLN 199 36 1_555 A MET 201 A MET 201 36 1_555 A HOH 300 D HOH 36 1_555 A HOH 301 D HOH 36 1_555 A HOH 306 D HOH 36 1_555 A HOH 309 D HOH 36 1_555 A HOH 311 D HOH 36 1_555 A HOH 352 D HOH 36 1_555 A HOH 355 D HOH 36 1_555 A HOH 426 D HOH 36 1_555 A HOH 532 D HOH 36 1_555 4 P 1 21 1