data_1C0Q
#
_entry.id 1C0Q
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.381
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 1C0Q pdb_00001c0q 10.2210/pdb1c0q/pdb
RCSB RCSB001236 ? ?
WWPDB D_1000001236 ? ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.content_type
_pdbx_database_related.details
PDB 1AA5 unspecified 'CRYSTAL STRUCTURE OF VANCOMYCIN COMPLEXED WITH ACETATE'
PDB 1C0R unspecified 'CRYSTAL STRUCTURE OF VANCOMYCIN WITH D-LACTIC ACID'
PDB 1FVM unspecified 'CRYSTAL STRUCTURE OF VANCOMYCIN COMPLEXED WITH DI-ACETYL-LYS-D-ALA-D-ALA'
PDB 1GAC unspecified 'SOLUTION STRUCTURE OF A82846B COMPLEXED WITH ITS CELL WALL PENTAPEPTIDE FRAGMENT'
PDB 1GHG unspecified 'CRYSTAL STRUCTURE OF VANCOMYCIN AGLYCON'
PDB 1PN3 unspecified 'CRYSTAL STRUCTURE OF TDP-EPI-VANCOSAMINYLTRANSFERASE GTFA COMPLEXD WITH TDP AND DESVANCOSAMINYL VANCOMYCIN'
PDB 1PNV unspecified 'CRYSTAL STRUCTURE OF TDP-EPI-VANCOSAMINYLTRANSFERASE GTFA COMPLEXED WITH TDP AND VANCOMYCIN'
PDB 1QD8 unspecified 'CRYSTAL STRUCTURE OF VANCOMYCIN COMPLEXED WITH N-ACETYL GLYCIN'
PDB 1RRV unspecified 'CRYSTAL STRUCTURE OF TDP-VANCOSAMINYLTRANSFERASE GTFD COMPLEXED WITH TDP AND DESVANCOSAMINYL VANCOMYCIN.'
PDB 1SHO unspecified 'CRYSTAL STRUCTURE OF VANCOMYCIN COMPLEXED WITH ACETATE'
#
_pdbx_database_status.entry_id 1C0Q
_pdbx_database_status.status_code REL
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.recvd_initial_deposition_date 1999-07-20
_pdbx_database_status.SG_entry .
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Loll, P.J.' 1
'Kaplan, J.' 2
'Selinsky, B.' 3
'Axelsen, P.H.' 4
#
_citation.id primary
_citation.title
'Vancomycin binding to low-affinity ligands: delineating a minimum set of interactions necessary for high-affinity binding.'
_citation.journal_abbrev J.Med.Chem.
_citation.journal_volume 42
_citation.page_first 4714
_citation.page_last 4719
_citation.year 1999
_citation.journal_id_ASTM JMCMAR
_citation.country US
_citation.journal_id_ISSN 0022-2623
_citation.journal_id_CSD 0151
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 10579833
_citation.pdbx_database_id_DOI 10.1021/jm990361t
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Loll, P.J.' 1 ?
primary 'Kaplan, J.' 2 ?
primary 'Selinsky, B.S.' 3 ?
primary 'Axelsen, P.H.' 4 ?
#
_cell.entry_id 1C0Q
_cell.length_a 28.400
_cell.length_b 28.400
_cell.length_c 65.730
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 16
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 1C0Q
_symmetry.space_group_name_H-M 'P 43 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 96
_symmetry.space_group_name_Hall ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn VANCOMYCIN 1149.977 2 ? ? ? ?
2 branched man 'vancosamine-(1-2)-beta-D-glucopyranose' 323.340 2 ? ? ? ?
3 non-polymer syn 'CHLORIDE ION' 35.453 3 ? ? ? ?
4 non-polymer syn 'LACTIC ACID' 90.078 1 ? ? ? ?
5 water nat water 18.015 46 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code '(MLU)(OMZ)N(GHP)(GHP)(OMY)(3FG)'
_entity_poly.pdbx_seq_one_letter_code_can XXNGGYX
_entity_poly.pdbx_strand_id A,B
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MLU n
1 2 OMZ n
1 3 ASN n
1 4 GHP n
1 5 GHP n
1 6 OMY n
1 7 3FG n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific 'AMYCOLATOPSIS ORIENTALIS'
_pdbx_entity_src_syn.organism_common_name 'NOCARDIA ORIENTALIS'
_pdbx_entity_src_syn.ncbi_taxonomy_id 31958
_pdbx_entity_src_syn.details ?
#
_struct_ref.id 1
_struct_ref.db_name NOR
_struct_ref.db_code NOR00681
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
_struct_ref.pdbx_db_accession NOR00681
_struct_ref.pdbx_db_isoform ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 1C0Q A 1 ? 7 ? NOR00681 1 ? 7 ? 1 7
2 1 1C0Q B 1 ? 7 ? NOR00681 1 ? 7 ? 1 7
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
3FG 'L-peptide linking' . '(2S)-amino(3,5-dihydroxyphenyl)ethanoic acid' ? 'C8 H9 N O4' 183.161
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
BGC 'D-saccharide, beta linking' . beta-D-glucopyranose 'beta-D-glucose; D-glucose; glucose'
'C6 H12 O6' 180.156
CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453
GHP 'D-peptide linking' . '(2R)-amino(4-hydroxyphenyl)ethanoic acid' ? 'C8 H9 N O3' 167.162
HOH non-polymer . WATER ? 'H2 O' 18.015
LAC non-polymer . 'LACTIC ACID' ? 'C3 H6 O3' 90.078
MLU 'D-peptide linking' . N-methyl-D-leucine ? 'C7 H15 N O2' 145.199
OMY 'L-peptide linking' n '(betaR)-3-chloro-beta-hydroxy-L-tyrosine' ? 'C9 H10 Cl N O4' 231.633
OMZ 'D-peptide linking' . '(betaR)-3-CHLORO-BETA-HYDROXY-D-TYROSINE' ? 'C9 H10 Cl N O4' 231.633
RER 'L-saccharide, alpha linking' . vancosamine
'(1R,3S,4S,5S)-3-amino-2,3,6-trideoxy-3-methyl-alpha-L-arabino-hexopyranose' 'C7 H15 N O3' 161.199
#
_exptl.entry_id 1C0Q
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.88
_exptl_crystal.density_percent_sol 57.31
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.pH 4.6
_exptl_crystal_grow.temp 291
_exptl_crystal_grow.pdbx_details
;Sodium chloride, 2-acetoxy-D-propanoic acid, pH 4.6,
vapor diffusion/hanging drop, temperature 291K
;
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pdbx_pH_range .
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'IMAGE PLATE'
_diffrn_detector.type 'MAR scanner 300 mm plate'
_diffrn_detector.pdbx_collection_date 1997-05-05
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.978
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'NSLS BEAMLINE X12B'
_diffrn_source.pdbx_synchrotron_site NSLS
_diffrn_source.pdbx_synchrotron_beamline X12B
_diffrn_source.pdbx_wavelength 0.978
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.entry_id 1C0Q
_reflns.observed_criterion_sigma_I 2.000
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 20.000
_reflns.d_resolution_high 1.000
_reflns.number_obs 13845
_reflns.number_all 15091
_reflns.percent_possible_obs 92.0
_reflns.pdbx_Rmerge_I_obs 0.05400
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 34.7000
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy 11.800
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
#
_reflns_shell.pdbx_diffrn_id 1
_reflns_shell.pdbx_ordinal 1
_reflns_shell.d_res_high 1.00
_reflns_shell.d_res_low 1.04
_reflns_shell.percent_possible_all 65.0
_reflns_shell.Rmerge_I_obs 0.05500
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs ?
_reflns_shell.pdbx_redundancy 2.40
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
#
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.entry_id 1C0Q
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.ls_number_reflns_obs 13845
_refine.ls_number_reflns_all 15091
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 20.00
_refine.ls_d_res_high 1.00
_refine.ls_percent_reflns_obs 92.0
_refine.ls_R_factor_obs 0.119
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.119
_refine.ls_R_factor_R_free 0.139
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_number_reflns_R_free 1002
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details
;Refinement was carried out against F-squared using SHELXL-93.
Molecular geometry and atomic displacement parameters were restrained
throughout. Independent vancomycin monomers were restrained to have
similar 1-2 and 1-3 distances; restraints were also imposed to
limit deviations from planarity in rings and sp2 systems.
Along-bond components of anisotropic displacement parameters
were subjected to restraints. Solvent water atoms were restrained
to be approximately isotropic and were made subject to anti-bumping
restraints. Conjugate gradient refinement was used throughout,
except at the last stages, when blocked least squares was used.
;
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'ENGH & HUBER'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_B ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.ls_redundancy_reflns_obs ?
_refine.pdbx_overall_ESU_R ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 160
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 51
_refine_hist.number_atoms_solvent 46
_refine_hist.number_atoms_total 257
_refine_hist.d_res_high 1.00
_refine_hist.d_res_low 20.00
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
s_bond_d 0.019 ? ? ? 'X-RAY DIFFRACTION' ?
s_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
s_similar_dist ? ? ? ? 'X-RAY DIFFRACTION' ?
s_from_restr_planes ? ? ? ? 'X-RAY DIFFRACTION' ?
s_zero_chiral_vol ? ? ? ? 'X-RAY DIFFRACTION' ?
s_non_zero_chiral_vol ? ? ? ? 'X-RAY DIFFRACTION' ?
s_anti_bump_dis_restr ? ? ? ? 'X-RAY DIFFRACTION' ?
s_rigid_bond_adp_cmpnt ? ? ? ? 'X-RAY DIFFRACTION' ?
s_similar_adp_cmpnt ? ? ? ? 'X-RAY DIFFRACTION' ?
s_approx_iso_adps ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_pdbx_refine.entry_id 1C0Q
_pdbx_refine.R_factor_all_no_cutoff ?
_pdbx_refine.R_factor_obs_no_cutoff 0.119
_pdbx_refine.free_R_factor_no_cutoff 0.139
_pdbx_refine.free_R_error_no_cutoff ?
_pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ?
_pdbx_refine.free_R_val_test_set_ct_no_cutoff 1002
_pdbx_refine.R_factor_all_4sig_cutoff ?
_pdbx_refine.R_factor_obs_4sig_cutoff ?
_pdbx_refine.free_R_factor_4sig_cutoff ?
_pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ?
_pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ?
_pdbx_refine.number_reflns_obs_4sig_cutoff ?
