HEADER DNA 06-JAN-04 1S1K TITLE INFLUENCE OF GROOVE INTERACTIONS ON DNA HOLLIDAY JUNCTION FORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*CP*CP*(1AP)P*GP*TP*AP*CP*TP*GP*G)-3'; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES KEYWDS B-DNA, DOUBLE HELIX, 2, 6-DIAMINOPURINE, MINOR GROOVE INTERACTIONS, KEYWDS 2 DNA EXPDTA X-RAY DIFFRACTION AUTHOR F.A.HAYS,J.WATSON,P.S.HO REVDAT 3 23-AUG-23 1S1K 1 REMARK LINK ATOM REVDAT 2 24-FEB-09 1S1K 1 VERSN REVDAT 1 31-AUG-04 1S1K 0 JRNL AUTH F.A.HAYS,Z.J.JONES,P.S.HO JRNL TITL INFLUENCE OF MINOR GROOVE SUBSTITUENTS ON THE STRUCTURE OF JRNL TITL 2 DNA HOLLIDAY JUNCTIONS. JRNL REF BIOCHEMISTRY V. 43 9813 2004 JRNL REFN ISSN 0006-2960 JRNL PMID 15274635 JRNL DOI 10.1021/BI049461D REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : CNS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 17.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 29235.770 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.9 REMARK 3 NUMBER OF REFLECTIONS : 2413 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.400 REMARK 3 FREE R VALUE TEST SET COUNT : 228 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.017 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 287 REMARK 3 BIN R VALUE (WORKING SET) : 0.3080 REMARK 3 BIN FREE R VALUE : 0.4000 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 34 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.069 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 203 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 40 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 8.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.22000 REMARK 3 B22 (A**2) : 3.22000 REMARK 3 B33 (A**2) : -6.45000 REMARK 3 B12 (A**2) : 3.51000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.25 REMARK 3 ESD FROM SIGMAA (A) : 0.26 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.33 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.067 REMARK 3 BOND ANGLES (DEGREES) : 6.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 5.460 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1S1K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JAN-04. REMARK 100 THE DEPOSITION ID IS D_1000021250. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JAN-02 REMARK 200 TEMPERATURE (KELVIN) : 103.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : BENT GE(111) MONOCHROMATOR REMARK 200 OPTICS : BENT CONICAL SI-MIRROR (RH REMARK 200 COATING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 2528 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 17.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 72.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.24500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.980 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: 1P4Z REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5MM TRIS(HCL), 23MM CAACETATE, 16% REMARK 280 MPD, .6MM DNA AGAINST 28% MPD AT RT, PH 7.50, VAPOR DIFFUSION, REMARK 280 SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.51867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 59.03733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 44.27800 