data_1V3O # _entry.id 1V3O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1V3O pdb_00001v3o 10.2210/pdb1v3o/pdb NDB UD0047 ? ? RCSB RCSB006165 ? ? WWPDB D_1000006165 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1V3N 'The same structure, Br-derivative' unspecified PDB 1V3P 'The same structure, I-derivative, with I-motif of G-quartet' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1V3O _pdbx_database_status.recvd_initial_deposition_date 2003-11-03 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kondo, J.' 1 'Umeda, S.' 2 'Sunami, T.' 3 'Takenaka, A.' 4 # _citation.id primary _citation.title ;Crystal structures of a DNA octaplex with I-motif of G-quartets and its splitting into two quadruplexes suggest a folding mechanism of eight tandem repeats ; _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 32 _citation.page_first 2541 _citation.page_last 2549 _citation.year 2004 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15133122 _citation.pdbx_database_id_DOI 10.1093/nar/gkh575 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kondo, J.' 1 ? primary 'Adachi, W.' 2 ? primary 'Umeda, S.' 3 ? primary 'Sunami, T.' 4 ? primary 'Takenaka, A.' 5 ? # _cell.entry_id 1V3O _cell.length_a 34.650 _cell.length_b 42.490 _cell.length_c 64.080 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1V3O _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*(C38)P*GP*AP*GP*AP*GP*C)-3'" 2602.540 2 ? ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 3 water nat water 18.015 87 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DG)(C38)(DG)(DA)(DG)(DA)(DG)(DC)' _entity_poly.pdbx_seq_one_letter_code_can GCGAGAGC _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 C38 n 1 3 DG n 1 4 DA n 1 5 DG n 1 6 DA n 1 7 DG n 1 8 DC n # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1V3O _struct_ref.pdbx_db_accession 1V3O _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1V3O A 1 ? 8 ? 1V3O 1 ? 8 ? 1 8 2 1 1V3O B 1 ? 8 ? 1V3O 9 ? 16 ? 9 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight C38 'DNA linking' n "5-IODO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 I N3 O7 P' 433.094 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 # _exptl.entry_id 1V3O _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.17 _exptl_crystal.density_percent_sol 43.37 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details ;2-methyl-2,4-pentanediol, spermine tetrahydrochloride, sodium chloride, potassium chloride, sodium cacodylate , pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 2-methyl-2,4-pentanediol ? ? ? 1 2 1 'spermine tetrahydrochloride' ? ? ? 1 3 1 'sodium chloride' ? ? ? 1 4 1 'potassium chloride' ? ? ? 1 5 1 'sodium cacodylate' ? ? ? 1 6 2 'sodium chloride' ? ? ? 1 7 2 'potassium chloride' ? ? ? 