#
_struct.entry_id 1C0Q
_struct.title 'COMPLEX OF VANCOMYCIN WITH 2-ACETOXY-D-PROPANOIC ACID'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 1C0Q
_struct_keywords.pdbx_keywords ANTIBIOTIC
_struct_keywords.text 'ANTIBIOTIC, GLYCOPEPTIDE ANTIBIOTIC'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 2 ?
D N N 2 ?
E N N 3 ?
F N N 3 ?
G N N 3 ?
H N N 4 ?
I N N 5 ?
J N N 5 ?
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A MLU 1 C ? ? ? 1_555 A OMZ 2 N ? ? A MLU 1 A OMZ 2 1_555 ? ? ? ? ? ? ? 1.348 ? ?
covale2 covale both ? A OMZ 2 C ? ? ? 1_555 A ASN 3 N ? ? A OMZ 2 A ASN 3 1_555 ? ? ? ? ? ? ? 1.347 ? ?
covale3 covale none ? A OMZ 2 OH ? ? ? 1_555 A GHP 4 C5 ? ? A OMZ 2 A GHP 4 1_555 ? ? ? ? ? ? ? 1.395 ? ?
covale4 covale both ? A ASN 3 C ? ? ? 1_555 A GHP 4 N ? ? A ASN 3 A GHP 4 1_555 ? ? ? ? ? ? ? 1.337 ? ?
covale5 covale both ? A GHP 4 C ? ? ? 1_555 A GHP 5 N ? ? A GHP 4 A GHP 5 1_555 ? ? ? ? ? ? ? 1.347 ? ?
covale6 covale none ? A GHP 4 C3 ? ? ? 1_555 A OMY 6 OCZ ? ? A GHP 4 A OMY 6 1_555 ? ? ? ? ? ? ? 1.393 ? ?
covale7 covale one ? A GHP 4 O4 ? ? ? 1_555 C BGC . C1 ? ? A GHP 4 C BGC 1 1_555 ? ? ? ? ? ? ? 1.432 ? ?
covale8 covale both ? A GHP 5 C ? ? ? 1_555 A OMY 6 N ? ? A GHP 5 A OMY 6 1_555 ? ? ? ? ? ? ? 1.329 ? ?
covale9 covale one ? A GHP 5 C3 ? ? ? 1_555 A 3FG 7 CG1 ? ? A GHP 5 A 3FG 7 1_555 ? ? ? ? ? ? ? 1.508 ? ?
covale10 covale both ? A OMY 6 C ? ? ? 1_555 A 3FG 7 N ? ? A OMY 6 A 3FG 7 1_555 ? ? ? ? ? ? ? 1.321 ? ?
covale11 covale both ? B MLU 1 C ? ? ? 1_555 B OMZ 2 N ? ? B MLU 1 B OMZ 2 1_555 ? ? ? ? ? ? ? 1.344 ? ?
covale12 covale both ? B OMZ 2 C ? ? ? 1_555 B ASN 3 N ? ? B OMZ 2 B ASN 3 1_555 ? ? ? ? ? ? ? 1.340 ? ?
covale13 covale none ? B OMZ 2 OH ? ? ? 1_555 B GHP 4 C5 ? ? B OMZ 2 B GHP 4 1_555 ? ? ? ? ? ? ? 1.398 ? ?
covale14 covale both ? B ASN 3 C ? ? ? 1_555 B GHP 4 N ? ? B ASN 3 B GHP 4 1_555 ? ? ? ? ? ? ? 1.337 ? ?
covale15 covale both ? B GHP 4 C ? ? ? 1_555 B GHP 5 N ? ? B GHP 4 B GHP 5 1_555 ? ? ? ? ? ? ? 1.340 ? ?
covale16 covale none ? B GHP 4 C3 ? ? ? 1_555 B OMY 6 OCZ ? ? B GHP 4 B OMY 6 1_555 ? ? ? ? ? ? ? 1.400 ? ?
covale17 covale one ? B GHP 4 O4 B ? ? 1_555 D BGC . C1 B ? B GHP 4 D BGC 1 1_555 ? ? ? ? ? ? ? 1.460 ? ?
covale18 covale one ? B GHP 4 O4 A ? ? 1_555 D BGC . C1 A ? B GHP 4 D BGC 1 1_555 ? ? ? ? ? ? ? 1.460 ? ?
covale19 covale both ? B GHP 5 C ? ? ? 1_555 B OMY 6 N ? ? B GHP 5 B OMY 6 1_555 ? ? ? ? ? ? ? 1.337 ? ?
covale20 covale one ? B GHP 5 C3 ? ? ? 1_555 B 3FG 7 CG1 ? ? B GHP 5 B 3FG 7 1_555 ? ? ? ? ? ? ? 1.497 ? ?
covale21 covale both ? B OMY 6 C ? ? ? 1_555 B 3FG 7 N ? ? B OMY 6 B 3FG 7 1_555 ? ? ? ? ? ? ? 1.326 ? ?
covale22 covale both ? C BGC . O2 ? ? ? 1_555 C RER . C1 ? ? C BGC 1 C RER 2 1_555 ? ? ? ? ? ? ? 1.579 ? ?
covale23 covale both ? D BGC . O2 B ? ? 1_555 D RER . C1 ? ? D BGC 1 D RER 2 1_555 ? ? ? ? ? ? ? 1.264 ? ?
covale24 covale both ? D BGC . O2 A ? ? 1_555 D RER . C1 ? ? D BGC 1 D RER 2 1_555 ? ? ? ? ? ? ? 1.608 ? ?
#
_struct_conn_type.id covale
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
loop_
_struct_mon_prot_cis.pdbx_id
_struct_mon_prot_cis.label_comp_id
_struct_mon_prot_cis.label_seq_id
_struct_mon_prot_cis.label_asym_id
_struct_mon_prot_cis.label_alt_id
_struct_mon_prot_cis.pdbx_PDB_ins_code
_struct_mon_prot_cis.auth_comp_id
_struct_mon_prot_cis.auth_seq_id
_struct_mon_prot_cis.auth_asym_id
_struct_mon_prot_cis.pdbx_label_comp_id_2
_struct_mon_prot_cis.pdbx_label_seq_id_2
_struct_mon_prot_cis.pdbx_label_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_ins_code_2
_struct_mon_prot_cis.pdbx_auth_comp_id_2
_struct_mon_prot_cis.pdbx_auth_seq_id_2
_struct_mon_prot_cis.pdbx_auth_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_model_num
_struct_mon_prot_cis.pdbx_omega_angle
1 GHP 5 A . ? GHP 5 A OMY 6 A ? OMY 6 A 1 7.26
2 GHP 5 B . ? GHP 5 B OMY 6 B ? OMY 6 B 1 20.37
#
_database_PDB_matrix.entry_id 1C0Q
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_atom_sites.entry_id 1C0Q
_atom_sites.fract_transf_matrix[1][1] 0.035211
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.035211
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.015214
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
CL
N
O
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N . MLU A 1 1 ? 10.048 8.778 -4.069 1.00 5.25 ? 1 MLU A N 1
HETATM 2 C CN . MLU A 1 1 ? 10.344 10.132 -4.677 1.00 7.69 ? 1 MLU A CN 1
HETATM 3 C CA . MLU A 1 1 ? 8.801 8.765 -3.270 1.00 4.60 ? 1 MLU A CA 1
HETATM 4 C C . MLU A 1 1 ? 7.640 9.195 -4.178 1.00 4.19 ? 1 MLU A C 1
HETATM 5 O O . MLU A 1 1 ? 7.452 8.625 -5.238 1.00 6.21 ? 1 MLU A O 1
HETATM 6 C CB . MLU A 1 1 ? 8.515 7.365 -2.731 1.00 4.87 ? 1 MLU A CB 1
HETATM 7 C CG . MLU A 1 1 ? 9.559 6.751 -1.814 1.00 5.07 ? 1 MLU A CG 1
HETATM 8 C CD1 . MLU A 1 1 ? 9.842 7.612 -0.607 1.00 10.03 ? 1 MLU A CD1 1
HETATM 9 C CD2 . MLU A 1 1 ? 9.076 5.390 -1.410 1.00 7.11 ? 1 MLU A CD2 1
HETATM 10 N N . OMZ A 1 2 ? 6.850 10.185 -3.716 1.00 3.73 ? 2 OMZ A N 1
HETATM 11 C CA . OMZ A 1 2 ? 5.774 10.700 -4.546 1.00 3.90 ? 2 OMZ A CA 1
HETATM 12 C C . OMZ A 1 2 ? 4.451 9.929 -4.429 1.00 3.78 ? 2 OMZ A C 1
HETATM 13 O O . OMZ A 1 2 ? 3.516 10.252 -5.146 1.00 4.23 ? 2 OMZ A O 1
HETATM 14 C CB . OMZ A 1 2 ? 5.503 12.212 -4.332 1.00 4.15 ? 2 OMZ A CB 1
HETATM 15 O OC . OMZ A 1 2 ? 6.691 12.948 -4.459 1.00 4.60 ? 2 OMZ A OC 1
HETATM 16 C CG . OMZ A 1 2 ? 4.842 12.486 -3.016 1.00 4.19 ? 2 OMZ A CG 1
HETATM 17 C CD1 . OMZ A 1 2 ? 3.464 12.714 -2.999 1.00 4.63 ? 2 OMZ A CD1 1
HETATM 18 C CD2 . OMZ A 1 2 ? 5.534 12.489 -1.818 1.00 4.44 ? 2 OMZ A CD2 1
HETATM 19 C CE1 . OMZ A 1 2 ? 2.805 12.900 -1.800 1.00 4.90 ? 2 OMZ A CE1 1