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 73.79667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 14.75933 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 29.51867 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 59.03733 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 73.79667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 44.27800 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 14.75933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 1 CHAIN(S). THE FULL BIOLOGICAL UNIT REMARK 300 CONSISTS OF TWO STRANDS FORMING A B-DNA DUPLEX STRUCTURE. REMARK 300 SEE REMARK 350 FOR INFORMATION ON GENERATING THE BIOLOGICAL REMARK 300 MOLECULE(S). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 16.47850 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -28.54160 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 14.75933 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CA CA A 11 LIES ON A SPECIAL POSITION. REMARK 375 CA CA A 14 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 32 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O4' DC A 2 O HOH A 48 2.03 REMARK 500 OP2 DA A 6 O HOH A 37 2.04 REMARK 500 O2 DT A 5 O HOH A 49 2.10 REMARK 500 OP1 DG A 9 O HOH A 16 2.11 REMARK 500 O HOH A 35 O HOH A 41 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 37 O HOH A 37 8555 1.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC A 1 C3' DC A 1 C2' -0.053 REMARK 500 DC A 1 C2' DC A 1 C1' 0.087 REMARK 500 DC A 1 C4 DC A 1 C5 0.053 REMARK 500 DC A 1 C5 DC A 1 C6 0.125 REMARK 500 DC A 2 P DC A 2 OP2 0.115 REMARK 500 DC A 2 C3' DC A 2 C2' -0.048 REMARK 500 DC A 2 C4 DC A 2 N4 0.106 REMARK 500 DC A 2 N1 DC A 2 C2 0.083 REMARK 500 DC A 2 C5 DC A 2 C6 -0.051 REMARK 500 DG A 4 P DG A 4 O5' 0.070 REMARK 500 DG A 4 O3' DG A 4 C3' -0.121 REMARK 500 DG A 4 C2 DG A 4 N3 0.059 REMARK 500 DG A 4 C4 DG A 4 C5 -0.083 REMARK 500 DG A 4 C8 DG A 4 N9 -0.095 REMARK 500 DG A 4 O3' DT A 5 P -0.081 REMARK 500 DT A 5 C2' DT A 5 C1' 0.115 REMARK 500 DT A 5 O3' DT A 5 C3' -0.164 REMARK 500 DT A 5 C1' DT A 5 N1 0.106 REMARK 500 DT A 5 C2 DT A 5 N3 -0.077 REMARK 500 DT A 5 C4 DT A 5 C5 -0.102 REMARK 500 DT A 5 C6 DT A 5 N1 0.051 REMARK 500 DT A 5 C2 DT A 5 O2 0.090 REMARK 500 DT A 5 C4 DT A 5 O4 -0.074 REMARK 500 DT A 5 C5 DT A 5 C7 -0.043 REMARK 500 DA A 6 P DA A 6 OP1 -0.199 REMARK 500 DA A 6 P DA A 6 OP2 0.135 REMARK 500 DA A 6 P DA A 6 O5' -0.061 REMARK 500 DA A 6 C2 DA A 6 N3 -0.080 REMARK 500 DA A 6 N3 DA A 6 C4 -0.038 REMARK 500 DA A 6 C5 DA A 6 C6 0.124 REMARK 500 DA A 6 C6 DA A 6 N6 -0.162 REMARK 500 DC A 7 P DC A 7 O5' -0.109 REMARK 500 DC A 7 C2 DC A 7 O2 -0.060 REMARK 500 DC A 7 C4 DC A 7 N4 -0.088 REMARK 500 DC A 7 N1 DC A 7 C6 -0.073 REMARK 500 DC A 7 O3' DT A 8 P 0.132 REMARK 500 DT A 8 P DT A 8 OP2 0.176 REMARK 500 DT A 8 C2' DT A 8 C1' -0.110 REMARK 500 DT A 8 O4' DT A 8 C4' -0.115 REMARK 500 DT A 8 O3' DT A 8 C3' -0.040 REMARK 500 DT A 8 C5 DT A 8 C6 -0.079 REMARK 500 DT A 8 C2 DT A 8 O2 -0.119 REMARK 500 DT A 8 C5 DT A 8 C7 -0.092 REMARK 500 DG A 9 P DG A 9 OP1 -0.128 REMARK 500 DG A 9 P DG A 9 OP2 -0.143 REMARK 500 DG A 9 C2 DG A 9 N3 0.091 REMARK 500 DG A 9 N3 DG A 9 C4 -0.068 REMARK 500 DG A 9 C6 DG A 9 N1 -0.056 REMARK 500 DG A 9 C2 DG A 9 N2 0.149 REMARK 500 DG A 9 C6 DG A 9 O6 -0.091 REMARK 500 REMARK 500 THIS ENTRY HAS 59 BOND DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC A 1 O4' - C1' - N1 ANGL. DEV. = 3.9 DEGREES REMARK 500 DC A 1 N1 - C2 - N3 ANGL. DEV. = 5.6 DEGREES REMARK 500 DC A 1 N3 - C4 - C5 ANGL. DEV. = -3.2 DEGREES REMARK 500 DC A 1 N1 - C2 - O2 ANGL. DEV. = -4.9 DEGREES REMARK 500 DC A 2 O3' - P - OP2 ANGL. DEV. = 15.4 DEGREES REMARK 500 DC A 2 O5' - P - OP2 ANGL. DEV. = -8.3 DEGREES REMARK 500 DC A 2 C5' - C4' - C3' ANGL. DEV. = -11.8 DEGREES REMARK 500 DC A 2 C1' - O4' - C4' ANGL. DEV. = -8.0 DEGREES REMARK 500 DC A 2 O4' - C1' - N1 ANGL. DEV. = 7.4 DEGREES REMARK 500 DG A 4 O3' - P - OP2 ANGL. DEV. = 26.4 DEGREES REMARK 500 DG A 4 O3' - P - OP1 ANGL. DEV. = -28.7 DEGREES REMARK 500 DG A 4 O4' - C4' - C3' ANGL. DEV. = 3.7 DEGREES REMARK 500 DG A 4 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG A 4 N1 - C2 - N3 ANGL. DEV. = -3.9 DEGREES REMARK 500 DG A 4 C2 - N3 - C4 ANGL. DEV. = 3.3 DEGREES REMARK 500 DG A 4 C4 - C5 - N7 ANGL. DEV. = -3.2 DEGREES REMARK 500 DG A 4 C5 - N7 - C8 ANGL. DEV. = 3.2 DEGREES REMARK 500 DT A 5 O3' - P - OP2 ANGL. DEV. = 7.8 DEGREES REMARK 500 DT A 5 O4' - C4' - C3' ANGL. DEV. = 4.8 DEGREES REMARK 500 DT A 5 C2' - C3' - O3' ANGL. DEV. = -26.8 DEGREES REMARK 500 DT A 5 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DT A 5 C2 - N3 - C4 ANGL. DEV. = 4.8 DEGREES REMARK 500 DA A 6 O3' - P - OP1 ANGL. DEV. = -14.9 DEGREES REMARK 500 DA A 6 O5' - P - OP1 ANGL. DEV. = -7.4 DEGREES REMARK 500 DA A 6 O5' - P - OP2 ANGL. DEV. = 11.5 DEGREES REMARK 500 DA A 6 C1' - O4' - C4' ANGL. DEV. = 7.4 DEGREES REMARK 500 DA A 6 C6 - N1 - C2 ANGL. DEV. = -5.0 DEGREES REMARK 500 DA A 6 N1 - C2 - N3 ANGL. DEV. = 4.4 DEGREES REMARK 500 DA A 6 C2 - N3 - C4 ANGL. DEV. = 4.9 DEGREES REMARK 500 DA A 6 N3 - C4 - C5 ANGL. DEV. = -4.5 DEGREES REMARK 500 DA A 6 N7 - C8 - N9 ANGL. DEV. = 3.1 DEGREES REMARK 500 DC A 7 O3' - P - OP2 ANGL. DEV. = 13.6 DEGREES REMARK 500 DC A 7 O3' - P - OP1 ANGL. DEV. = -26.9 DEGREES REMARK 500 DC A 7 O5' - P - OP1 ANGL. DEV. = 18.6 DEGREES REMARK 500 DC A 7 O5' - P - OP2 ANGL. DEV. = -7.4 DEGREES REMARK 500 DC A 7 C5' - C4' - O4' ANGL. DEV. = -22.6 DEGREES REMARK 500 DC A 7 C2 - N3 - C4 ANGL. DEV. = -5.6 DEGREES REMARK 500 DT A 8 C1' - O4' - C4' ANGL. DEV. = 5.2 DEGREES REMARK 500 DG A 9 O3' - P - O5' ANGL. DEV. = 19.2 DEGREES REMARK 500 DG A 9 O3' - P - OP2 ANGL. DEV. = 13.0 DEGREES REMARK 500 DG A 9 O3' - P - OP1 ANGL. DEV. = -22.1 DEGREES REMARK 500 DG A 9 O5' - P - OP2 ANGL. DEV. = -8.6 DEGREES REMARK 500 DG A 9 O4' - C4' - C3' ANGL. DEV. = -4.3 DEGREES REMARK 500 DG A 9 C5' - C4' - O4' ANGL. DEV. = -12.4 DEGREES REMARK 500 DG A 9 C3' - C2' - C1' ANGL. DEV. = -8.2 DEGREES REMARK 500 DG A 9 O4' - C1' - C2' ANGL. DEV. = 5.5 DEGREES REMARK 500 DG A 9 C6 - C5 - N7 ANGL. DEV. = -4.3 DEGREES REMARK 500 DG A 10 O3' - P - O5' ANGL. DEV. = 14.0 DEGREES REMARK 500 DG A 10 O5' - P - OP1 ANGL. DEV. = -14.1 DEGREES REMARK 500 DG A 10 C5' - C4' - O4' ANGL. DEV. = 12.0 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 55 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DA A 6 0.09 SIDE CHAIN REMARK 500 DC A 7 0.13 SIDE CHAIN REMARK 500 DG A 9 0.08 SIDE CHAIN REMARK 500 DG A 10 0.12 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 15 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DT A 5 OP1 REMARK 620 2 HOH A 31 O 101.0 REMARK 620 3 HOH A 36 O 57.7 145.