1 8 2 'sodium cacodylate' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'OXFORD PX210' _diffrn_detector.pdbx_collection_date 2001-03-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.90 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL44XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL44XU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.90 # _reflns.entry_id 1V3O _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 1.7 _reflns.d_resolution_low 35 _reflns.number_all 5463 _reflns.number_obs 5269 _reflns.percent_possible_obs 96.5 _reflns.pdbx_Rmerge_I_obs 0.096 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 4.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.7 _reflns_shell.d_res_low 1.76 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.137 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.9 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 527 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1V3O _refine.ls_d_res_high 1.7 _refine.ls_d_res_low 9.0 _refine.pdbx_ls_sigma_F 3.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 5414 _refine.ls_number_reflns_obs 5063 _refine.ls_number_reflns_R_free 528 _refine.ls_percent_reflns_obs 93.5 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.262 _refine.ls_R_factor_R_free 0.296 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB ENTRY 1V3N' _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'G. PARKINSON ET AL., (1996) ACTACRYST. D52, 57-64' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1V3O _refine_analyze.Luzzati_coordinate_error_obs 0.40 _refine_analyze.Luzzati_sigma_a_obs 0.60 _refine_analyze.Luzzati_d_res_low_obs 5.0 _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 332 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 87 _refine_hist.number_atoms_total 420 _refine_hist.d_res_high 1.7 _refine_hist.d_res_low 9.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.004 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 0.9 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.6 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.8 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.7 _refine_ls_shell.d_res_low 1.76 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.5554 _refine_ls_shell.percent_reflns_obs 90.4 _refine_ls_shell.R_factor_R_free 0.6045 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 50 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 1V3O _struct.title 'Crystal structure of d(GCGAGAGC): the DNA quadruplex structure split from the octaplex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1V3O _struct_keywords.pdbx_keywords DNA _struct_keywords.text ;octaplex, quadruplex, G-duet, base-intercalated duplex, base-intercalated motif, sheared G:A pair, DNA, deoxyribonucleic acid, X-ray analysis ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_biol.id 1 _struct_biol.details 'The biological assembly is a quadruplex generated from the duplex in the asymmetric unit by the operations: x, y, z and -x, y, -z.' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DG 1 "O3'" ? ? ? 1_555 A C38 2 P ? ? A DG 1 A C38 2 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale2 covale one ? A C38 2 "O3'" ? ? ? 1_555 A DG 3 P ? ? A C38 2 A DG 3 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale3 covale both ? B DG 1 "O3'" ? ? ? 1_555 B C38 2 P ? ? B DG 9 B C38 10 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale4 covale one ? B C38 2 "O3'" ? ? ? 1_555 B DG 3 P ? ? B C38 10 B DG 11 1_555 ? ? ? ? ? ? ? 1.604 ? ? metalc1 metalc ? ? A DG 5 O6 ? ? ? 1_555 C K . K ? ? A DG 5 A K 104 1_555 ? ? ? ? ? ? ? 2.674 ? ? metalc2 metalc ? ? A DG 5 O6 ? ? ? 3_555 C K . K ? ? A DG 5 A K 104 1_555 ? ? ? ? ? ? ? 2.674 ? ? metalc3 metalc ? ? D HOH . O ? ? ? 1_555 C K . K ? ? A HOH 25 A K 104 1_555 ? ? ? ? ? ? ? 3.025 ? ? metalc4 metalc ? ? D HOH . O ? ? ? 3_555 C K . K ? ? A HOH 25 A K 104 1_555 ? ? ? ? ? ? ? 3.025 ? ? metalc5 metalc ? ? C K . K ? ? ? 1_555 B DG 5 O6 ? ? A K 104 B DG 13 1_555 ? ? ? ? ? ? ? 2.888 ? ? metalc6 metalc ? ? C K . K ? ? ? 1_555 B DG 5 O6 ? ? A K 104 B DG 13 3_555 ? ? ? ? ? ? ? 2.888 ? ? metalc7 metalc ? ? C K . K ? ? ? 1_555 E HOH . O ? ? A K 104 B HOH 97 1_555 ? ? ? ? ? ? ? 3.166 ? ? metalc8 metalc ? ? C K . K ? ? ? 1_555 E HOH . O ? ? A K 104 B HOH 97 3_555 ? ? ? ? ? ? ? 3.166 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 1 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 1 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 1 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C38 2 N3 ? ? ? 1_555 B DG 7 N1 ? ? A C38 2 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C38 2 N4 ? ? ? 1_555 B DG 7 O6 ? ? A C38 2 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C38 2 O2 ? ? ? 1_555 B DG 7 N2 ? ? A C38 2 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DA 6 N7 ? ? A DG 3 B DA 14 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog8 hydrog ? ? A DG 3 N3 ? ? ? 1_555 B DA 6 N6 ? ? A DG 3 B DA 14 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog9 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DG 3 N3 ? ? A DA 6 B DG 11 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog10 hydrog ? ? A DA 6 N7 ? ? ? 1_555 B DG 3 N2 ? ? A DA 6 B DG 11 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog11 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B C38 2 N3 ? ? A DG 7 B C38 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B C38 2 O2 ? ? A DG 7 B C38 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B C38 2 N4 ? ? A DG 7 B C38 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 8 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 8 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 8 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id K _struct_site.pdbx_auth_seq_id 104 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE K A 104' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 DG A 5 ? DG A 5 . ? 