HETATM 20 CL CL . OMZ A 1 2 ? 1.121 13.229 -1.791 1.00 7.76 ? 2 OMZ A CL 1
HETATM 21 C CE2 . OMZ A 1 2 ? 4.871 12.631 -0.631 1.00 4.88 ? 2 OMZ A CE2 1
HETATM 22 C CZ . OMZ A 1 2 ? 3.513 12.810 -0.613 1.00 4.81 ? 2 OMZ A CZ 1
HETATM 23 O OH . OMZ A 1 2 ? 2.835 12.869 0.606 1.00 5.54 ? 2 OMZ A OH 1
ATOM 24 N N . ASN A 1 3 ? 4.410 8.915 -3.544 1.00 3.69 ? 3 ASN A N 1
ATOM 25 C CA . ASN A 1 3 ? 3.295 7.974 -3.520 1.00 3.55 ? 3 ASN A CA 1
ATOM 26 C C . ASN A 1 3 ? 2.279 8.263 -2.458 1.00 3.23 ? 3 ASN A C 1
ATOM 27 O O . ASN A 1 3 ? 1.140 8.658 -2.785 1.00 3.75 ? 3 ASN A O 1
ATOM 28 C CB . ASN A 1 3 ? 3.816 6.547 -3.577 1.00 3.76 ? 3 ASN A CB 1
ATOM 29 C CG . ASN A 1 3 ? 4.915 6.223 -2.579 1.00 3.71 ? 3 ASN A CG 1
ATOM 30 O OD1 . ASN A 1 3 ? 5.188 6.958 -1.654 1.00 3.94 ? 3 ASN A OD1 1
ATOM 31 N ND2 . ASN A 1 3 ? 5.528 5.047 -2.836 1.00 4.78 ? 3 ASN A ND2 1
HETATM 32 N N . GHP A 1 4 ? 2.648 8.088 -1.185 1.00 3.32 ? 4 GHP A N 1
HETATM 33 C CA . GHP A 1 4 ? 1.686 8.093 -0.100 1.00 3.40 ? 4 GHP A CA 1
HETATM 34 C C . GHP A 1 4 ? 1.847 6.851 0.752 1.00 3.26 ? 4 GHP A C 1
HETATM 35 O O . GHP A 1 4 ? 2.956 6.423 1.044 1.00 3.63 ? 4 GHP A O 1
HETATM 36 C C1 . GHP A 1 4 ? 1.707 9.357 0.764 1.00 3.64 ? 4 GHP A C1 1
HETATM 37 C C2 . GHP A 1 4 ? 1.137 9.379 2.028 1.00 4.07 ? 4 GHP A C2 1
HETATM 38 C C3 . GHP A 1 4 ? 1.167 10.528 2.787 1.00 4.26 ? 4 GHP A C3 1
HETATM 39 C C4 . GHP A 1 4 ? 1.700 11.699 2.272 1.00 4.37 ? 4 GHP A C4 1
HETATM 40 O O4 . GHP A 1 4 ? 1.818 12.843 3.053 1.00 4.98 ? 4 GHP A O4 1
HETATM 41 C C5 . GHP A 1 4 ? 2.250 11.673 1.024 1.00 4.64 ? 4 GHP A C5 1
HETATM 42 C C6 . GHP A 1 4 ? 2.259 10.514 0.270 1.00 3.95 ? 4 GHP A C6 1
HETATM 43 N N . GHP A 1 5 ? 0.700 6.272 1.156 1.00 3.40 ? 5 GHP A N 1
HETATM 44 C CA . GHP A 1 5 ? 0.680 5.347 2.244 1.00 3.25 ? 5 GHP A CA 1
HETATM 45 C C . GHP A 1 5 ? -0.734 5.462 2.902 1.00 3.79 ? 5 GHP A C 1
HETATM 46 O O . GHP A 1 5 ? -1.670 5.827 2.204 1.00 4.23 ? 5 GHP A O 1
HETATM 47 C C1 . GHP A 1 5 ? 0.875 3.864 1.976 1.00 3.55 ? 5 GHP A C1 1
HETATM 48 C C2 . GHP A 1 5 ? 1.890 3.182 2.624 1.00 3.64 ? 5 GHP A C2 1
HETATM 49 C C3 . GHP A 1 5 ? 1.938 1.787 2.653 1.00 4.14 ? 5 GHP A C3 1
HETATM 50 C C4 . GHP A 1 5 ? 0.972 1.081 1.954 1.00 4.43 ? 5 GHP A C4 1
HETATM 51 O O4 . GHP A 1 5 ? 0.994 -0.276 2.031 1.00 5.78 ? 5 GHP A O4 1
HETATM 52 C C5 . GHP A 1 5 ? 0.025 1.759 1.228 1.00 4.85 ? 5 GHP A C5 1
HETATM 53 C C6 . GHP A 1 5 ? -0.031 3.123 1.214 1.00 4.27 ? 5 GHP A C6 1
HETATM 54 N N . OMY A 1 6 ? -0.875 5.042 4.155 1.00 3.80 ? 6 OMY A N 1
HETATM 55 C CA . OMY A 1 6 ? 0.110 4.613 5.072 1.00 3.79 ? 6 OMY A CA 1
HETATM 56 O OCZ . OMY A 1 6 ? 0.677 10.586 4.090 1.00 4.82 ? 6 OMY A OCZ 1
HETATM 57 C CE2 . OMY A 1 6 ? -0.733 8.949 5.096 1.00 4.18 ? 6 OMY A CE2 1
HETATM 58 C CE1 . OMY A 1 6 ? 1.626 8.593 5.111 1.00 4.39 ? 6 OMY A CE1 1
HETATM 59 C CZ . OMY A 1 6 ? 0.522 9.378 4.758 1.00 4.21 ? 6 OMY A CZ 1
HETATM 60 C CG . OMY A 1 6 ? 0.173 6.891 5.985 1.00 3.85 ? 6 OMY A CG 1
HETATM 61 C CD2 . OMY A 1 6 ? -0.904 7.716 5.726 1.00 3.86 ? 6 OMY A CD2 1
HETATM 62 C CD1 . OMY A 1 6 ? 1.468 7.363 5.706 1.00 4.03 ? 6 OMY A CD1 1
HETATM 63 C CB . OMY A 1 6 ? 0.027 5.438 6.394 1.00 4.16 ? 6 OMY A CB 1
HETATM 64 CL CL . OMY A 1 6 ? 3.245 9.140 4.750 1.00 5.57 ? 6 OMY A CL 1
HETATM 65 O O . OMY A 1 6 ? -1.040 2.517 5.168 1.00 5.17 ? 6 OMY A O 1
HETATM 66 C C . OMY A 1 6 ? 0.035 3.099 5.268 1.00 4.19 ? 6 OMY A C 1
HETATM 67 O ODE . OMY A 1 6 ? -1.221 5.230 7.010 1.00 4.76 ? 6 OMY A ODE 1
HETATM 68 N N . 3FG A 1 7 ? 1.175 2.492 5.544 1.00 4.21 ? 7 3FG A N 1
HETATM 69 O OD1 . 3FG A 1 7 ? 4.644 1.279 1.777 1.00 4.33 ? 7 3FG A OD1 1
HETATM 70 C CD1 . 3FG A 1 7 ? 4.263 0.895 3.034 1.00 4.18 ? 7 3FG A CD1 1
HETATM 71 C CG1 . 3FG A 1 7 ? 2.993 1.109 3.491 1.00 4.00 ? 7 3FG A CG1 1
HETATM 72 C CZ . 3FG A 1 7 ? 5.233 0.289 3.814 1.00 4.06 ? 7 3FG A CZ 1
HETATM 73 C CD2 . 3FG A 1 7 ? 4.920 -0.100 5.087 1.00 4.28 ? 7 3FG A CD2 1
HETATM 74 O OD2 . 3FG A 1 7 ? 5.821 -0.688 5.933 1.00 5.22 ? 7 3FG A OD2 1
HETATM 75 C CG2 . 3FG A 1 7 ? 3.658 0.107 5.607 1.00 4.71 ? 7 3FG A CG2 1
HETATM 76 C CB . 3FG A 1 7 ? 2.690 0.741 4.830 1.00 4.29 ? 7 3FG A CB 1
HETATM 77 C CA . 3FG A 1 7 ? 1.304 1.051 5.408 1.00 4.91 ? 7 3FG A CA 1
HETATM 78 C C . 3FG A 1 7 ? 1.001 0.256 6.684 1.00 5.83 ? 7 3FG A C 1
HETATM 79 O O . 3FG A 1 7 ? 1.075 0.888 7.788 1.00 7.33 ? 7 3FG A O 1
HETATM 80 O OXT . 3FG A 1 7 ? 0.764 -0.950 6.545 1.00 7.85 ? 7 3FG A OXT 1
HETATM 81 N N . MLU B 1 1 ? -13.045 5.886 5.804 1.00 5.98 ? 1 MLU B N 1
HETATM 82 C CN . MLU B 1 1 ? -13.354 6.388 7.161 1.00 7.17 ? 1 MLU B CN 1
HETATM 83 C CA . MLU B 1 1 ? -11.685 6.224 5.270 1.00 6.25 ? 1 MLU B CA 1
HETATM 84 C C . MLU B 1 1 ? -10.682 5.688 6.270 1.00 5.60 ? 1 MLU B C 1
HETATM 85 O O . MLU B 1 1 ? -10.865 4.582 6.772 1.00 7.38 ? 1 MLU B O 1
HETATM 86 C CB . MLU B 1 1 ? -11.467 5.603 3.935 1.00 8.57 ? 1 MLU B CB 1
HETATM 87 C CG . MLU B 1 1 ? -12.425 5.964 2.828 1.00 8.68 ? 1 MLU B CG 1
HETATM 88 C CD1 . MLU B 1 1 ? -12.495 7.424 2.563 1.00 12.56 ? 1 MLU B CD1 1
HETATM 89 C CD2 . MLU B 1 1 ? -12.118 5.105 1.638 1.00 10.60 ? 1 MLU B CD2 1
HETATM 90 N N . OMZ B 1 2 ? -9.643 6.496 6.544 1.00 5.63 ? 2 OMZ B N 1
HETATM 91 C CA . OMZ B 1 2 ? -8.715 6.086 7.595 1.00 5.87 ? 2 OMZ B CA 1
HETATM 92 C C . OMZ B 1 2 ? -7.357 5.572 7.096 1.00 5.14 ? 2 OMZ B C 1
HETATM 93 O O . OMZ B 1 2 ? -6.556 5.130 7.912 1.00 5.91 ? 2 OMZ B O 1
HETATM 94 C CB . OMZ B 1 2 ? -8.531 7.180 8.682 1.00 6.31 ? 2 OMZ B CB 1
HETATM 95 O OC . OMZ B 1 2 ? -9.882 7.544 8.997 1.00 7.98 ? 2 OMZ B OC 1
HETATM 96 C CG . OMZ B 1 2 ? -7.716 8.330 8.187 1.00 5.48 ? 2 OMZ B CG 1