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 14 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC A 7 OP2 REMARK 620 2 DC A 7 OP2 169.6 REMARK 620 3 HOH A 23 O 105.6 72.0 REMARK 620 4 HOH A 28 O 81.5 104.3 159.0 REMARK 620 5 HOH A 28 O 102.5 84.2 52.3 107.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 11 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 20 O REMARK 620 2 HOH A 20 O 107.8 REMARK 620 3 HOH A 45 O 125.9 107.2 REMARK 620 4 HOH A 45 O 107.6 124.7 83.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 11 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 14 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 15 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1P4Z RELATED DB: PDB REMARK 900 UNMODIFIED ACT STRAND DBREF 1S1K A 1 10 PDB 1S1K 1S1K 1 10 SEQRES 1 A 10 DC DC 1AP DG DT DA DC DT DG DG MODRES 1S1K 1AP A 3 DA 2,6-DIAMINOPURINE NUCLEOTIDE HET 1AP A 3 22 HET CA A 11 1 HET CA A 14 1 HET NA A 15 1 HETNAM 1AP 2,6-DIAMINOPURINE NUCLEOTIDE HETNAM CA CALCIUM ION HETNAM NA SODIUM ION FORMUL 1 1AP C10 H15 N6 O6 P FORMUL 2 CA 2(CA 2+) FORMUL 4 NA NA 1+ FORMUL 5 HOH *40(H2 O) LINK O3' DC A 2 P 1AP A 3 1555 1555 1.63 LINK O3' 1AP A 3 P DG A 4 1555 1555 1.63 LINK O3' 1AP A 3 OP1 DG A 4 1555 1555 1.94 LINK OP1 DT A 5 NA NA A 15 1555 1555 2.50 LINK OP2 DC A 7 CA CA A 14 1555 1555 2.54 LINK OP2 DC A 7 CA CA A 14 8555 1555 2.45 LINK CA CA A 11 O HOH A 20 1555 1555 3.15 LINK CA CA A 11 O HOH A 20 1555 8555 3.17 LINK CA CA A 11 O HOH A 45 1555 1555 2.83 LINK CA CA A 11 O HOH A 45 1555 8555 2.84 LINK CA CA A 14 O HOH A 23 1555 8555 3.36 LINK CA CA A 14 O HOH A 28 1555 1555 2.38 LINK CA CA A 14 O HOH A 28 1555 8555 2.34 LINK NA NA A 15 O HOH A 31 1555 1555 1.80 LINK NA NA A 15 O HOH A 36 1555 1555 2.73 SITE 1 AC1 1 HOH A 45 SITE 1 AC2 2 DC A 7 HOH A 28 SITE 1 AC3 3 DT A 5 HOH A 31 HOH A 36 CRYST1 32.957 32.957 88.556 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.030343 0.017518 0.000000 0.00000 SCALE2 0.000000 0.035037 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011292 0.00000 ATOM 1 O5' DC A 1 38.025 -13.246 14.559 1.00 16.83 O ATOM 2 C5' DC A 1 39.465 -13.354 14.416 1.00 15.99 C ATOM 3 C4' DC A 1 40.164 -13.198 13.073 1.00 16.06 C ATOM 4 O4' DC A 1 39.669 -14.121 12.032 1.00 15.10 O ATOM 5 C3' DC A 1 39.956 -11.747 12.600 1.00 16.57 C ATOM 6 O3' DC A 1 41.078 -11.063 11.978 1.00 19.07 O ATOM 7 C2' DC A 1 38.751 -11.822 11.774 1.00 15.21 C ATOM 8 C1' DC A 1 38.871 -13.283 11.117 1.00 14.84 C ATOM 9 N1 DC A 1 37.520 -13.943 10.749 1.00 13.64 N ATOM 10 C2 DC A 1 37.302 -14.347 9.461 1.00 13.57 C ATOM 11 O2 DC A 1 38.160 -14.010 8.691 1.00 14.79 O ATOM 12 N3 DC A 1 36.170 -15.042 9.024 1.00 12.77 N ATOM 13 C4 DC A 1 35.184 -15.309 9.872 1.00 12.82 C ATOM 14 N4 DC A 1 34.026 -15.809 9.431 1.00 10.67 N ATOM 15 C5 DC A 1 35.352 -14.943 11.294 1.00 13.91 C ATOM 16 C6 DC A 1 36.547 -14.183 11.665 1.00 14.09 