3_555 ? 2 AC1 6 DG A 5 ? DG A 5 . ? 1_555 ? 3 AC1 6 HOH D . ? HOH A 25 . ? 3_555 ? 4 AC1 6 HOH D . ? HOH A 25 . ? 1_555 ? 5 AC1 6 DG B 5 ? DG B 13 . ? 1_555 ? 6 AC1 6 DG B 5 ? DG B 13 . ? 3_555 ? # _database_PDB_matrix.entry_id 1V3O _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1V3O _atom_sites.fract_transf_matrix[1][1] 0.028860 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023535 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015605 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C I K N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? 0.584 9.198 19.652 1.00 50.95 ? 1 DG A "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? -0.152 9.154 18.429 1.00 47.70 ? 1 DG A "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? -0.713 10.523 18.132 1.00 42.38 ? 1 DG A "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? 0.378 11.459 18.003 1.00 34.41 ? 1 DG A "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? -1.486 10.632 16.825 1.00 40.88 ? 1 DG A "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? -2.413 11.718 16.917 1.00 50.01 ? 1 DG A "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? -0.392 10.948 15.825 1.00 42.25 ? 1 DG A "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? 0.563 11.816 16.638 1.00 43.45 ? 1 DG A "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? 1.971 11.619 16.326 1.00 41.58 ? 1 DG A N9 1 ATOM 10 C C8 . DG A 1 1 ? 2.637 10.419 16.240 1.00 46.30 ? 1 DG A C8 1 ATOM 11 N N7 . DG A 1 1 ? 3.906 10.555 15.974 1.00 45.12 ? 1 DG A N7 1 ATOM 12 C C5 . DG A 1 1 ? 4.092 11.930 15.873 1.00 42.61 ? 1 DG A C5 1 ATOM 13 C C6 . DG A 1 1 ? 5.265 12.681 15.603 1.00 36.11 ? 1 DG A C6 1 ATOM 14 O O6 . DG A 1 1 ? 6.415 12.269 15.402 1.00 37.24 ? 1 DG A O6 1 ATOM 15 N N1 . DG A 1 1 ? 5.002 14.047 15.581 1.00 30.05 ? 1 DG A N1 1 ATOM 16 C C2 . DG A 1 1 ? 3.772 14.618 15.795 1.00 27.69 ? 1 DG A C2 1 ATOM 17 N N2 . DG A 1 1 ? 3.719 15.952 15.728 1.00 34.31 ? 1 DG A N2 1 ATOM 18 N N3 . DG A 1 1 ? 2.674 13.931 16.054 1.00 38.17 ? 1 DG A N3 1 ATOM 19 C C4 . DG A 1 1 ? 2.905 12.597 16.077 1.00 36.78 ? 1 DG A C4 1 HETATM 20 P P . C38 A 1 2 ? -3.669 11.782 15.918 1.00 51.20 ? 2 C38 A P 1 HETATM 21 O O1P . C38 A 1 2 ? -4.000 10.380 15.555 1.00 54.32 ? 2 C38 A O1P 1 HETATM 22 O O2P . C38 A 1 2 ? -4.711 12.648 16.528 1.00 54.65 ? 2 C38 A O2P 1 HETATM 23 O "O5'" . C38 A 1 2 ? -3.100 12.537 14.640 1.00 48.76 ? 2 C38 A "O5'" 1 HETATM 24 C "C5'" . C38 A 1 2 ? -2.893 13.939 14.683 1.00 47.26 ? 2 C38 A "C5'" 1 HETATM 25 C "C4'" . C38 A 1 2 ? -1.950 14.366 13.585 1.00 43.33 ? 