HETATM 97 C CD1 . OMZ B 1 2 ? -6.323 8.306 8.378 1.00 4.75 ? 2 OMZ B CD1 1
HETATM 98 C CD2 . OMZ B 1 2 ? -8.242 9.344 7.443 1.00 6.27 ? 2 OMZ B CD2 1
HETATM 99 C CE1 . OMZ B 1 2 ? -5.533 9.233 7.774 1.00 4.53 ? 2 OMZ B CE1 1
HETATM 100 CL CL . OMZ B 1 2 ? -3.807 9.181 7.974 1.00 5.42 ? 2 OMZ B CL 1
HETATM 101 C CE2 . OMZ B 1 2 ? -7.446 10.288 6.822 1.00 6.13 ? 2 OMZ B CE2 1
HETATM 102 C CZ . OMZ B 1 2 ? -6.096 10.214 6.951 1.00 4.88 ? 2 OMZ B CZ 1
HETATM 103 O OH . OMZ B 1 2 ? -5.297 11.112 6.265 1.00 5.41 ? 2 OMZ B OH 1
ATOM 104 N N . ASN B 1 3 ? -7.152 5.626 5.773 1.00 5.32 ? 3 ASN B N 1
ATOM 105 C CA . ASN B 1 3 ? -6.027 4.893 5.159 1.00 5.09 ? 3 ASN B CA 1
ATOM 106 C C . ASN B 1 3 ? -4.949 5.764 4.582 1.00 4.48 ? 3 ASN B C 1
ATOM 107 O O . ASN B 1 3 ? -3.791 5.606 4.924 1.00 5.82 ? 3 ASN B O 1
ATOM 108 C CB . ASN B 1 3 ? -6.611 3.936 4.112 1.00 8.27 ? 3 ASN B CB 1
ATOM 109 C CG . ASN B 1 3 ? -7.764 3.109 4.597 1.00 10.28 ? 3 ASN B CG 1
ATOM 110 O OD1 . ASN B 1 3 ? -8.758 2.980 3.827 1.00 16.67 ? 3 ASN B OD1 1
ATOM 111 N ND2 . ASN B 1 3 ? -7.649 2.655 5.821 1.00 13.83 ? 3 ASN B ND2 1
HETATM 112 N N . GHP B 1 4 ? -5.320 6.687 3.689 1.00 4.25 ? 4 GHP B N 1
HETATM 113 C CA . GHP B 1 4 ? -4.354 7.514 2.974 1.00 4.15 ? 4 GHP B CA 1
HETATM 114 C C . GHP B 1 4 ? -4.670 7.473 1.478 1.00 4.28 ? 4 GHP B C 1
HETATM 115 O O . GHP B 1 4 ? -5.806 7.705 1.065 1.00 5.62 ? 4 GHP B O 1
HETATM 116 C C1 . GHP B 1 4 ? -4.332 8.960 3.420 1.00 4.26 ? 4 GHP B C1 1
HETATM 117 C C2 . GHP B 1 4 ? -3.721 9.914 2.654 1.00 5.47 ? 4 GHP B C2 1
HETATM 118 C C3 . GHP B 1 4 ? -3.703 11.235 3.038 1.00 6.37 ? 4 GHP B C3 1
HETATM 119 C C4 . GHP B 1 4 ? -4.241 11.633 4.246 1.00 6.38 ? 4 GHP B C4 1
HETATM 120 O O4 A GHP B 1 4 ? -4.434 12.935 4.572 0.42 4.94 ? 4 GHP B O4 1
HETATM 121 O O4 B GHP B 1 4 ? -3.827 12.962 4.733 0.58 5.35 ? 4 GHP B O4 1
HETATM 122 C C5 . GHP B 1 4 ? -4.800 10.664 5.037 1.00 4.96 ? 4 GHP B C5 1
HETATM 123 C C6 . GHP B 1 4 ? -4.857 9.343 4.645 1.00 4.68 ? 4 GHP B C6 1
HETATM 124 N N . GHP B 1 5 ? -3.599 7.264 0.700 1.00 3.96 ? 5 GHP B N 1
HETATM 125 C CA . GHP B 1 5 ? -3.580 7.548 -0.724 1.00 4.33 ? 5 GHP B CA 1
HETATM 126 C C . GHP B 1 5 ? -2.172 8.133 -0.997 1.00 3.99 ? 5 GHP B C 1
HETATM 127 O O . GHP B 1 5 ? -1.291 7.954 -0.148 1.00 4.21 ? 5 GHP B O 1
HETATM 128 C C1 . GHP B 1 5 ? -3.690 6.343 -1.632 1.00 4.41 ? 5 GHP B C1 1
HETATM 129 C C2 . GHP B 1 5 ? -4.601 6.355 -2.681 1.00 4.90 ? 5 GHP B C2 1
HETATM 130 C C3 . GHP B 1 5 ? -4.566 5.390 -3.699 1.00 5.43 ? 5 GHP B C3 1
HETATM 131 C C4 . GHP B 1 5 ? -3.645 4.368 -3.578 1.00 5.53 ? 5 GHP B C4 1
HETATM 132 O O4 . GHP B 1 5 ? -3.658 3.418 -4.592 1.00 6.79 ? 5 GHP B O4 1
HETATM 133 C C5 . GHP B 1 5 ? -2.801 4.287 -2.501 1.00 5.16 ? 5 GHP B C5 1
HETATM 134 C C6 . GHP B 1 5 ? -2.789 5.279 -1.562 1.00 4.65 ? 5 GHP B C6 1
HETATM 135 N N . OMY B 1 6 ? -1.911 8.711 -2.174 1.00 3.85 ? 6 OMY B N 1
HETATM 136 C CA . OMY B 1 6 ? -2.848 9.239 -3.121 1.00 4.29 ? 6 OMY B CA 1
HETATM 137 O OCZ . OMY B 1 6 ? -3.155 12.225 2.213 1.00 8.43 ? 6 OMY B OCZ 1
HETATM 138 C CE2 . OMY B 1 6 ? -1.847 11.821 0.294 1.00 5.87 ? 6 OMY B CE2 1
HETATM 139 C CE1 . OMY B 1 6 ? -4.222 11.763 0.099 1.00 6.74 ? 6 OMY B CE1 1
HETATM 140 C CZ . OMY B 1 6 ? -3.069 11.938 0.867 1.00 6.20 ? 6 OMY B CZ 1
HETATM 141 C CG . OMY B 1 6 ? -2.875 11.302 -1.825 1.00 4.99 ? 6 OMY B CG 1
HETATM 142 C CD2 . OMY B 1 6 ? -1.753 11.514 -1.050 1.00 4.92 ? 6 OMY B CD2 1
HETATM 143 C CD1 . OMY B 1 6 ? -4.135 11.441 -1.237 1.00 5.71 ? 6 OMY B CD1 1
HETATM 144 C CB . OMY B 1 6 ? -2.777 10.764 -3.238 1.00 4.82 ? 6 OMY B CB 1
HETATM 145 CL CL . OMY B 1 6 ? -5.809 11.897 0.799 1.00 9.49 ? 6 OMY B CL 1
HETATM 146 O O . OMY B 1 6 ? -1.601 8.083 -4.803 1.00 4.14 ? 6 OMY B O 1
HETATM 147 C C . OMY B 1 6 ? -2.728 8.443 -4.425 1.00 4.70 ? 6 OMY B C 1
HETATM 148 O ODE . OMY B 1 6 ? -1.567 11.117 -3.864 1.00 4.94 ? 6 OMY B ODE 1
HETATM 149 N N . 3FG B 1 7 ? -3.856 8.138 -5.051 1.00 5.34 ? 7 3FG B N 1
HETATM 150 O OD1 . 3FG B 1 7 ? -6.931 4.017 -3.745 1.00 8.87 ? 7 3FG B OD1 1
HETATM 151 C CD1 . 3FG B 1 7 ? -6.727 4.836 -4.821 1.00 7.53 ? 7 3FG B CD1 1
HETATM 152 C CG1 . 3FG B 1 7 ? -5.518 5.515 -4.847 1.00 6.73 ? 7 3FG B CG1 1
HETATM 153 C CZ . 3FG B 1 7 ? -7.642 4.953 -5.792 1.00 9.28 ? 7 3FG B CZ 1
HETATM 154 C CD2 . 3FG B 1 7 ? -7.406 5.794 -6.882 1.00 8.85 ? 7 3FG B CD2 1
HETATM 155 O OD2 . 3FG B 1 7 ? -8.315 5.926 -7.882 1.00 12.03 ? 7 3FG B OD2 1
HETATM 156 C CG2 . 3FG B 1 7 ? -6.216 6.457 -6.924 1.00 8.33 ? 7 3FG B CG2 1
HETATM 157 C CB . 3FG B 1 7 ? -5.274 6.361 -5.937 1.00 6.74 ? 7 3FG B CB 1
HETATM 158 C CA . 3FG B 1 7 ? -3.934 7.126 -6.064 1.00 7.01 ? 7 3FG B CA 1
HETATM 159 C C . 3FG B 1 7 ? -3.665 7.651 -7.492 1.00 10.54 ? 7 3FG B C 1
HETATM 160 O O . 3FG B 1 7 ? -3.969 8.874 -7.672 1.00 16.26 ? 7 3FG B O 1
HETATM 161 O OXT . 3FG B 1 7 ? -3.301 6.866 -8.314 1.00 13.45 ? 7 3FG B OXT 1
HETATM 162 C C2 . BGC C 2 . ? 0.873 14.541 4.419 1.00 7.64 ? 1 BGC C C2 1
HETATM 163 C C3 . BGC C 2 . ? -0.348 15.372 4.676 1.00 9.71 ? 1 BGC C C3 1
HETATM 164 C C4 . BGC C 2 . ? -0.857 15.973 3.358 1.00 10.01 ? 1 BGC C C4 1
HETATM 165 C C5 . BGC C 2 . ? -1.038 14.826 2.306 1.00 9.67 ? 1 BGC C C5 1
HETATM 166 C C6 . BGC C 2 . ? -1.382 15.323 0.903 1.00 11.66 ? 1 BGC C C6 1
HETATM 167 C C1 . BGC C 2 . ? 0.589 13.519 3.342 1.00 6.40 ? 1 BGC C C1 1
HETATM 168 O O2 . BGC C 2 . ? 1.264 13.926 5.606 1.00 8.28 ? 1 BGC C O2 1
HETATM 169 O O3 . BGC C 2 . ? -0.076 16.378 5.656 1.00 11.90 ? 1 BGC C O3 1
HETATM 170 O O4 . BGC C 2 . ? -2.084 16.600 3.676 1.00 12.72 ? 1 BGC C O4 1