C ATOM 17 P DC A 2 41.213 -9.445 12.110 1.00 20.16 P ATOM 18 OP1 DC A 2 42.543 -9.006 12.200 1.00 21.61 O ATOM 19 OP2 DC A 2 40.109 -8.457 12.715 1.00 22.26 O ATOM 20 O5' DC A 2 40.863 -9.211 10.529 1.00 21.74 O ATOM 21 C5' DC A 2 41.919 -9.212 9.607 1.00 19.60 C ATOM 22 C4' DC A 2 41.278 -9.154 8.279 1.00 20.08 C ATOM 23 O4' DC A 2 40.298 -10.229 8.140 1.00 19.34 O ATOM 24 C3' DC A 2 40.509 -7.814 8.344 1.00 20.56 C ATOM 25 O3' DC A 2 40.181 -7.232 7.111 1.00 20.00 O ATOM 26 C2' DC A 2 39.160 -8.282 8.683 1.00 20.99 C ATOM 27 C1' DC A 2 39.110 -9.508 7.764 1.00 19.77 C ATOM 28 N1 DC A 2 37.844 -10.162 8.086 1.00 18.61 N ATOM 29 C2 DC A 2 37.007 -10.812 7.053 1.00 18.54 C ATOM 30 O2 DC A 2 37.330 -10.787 5.849 1.00 19.89 O ATOM 31 N3 DC A 2 35.870 -11.397 7.437 1.00 17.84 N ATOM 32 C4 DC A 2 35.512 -11.364 8.741 1.00 17.92 C ATOM 33 N4 DC A 2 34.324 -12.064 9.161 1.00 17.74 N ATOM 34 C5 DC A 2 36.293 -10.650 9.715 1.00 16.89 C ATOM 35 C6 DC A 2 37.403 -10.107 9.350 1.00 17.87 C HETATM 36 N1 1AP A 3 33.295 -9.235 5.742 1.00 7.08 N HETATM 37 C2 1AP A 3 33.684 -9.149 4.591 1.00 7.34 C HETATM 38 C4 1AP A 3 35.431 -7.854 4.951 1.00 8.88 C HETATM 39 C5 1AP A 3 35.198 -7.962 6.281 1.00 8.32 C HETATM 40 C6 1AP A 3 33.986 -8.647 6.635 1.00 7.90 C HETATM 41 C8 1AP A 3 36.734 -6.355 6.155 1.00 10.28 C HETATM 42 N2 1AP A 3 33.206 -10.029 3.989 1.00 10.99 N HETATM 43 N3 1AP A 3 34.616 -8.510 4.042 1.00 7.54 N HETATM 44 N9 1AP A 3 36.509 -6.850 4.791 1.00 10.34 N HETATM 45 N7 1AP A 3 36.100 -7.173 7.056 1.00 9.27 N HETATM 46 N6 1AP A 3 33.527 -8.738 7.662 1.00 8.32 N HETATM 47 P 1AP A 3 40.587 -5.684 6.826 1.00 22.89 P HETATM 48 OP1 1AP A 3 42.011 -5.701 7.030 1.00 23.07 O HETATM 49 OP2 1AP A 3 39.782 -4.717 7.670 1.00 24.05 O HETATM 50 O5' 1AP A 3 40.166 -5.600 5.216 1.00 20.15 O HETATM 51 C5' 1AP A 3 40.525 -6.756 4.167 1.00 18.39 C HETATM 52 C4' 1AP A 3 39.555 -6.872 2.965 1.00 16.47 C HETATM 53 O4' 1AP A 3 38.247 -7.344 3.441 1.00 15.23 O HETATM 54 C1' 1AP A 3 37.357 -6.469 3.648 1.00 11.82 C HETATM 55 C2' 1AP A 3 38.012 -5.176 3.387 1.00 13.81 C HETATM 56 C3' 1AP A 3 39.176 -5.503 2.456 1.00 16.25 C HETATM 57 O3' 1AP A 3 38.828 -5.389 1.068 1.00 17.15 O ATOM 58 P DG A 4 38.073 -4.020 0.592 1.00 17.61 P ATOM 59 OP1 DG A 4 38.853 -4.420 -0.607 1.00 17.00 O ATOM 60 OP2 DG A 4 38.014 -2.657 1.021 1.00 16.42 O ATOM 61 O5' DG A 4 36.506 -4.573 0.536 1.00 16.61 O ATOM 62 C5' DG A 4 36.158 -5.610 -0.281 1.00 11.55 C ATOM 63 C4' DG A 4 34.708 -5.888 -0.145 1.00 8.22 C ATOM 64 O4' DG A 4 34.556 -6.186 1.297 1.00 7.91 O ATOM 65 C3' DG A 4 33.742 -4.740 -0.547 1.00 8.96 C ATOM 66 O3' DG A 4 32.797 -5.140 -1.342 1.00 7.74 O ATOM 67 C2' DG A 4 33.063 -4.322 0.821 1.00 8.81 C ATOM 68 C1' DG A 4 33.290 -5.605 1.692 1.00 7.04 C ATOM 69 N9 DG A 4 33.291 -5.299 3.153 1.00 6.36 N ATOM 70 C8 DG A 4 34.096 -4.625 3.883 1.00 5.03 C ATOM 71 N7 DG A 4 33.758 -4.693 5.112 1.00 7.86 N ATOM 72 C5 DG A 4 32.665 -5.555 5.199 1.00 6.44 C ATOM 73 C6 DG A 4 31.871 -6.043 6.338 1.00 6.48 C ATOM 74 O6 DG A 4 32.031 -5.805 7.541 1.00 5.95 O ATOM 75 N1 DG A 4 30.840 -6.897 5.937 1.00 6.92 N ATOM 76 C2 DG A 4 30.620 -7.270 4.591 1.00 7.08 C ATOM 77 N2 DG A 4 29.717 -8.255 