0.010927 0.006309 0.000000 0.000000 0.012617 0.000000 0.000000 0.000000 0.007637 0.00000 0.00000 0.00000 Doucleff, M. Chen, B. Maris, A.E. Wemmer, D.E. Kondrashkina, E. Nixon, B.T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 91.517 91.517 130.942 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C4 H8 N O7 P 213.083 n ASPARTYL PHOSPHATE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N O N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N N N 108 N C N 109 N C N 110 N O N 111 N O N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N N N 118 S C N 119 N C N 120 N O N 121 N C Y 122 N C Y 123 N N Y 124 N C Y 125 N C Y 126 N N N 127 N O N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N O N 139 N H N 140 N H N 141 N N N 142 S C N 143 N C N 144 N O N 145 S C N 146 N C N 147 N C N 148 N C N 149 N O N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N N N 164 S C N 165 N C N 166 N O N 167 N C N 168 N C N 169 N C N 170 N C N 171 N O N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N N N 186 S C N 187 N C N 188 N O N 189 N C N 190 N C N 191 N C N 192 N C N 193 N N N 194 N O N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N N N 211 S C N 212 N C N 213 N O N 214 N C N 215 N C N 216 N S N 217 N C N 218 N O N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N MG N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N O N 238 N O N 239 N P N 240 N O N 241 N O N 242 N O N 243 N O N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N N N 253 S C N 254 N C N 255 N O N 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C Y 261 N C Y 262 N C N 263 N O N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N N N 276 S C N 277 N C N 278 N O N 279 N C N 280 N C N 281 N C N 282 N O N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N N N 293 S C N 294 N C N 295 N O N 296 N C N 297 N O N 298 N O N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N N N 307 S C N 308 N C N 309 N O N 310 R C N 311 N O N 312 N C N 313 N O N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N N N 324 S C N 325 N C N 326 N O N 327 N C Y 328 N C Y 329 N C Y 330 N C Y 331 N N Y 332 N C Y 333 N C Y 334 N C Y 335 N C Y 336 N C N 337 N O N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N N N 351 S C N 352 N C N 353 N O N 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C Y 359 N C Y 360 N C N 361 N O N 362 N O N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N N N 375 S C N 376 N C N 377 N O N 378 N C N 379 N C N 380 N C N 381 N O N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing Y 121 N sing Y 122 N doub Y 123 N doub N 124 N sing Y 125 N sing N 126 N sing Y 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N doub N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N