2 C38 A "C4'" 1 HETATM 26 O "O4'" . C38 A 1 2 ? -0.649 13.780 13.754 1.00 44.46 ? 2 C38 A "O4'" 1 HETATM 27 C "C3'" . C38 A 1 2 ? -2.368 14.032 12.152 1.00 52.33 ? 2 C38 A "C3'" 1 HETATM 28 O "O3'" . C38 A 1 2 ? -2.795 15.246 11.524 1.00 57.24 ? 2 C38 A "O3'" 1 HETATM 29 C "C2'" . C38 A 1 2 ? -1.097 13.482 11.507 1.00 45.48 ? 2 C38 A "C2'" 1 HETATM 30 C "C1'" . C38 A 1 2 ? -0.019 13.865 12.501 1.00 40.34 ? 2 C38 A "C1'" 1 HETATM 31 N N1 . C38 A 1 2 ? 1.199 13.040 12.545 1.00 35.73 ? 2 C38 A N1 1 HETATM 32 C C2 . C38 A 1 2 ? 2.430 13.701 12.515 1.00 31.88 ? 2 C38 A C2 1 HETATM 33 O O2 . C38 A 1 2 ? 2.438 14.941 12.446 1.00 33.15 ? 2 C38 A O2 1 HETATM 34 N N3 . C38 A 1 2 ? 3.573 12.983 12.566 1.00 29.50 ? 2 C38 A N3 1 HETATM 35 C C4 . C38 A 1 2 ? 3.518 11.652 12.649 1.00 38.44 ? 2 C38 A C4 1 HETATM 36 N N4 . C38 A 1 2 ? 4.670 10.981 12.696 1.00 30.90 ? 2 C38 A N4 1 HETATM 37 C C5 . C38 A 1 2 ? 2.275 10.950 12.684 1.00 23.32 ? 2 C38 A C5 1 HETATM 38 C C6 . C38 A 1 2 ? 1.149 11.673 12.624 1.00 34.73 ? 2 C38 A C6 1 HETATM 39 I I . C38 A 1 2 ? 2.216 8.798 12.882 1.00 52.11 ? 2 C38 A I 1 ATOM 40 P P . DG A 1 3 ? -3.363 15.220 10.024 1.00 47.37 ? 3 DG A P 1 ATOM 41 O OP1 . DG A 1 3 ? -4.415 16.265 9.925 1.00 61.28 ? 3 DG A OP1 1 ATOM 42 O OP2 . DG A 1 3 ? -3.691 13.812 9.676 1.00 54.24 ? 3 DG A OP2 1 ATOM 43 O "O5'" . DG A 1 3 ? -2.108 15.679 9.157 1.00 55.47 ? 3 DG A "O5'" 1 ATOM 44 C "C5'" . DG A 1 3 ? -1.220 16.676 9.654 1.00 55.03 ? 3 DG A "C5'" 1 ATOM 45 C "C4'" . DG A 1 3 ? 0.091 16.630 8.907 1.00 44.85 ? 3 DG A "C4'" 1 ATOM 46 O "O4'" . DG A 1 3 ? 0.725 15.349 9.130 1.00 41.76 ? 3 DG A "O4'" 1 ATOM 47 C "C3'" . DG A 1 3 ? -0.024 16.768 7.391 1.00 40.73 ? 3 DG A "C3'" 1 ATOM 48 O "O3'" . DG A 1 3 ? 1.174 17.380 6.900 1.00 43.52 ? 3 DG A "O3'" 1 ATOM 49 C "C2'" . DG A 1 3 ? -0.095 15.322 6.937 1.00 44.28 ? 3 DG A "C2'" 1 ATOM 50 C "C1'" . DG A 1 3 ? 0.900 14.681 7.887 1.00 44.62 ? 3 DG A "C1'" 1 ATOM 51 N N9 . DG A 1 3 ? 0.726 13.257 8.128 1.00 41.28 ? 3 DG A N9 1 ATOM 52 C C8 . DG A 1 3 ? -0.429 12.512 8.029 1.00 38.50 ? 3 DG A C8 1 ATOM 53 N N7 . DG A 1 3 ? -0.263 11.264 8.366 1.00 39.95 ? 3 DG A N7 1 ATOM 54 C C5 . DG A 1 3 ? 1.082 11.177 8.705 1.00 35.85 ? 3 DG A C5 1 ATOM 55 C C6 . DG A 1 3 ? 1.839 10.082 9.173 1.00 32.99 ? 3 DG A C6 1 ATOM 56 O O6 . DG A 1 3 ? 1.460 8.934 9.430 1.00 34.22 ? 3 DG A O6 1 ATOM 57 N N1 . DG A 1 3 ? 3.172 10.430 9.363 1.00 44.42 ? 3 DG A N1 1 ATOM 58 C C2 . DG A 1 3 ? 3.704 11.678 9.152 1.00 28.26 ? 3 DG A C2 1 ATOM 59 N N2 . DG A 1 3 ? 5.023 11.816 9.379 1.00 30.98 ? 3 DG A N2 1 ATOM 60 N N3 . DG A 1 3 ? 2.999 12.713 8.745 1.00 36.35 ? 3 DG A N3 1 ATOM 61 C C4 . DG A 1 3 ? 1.703 12.393 8.540 1.00 39.62 ? 3 DG A C4 1 ATOM 62 P P . DA A 1 4 ? 1.366 17.628 5.321 1.00 45.51 ? 4 DA A P 1 ATOM 63 O OP1 . DA A 1 4 ? 