4.274 1.00 8.02 N ATOM 78 N3 DG A 4 31.384 -6.709 3.585 1.00 6.87 N ATOM 79 C4 DG A 4 32.335 -5.894 3.992 1.00 6.10 C ATOM 80 P DT A 5 31.890 -4.094 -1.983 1.00 9.49 P ATOM 81 OP1 DT A 5 31.477 -4.589 -3.285 1.00 9.85 O ATOM 82 OP2 DT A 5 32.326 -2.700 -1.971 1.00 12.25 O ATOM 83 O5' DT A 5 30.532 -4.121 -1.217 1.00 9.22 O ATOM 84 C5' DT A 5 29.754 -5.262 -1.332 1.00 6.06 C ATOM 85 C4' DT A 5 28.565 -5.127 -0.474 1.00 6.21 C ATOM 86 O4' DT A 5 29.192 -5.194 0.843 1.00 4.61 O ATOM 87 C3' DT A 5 27.730 -3.865 -0.612 1.00 6.34 C ATOM 88 O3' DT A 5 26.538 -4.057 -0.271 1.00 8.53 O ATOM 89 C2' DT A 5 27.820 -3.272 0.740 1.00 5.72 C ATOM 90 C1' DT A 5 28.345 -4.516 1.660 1.00 5.04 C ATOM 91 N1 DT A 5 29.091 -4.067 2.995 1.00 6.39 N ATOM 92 C2 DT A 5 28.525 -4.479 4.180 1.00 5.55 C ATOM 93 O2 DT A 5 27.548 -5.347 4.273 1.00 5.71 O ATOM 94 N3 DT A 5 29.102 -3.919 5.196 1.00 6.27 N ATOM 95 C4 DT A 5 30.256 -3.112 5.301 1.00 6.92 C ATOM 96 O4 DT A 5 30.698 -2.871 6.339 1.00 7.03 O ATOM 97 C5 DT A 5 30.822 -2.770 4.132 1.00 5.91 C ATOM 98 C7 DT A 5 32.027 -1.959 4.157 1.00 9.36 C ATOM 99 C6 DT A 5 30.250 -3.232 3.043 1.00 6.55 C ATOM 100 P DA A 6 25.366 -3.274 -0.931 1.00 10.00 P ATOM 101 OP1 DA A 6 25.452 -4.015 -1.978 1.00 11.86 O ATOM 102 OP2 DA A 6 25.748 -1.700 -0.936 1.00 14.00 O ATOM 103 O5' DA A 6 24.020 -3.786 -0.409 1.00 9.96 O ATOM 104 C5' DA A 6 23.752 -5.077 0.134 1.00 8.57 C ATOM 105 C4' DA A 6 22.821 -4.922 1.301 1.00 8.71 C ATOM 106 O4' DA A 6 23.617 -4.520 2.392 1.00 8.40 O ATOM 107 C3' DA A 6 21.726 -3.931 1.309 1.00 11.15 C ATOM 108 O3' DA A 6 20.617 -4.376 2.063 1.00 13.86 O ATOM 109 C2' DA A 6 22.257 -2.784 2.194 1.00 10.24 C ATOM 110 C1' DA A 6 23.234 -3.419 3.077 1.00 8.75 C ATOM 111 N9 DA A 6 24.517 -2.663 3.519 1.00 6.02 N ATOM 112 C8 DA A 6 25.448 -2.146 2.714 1.00 6.64 C ATOM 113 N7 DA A 6 26.467 -1.629 3.271 1.00 4.57 N ATOM 114 C5 DA A 6 26.141 -1.756 4.638 1.00 5.13 C ATOM 115 C6 DA A 6 26.841 -1.305 5.922 1.00 3.26 C ATOM 116 N6 DA A 6 27.789 -0.614 5.903 1.00 2.47 N ATOM 117 N1 DA A 6 26.365 -1.749 7.067 1.00 3.69 N ATOM 118 C2 DA A 6 25.328 -2.576 6.930 1.00 2.47 C ATOM 119 N3 DA A 6 24.624 -2.925 5.956 1.00 3.33 N ATOM 120 C4 DA A 6 25.013 -2.477 4.792 1.00 5.01 C ATOM 121 P DC A 7 19.255 -3.418 2.094 1.00 15.39 P ATOM 122 OP1 DC A 7 18.704 -4.729 1.470 1.00 15.50 O ATOM 123 OP2 DC A 7 19.119 -2.094 1.335 1.00 15.81 O ATOM 124 O5' DC A 7 19.093 -2.893 3.473 1.00 13.91 O ATOM 125 C5' DC A 7 20.181 -2.994 4.328 1.00 15.53 C ATOM 126 C4' DC A 7 19.763 -2.534 5.701 1.00 14.47 C ATOM 127 O4' DC A 7 21.039 -1.976 5.815 1.00 12.70 O ATOM 128 C3' DC A 7 18.748 -1.398 5.722 1.00 15.61 C ATOM 129 O3' DC A 7 17.855 -1.301 6.850 1.00 19.64 O ATOM 130 C2' DC A 7 19.558 -0.198 5.431 1.00 12.66 C ATOM 131 C1' DC A 7 20.862 -0.636 6.030 1.00 11.52 C ATOM 132 N1 DC A 7 22.103 -0.003 5.674 1.00 8.30 N ATOM 133 C2 DC A 7 23.065 0.242 6.709 1.00 8.33 C ATOM 134 O2 DC A 7 22.910 -0.336 7.726 1.00 7.47 O ATOM 135 N3 DC A 7 24.175 1.056 6.489 1.00 5.73 N ATOM 136 C4 DC A 7 24.452 1.256 5.230 1.00 6.86 C ATOM 137 N4 DC A 7 25.502 1.848 4.911 1.00 4.77 N ATOM 138 C5 DC A 7 23.593 0.794 4.156 1.00 7.57 C ATOM 139 C6 DC A 7 22.368 0.304 