doub N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N doub N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N doub N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N doub N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N doub N 245 N sing N 246 N sing N 247 N sing N 248 N sing Y 249 N doub Y 250 N sing Y 251 N sing N 252 N sing Y 253 N doub N 254 N sing Y 255 N doub N 256 N sing Y 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N doub N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N doub N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N doub N 314 N sing N 315 N sing N 316 N sing N 317 N sing Y 318 N doub Y 319 N sing Y 320 N sing N 321 N sing Y 322 N doub Y 323 N sing Y 324 N sing N 325 N sing Y 326 N sing Y 327 N doub N 328 N sing Y 329 N doub N 330 N sing Y 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N doub N 342 N sing N 343 N sing N 344 N sing N 345 N sing Y 346 N doub Y 347 N sing Y 348 N sing N 349 N sing Y 350 N doub N 351 N sing Y 352 N doub N 353 N sing Y 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N doub N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 353 242 255 10.1016/j.jmb.2005.08.003 16169010 Negative regulation of AAA + ATPase assembly by two component receiver domains: a transcription activation mechanism that is conserved in mesophilic and extremely hyperthermophilic bacteria 2005 10.2210/pdb1zy2/pdb pdb_00001zy2 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2003-07-23 ADSC QUANTUM 4 DOUBLE CRYSTAL SINGLE WAVELENGTH M x-ray 1 1.100 1.0 8.3.1 ALS 1.100 SYNCHROTRON ALS BEAMLINE 8.3.1 17522.387 transcriptional regulator NtrC1 2 man polymer 24.305 MAGNESIUM ION 1 syn non-polymer 18.015 water 1 nat water NTRC no yes MNVLVIEDDKVFRGLLEEYLSMKGIKVESAERGKEAYKLLSEKHFNVVLL(PHD)LLLPDVNGLEILKWIKERSPETEVI VITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHRKLRKENELLRREKDLKEKLAAALEHHHHHHH MNVLVIEDDKVFRGLLEEYLSMKGIKVESAERGKEAYKLLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITG HGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHRKLRKENELLRREKDLKEKLAAALEHHHHHHH A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Aquifex Escherichia sample NtrC1 63363 Aquifex aeolicus 562 Escherichia coli BL21/DE3 with Rosetta pLys plasmid plasmid PET21a 1 5.32 76.68 VAPOR DIFFUSION, HANGING DROP 5.5 PEG-3350, AMMONIUM CHLORIDE, GLYCEROL, CITRIC ACID, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 310K 310 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2005-08-16 1 1 2008-04-30 1 2 2011-07-13 1 3 2023-08-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2005-06-09 REL REL MG MAGNESIUM ION HOH water 1NY5 PDB ENTRY 1NY5 RESIDUES 1-124 OF CHAIN A PDB experimental model