1.712 19.063 5.153 1.00 51.71 ? 4 DA A OP1 1 ATOM 64 O OP2 . DA A 1 4 ? 0.200 17.069 4.596 1.00 44.51 ? 4 DA A OP2 1 ATOM 65 O "O5'" . DA A 1 4 ? 2.660 16.771 4.961 1.00 41.48 ? 4 DA A "O5'" 1 ATOM 66 C "C5'" . DA A 1 4 ? 3.926 17.105 5.522 1.00 40.91 ? 4 DA A "C5'" 1 ATOM 67 C "C4'" . DA A 1 4 ? 4.833 15.896 5.539 1.00 38.44 ? 4 DA A "C4'" 1 ATOM 68 O "O4'" . DA A 1 4 ? 4.274 14.849 6.365 1.00 36.25 ? 4 DA A "O4'" 1 ATOM 69 C "C3'" . DA A 1 4 ? 5.087 15.243 4.184 1.00 32.45 ? 4 DA A "C3'" 1 ATOM 70 O "O3'" . DA A 1 4 ? 6.206 15.864 3.551 1.00 34.60 ? 4 DA A "O3'" 1 ATOM 71 C "C2'" . DA A 1 4 ? 5.429 13.817 4.571 1.00 30.17 ? 4 DA A "C2'" 1 ATOM 72 C "C1'" . DA A 1 4 ? 4.509 13.575 5.764 1.00 35.39 ? 4 DA A "C1'" 1 ATOM 73 N N9 . DA A 1 4 ? 3.211 13.018 5.390 1.00 32.38 ? 4 DA A N9 1 ATOM 74 C C8 . DA A 1 4 ? 2.155 13.681 4.822 1.00 31.98 ? 4 DA A C8 1 ATOM 75 N N7 . DA A 1 4 ? 1.105 12.926 4.620 1.00 37.62 ? 4 DA A N7 1 ATOM 76 C C5 . DA A 1 4 ? 1.498 11.678 5.079 1.00 28.72 ? 4 DA A C5 1 ATOM 77 C C6 . DA A 1 4 ? 0.832 10.444 5.145 1.00 41.30 ? 4 DA A C6 1 ATOM 78 N N6 . DA A 1 4 ? -0.422 10.263 4.736 1.00 41.01 ? 4 DA A N6 1 ATOM 79 N N1 . DA A 1 4 ? 1.508 9.391 5.652 1.00 38.95 ? 4 DA A N1 1 ATOM 80 C C2 . DA A 1 4 ? 2.769 9.583 6.066 1.00 34.60 ? 4 DA A C2 1 ATOM 81 N N3 . DA A 1 4 ? 3.499 10.696 6.060 1.00 30.92 ? 4 DA A N3 1 ATOM 82 C C4 . DA A 1 4 ? 2.796 11.719 5.549 1.00 29.14 ? 4 DA A C4 1 ATOM 83 P P . DG A 1 5 ? 6.059 16.435 2.059 1.00 39.37 ? 5 DG A P 1 ATOM 84 O OP1 . DG A 1 5 ? 7.253 17.273 1.771 1.00 41.09 ? 5 DG A OP1 1 ATOM 85 O OP2 . DG A 1 5 ? 4.701 17.020 1.923 1.00 37.12 ? 5 DG A OP2 1 ATOM 86 O "O5'" . DG A 1 5 ? 6.111 15.134 1.145 1.00 41.98 ? 5 DG A "O5'" 1 ATOM 87 C "C5'" . DG A 1 5 ? 6.099 15.242 -0.278 1.00 41.96 ? 5 DG A "C5'" 1 ATOM 88 C "C4'" . DG A 1 5 ? 6.525 13.935 -0.901 1.00 34.99 ? 5 DG A "C4'" 1 ATOM 89 O "O4'" . DG A 1 5 ? 5.579 12.885 -0.582 1.00 31.84 ? 5 DG A "O4'" 1 ATOM 90 C "C3'" . DG A 1 5 ? 6.639 13.937 -2.429 1.00 30.13 ? 5 DG A "C3'" 1 ATOM 91 O "O3'" . DG A 1 5 ? 7.787 13.168 -2.779 1.00 38.87 ? 5 DG A "O3'" 1 ATOM 92 C "C2'" . DG A 1 5 ? 5.414 13.157 -2.864 1.00 37.46 ? 5 DG A "C2'" 1 ATOM 93 C "C1'" . DG A 1 5 ? 5.382 12.133 -1.760 1.00 30.99 ? 5 DG A "C1'" 1 ATOM 94 N N9 . DG A 1 5 ? 4.144 11.377 -1.623 1.00 38.39 ? 5 DG A N9 1 ATOM 95 C C8 . DG A 1 5 ? 2.862 11.791 -1.893 1.00 25.58 ? 5 DG A C8 1 ATOM 96 N N7 . DG A 1 5 ? 1.972 10.864 -1.668 1.00 35.02 ? 5 DG A N7 1 ATOM 97 C C5 . DG A 1 5 ? 2.713 9.778 -1.222 1.00 27.74 ? 5 DG A C5 1 ATOM 98 C C6 . DG A 1 5 ? 2.296 8.481 -0.817 1.00 26.94 ? 5 DG A C6 1 ATOM 99 O O6 . DG A 1 5 ? 1.153 8.024 -0.775 1.00 28.70 ? 5 DG A O6 1 ATOM 100 N N1 . DG A 1 5 ? 3.377 7.692 -0.436 1.00 26.42 ? 5 DG A N1 1 ATOM 101 C C2 . DG A 1 5 ? 4.694 8.102 -0.439 1.00 29.16 ? 