HETATM 171 O O5 . BGC C 2 . ? 0.177 14.139 2.158 1.00 6.93 ? 1 BGC C O5 1
HETATM 172 O O6 . BGC C 2 . ? -0.618 16.337 0.586 1.00 13.33 ? 1 BGC C O6 1
HETATM 173 C C1 . RER C 2 . ? 2.594 14.501 6.233 1.00 9.99 ? 2 RER C C1 1
HETATM 174 C C2 . RER C 2 . ? 2.501 13.967 7.633 1.00 10.42 ? 2 RER C C2 1
HETATM 175 C C3 . RER C 2 . ? 3.042 12.546 7.655 1.00 8.93 ? 2 RER C C3 1
HETATM 176 N N3 . RER C 2 . ? 3.461 12.299 9.115 1.00 11.42 ? 2 RER C N3 1
HETATM 177 C C3A . RER C 2 . ? 2.074 11.505 7.356 1.00 8.44 ? 2 RER C C3A 1
HETATM 178 C C4 . RER C 2 . ? 4.271 12.456 6.823 1.00 11.02 ? 2 RER C C4 1
HETATM 179 O O4 . RER C 2 . ? 5.133 13.449 7.548 1.00 13.78 ? 2 RER C O4 1
HETATM 180 C C5 . RER C 2 . ? 3.976 12.831 5.381 1.00 10.17 ? 2 RER C C5 1
HETATM 181 O O5 . RER C 2 . ? 3.608 14.232 5.409 1.00 11.52 ? 2 RER C O5 1
HETATM 182 C C5A . RER C 2 . ? 5.146 12.716 4.425 1.00 12.64 ? 2 RER C C5A 1
HETATM 183 C C2 A BGC D 2 . ? -5.397 14.877 5.451 0.42 5.94 ? 1 BGC D C2 1
HETATM 184 C C2 B BGC D 2 . ? -4.616 15.078 5.487 0.58 5.44 ? 1 BGC D C2 1
HETATM 185 C C3 A BGC D 2 . ? -6.611 15.802 5.332 0.42 7.19 ? 1 BGC D C3 1
HETATM 186 C C3 B BGC D 2 . ? -5.701 16.170 5.254 0.58 6.23 ? 1 BGC D C3 1
HETATM 187 C C4 A BGC D 2 . ? -7.252 15.838 3.940 0.42 7.82 ? 1 BGC D C4 1
HETATM 188 C C4 B BGC D 2 . ? -5.780 16.492 3.756 0.58 8.18 ? 1 BGC D C4 1
HETATM 189 C C5 A BGC D 2 . ? -7.534 14.376 3.448 0.42 7.60 ? 1 BGC D C5 1
HETATM 190 C C5 B BGC D 2 . ? -6.045 15.161 2.996 0.58 8.17 ? 1 BGC D C5 1
HETATM 191 C C6 A BGC D 2 . ? -8.085 14.350 2.017 0.42 8.34 ? 1 BGC D C6 1
HETATM 192 C C6 B BGC D 2 . ? -6.128 15.371 1.480 0.58 9.37 ? 1 BGC D C6 1
HETATM 193 C C1 A BGC D 2 . ? -5.756 13.535 4.731 0.42 5.81 ? 1 BGC D C1 1
HETATM 194 C C1 B BGC D 2 . ? -4.956 13.877 4.594 0.58 5.75 ? 1 BGC D C1 1
HETATM 195 O O2 A BGC D 2 . ? -5.174 14.576 6.834 0.42 6.91 ? 1 BGC D O2 1
HETATM 196 O O2 B BGC D 2 . ? -4.798 14.686 6.855 0.58 6.54 ? 1 BGC D O2 1
HETATM 197 O O3 A BGC D 2 . ? -6.194 17.147 5.683 0.42 7.08 ? 1 BGC D O3 1
HETATM 198 O O3 B BGC D 2 . ? -5.286 17.389 5.923 0.58 7.05 ? 1 BGC D O3 1
HETATM 199 O O4 A BGC D 2 . ? -8.449 16.599 4.026 0.42 8.50 ? 1 BGC D O4 1
HETATM 200 O O4 B BGC D 2 . ? -6.823 17.437 3.552 0.58 9.53 ? 1 BGC D O4 1
HETATM 201 O O5 A BGC D 2 . ? -6.231 13.781 3.402 0.42 5.79 ? 1 BGC D O5 1
HETATM 202 O O5 B BGC D 2 . ? -4.982 14.278 3.254 0.58 7.37 ? 1 BGC D O5 1
HETATM 203 O O6 A BGC D 2 . ? -8.663 13.209 1.758 0.42 10.40 ? 1 BGC D O6 1
HETATM 204 O O6 B BGC D 2 . ? -4.995 15.848 1.100 0.58 13.21 ? 1 BGC D O6 1
HETATM 205 C C1 . RER D 2 . ? -3.841 15.064 7.589 1.00 6.72 ? 2 RER D C1 1
HETATM 206 C C2 . RER D 2 . ? -4.194 14.991 9.064 1.00 5.49 ? 2 RER D C2 1
HETATM 207 C C3 . RER D 2 . ? -4.186 13.552 9.557 1.00 4.36 ? 2 RER D C3 1
HETATM 208 N N3 . RER D 2 . ? -4.171 13.582 11.066 1.00 4.25 ? 2 RER D N3 1
HETATM 209 C C3A . RER D 2 . ? -5.429 12.825 9.179 1.00 4.71 ? 2 RER D C3A 1
HETATM 210 C C4 . RER D 2 . ? -2.926 12.864 9.102 1.00 4.82 ? 2 RER D C4 1
HETATM 211 O O4 . RER D 2 . ? -1.804 13.496 9.783 1.00 6.41 ? 2 RER D O4 1
HETATM 212 C C5 . RER D 2 . ? -2.802 12.946 7.578 1.00 6.02 ? 2 RER D C5 1
HETATM 213 O O5 . RER D 2 . ? -2.698 14.343 7.234 1.00 7.20 ? 2 RER D O5 1
HETATM 214 C C5A . RER D 2 . ? -1.502 12.289 7.077 1.00 6.98 ? 2 RER D C5A 1
HETATM 215 CL CL . CL E 3 . ? 3.729 4.356 5.611 1.00 5.43 ? 21 CL A CL 1
HETATM 216 CL CL . CL F 3 . ? 0.266 11.337 10.479 1.00 9.54 ? 20 CL B CL 1
HETATM 217 CL CL . CL G 3 . ? -6.353 9.518 -3.615 1.00 12.69 ? 10 CL B CL 1
HETATM 218 C C . LAC H 4 . ? -8.710 8.182 3.728 1.00 14.89 ? 23 LAC B C 1
HETATM 219 C CA . LAC H 4 . ? -8.318 9.269 2.742 1.00 17.02 ? 23 LAC B CA 1
HETATM 220 C CB . LAC H 4 . ? -9.053 8.971 1.449 1.00 22.89 ? 23 LAC B CB 1
HETATM 221 O O . LAC H 4 . ? -9.586 8.542 4.624 1.00 12.70 ? 23 LAC B O 1
HETATM 222 O OHN . LAC H 4 . ? -8.664 10.551 3.263 1.00 23.66 ? 23 LAC B OHN 1
HETATM 223 O OXT . LAC H 4 . ? -8.222 7.003 3.462 1.00 10.57 ? 23 LAC B OXT 1
HETATM 224 O O . HOH I 5 . ? 12.570 8.498 -2.824 1.00 15.67 ? 2001 HOH A O 1
HETATM 225 O O . HOH I 5 . ? 7.050 10.322 6.147 1.00 7.53 ? 2002 HOH A O 1
HETATM 226 O O . HOH I 5 . ? 14.153 9.053 -5.324 1.00 33.71 ? 2003 HOH A O 1
HETATM 227 O O . HOH I 5 . ? 14.081 7.334 -1.166 1.00 38.96 ? 2004 HOH A O 1
HETATM 228 O O . HOH I 5 . ? 10.395 13.734 -3.437 1.00 23.60 ? 2005 HOH A O 1
HETATM 229 O O . HOH I 5 . ? 9.574 14.587 -5.626 1.00 30.79 ? 2006 HOH A O 1
HETATM 230 O O B HOH I 5 . ? 3.645 15.246 1.968 0.67 14.85 ? 2007 HOH A O 1
HETATM 231 O O . HOH I 5 . ? 8.174 12.097 -6.576 1.00 9.39 ? 2008 HOH A O 1
HETATM 232 O O . HOH I 5 . ? 9.002 11.892 -1.703 1.00 8.33 ? 2009 HOH A O 1
HETATM 233 O O . HOH I 5 . ? 0.948 -2.826 10.519 1.00 70.26 ? 2010 HOH A O 1
HETATM 234 O O . HOH I 5 . ? 1.334 15.618 10.428 1.00 25.20 ? 2011 HOH A O 1
HETATM 235 O O . HOH I 5 . ? 3.637 3.637 0.000 0.50 5.47 ? 2012 HOH A O 1
HETATM 236 O O . HOH I 5 . ? -0.915 -1.803 1.044 1.00 19.00 ? 2013 HOH A O 1
HETATM 237 O O . HOH I 5 . ? -3.813 3.973 1.838 1.00 10.66 ? 2014 HOH A O 1
HETATM 238 O O . HOH I 5 . ? -3.298 2.138 3.628 1.00 20.48 ? 2015 HOH A O 1
HETATM 239 O O . HOH I 5 . ? -0.619 2.994 8.543 1.00 11.67 ? 2016 HOH A O 1
HETATM 240 O O . HOH I 5 . ? -2.983 3.557 6.242 1.00 44.64 ? 2017 HOH A O 1
HETATM 241 O O . HOH I 5 . ? 3.343 2.613 8.318 1.00 11.16 ? 2018 HOH A O 1
HETATM 242 O O . HOH I 5 . ? 5.368 0.262 8.774 1.00 23.70 ? 2019 HOH A O 1
HETATM 243 O O . HOH I 5 . ? 1.244 -2.125 4.174 1.00 7.68 ? 2020 HOH A O 1
HETATM 244 O O . HOH I 5 . ? -0.419 15.822 8.359 1.00 14.41 ? 2021 HOH A O 1