MG 142 2 MG MG 151 A HOH 141 3 HOH HOH 152 A MET 1 n 1 MET 1 A ASN 2 n 2 ASN 2 A VAL 3 n 3 VAL 3 A LEU 4 n 4 LEU 4 A VAL 5 n 5 VAL 5 A ILE 6 n 6 ILE 6 A GLU 7 n 7 GLU 7 A ASP 8 n 8 ASP 8 A ASP 9 n 9 ASP 9 A LYS 10 n 10 LYS 10 A VAL 11 n 11 VAL 11 A PHE 12 n 12 PHE 12 A ARG 13 n 13 ARG 13 A GLY 14 n 14 GLY 14 A LEU 15 n 15 LEU 15 A LEU 16 n 16 LEU 16 A GLU 17 n 17 GLU 17 A GLU 18 n 18 GLU 18 A TYR 19 n 19 TYR 19 A LEU 20 n 20 LEU 20 A SER 21 n 21 SER 21 A MET 22 n 22 MET 22 A LYS 23 n 23 LYS 23 A GLY 24 n 24 GLY 24 A ILE 25 n 25 ILE 25 A LYS 26 n 26 LYS 26 A VAL 27 n 27 VAL 27 A GLU 28 n 28 GLU 28 A SER 29 n 29 SER 29 A ALA 30 n 30 ALA 30 A GLU 31 n 31 GLU 31 A ARG 32 n 32 ARG 32 A GLY 33 n 33 GLY 33 A LYS 34 n 34 LYS 34 A GLU 35 n 35 GLU 35 A ALA 36 n 36 ALA 36 A TYR 37 n 37 TYR 37 A LYS 38 n 38 LYS 38 A LEU 39 n 39 LEU 39 A LEU 40 n 40 LEU 40 A SER 41 n 41 SER 41 A GLU 42 n 42 GLU 42 A LYS 43 n 43 LYS 43 A HIS 44 n 44 HIS 44 A PHE 45 n 45 PHE 45 A ASN 46 n 46 ASN 46 A VAL 47 n 47 VAL 47 A VAL 48 n 48 VAL 48 A LEU 49 n 49 LEU 49 A LEU 50 n 50 LEU 50 A PHD 51 n 51 PHD 51 A LEU 52 n 52 LEU 52 A LEU 53 n 53 LEU 53 A LEU 54 n 54 LEU 54 A PRO 55 n 55 PRO 55 A ASP 56 n 56 ASP 56 A VAL 57 n 57 VAL 57 A ASN 58 n 58 ASN 58 A GLY 59 n 59 GLY 59 A LEU 60 n 60 LEU 60 A GLU 61 n 61 GLU 61 A ILE 62 n 62 ILE 62 A LEU 63 n 63 LEU 63 A LYS 64 n 64 LYS 64 A TRP 65 n 65 TRP 65 A ILE 66 n 66 ILE 66 A LYS 67 n 67 LYS 67 A GLU 68 n 68 GLU 68 A ARG 69 n 69 ARG 69 A SER 70 n 70 SER 70 A PRO 71 n 71 PRO 71 A GLU 72 n 72 GLU 72 A THR 73 n 73 THR 73 A GLU 74 n 74 GLU 74 A VAL 75 n 75 VAL 75 A ILE 76 n 76 ILE 76 A VAL 77 n 77 VAL 77 A ILE 78 n 78 ILE 78 A THR 79 n 79 THR 79 A GLY 80 n 80 GLY 80 A HIS 81 n 81 HIS 81 A GLY 82 n 82 GLY 82 A THR 83 n 83 THR 83 A ILE 84 n 84 ILE 84 A LYS 85 n 85 LYS 85 A THR 86 n 86 THR 86 A ALA 87 n 87 ALA 87 A VAL 88 n 88 VAL 88 A GLU 89 n 89 GLU 89 A ALA 90 n 90 ALA 90 A MET 91 n 91 MET 91 A LYS 92 n 92 LYS 92 A MET 93 n 93 MET 93 A GLY 94 n 94 GLY 94 A ALA 95 n 95 ALA 95 A TYR 96 n 96 TYR 96 A ASP 97 n 97 ASP 97 A PHE 98 n 98 PHE 98 A LEU 99 n 99 LEU 99 A THR 100 n 100 THR 100 A LYS 101 n 101 LYS 101 A PRO 102 n 102 PRO 102 A CYS 103 n 103 CYS 103 A MET 104 n 104 MET 104 A LEU 105 n 105 LEU 105 A GLU 106 n 106 GLU 106 A GLU 107 n 107 GLU 107 A ILE 108 n 108 ILE 108 A GLU 109 n 109 GLU 109 A LEU 110 n 110 LEU 110 A THR 111 n 111 THR 111 A ILE 112 n 112 ILE 112 A ASN 113 n 113 ASN 113 A LYS 114 n 114 LYS 114 A ALA 115 n 115 ALA 115 A ILE 116 n 116 ILE 116 A GLU 117 n 117 GLU 117 A HIS 118 n 118 HIS 118 A ARG 119 n 119 ARG 119 A LYS 120 n 120 LYS 120 A LEU 121 n 121 LEU 121 A ARG 122 n 122 ARG 122 A LYS 123 n 123 LYS 123 A GLU 124 n 124 GLU 124 A ASN 125 n 125 ASN 125 A GLU 