5 DG A C2 1 ATOM 102 N N2 . DG A 1 5 ? 5.606 7.214 -0.027 1.00 28.76 ? 5 DG A N2 1 ATOM 103 N N3 . DG A 1 5 ? 5.089 9.304 -0.817 1.00 30.24 ? 5 DG A N3 1 ATOM 104 C C4 . DG A 1 5 ? 4.053 10.082 -1.191 1.00 24.85 ? 5 DG A C4 1 ATOM 105 P P . DA A 1 6 ? 8.808 13.714 -3.883 1.00 42.20 ? 6 DA A P 1 ATOM 106 O OP1 . DA A 1 6 ? 8.850 15.191 -3.804 1.00 53.27 ? 6 DA A OP1 1 ATOM 107 O OP2 . DA A 1 6 ? 8.448 13.057 -5.161 1.00 51.14 ? 6 DA A OP2 1 ATOM 108 O "O5'" . DA A 1 6 ? 10.199 13.126 -3.399 1.00 46.84 ? 6 DA A "O5'" 1 ATOM 109 C "C5'" . DA A 1 6 ? 10.421 11.729 -3.425 1.00 40.44 ? 6 DA A "C5'" 1 ATOM 110 C "C4'" . DA A 1 6 ? 11.900 11.442 -3.400 1.00 36.99 ? 6 DA A "C4'" 1 ATOM 111 O "O4'" . DA A 1 6 ? 12.054 10.081 -3.851 1.00 32.88 ? 6 DA A "O4'" 1 ATOM 112 C "C3'" . DA A 1 6 ? 12.696 12.255 -4.414 1.00 36.88 ? 6 DA A "C3'" 1 ATOM 113 O "O3'" . DA A 1 6 ? 14.090 12.140 -4.116 1.00 40.52 ? 6 DA A "O3'" 1 ATOM 114 C "C2'" . DA A 1 6 ? 12.381 11.535 -5.709 1.00 30.18 ? 6 DA A "C2'" 1 ATOM 115 C "C1'" . DA A 1 6 ? 12.318 10.077 -5.254 1.00 38.89 ? 6 DA A "C1'" 1 ATOM 116 N N9 . DA A 1 6 ? 11.273 9.286 -5.894 1.00 30.03 ? 6 DA A N9 1 ATOM 117 C C8 . DA A 1 6 ? 10.055 9.683 -6.391 1.00 25.69 ? 6 DA A C8 1 ATOM 118 N N7 . DA A 1 6 ? 9.347 8.701 -6.893 1.00 35.78 ? 6 DA A N7 1 ATOM 119 C C5 . DA A 1 6 ? 10.153 7.585 -6.716 1.00 23.71 ? 6 DA A C5 1 ATOM 120 C C6 . DA A 1 6 ? 9.977 6.231 -7.033 1.00 30.56 ? 6 DA A C6 1 ATOM 121 N N6 . DA A 1 6 ? 8.885 5.737 -7.619 1.00 32.35 ? 6 DA A N6 1 ATOM 122 N N1 . DA A 1 6 ? 10.978 5.384 -6.722 1.00 27.12 ? 6 DA A N1 1 ATOM 123 C C2 . DA A 1 6 ? 12.075 5.871 -6.128 1.00 31.94 ? 6 DA A C2 1 ATOM 124 N N3 . DA A 1 6 ? 12.356 7.119 -5.777 1.00 27.34 ? 6 DA A N3 1 ATOM 125 C C4 . DA A 1 6 ? 11.342 7.935 -6.105 1.00 35.70 ? 6 DA A C4 1 ATOM 126 P P . DG A 1 7 ? 15.168 12.929 -5.010 1.00 39.90 ? 7 DG A P 1 ATOM 127 O OP1 . DG A 1 7 ? 16.359 13.185 -4.157 1.00 43.31 ? 7 DG A OP1 1 ATOM 128 O OP2 . DG A 1 7 ? 14.468 14.067 -5.660 1.00 37.40 ? 7 DG A OP2 1 ATOM 129 O "O5'" . DG A 1 7 ? 15.563 11.868 -6.128 1.00 36.48 ? 7 DG A "O5'" 1 ATOM 130 C "C5'" . DG A 1 7 ? 15.981 10.556 -5.766 1.00 39.93 ? 7 DG A "C5'" 1 ATOM 131 C "C4'" . DG A 1 7 ? 15.973 9.650 -6.975 1.00 42.04 ? 7 DG A "C4'" 1 ATOM 132 O "O4'" . DG A 1 7 ? 14.622 9.342 -7.385 1.00 42.93 ? 7 DG A "O4'" 1 ATOM 133 C "C3'" . DG A 1 7 ? 16.682 10.195 -8.218 1.00 47.88 ? 7 DG A "C3'" 1 ATOM 134 O "O3'" . DG A 1 7 ? 17.519 9.176 -8.768 1.00 51.00 ? 7 DG A "O3'" 1 ATOM 135 C "C2'" . DG A 1 7 ? 15.543 10.502 -9.176 1.00 42.13 ? 7 DG A "C2'" 1 ATOM 136 C "C1'" . DG A 1 7 ? 14.548 9.426 -8.798 1.00 40.00 ? 7 DG A "C1'" 1 ATOM 137 N N9 . DG A 1 7 ? 13.157 9.691 -9.156 1.00 36.13 ? 7 DG A N9 1 ATOM 138 C C8 . DG A 1 7 ? 12.520 10.908 -9.214 1.00 28.26 ? 7 DG A C8 1 ATOM 139 N N7 . DG A 1 7 ? 