HETATM 245 O O A HOH I 5 . ? 2.267 15.855 0.738 0.33 14.10 ? 2022 HOH A O 1
HETATM 246 O O . HOH I 5 . ? 3.068 14.046 13.625 1.00 38.84 ? 2023 HOH A O 1
HETATM 247 O O . HOH I 5 . ? -1.632 18.333 7.976 1.00 29.10 ? 2024 HOH A O 1
HETATM 248 O O . HOH I 5 . ? -0.656 19.289 1.171 1.00 44.07 ? 2025 HOH A O 1
HETATM 249 O O . HOH I 5 . ? 1.820 18.336 5.702 1.00 32.96 ? 2026 HOH A O 1
HETATM 250 O O . HOH I 5 . ? 7.666 13.078 7.284 1.00 27.51 ? 2027 HOH A O 1
HETATM 251 O O . HOH I 5 . ? 4.234 16.934 4.002 1.00 35.66 ? 2028 HOH A O 1
HETATM 252 O O . HOH I 5 . ? 4.461 14.387 10.783 1.00 24.60 ? 2029 HOH A O 1
HETATM 253 O O . HOH I 5 . ? 3.825 -0.965 10.815 1.00 38.94 ? 2030 HOH A O 1
HETATM 254 O O . HOH I 5 . ? 10.147 17.147 -5.732 1.00 29.21 ? 2031 HOH A O 1
HETATM 255 O O . HOH J 5 . ? -3.830 5.216 8.022 1.00 9.84 ? 2001 HOH B O 1
HETATM 256 O O . HOH J 5 . ? -9.776 6.828 -0.899 1.00 30.83 ? 2002 HOH B O 1
HETATM 257 O O . HOH J 5 . ? -11.331 3.756 -10.152 1.00 29.57 ? 2003 HOH B O 1
HETATM 258 O O . HOH J 5 . ? -12.448 10.591 -0.793 1.00 44.10 ? 2005 HOH B O 1
HETATM 259 O O . HOH J 5 . ? -7.387 8.458 -1.020 1.00 21.79 ? 2006 HOH B O 1
HETATM 260 O O . HOH J 5 . ? -3.600 3.602 -7.378 1.00 23.69 ? 2007 HOH B O 1
HETATM 261 O O . HOH J 5 . ? -1.829 13.810 -3.978 1.00 15.06 ? 2008 HOH B O 1
HETATM 262 O O . HOH J 5 . ? -9.316 2.814 -3.525 1.00 18.90 ? 2009 HOH B O 1
HETATM 263 O O . HOH J 5 . ? -6.164 4.044 0.542 1.00 26.12 ? 2010 HOH B O 1
HETATM 264 O O . HOH J 5 . ? -2.783 18.373 5.682 1.00 24.81 ? 2011 HOH B O 1
HETATM 265 O O . HOH J 5 . ? -4.399 15.000 -1.605 1.00 30.59 ? 2012 HOH B O 1
HETATM 266 O O . HOH J 5 . ? -7.657 18.747 1.398 1.00 45.98 ? 2013 HOH B O 1
HETATM 267 O O . HOH J 5 . ? -9.099 10.939 -0.831 1.00 34.18 ? 2014 HOH B O 1
HETATM 268 O O . HOH J 5 . ? -10.594 4.192 -7.502 1.00 26.02 ? 2015 HOH B O 1
HETATM 269 O O . HOH J 5 . ? -8.437 5.235 1.091 1.00 21.70 ? 2017 HOH B O 1
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 MLU 1 1 1 MLU MLU A . n
A 1 2 OMZ 2 2 2 OMZ OMZ A . n
A 1 3 ASN 3 3 3 ASN ASN A . n
A 1 4 GHP 4 4 4 GHP GHP A . n
A 1 5 GHP 5 5 5 GHP GHP A . n
A 1 6 OMY 6 6 6 OMY OMY A . n
A 1 7 3FG 7 7 7 3FG 3FG A . n
B 1 1 MLU 1 1 1 MLU MLU B . n
B 1 2 OMZ 2 2 2 OMZ OMZ B . n
B 1 3 ASN 3 3 3 ASN ASN B . n
B 1 4 GHP 4 4 4 GHP GHP B . n
B 1 5 GHP 5 5 5 GHP GHP B . n
B 1 6 OMY 6 6 6 OMY OMY B . n
B 1 7 3FG 7 7 7 3FG 3FG B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 CL 1 21 21 CL CL A .
F 3 CL 1 20 20 CL CL B .
G 3 CL 1 10 20 CL CL B .
H 4 LAC 1 23 23 LAC LAC B .
I 5 HOH 1 2001 2001 HOH HOH A .
I 5 HOH 2 2002 2002 HOH HOH A .
I 5 HOH 3 2003 2003 HOH HOH A .
I 5 HOH 4 2004 2004 HOH HOH A .
I 5 HOH 5 2005 2005 HOH HOH A .
I 5 HOH 6 2006 2006 HOH HOH A .
I 5 HOH 7 2007 2007 HOH HOH A .
I 5 HOH 8 2008 2008 HOH HOH A .
I 5 HOH 9 2009 2009 HOH HOH A .
I 5 HOH 10 2010 2004 HOH HOH A .
I 5 HOH 11 2011 2011 HOH HOH A .
I 5 HOH 12 2012 2012 HOH HOH A .
I 5 HOH 13 2013 2013 HOH HOH A .
I 5 HOH 14 2014 2014 HOH HOH A .
I 5 HOH 15 2015 2015 HOH HOH A .
I 5 HOH 16 2016 2016 HOH HOH A .
I 5 HOH 17 2017 2017 HOH HOH A .
I 5 HOH 18 2018 2018 HOH HOH A .
I 5 HOH 19 2019 2019 HOH HOH A .
I 5 HOH 20 2020 2020 HOH HOH A .
I 5 HOH 21 2021 2021 HOH HOH A .
I 5 HOH 22 2022 2022 HOH HOH A .
I 5 HOH 23 2023 2023 HOH HOH A .
I 5 HOH 24 2024 2024 HOH HOH A .
I 5 HOH 25 2025 2025 HOH HOH A .
I 5 HOH 26 2026 2026 HOH HOH A .
I 5 HOH 27 2027 2027 HOH HOH A .
I 5 HOH 28 2028 2028 HOH HOH A .
I 5 HOH 29 2029 2029 HOH HOH A .
I 5 HOH 30 2030 2015 HOH HOH A .
I 5 HOH 31 2031 2016 HOH HOH A .
J 5 HOH 1 2001 2001 HOH HOH B .
J 5 HOH 2 2002 2002 HOH HOH B .
J 5 HOH 3 2003 2003 HOH HOH B .
J 5 HOH 4 2005 2005 HOH HOH B .
J 5 HOH 5 2006 2006 HOH HOH B .
J 5 HOH 6 2007 2007 HOH HOH B .
J 5 HOH 7 2008 2008 HOH HOH B .
J 5 HOH 8 2009 2009 HOH HOH B .
J 5 HOH 9 2010 2010 HOH HOH B .
J 5 HOH 10 2011 2011 HOH HOH B .
J 5 HOH 11 2012 2012 HOH HOH B .
J 5 HOH 12 2013 2013 HOH HOH B .
J 5 HOH 13 2014 2014 HOH HOH B .
J 5 HOH 14 2015 2010 HOH HOH B .
J 5 HOH 15 2017 2017 HOH HOH B .
#
_pdbx_molecule_features.prd_id PRD_000204
_pdbx_molecule_features.name VANCOMYCIN
_pdbx_molecule_features.type Glycopeptide
_pdbx_molecule_features.class Antibiotic
_pdbx_molecule_features.details
;VANCOMYCIN IS A TRICYCLIC GLYCOPEPTIDE,
GLYCOSYLATED BY A DISACCHARIDE (RESIDUES 8
AND 9) ON RESIDUE 4.
;
#
loop_
_pdbx_molecule.instance_id
_pdbx_molecule.prd_id
_pdbx_molecule.asym_id
1 PRD_000204 A
1 PRD_000204 C
2 PRD_000204 B
2 PRD_000204 D
#
loop_
_pdbx_struct_assembly.id
_pdbx_struct_assembly.details
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
1 author_defined_assembly ? dimeric 2
2 software_defined_assembly PISA dimeric 2
#
loop_
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
_pdbx_struct_assembly_gen.asym_id_list
1 1 A,B,C,D,E,F,G,H,I,J
2 1 A,C,E,I
2 2 B,D,F,G,H,J
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
2 'ABSA (A^2)' 1060 ?
2 MORE -19 ?
2 'SSA (A^2)' 2540 ?
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 6_555 x+1/2,-y+1/2,-z+1/4 1.0000000000 0.0000000000 0.0000000000 14.2000000000 0.0000000000
-1.0000000000 0.0000000000 14.2000000000 0.0000000000 0.0000000000 -1.0000000000 16.4325000000
#
_pdbx_struct_special_symmetry.id 1
_pdbx_struct_special_symmetry.PDB_model_num 1
_pdbx_struct_special_symmetry.auth_asym_id A
_pdbx_struct_special_symmetry.auth_comp_id HOH
_pdbx_struct_special_symmetry.auth_seq_id 2012
_pdbx_struct_special_symmetry.PDB_ins_code ?
_pdbx_struct_special_symmetry.label_asym_id I
_pdbx_struct_special_symmetry.label_comp_id HOH
_pdbx_struct_special_symmetry.label_seq_id .