126 n 126 GLU 126 A LEU 127 n 127 LEU 127 A LEU 128 n 128 LEU 128 A ARG 129 n 129 ARG 129 A ARG 130 n 130 ARG 130 A GLU 131 n 131 GLU 131 A LYS 132 n 132 LYS 132 A ASP 133 n 133 ASP 133 A ALA 134 n 134 LEU 134 A ALA 135 n 135 LYS 135 A ALA 136 n 136 GLU 136 A ALA 137 n 137 LYS 137 A ALA 138 n 138 LEU 138 A ALA 139 n 139 ALA 139 A ALA 140 n 140 ALA 140 A n 141 141 A n 142 142 A n 143 143 A n 144 144 A n 145 145 A n 146 146 A n 147 147 A n 148 148 A n 149 149 A n 150 150 A MET 1 n 1 MET 1 B ASN 2 n 2 ASN 2 B VAL 3 n 3 VAL 3 B LEU 4 n 4 LEU 4 B VAL 5 n 5 VAL 5 B ILE 6 n 6 ILE 6 B GLU 7 n 7 GLU 7 B ASP 8 n 8 ASP 8 B ASP 9 n 9 ASP 9 B LYS 10 n 10 LYS 10 B VAL 11 n 11 VAL 11 B PHE 12 n 12 PHE 12 B ARG 13 n 13 ARG 13 B GLY 14 n 14 GLY 14 B LEU 15 n 15 LEU 15 B LEU 16 n 16 LEU 16 B GLU 17 n 17 GLU 17 B GLU 18 n 18 GLU 18 B TYR 19 n 19 TYR 19 B LEU 20 n 20 LEU 20 B SER 21 n 21 SER 21 B MET 22 n 22 MET 22 B LYS 23 n 23 LYS 23 B GLY 24 n 24 GLY 24 B ILE 25 n 25 ILE 25 B LYS 26 n 26 LYS 26 B VAL 27 n 27 VAL 27 B GLU 28 n 28 GLU 28 B SER 29 n 29 SER 29 B ALA 30 n 30 ALA 30 B GLU 31 n 31 GLU 31 B ARG 32 n 32 ARG 32 B GLY 33 n 33 GLY 33 B LYS 34 n 34 LYS 34 B GLU 35 n 35 GLU 35 B ALA 36 n 36 ALA 36 B TYR 37 n 37 TYR 37 B LYS 38 n 38 LYS 38 B LEU 39 n 39 LEU 39 B LEU 40 n 40 LEU 40 B SER 41 n 41 SER 41 B GLU 42 n 42 GLU 42 B LYS 43 n 43 LYS 43 B HIS 44 n 44 HIS 44 B PHE 45 n 45 PHE 45 B ASN 46 n 46 ASN 46 B VAL 47 n 47 VAL 47 B VAL 48 n 48 VAL 48 B LEU 49 n 49 LEU 49 B LEU 50 n 50 LEU 50 B PHD 51 n 51 PHD 51 B LEU 52 n 52 LEU 52 B LEU 53 n 53 LEU 53 B LEU 54 n 54 LEU 54 B PRO 55 n 55 PRO 55 B ASP 56 n 56 ASP 56 B VAL 57 n 57 VAL 57 B ASN 58 n 58 ASN 58 B GLY 59 n 59 GLY 59 B LEU 60 n 60 LEU 60 B GLU 61 n 61 GLU 61 B ILE 62 n 62 ILE 62 B LEU 63 n 63 LEU 63 B LYS 64 n 64 LYS 64 B TRP 65 n 65 TRP 65 B ILE 66 n 66 ILE 66 B LYS 67 n 67 LYS 67 B GLU 68 n 68 GLU 68 B ARG 69 n 69 ARG 69 B SER 70 n 70 SER 70 B PRO 71 n 71 PRO 71 B GLU 72 n 72 GLU 72 B THR 73 n 73 THR 73 B GLU 74 n 74 GLU 74 B VAL 75 n 75 VAL 75 B ILE 76 n 76 ILE 76 B VAL 77 n 77 VAL 77 B ILE 78 n 78 ILE 78 B THR 79 n 79 THR 79 B GLY 80 n 80 GLY 80 B HIS 81 n 81 HIS 81 B GLY 82 n 82 GLY 82 B THR 83 n 83 THR 83 B ILE 84 n 84 ILE 84 B LYS 85 n 85 LYS 85 B THR 86 n 86 THR 86 B ALA 87 n 87 ALA 87 B VAL 88 n 88 VAL 88 B GLU 89 n 89 GLU 89 B ALA 90 n 90 ALA 90 B MET 91 n 91 MET 91 B LYS 92 n 92 LYS 92 B MET 93 n 93 MET 93 B GLY 94 n 94 GLY 94 B ALA 95 n 95 ALA 95 B TYR 96 n 96 TYR 96 B ASP 97 n 97 ASP 97 B PHE 98 n 98 PHE 98 B LEU 99 n 99 LEU 99 B THR 100 n 100 THR 100 B LYS 101 n 101 LYS 101 B PRO 102 n 102 PRO 102 B CYS 103 n 103 CYS 103 B MET 104 n 104 MET 104 B LEU 105 n 105 LEU 105 B GLU 106 n 106 GLU 106 B GLU 107 n 107 GLU 107 B ILE 