4.445 1.00 7.15 C ATOM 140 P DT A 8 16.695 -0.014 7.004 1.00 22.98 P ATOM 141 OP1 DT A 8 15.323 -0.583 6.849 1.00 22.38 O ATOM 142 OP2 DT A 8 16.937 1.290 6.004 1.00 22.69 O ATOM 143 O5' DT A 8 16.998 0.508 8.475 1.00 19.51 O ATOM 144 C5' DT A 8 17.957 -0.195 9.316 1.00 16.17 C ATOM 145 C4' DT A 8 18.216 0.665 10.515 1.00 13.80 C ATOM 146 O4' DT A 8 19.385 1.271 10.322 1.00 11.88 O ATOM 147 C3' DT A 8 17.281 1.764 10.804 1.00 13.11 C ATOM 148 O3' DT A 8 16.979 1.722 12.149 1.00 12.28 O ATOM 149 C2' DT A 8 17.961 2.987 10.144 1.00 12.37 C ATOM 150 C1' DT A 8 19.327 2.646 10.179 1.00 10.81 C ATOM 151 N1 DT A 8 20.265 3.043 9.027 1.00 9.66 N ATOM 152 C2 DT A 8 21.551 3.468 9.372 1.00 8.92 C ATOM 153 O2 DT A 8 21.913 3.566 10.407 1.00 9.59 O ATOM 154 N3 DT A 8 22.371 3.772 8.340 1.00 8.48 N ATOM 155 C4 DT A 8 22.048 3.701 7.011 1.00 8.28 C ATOM 156 O4 DT A 8 22.879 4.040 6.235 1.00 8.19 O ATOM 157 C5 DT A 8 20.701 3.292 6.748 1.00 7.17 C ATOM 158 C7 DT A 8 20.262 3.265 5.415 1.00 8.53 C ATOM 159 C6 DT A 8 19.918 2.992 7.689 1.00 7.97 C ATOM 160 P DG A 9 16.471 3.057 13.016 1.00 13.37 P ATOM 161 OP1 DG A 9 15.816 2.124 13.753 1.00 13.24 O ATOM 162 OP2 DG A 9 15.860 4.114 12.458 1.00 14.04 O ATOM 163 O5' DG A 9 17.400 3.854 13.971 1.00 11.45 O ATOM 164 C5' DG A 9 18.660 3.972 13.792 1.00 12.89 C ATOM 165 C4' DG A 9 19.221 5.056 14.700 1.00 12.33 C ATOM 166 O4' DG A 9 20.034 5.670 13.746 1.00 13.65 O ATOM 167 C3' DG A 9 18.390 6.257 15.160 1.00 13.38 C ATOM 168 O3' DG A 9 19.048 6.955 16.177 1.00 16.23 O ATOM 169 C2' DG A 9 18.013 6.952 13.899 1.00 12.03 C ATOM 170 C1' DG A 9 19.374 6.767 13.258 1.00 12.26 C ATOM 171 N9 DG A 9 19.530 6.753 11.845 1.00 10.47 N ATOM 172 C8 DG A 9 18.637 6.255 10.928 1.00 11.17 C ATOM 173 N7 DG A 9 19.118 6.307 9.732 1.00 10.95 N ATOM 174 C5 DG A 9 20.353 6.955 9.896 1.00 9.78 C ATOM 175 C6 DG A 9 21.298 7.143 8.928 1.00 8.26 C ATOM 176 O6 DG A 9 21.236 6.740 7.857 1.00 6.86 O ATOM 177 N1 DG A 9 22.413 7.671 9.437 1.00 8.38 N ATOM 178 C2 DG A 9 22.674 7.841 10.740 1.00 8.18 C ATOM 179 N2 DG A 9 24.055 8.295 11.068 1.00 7.10 N ATOM 180 N3 DG A 9 21.709 7.575 11.738 1.00 9.17 N ATOM 181 C4 DG A 9 20.616 7.185 11.193 1.00 9.33 C ATOM 182 P DG A 10 18.468 8.406 16.711 1.00 19.70 P ATOM 183 OP1 DG A 10 18.467 8.413 18.141 1.00 18.26 O ATOM 184 OP2 DG A 10 17.213 8.600 15.813 1.00 19.63 O ATOM 185 O5' DG A 10 19.386 9.590 16.665 1.00 18.09 O ATOM 186 C5' DG A 10 20.611 9.375 16.288 1.00 19.76 C ATOM 187 C4' DG A 10 21.070 10.601 15.536 1.00 19.86 C ATOM 188 O4' DG A 10 21.424 10.548 14.099 1.00 18.34 O ATOM 189 C3' DG A 10 20.120 11.790 15.724 1.00 19.24 C ATOM 190 O3' DG A 10 21.142 12.526 15.374 1.00 19.28 O ATOM 191 C2' DG A 10 19.316 11.727 14.465 1.00 18.92 C ATOM 192 C1' DG A 10 20.425 11.450 13.446 1.00 17.45 C ATOM 193 N9 DG A 10 19.941 10.852 12.185 1.00 16.35 N ATOM 194 C8 DG A 10 18.912 10.010 11.968 1.00 15.57 C ATOM 195 N7 DG A 10 18.818 9.587 10.725 1.00 14.02 N ATOM 196 C5 DG A 10 19.776 10.252 10.059 1.00 15.23 C ATOM 197 C6 DG A 10 20.108 10.198 8.755 1.00 14.30 C ATOM 198 O6 DG A 10 19.411 9.759 7.826 1.00 15.49 O ATOM 199 N1 DG A 10 21.306 10.727 8.518 1.00 14.71 N ATOM 200 C2 DG A 10 22.189 11.409 