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 1999-07-30
2 'Structure model' 1 1 2008-04-26
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2011-07-27
5 'Structure model' 1 4 2012-12-12
6 'Structure model' 1 5 2013-03-27
7 'Structure model' 1 6 2013-04-10
8 'Structure model' 2 0 2020-07-29
9 'Structure model' 3 0 2023-11-15
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 8 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Atomic model'
4 4 'Structure model' 'Database references'
5 4 'Structure model' 'Derived calculations'
6 4 'Structure model' 'Non-polymer description'
7 4 'Structure model' 'Structure summary'
8 5 'Structure model' Other
9 6 'Structure model' 'Structure summary'
10 7 'Structure model' 'Derived calculations'
11 8 'Structure model' Advisory
12 8 'Structure model' 'Atomic model'
13 8 'Structure model' 'Data collection'
14 8 'Structure model' 'Derived calculations'
15 8 'Structure model' 'Polymer sequence'
16 8 'Structure model' 'Refinement description'
17 8 'Structure model' 'Structure summary'
18 9 'Structure model' 'Atomic model'
19 9 'Structure model' 'Data collection'
20 9 'Structure model' 'Database references'
21 9 'Structure model' 'Derived calculations'
22 9 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 8 'Structure model' atom_site
2 8 'Structure model' chem_comp
3 8 'Structure model' entity
4 8 'Structure model' entity_poly
5 8 'Structure model' pdbx_branch_scheme
6 8 'Structure model' pdbx_chem_comp_identifier
7 8 'Structure model' pdbx_entity_branch
8 8 'Structure model' pdbx_entity_branch_descriptor
9 8 'Structure model' pdbx_entity_branch_link
10 8 'Structure model' pdbx_entity_branch_list
11 8 'Structure model' pdbx_entity_nonpoly
12 8 'Structure model' pdbx_molecule
13 8 'Structure model' pdbx_nonpoly_scheme
14 8 'Structure model' pdbx_struct_assembly_gen
15 8 'Structure model' pdbx_struct_special_symmetry
16 8 'Structure model' pdbx_validate_close_contact
17 8 'Structure model' software
18 8 'Structure model' struct_asym
19 8 'Structure model' struct_conn
20 8 'Structure model' struct_site
21 8 'Structure model' struct_site_gen
22 9 'Structure model' atom_site
23 9 'Structure model' chem_comp
24 9 'Structure model' chem_comp_atom
25 9 'Structure model' chem_comp_bond
26 9 'Structure model' database_2
27 9 'Structure model' struct_conn
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 8 'Structure model' '_atom_site.B_iso_or_equiv'
2 8 'Structure model' '_atom_site.Cartn_x'
3 8 'Structure model' '_atom_site.Cartn_y'
4 8 'Structure model' '_atom_site.Cartn_z'
5 8 'Structure model' '_atom_site.auth_asym_id'
6 8 'Structure model' '_atom_site.auth_atom_id'
7 8 'Structure model' '_atom_site.auth_comp_id'
8 8 'Structure model' '_atom_site.auth_seq_id'
9 8 'Structure model' '_atom_site.label_alt_id'
10 8 'Structure model' '_atom_site.label_asym_id'
11 8 'Structure model' '_atom_site.label_atom_id'
12 8 'Structure model' '_atom_site.label_comp_id'
13 8 'Structure model' '_atom_site.label_entity_id'
14 8 'Structure model' '_atom_site.occupancy'
15 8 'Structure model' '_atom_site.type_symbol'
16 8 'Structure model' '_chem_comp.name'
17 8 'Structure model' '_chem_comp.type'
18 8 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can'
19 8 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list'
20 8 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id'
21 8 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1'
22 8 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2'
23 8 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1'
24 8 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2'
25 8 'Structure model' '_struct_conn.pdbx_dist_value'
26 8 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
27 8 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id'
28 8 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id'
29 8 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
30 8 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
31 8 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
32 8 'Structure model' '_struct_conn.ptnr1_label_asym_id'
33 8 'Structure model' '_struct_conn.ptnr1_label_atom_id'
34 8 'Structure model' '_struct_conn.ptnr1_label_comp_id'
35 8 'Structure model' '_struct_conn.ptnr1_label_seq_id'
36 8 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
37 8 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
38 8 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
39 8 'Structure model' '_struct_conn.ptnr2_label_asym_id'
40 8 'Structure model' '_struct_conn.ptnr2_label_atom_id'
41 8 'Structure model' '_struct_conn.ptnr2_label_comp_id'
42 8 'Structure model' '_struct_conn.ptnr2_label_seq_id'
43 9 'Structure model' '_atom_site.auth_atom_id'
44 9 'Structure model' '_atom_site.label_atom_id'
45 9 'Structure model' '_chem_comp.pdbx_synonyms'
46 9 'Structure model' '_database_2.pdbx_DOI'
47 9 'Structure model' '_database_2.pdbx_database_accession'
48 9 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
SHELXL refinement . ? 1
DENZO 'data reduction' . ? 2
SCALEPACK 'data scaling' . ? 3
#
_pdbx_entry_details.entry_id 1C0Q
_pdbx_entry_details.compound_details
;VANCOMYCIN IS A TRICYCLIC GLYCOPEPTIDE. THE SCAFFOLD IS
A HEPTAPEPTIDE WITH THE CONFIGURATION D-D-L-D-D-L-L. IT IS
FURTHER GLYCOSYLATED BY A DISACCHARIDE MADE OF D-GLUCOSE
AND VANCOSAMINE.
HERE, VANCOMYCIN IS REPRESENTED BY GROUPING TOUGHER THE
SEQUENCE (SEQRES) AND THE TWO LIGANDS (HET) BGC AND RER.
;
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.has_ligand_of_interest ?
#
_pdbx_validate_close_contact.id 1
_pdbx_validate_close_contact.PDB_model_num 1
_pdbx_validate_close_contact.auth_atom_id_1 O2
_pdbx_validate_close_contact.auth_asym_id_1 D
_pdbx_validate_close_contact.auth_comp_id_1 BGC
_pdbx_validate_close_contact.auth_seq_id_1 1
_pdbx_validate_close_contact.PDB_ins_code_1 ?
_pdbx_validate_close_contact.label_alt_id_1 B
_pdbx_validate_close_contact.auth_atom_id_2 O5
_pdbx_validate_close_contact.auth_asym_id_2 D
_pdbx_validate_close_contact.auth_comp_id_2 RER
_pdbx_validate_close_contact.auth_seq_id_2 2
_pdbx_validate_close_contact.PDB_ins_code_2 ?
_pdbx_validate_close_contact.label_alt_id_2 ?
_pdbx_validate_close_contact.dist 2.16
#
_pdbx_validate_torsion.id 1
_pdbx_validate_torsion.PDB_model_num 1
_pdbx_validate_torsion.auth_comp_id ASN
_pdbx_validate_torsion.auth_asym_id A
_pdbx_validate_torsion.auth_seq_id 3
_pdbx_validate_torsion.PDB_ins_code ?
_pdbx_validate_torsion.label_alt_id ?
_pdbx_validate_torsion.phi -99.63
_pdbx_validate_torsion.psi -68.39
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
3FG N N N N 1
3FG OD1 O N N 2
3FG CD1 C Y N 3
3FG CG1 C Y N 4
3FG CZ C Y N 5
3FG CD2 C Y N 6
3FG OD2 O N N 7
3FG CG2 C Y N 8
3FG CB C Y N 9
3FG CA C N S 10
3FG C C N N 11
3FG O O N N 12
3FG OXT O N N 13
3FG H H N N 14
3FG H2 H N N 15
3FG HA H N N 16
3FG HD1 H N N 17
3FG HG1 H N N 18
3FG HZ H N N 19
3FG HD2 H N N 20
3FG HG2 H N N 21
3FG HXT H N N 22
ASN N N N N 23
ASN CA C N S 24
ASN C C N N 25
ASN O O N N 26
ASN CB C N N 27
ASN CG C N N 28
ASN OD1 O N N 29
ASN ND2 N N N 30
ASN OXT O N N 31
ASN H H N N 32
ASN H2 H N N 33
ASN HA H N N 34
ASN HB2 H N N 35
ASN HB3 H N N 36
ASN HD21 H N N 37
ASN HD22 H N N 38
ASN HXT H N N 39
BGC C2 C N R 40
BGC C3 C N S 41
BGC C4 C N S 42
BGC C5 C N R 43
BGC C6 C N N 44
BGC C1 C N R 45
BGC O1 O N N 46
BGC O2 O N N 47
BGC O3 O N N 48
BGC O4 O N N 49
BGC O5 O N N 50
BGC O6 O N N 51
BGC H2 H N N 52
BGC H3 H N N 53
BGC H4 H N N 54
BGC H5 H N N 55
BGC H61 H N N 56
BGC H62 H N N 57
BGC H1 H N N 58
BGC HO1 H N N 59
BGC HO2 H N N 60
BGC HO3 H N N 61
BGC HO4 H N N 62
BGC HO6 H N N 63
CL CL CL N N 64
GHP N N N N 65
GHP CA C N R 66
GHP C C N N 67
GHP O O N N 68
GHP OXT O N N 69
GHP C1 C Y N 70
GHP C2 C Y N 71
GHP C3 C Y N 72
GHP C4 C Y N 73
GHP O4 O N N 74
GHP C5 C Y N 75
GHP C6 C Y N 76
GHP H H N N 77
GHP H2 H N N 78
GHP HA H N N 79
GHP HXT H N N 80
GHP HC2 H N N 81
GHP H3 H N N 82
GHP HO4 H N N 83
GHP H5 H N N 84