108 n 108 ILE 108 B GLU 109 n 109 GLU 109 B LEU 110 n 110 LEU 110 B THR 111 n 111 THR 111 B ILE 112 n 112 ILE 112 B ASN 113 n 113 ASN 113 B LYS 114 n 114 LYS 114 B ALA 115 n 115 ALA 115 B ILE 116 n 116 ILE 116 B GLU 117 n 117 GLU 117 B HIS 118 n 118 HIS 118 B ARG 119 n 119 ARG 119 B LYS 120 n 120 LYS 120 B LEU 121 n 121 LEU 121 B ARG 122 n 122 ARG 122 B LYS 123 n 123 LYS 123 B GLU 124 n 124 GLU 124 B ASN 125 n 125 ASN 125 B n 126 126 B n 127 127 B n 128 128 B n 129 129 B n 130 130 B n 131 131 B n 132 132 B n 133 133 B n 134 134 B n 135 135 B n 136 136 B n 137 137 B n 138 138 B n 139 139 B n 140 140 B n 141 141 B n 142 142 B n 143 143 B n 144 144 B n 145 145 B n 146 146 B n 147 147 B n 148 148 B n 149 149 B n 150 150 B author_defined_assembly 2 dimeric A ASP 8 A OD2 ASP 8 1_555 A MG 151 C MG MG 1_555 A PHD 51 A OP2 PHD 51 1_555 116.4 A PHD 51 ASPARTYL PHOSPHATE A PHD 51 ASP B PHD 51 ASPARTYL PHOSPHATE B PHD 51 ASP 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O LYS 26 A O LYS 26 A N VAL 3 A N VAL 3 A N LEU 4 A N LEU 4 A O VAL 47 A O VAL 47 A N VAL 48 A N VAL 48 A O ILE 76 A O ILE 76 A N VAL 77 A N VAL 77 A O LEU 99 A O LEU 99 B O GLU 28 B O GLU 28 B N VAL 3 B N VAL 3 B N LEU 4 B N LEU 4 B O LEU 49 B O LEU 49 B N VAL 48 B N VAL 48 B O ILE 76 B O ILE 76 B N THR 79 B N THR 79 B O LEU 99 B O LEU 99 1 A CB ARG 119 A CB ARG 119 0 Y 1 A CG ARG 119 A CG ARG 119 0 Y 1 A CD ARG 119 A CD ARG 119 0 Y 1 A NE ARG 119 A NE ARG 119 0 Y 1 A CZ ARG 119 A CZ ARG 119 0 Y 1 A NH1 ARG 119 A NH1 ARG 119 0 Y 1 A NH2 ARG 119 A NH2 ARG 119 0 Y 1 A CG LEU 134 A CG LEU 134 1 Y 1 A CD1 LEU 134 A CD1 LEU 134 1 Y 1 A CD2 LEU 134 A CD2 LEU 134 1 Y 1 A CG LYS 135 A CG LYS 135 1 Y 1 A CD LYS 135 A CD LYS 135 1 Y 1 A CE LYS 135 A CE LYS 135 1 Y 1 A NZ LYS 135 A NZ LYS 135 1 Y 1 A CG GLU 136 A CG GLU 136 1 Y 1 A CD GLU 136 A CD GLU 136 1 Y 1 A OE1 GLU 136 A OE1 GLU 136 1 Y 1 A OE2 GLU 136 A OE2 GLU 136 1 Y 1 A CG LYS 137 A CG LYS 137 1 Y 1 A CD LYS 137 A CD LYS 137 1 Y 1 A CE LYS 137 A CE LYS 137 1 Y 1 A NZ LYS 137 A NZ LYS 137 1 Y 1 A CG LEU 138 A CG LEU 138 1 Y 1 A CD1 LEU 138 A CD1 LEU 138 1 Y 1 A CD2 LEU 138 A CD2 LEU 138 1 Y 1 B CG1 VAL 11 B CG1 VAL 11 0 Y 1 B CG2 VAL 11 B CG2 VAL 11 0 Y 1 B OE1 GLU 74 B OE1 GLU 74 0 Y 1 B CB ARG 119 B CB ARG 119 0 Y 1 B CG ARG 119 B CG ARG 119 0 Y 1 B CD ARG 119 B CD ARG 119 0 Y 1 B NE ARG 119 B NE ARG 119 0 Y 1 B CZ ARG 119 B CZ ARG 119 0 Y 1 B NH1 ARG 119 B NH1 ARG 119 0 Y 1 B NH2 ARG 119 B NH2 ARG 119 0 Y 1 A ALA 141 A ALA 141 1 Y 1 A LEU 142 A LEU 142 1 Y 1 A GLU 143 A GLU 143 1 Y 1 A HIS 144 A HIS 144 1 Y 1 A HIS 145 A HIS 145 1 Y 1 A HIS 146 A HIS 146 1 Y 1 A HIS 147 A HIS 147 1 Y 1 A HIS 148 A HIS 148 1 Y 1 A HIS 149 A HIS 149 1 Y 1 A HIS 150 A HIS 150 1 Y 1 B