9.323 1.00 15.58 C ATOM 201 N2 DG A 10 23.438 11.792 8.753 1.00 15.40 N ATOM 202 N3 DG A 10 21.884 11.663 10.603 1.00 16.36 N ATOM 203 C4 DG A 10 20.582 11.004 10.923 1.00 16.49 C TER 204 DG A 10 HETATM 205 CA CA A 11 29.496 -0.007 0.017 0.50 20.92 CA HETATM 206 CA CA A 14 19.344 0.033 -0.034 0.50 8.99 CA HETATM 207 NA NA A 15 31.335 -4.168 -5.747 1.00 7.49 NA HETATM 208 O HOH A 12 40.749 -11.899 4.100 1.00 4.39 O HETATM 209 O HOH A 13 35.246 -10.662 -0.225 1.00 6.63 O HETATM 210 O HOH A 16 14.974 0.198 13.640 1.00 21.84 O HETATM 211 O HOH A 17 35.661 -12.708 14.227 1.00 9.94 O HETATM 212 O HOH A 18 20.548 3.060 2.259 1.00 12.63 O HETATM 213 O HOH A 19 28.218 -7.915 1.868 1.00 13.89 O HETATM 214 O HOH A 20 27.634 0.733 2.447 1.00 10.48 O HETATM 215 O HOH A 21 38.707 -9.843 4.179 1.00 23.35 O HETATM 216 O HOH A 22 22.616 -4.579 -3.448 1.00 12.41 O HETATM 217 O HOH A 23 18.461 0.806 3.160 1.00 21.89 O HETATM 218 O HOH A 24 42.432 -4.953 -8.496 1.00 25.84 O HETATM 219 O HOH A 25 36.176 -9.464 12.929 1.00 18.01 O HETATM 220 O HOH A 26 14.786 9.269 8.653 1.00 36.96 O HETATM 221 O HOH A 27 33.409 -11.686 0.543 1.00 8.85 O HETATM 222 O HOH A 28 20.743 0.640 1.787 1.00 18.31 O HETATM 223 O HOH A 29 39.350 -1.694 3.067 1.00 7.43 O HETATM 224 O HOH A 30 41.792 -13.299 8.477 1.00 13.54 O HETATM 225 O HOH A 31 30.378 -2.650 -5.780 1.00 20.32 O HETATM 226 O HOH A 32 13.213 7.636 7.381 0.50 18.98 O HETATM 227 O HOH A 33 41.510 -5.622 10.465 1.00 25.30 O HETATM 228 O HOH A 34 14.003 -1.229 3.377 1.00 22.98 O HETATM 229 O HOH A 35 33.678 -8.898 -0.096 1.00 23.78 O HETATM 230 O HOH A 36 31.510 -6.686 -4.704 1.00 22.58 O HETATM 231 O HOH A 37 24.191 -0.656 -0.134 1.00 37.03 O HETATM 232 O HOH A 38 34.683 -1.165 2.647 1.00 24.06 O HETATM 233 O HOH A 41 32.931 -8.376 -2.000 1.00 36.03 O HETATM 234 O HOH A 42 29.573 0.976 3.630 1.00 17.71 O HETATM 235 O HOH A 43 16.836 9.152 19.774 1.00 23.82 O HETATM 236 O HOH A 44 43.030 -7.799 2.365 1.00 27.29 O HETATM 237 O HOH A 45 31.606 -1.893 0.056 1.00 35.98 O HETATM 238 O HOH A 46 43.828 -2.826 -5.187 1.00 30.44 O HETATM 239 O HOH A 47 43.285 -7.288 5.941 1.00 26.21 O HETATM 240 O HOH A 48 40.565 -11.654 6.722 1.00 36.32 O HETATM 241 O HOH A 49 26.408 -5.732 2.547 1.00 23.34 O HETATM 242 O HOH A 50 35.838 -2.883 -3.092 1.00 21.87 O HETATM 243 O HOH A 51 39.373 -1.951 -5.555 1.00 26.86 O HETATM 244 O HOH A 52 36.769 -0.645 -7.025 1.00 25.74 O HETATM 245 O HOH A 53 15.109 6.478 12.863 1.00 49.09 O HETATM 246 O HOH A 54 14.190 7.554 19.893 1.00 34.14 O HETATM 247 O HOH A 55 41.192 -9.062 5.836 1.00 35.13 O CONECT 25 47 CONECT 36 37 40 CONECT 37 36 42 43 CONECT 38 39 43 44 CONECT 39 38 40 45 CONECT 40 36 39 46 CONECT 41 44 45 CONECT 42 37 CONECT 43 37 38 CONECT 44 38 41 54 CONECT 45 39 41 CONECT 46 40 CONECT 47 25 48 49 50 CONECT 48 47 CONECT 49 47 CONECT 50 47 51 CONECT 51 50 52 CONECT 52 51 53 56 CONECT 53 52 54 CONECT 54 44 53 55 CONECT 55 54 56 CONECT 56 52 55 57 CONECT 57 56 58 59 CONECT 58 57 CONECT 59 57 CONECT 81 207 CONECT 123 206 CONECT 205 214 237 CONECT 206 123 222 CONECT 207 81 225 230 CONECT 214 205 CONECT 222 206 CONECT 225 207 CONECT 230 207 CONECT 237 205 MASTER 496 0 4 0 0 0 3 6 246 1 35 1 END