GHP H6 H N N 85
HOH O O N N 86
HOH H1 H N N 87
HOH H2 H N N 88
LAC C C N N 89
LAC CA C N R 90
LAC CB C N N 91
LAC O O N N 92
LAC OHN O N N 93
LAC OXT O N N 94
LAC HA H N N 95
LAC HB1 H N N 96
LAC HB2 H N N 97
LAC HB3 H N N 98
LAC H H N N 99
LAC HXT H N N 100
MLU N N N N 101
MLU CN C N N 102
MLU CA C N R 103
MLU C C N N 104
MLU O O N N 105
MLU CB C N N 106
MLU CG C N N 107
MLU CD1 C N N 108
MLU CD2 C N N 109
MLU OXT O N N 110
MLU H H N N 111
MLU HCN1 H N N 112
MLU HCN2 H N N 113
MLU HCN3 H N N 114
MLU HA H N N 115
MLU HB2 H N N 116
MLU HB3 H N N 117
MLU HXT H N N 118
MLU HG H N N 119
MLU HD11 H N N 120
MLU HD12 H N N 121
MLU HD13 H N N 122
MLU HD21 H N N 123
MLU HD22 H N N 124
MLU HD23 H N N 125
OMY N N N N 126
OMY CA C N S 127
OMY OCZ O N N 128
OMY CE2 C Y N 129
OMY CE1 C Y N 130
OMY CZ C Y N 131
OMY CG C Y N 132
OMY CD2 C Y N 133
OMY CD1 C Y N 134
OMY CB C N R 135
OMY CL CL N N 136
OMY O O N N 137
OMY C C N N 138
OMY ODE O N N 139
OMY OXT O N N 140
OMY H H N N 141
OMY H2 H N N 142
OMY HA H N N 143
OMY HCZ H N N 144
OMY HE2 H N N 145
OMY HD2 H N N 146
OMY HD1 H N N 147
OMY HB H N N 148
OMY HXT H N N 149
OMY HDE H N N 150
OMZ N N N N 151
OMZ CA C N R 152
OMZ C C N N 153
OMZ O O N N 154
OMZ OXT O N N 155
OMZ CB C N R 156
OMZ OC O N N 157
OMZ CG C Y N 158
OMZ CD1 C Y N 159
OMZ CD2 C Y N 160
OMZ CE1 C Y N 161
OMZ CL CL N N 162
OMZ CE2 C Y N 163
OMZ CZ C Y N 164
OMZ OH O N N 165
OMZ H H N N 166
OMZ H2 H N N 167
OMZ HA H N N 168
OMZ HB H N N 169
OMZ HXT H N N 170
OMZ HC H N N 171
OMZ HD1 H N N 172
OMZ HD2 H N N 173
OMZ HE2 H N N 174
OMZ HH H N N 175
RER C1 C N R 176
RER C2 C N N 177
RER C3 C N S 178
RER N3 N N N 179
RER C3A C N N 180
RER C4 C N S 181
RER O4 O N N 182
RER C5 C N S 183
RER O5 O N N 184
RER C5A C N N 185
RER O1 O N N 186
RER H1 H N N 187
RER H21C H N N 188
RER H22C H N N 189
RER HO1 H N N 190
RER H31N H N N 191
RER H32N H N N 192
RER H3A1 H N N 193
RER H3A2 H N N 194
RER H3A3 H N N 195
RER H4 H N N 196
RER HO4 H N N 197
RER H5 H N N 198
RER H5A1 H N N 199
RER H5A2 H N N 200
RER H5A3 H N N 201
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
3FG N CA sing N N 1
3FG OD1 CD1 sing N N 2
3FG CD1 CG1 sing Y N 3
3FG CD1 CZ doub Y N 4
3FG CG1 CB doub Y N 5
3FG CZ CD2 sing Y N 6
3FG CD2 OD2 sing N N 7
3FG CD2 CG2 doub Y N 8
3FG CG2 CB sing Y N 9
3FG CB CA sing N N 10
3FG CA C sing N N 11
3FG C O doub N N 12
3FG C OXT sing N N 13
3FG N H sing N N 14
3FG N H2 sing N N 15
3FG CA HA sing N N 16
3FG OD1 HD1 sing N N 17
3FG CG1 HG1 sing N N 18
3FG CZ HZ sing N N 19
3FG OD2 HD2 sing N N 20
3FG CG2 HG2 sing N N 21
3FG OXT HXT sing N N 22
ASN N CA sing N N 23
ASN N H sing N N 24
ASN N H2 sing N N 25
ASN CA C sing N N 26
ASN CA CB sing N N 27
ASN CA HA sing N N 28
ASN C O doub N N 29
ASN C OXT sing N N 30
ASN CB CG sing N N 31
ASN CB HB2 sing N N 32
ASN CB HB3 sing N N 33
ASN CG OD1 doub N N 34
ASN CG ND2 sing N N 35
ASN ND2 HD21 sing N N 36
ASN ND2 HD22 sing N N 37
ASN OXT HXT sing N N 38
BGC C2 C3 sing N N 39
BGC C2 C1 sing N N 40
BGC C2 O2 sing N N 41
BGC C2 H2 sing N N 42
BGC C3 C4 sing N N 43
BGC C3 O3 sing N N 44
BGC C3 H3 sing N N 45
BGC C4 C5 sing N N 46
BGC C4 O4 sing N N 47
BGC C4 H4 sing N N 48
BGC C5 C6 sing N N 49
BGC C5 O5 sing N N 50
BGC C5 H5 sing N N 51
BGC C6 O6 sing N N 52
BGC C6 H61 sing N N 53
BGC C6 H62 sing N N 54
BGC C1 O1 sing N N 55
BGC C1 O5 sing N N 56
BGC C1 H1 sing N N 57
BGC O1 HO1 sing N N 58
BGC O2 HO2 sing N N 59
BGC O3 HO3 sing N N 60
BGC O4 HO4 sing N N 61
BGC O6 HO6 sing N N 62
GHP N CA sing N N 63
GHP N H sing N N 64
GHP N H2 sing N N 65
GHP CA C sing N N 66
GHP CA C1 sing N N 67
GHP CA HA sing N N 68
GHP C O doub N N 69
GHP C OXT sing N N 70
GHP OXT HXT sing N N 71
GHP C1 C2 doub Y N 72
GHP C1 C6 sing Y N 73
GHP C2 C3 sing Y N 74
GHP C2 HC2 sing N N 75
GHP C3 C4 doub Y N 76
GHP C3 H3 sing N N 77
GHP C4 O4 sing N N 78
GHP C4 C5 sing Y N 79
GHP O4 HO4 sing N N 80
GHP C5 C6 doub Y N 81
GHP C5 H5 sing N N 82
GHP C6 H6 sing N N 83
HOH O H1 sing N N 84
HOH O H2 sing N N 85
LAC C CA sing N N 86
LAC C O doub N N 87
LAC C OXT sing N N 88
LAC CA CB sing N N 89
LAC CA OHN sing N N 90
LAC CA HA sing N N 91
LAC CB HB1 sing N N 92
LAC CB HB2 sing N N 93
LAC CB HB3 sing N N 94
LAC OHN H sing N N 95
LAC OXT HXT sing N N 96
MLU N CN sing N N 97
MLU N CA sing N N 98
MLU CA C sing N N 99
MLU CA CB sing N N 100
MLU C O doub N N 101
MLU C OXT sing N N 102
MLU CB CG sing N N 103
MLU CG CD1 sing N N 104
MLU CG CD2 sing N N 105
MLU N H sing N N 106
MLU CN HCN1 sing N N 107
MLU CN HCN2 sing N N 108
MLU CN HCN3 sing N N 109
MLU CA HA sing N N 110
MLU CB HB2 sing N N 111
MLU CB HB3 sing N N 112
MLU OXT HXT sing N N 113
MLU CG HG sing N N 114
MLU CD1 HD11 sing N N 115
MLU CD1 HD12 sing N N 116
MLU CD1 HD13 sing N N 117
MLU CD2 HD21 sing N N 118
MLU CD2 HD22 sing N N 119
MLU CD2 HD23 sing N N 120
OMY N CA sing N N 121
OMY OCZ CZ sing N N 122
OMY CZ CE2 sing Y N 123
OMY CZ CE1 doub Y N 124
OMY CE2 CD2 doub Y N 125
OMY CD2 CG sing Y N 126
OMY CG CD1 doub Y N 127
OMY CG CB sing N N 128
OMY CD1 CE1 sing Y N 129
OMY CE1 CL sing N N 130
OMY C O doub N N 131
OMY C CA sing N N 132
OMY C OXT sing N N 133
OMY CA CB sing N N 134
OMY CB ODE sing N N 135
OMY N H sing N N 136
OMY N H2 sing N N 137
OMY CA HA sing N N 138
OMY OCZ HCZ sing N N 139
OMY CE2 HE2 sing N N 140
OMY CD2 HD2 sing N N 141
OMY CD1 HD1 sing N N 142
OMY CB HB sing N N 143
OMY OXT HXT sing N N 144
OMY ODE HDE sing N N 145
OMZ N CA sing N N 146
OMZ CA C sing N N 147
OMZ CA CB sing N N 148
OMZ C O doub N N 149
OMZ C OXT sing N N 150
OMZ CL CE1 sing N N 151
OMZ CB OC sing N N 152
OMZ CB CG sing N N 153
OMZ CG CD1 doub Y N 154
OMZ CG CD2 sing Y N 155
OMZ CD1 CE1 sing Y N 156
OMZ CD2 CE2 doub Y N 157
OMZ CE1 CZ doub Y N 158
OMZ CE2 CZ sing Y N 159
OMZ CZ OH sing N N 160
OMZ N H sing N N 161
OMZ N H2 sing N N 162
OMZ CA HA sing N N 163
OMZ CB HB sing N N 164
OMZ OXT HXT sing N N 165
OMZ OC HC sing N N 166
OMZ CD1 HD1 sing N N 167
OMZ CD2 HD2 sing N N 168
OMZ CE2 HE2 sing N N 169
OMZ OH HH sing N N 170
RER C1 C2 sing N N 171
RER C1 O5 sing N N 172
RER C1 O1 sing N N 173
RER C2 C3 sing N N 174
RER C3 N3 sing N N 175
RER C3 C3A sing N N 176
RER C3 C4 sing N N 177
RER C4 O4 sing N N 178
RER C4 C5 sing N N 179
RER C5 O5 sing N N 180
RER C5 C5A sing N N 181
RER C1 H1 sing N N 182
RER C2 H21C sing N N 183
RER C2 H22C sing N N 184
RER O1 HO1 sing N N 185
RER N3 H31N sing N N 186
RER N3 H32N sing N N 187
RER C3A H3A1 sing N N 188
RER C3A H3A2 sing N N 189
RER C3A H3A3 sing N N 190
RER C4 H4 sing N N 191
RER O4 HO4 sing N N 192
RER C5 H5 sing N N 193
RER C5A H5A1 sing N N 194
RER C5A H5A2 sing N N 195
RER C5A H5A3 sing N N 196
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
C 2 BGC 1 C BGC 1 A BGC 8 n
C 2 RER 2 C RER 2 A RER 9 n
D 2 BGC 1 D BGC 1 B BGC 8 n
D 2 RER 2 D RER 2 B RER 9 n
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb
BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose
BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp
BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc
#
_pdbx_entity_branch.entity_id 2
_pdbx_entity_branch.type oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 2 'WURCS=2.0/2,2,1/[a2122h-1b_1-5][ad621m-1a_1-5_3*C_3*N]/1-2/a2-b1' WURCS PDB2Glycan 1.1.0
2 2 '[][D-1-deoxy-Glcp]{[(2+1)][a-L-2-deoxy-Fucp3N]{}}' LINUCS PDB-CARE ?
#
_pdbx_entity_branch_link.link_id 1
_pdbx_entity_branch_link.entity_id 2
_pdbx_entity_branch_link.entity_branch_list_num_1 2
_pdbx_entity_branch_link.comp_id_1 RER
_pdbx_entity_branch_link.atom_id_1 C1
_pdbx_entity_branch_link.leaving_atom_id_1 O1
_pdbx_entity_branch_link.entity_branch_list_num_2 1
_pdbx_entity_branch_link.comp_id_2 BGC
_pdbx_entity_branch_link.atom_id_2 O2
_pdbx_entity_branch_link.leaving_atom_id_2 HO2
_pdbx_entity_branch_link.value_order sing
_pdbx_entity_branch_link.details ?
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
2 BGC 1 n
2 RER 2 n
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
3 'CHLORIDE ION' CL
4 'LACTIC ACID' LAC
5 water HOH
#