GLU 126 B GLU 126 1 Y 1 B LEU 127 B LEU 127 1 Y 1 B LEU 128 B LEU 128 1 Y 1 B ARG 129 B ARG 129 1 Y 1 B ARG 130 B ARG 130 1 Y 1 B GLU 131 B GLU 131 1 Y 1 B LYS 132 B LYS 132 1 Y 1 B ASP 133 B ASP 133 1 Y 1 B LEU 134 B LEU 134 1 Y 1 B LYS 135 B LYS 135 1 Y 1 B GLU 136 B GLU 136 1 Y 1 B LYS 137 B LYS 137 1 Y 1 B LEU 138 B LEU 138 1 Y 1 B ALA 139 B ALA 139 1 Y 1 B ALA 140 B ALA 140 1 Y 1 B ALA 141 B ALA 141 1 Y 1 B LEU 142 B LEU 142 1 Y 1 B GLU 143 B GLU 143 1 Y 1 B HIS 144 B HIS 144 1 Y 1 B HIS 145 B HIS 145 1 Y 1 B HIS 146 B HIS 146 1 Y 1 B HIS 147 B HIS 147 1 Y 1 B HIS 148 B HIS 148 1 Y 1 B HIS 149 B HIS 149 1 Y 1 B HIS 150 B HIS 150 1 Y 1 A LYS 10 -24.55 -36.89 1 A TYR 19 -58.42 -73.46 1 A LEU 20 -38.97 -27.79 1 A GLU 42 -124.47 -58.43 1 A GLU 68 -45.20 -14.11 1 A GLU 72 -69.30 6.77 1 A HIS 81 -119.53 56.94 1 A ARG 129 -43.40 -19.33 1 A LYS 132 -66.79 -117.01 1 A ASP 133 -1.85 -56.09 1 A LEU 134 -84.09 -110.82 1 A LYS 135 -10.49 -116.20 1 A GLU 136 -64.01 62.98 1 A LYS 137 -161.73 -10.35 1 A ALA 139 44.12 8.81 1 B LEU 15 -34.49 -38.73 1 B SER 29 -60.03 -166.01 1 B ALA 30 174.69 95.29 1 B ARG 32 -126.96 -165.60 1 B PRO 71 -60.04 12.75 1 B ALA 95 -33.90 129.66 1 B LEU 121 -66.57 64.17 1 B ARG 122 -164.57 -36.15 0.2829 0.2506 0.2539 0.2539 3.03 17.0 1278 12698 12451 98.1 RANDOM 1 THROUGHOUT 0 MOLECULAR REPLACEMENT PDB ENTRY 1NY5 RESIDUES 1-124 OF CHAIN A Engh & Huber 3.03 17.0 1 2126 1 0 2124 1.6 .009162 0.5182 0.5097 3.19 164 1541 0.3833 0.3873 3.39 200 1755 0.3603 0.3422 3.65 170 1755 0.3096 0.2831 4.01 175 1773 0.2545 0.2043 4.58 193 1807 0.2107 0.1881 5.73 186 1807 0.2692 0.2264 17.00 190 1813 3.03 17.3 1ZY2 12701 12453 0.0 0.0 0.051 1 6.5 98 3.03 3.19 1748 0.443 97.9 data reduction MOSFLM data scaling SCALA refinement CNS data scaling CCP4 (SCALA) phasing CNS Crystal structure of the phosphorylated receiver domain of the transcription regulator NtrC1 from Aquifex aeolicus 1 N N 1 N N 2 N N 3 N N THE BIOLOGICAL UNIT IS THE DIMER IN THE ASYMMETRIC UNIT A ASP 9 A ASP 9 HELX_P A GLY 24 A GLY 24 1 1 16 A ARG 32 A ARG 32 HELX_P A LEU 40 A LEU 40 1 2 9 A ASN 58 A ASN 58 HELX_P A SER 70 A SER 70 1 3 13 A THR 83 A THR 83 HELX_P A MET 93 A MET 93 1 4 11 A MET 104 A MET 104 HELX_P A LYS 132 A LYS 132 1 5 29 A LEU 134 A LEU 134 HELX_P A LEU 138 A LEU 138 5 6 5 B ASP 9 B ASP 9 HELX_P B GLY 24 B GLY 24 1 7 16 B ARG 32 B ARG 32 HELX_P B LYS 43 B LYS 43 1 8 12 B GLY 59 B GLY 59 HELX_P B SER 70 B SER 70 1 9 12 B THR 83 B THR 83 HELX_P B GLY 94 B GLY 94 1 10 12 B MET 104 B MET 104 HELX_P B LEU 121 B LEU 121 1 11 18 covale 1.334 both A LEU 50 A C LEU 50 1_555 A PHD 51 A N PHD 51 1_555 covale 1.321 both A PHD 51 A C PHD 51 1_555 A LEU 52 A N LEU 52 1_555 covale 1.328 both B LEU 50 B C LEU 50 1_555 B PHD 51 B N PHD 51 1_555 covale 1.317 both B PHD 51 B C PHD 51 1_555 B LEU 52 B N LEU 52 1_555 metalc 2.999 A ASP 8 A OD2 ASP 8 1_555 A MG 151 C MG MG 1_555 metalc 2.870 A PHD 51 A OP2 PHD 51 1_555 A MG 151 C MG MG 1_555 TRANSCRIPTION PHOSPHORYLATED RECEIVER DOMAIN, SIGMA-54 ACTIVATOR, TWO-COMPONENT SIGNALING, NTRC, TRANSCRIPTION A LYS 101 A LYS 101 1 A PRO 102 A PRO 102 0.26 B LYS 101 B LYS 101 1 B PRO 102 B PRO 102 0.01 O67198_AQUAE UNP 1 1 O67198 MNVLVIEDDKVFRGLLEEYLSMKGIKVESAERGKEAYKLLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITG HGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHRKLRKENELLRREKDLKE 1 136 1ZY2 1 136 O67198 A 1 1 136 1 136 1ZY2 1 136 O67198 B 1 1 136 1 ASP modified residue PHD 51 1ZY2 A O67198 UNP 51 51 1 cloning artifact LYS 137 1ZY2 A O67198 UNP 137 1 cloning artifact LEU 138 1ZY2 A O67198 UNP 138 1 cloning artifact ALA 139 1ZY2 A O67198 UNP 139 1 cloning artifact ALA 140 1ZY2 A O67198 UNP 140 1 cloning artifact ALA 141 1ZY2 A O67198 UNP 141 1 cloning artifact LEU 142 1ZY2 A O67198 UNP 142 1 cloning artifact GLU 143 1ZY2 A O67198 UNP 143 1 expression tag HIS 144 1ZY2 A O67198 UNP 144 1 expression tag HIS 145 1ZY2 A O67198 UNP 145 1 expression tag HIS 146 1ZY2 A O67198 UNP 146 1 expression tag HIS 147 1ZY2 A O67198 UNP 147 1 expression tag HIS 148 1ZY2 A O67198 UNP 148 1 expression tag HIS 149 1ZY2 A O67198 UNP 149 1 expression tag HIS 150 1ZY2 A O67198 UNP 150 2 ASP modified residue PHD 51 1ZY2 B O67198 UNP 51 51 2 cloning artifact LYS 137 1ZY2 B O67198 UNP 137 2 cloning artifact LEU 138 1ZY2 B O67198 UNP 138 2 cloning artifact ALA 139 1ZY2 B O67198 UNP 139 2 cloning artifact ALA 140 1ZY2 B O67198 UNP 140 2 cloning artifact ALA 141 1ZY2 B O67198 UNP 141 2 cloning artifact LEU 142 1ZY2 B O67198 UNP 142 2 cloning artifact GLU 143 1ZY2 B O67198 UNP 143 2 expression tag HIS 144 1ZY2 B O67198 UNP 144 2 expression tag HIS 145 1ZY2 B O67198 UNP 145 2 expression tag HIS 146 1ZY2 B O67198 UNP 146 2 expression tag HIS 147 1ZY2 B O67198 UNP 147 2 expression tag HIS 148 1ZY2 B O67198 UNP 148 2 expression tag HIS 149 1ZY2 B O67198 UNP 149 2 expression tag HIS 150 1ZY2 B O67198 UNP 150 5 5 parallel parallel parallel parallel parallel parallel parallel parallel A LYS 26 A LYS 26 A GLU 28 A GLU 28 A ASN 2 A ASN 2 A ILE 6 A ILE 6 A VAL 47 A VAL 47 A PHD 51 A PHD 51 A GLU 74 A GLU 74 A THR 79 A THR 79 A ASP 97 A ASP 97 A THR 100 A THR 100 B LYS 26 B LYS 26 B GLU 28 B GLU 28 B ASN 2 B ASN 2 B VAL 5 B VAL 5 B VAL 47 B VAL 47 B LEU 49 B LEU 49 B GLU 74 B GLU 74 B THR 79 B THR 79 B ASP 97 B ASP 97 B THR 100 B THR 100 BINDING SITE FOR RESIDUE MG A 151 A MG 151 Software 3 A ASP 8 A ASP 8 3 1_555 A PHD 51 A PHD 51 3 1_555 A LEU 53 A LEU 53 3 1_555 152 P 31 2 1