11.258 10.808 -9.538 1.00 26.73 ? 7 DG A N7 1 ATOM 140 C C5 . DG A 1 7 ? 11.055 9.445 -9.715 1.00 35.25 ? 7 DG A C5 1 ATOM 141 C C6 . DG A 1 7 ? 9.882 8.721 -10.072 1.00 29.54 ? 7 DG A C6 1 ATOM 142 O O6 . DG A 1 7 ? 8.754 9.153 -10.320 1.00 32.55 ? 7 DG A O6 1 ATOM 143 N N1 . DG A 1 7 ? 10.122 7.355 -10.131 1.00 29.34 ? 7 DG A N1 1 ATOM 144 C C2 . DG A 1 7 ? 11.329 6.754 -9.885 1.00 32.34 ? 7 DG A C2 1 ATOM 145 N N2 . DG A 1 7 ? 11.359 5.419 -9.993 1.00 35.44 ? 7 DG A N2 1 ATOM 146 N N3 . DG A 1 7 ? 12.428 7.412 -9.556 1.00 39.42 ? 7 DG A N3 1 ATOM 147 C C4 . DG A 1 7 ? 12.219 8.742 -9.489 1.00 34.58 ? 7 DG A C4 1 ATOM 148 P P . DC A 1 8 ? 18.721 9.576 -9.753 1.00 46.29 ? 8 DC A P 1 ATOM 149 O OP1 . DC A 1 8 ? 19.976 9.382 -9.027 1.00 56.44 ? 8 DC A OP1 1 ATOM 150 O OP2 . DC A 1 8 ? 18.424 10.905 -10.330 1.00 43.48 ? 8 DC A OP2 1 ATOM 151 O "O5'" . DC A 1 8 ? 18.658 8.465 -10.890 1.00 45.72 ? 8 DC A "O5'" 1 ATOM 152 C "C5'" . DC A 1 8 ? 18.798 7.086 -10.561 1.00 37.53 ? 8 DC A "C5'" 1 ATOM 153 C "C4'" . DC A 1 8 ? 17.850 6.249 -11.388 1.00 39.63 ? 8 DC A "C4'" 1 ATOM 154 O "O4'" . DC A 1 8 ? 16.477 6.582 -11.118 1.00 42.08 ? 8 DC A "O4'" 1 ATOM 155 C "C3'" . DC A 1 8 ? 17.968 6.391 -12.900 1.00 45.94 ? 8 DC A "C3'" 1 ATOM 156 O "O3'" . DC A 1 8 ? 19.079 5.668 -13.429 1.00 55.54 ? 8 DC A "O3'" 1 ATOM 157 C "C2'" . DC A 1 8 ? 16.622 5.883 -13.392 1.00 45.34 ? 8 DC A "C2'" 1 ATOM 158 C "C1'" . DC A 1 8 ? 15.695 6.038 -12.179 1.00 43.91 ? 8 DC A "C1'" 1 ATOM 159 N N1 . DC A 1 8 ? 14.555 6.936 -12.420 1.00 36.51 ? 8 DC A N1 1 ATOM 160 C C2 . DC A 1 8 ? 13.316 6.374 -12.716 1.00 38.11 ? 8 DC A C2 1 ATOM 161 O O2 . DC A 1 8 ? 13.219 5.140 -12.757 1.00 40.60 ? 8 DC A O2 1 ATOM 162 N N3 . DC A 1 8 ? 12.258 7.184 -12.949 1.00 34.19 ? 8 DC A N3 1 ATOM 163 C C4 . DC A 1 8 ? 12.408 8.508 -12.893 1.00 36.51 ? 8 DC A C4 1 ATOM 164 N N4 . DC A 1 8 ? 11.339 9.268 -13.134 1.00 34.78 ? 8 DC A N4 1 ATOM 165 C C5 . DC A 1 8 ? 13.663 9.111 -12.587 1.00 37.34 ? 8 DC A C5 1 ATOM 166 C C6 . DC A 1 8 ? 14.701 8.294 -12.360 1.00 33.11 ? 8 DC A C6 1 ATOM 167 O "O5'" . DG B 1 1 ? 2.803 4.128 -16.239 1.00 49.43 ? 9 DG B "O5'" 1 ATOM 168 C "C5'" . DG B 1 1 ? 3.702 3.194 -16.829 1.00 36.40 ? 9 DG B "C5'" 1 ATOM 169 C "C4'" . DG B 1 1 ? 4.351 2.296 -15.803 1.00 38.10 ? 9 DG B "C4'" 1 ATOM 170 O "O4'" . DG B 1 1 ? 5.627 2.826 -15.377 1.00 34.65 ? 9 DG B "O4'" 1 ATOM 171 C "C3'" . DG B 1 1 ? 3.549 2.056 -14.527 1.00 32.22 ? 9 DG B "C3'" 1 ATOM 172 O "O3'" . DG B 1 1 ? 3.785 0.720 -14.071 1.00 36.15 ? 9 DG B "O3'" 1 ATOM 173 C "C2'" . DG B 1 1 ? 4.114 3.088 -13.565 1.00 32.15 ? 9 DG B "C2'" 1 ATOM 174 C "C1'" . DG B 1 1 ? 5.566 3.244 -14.018 1.00 37.95 ? 9 DG B "C1'" 1 ATOM 175 N N9 . DG B 1 1 ? 6.080 4.611 -13.961 1.00 33.00 ? 9 DG B N9 1 ATOM 176 C C8 . DG B 1 1 ? 5.378 5.771 -14.169 1.00 39.23 ? 9 DG B C8 1 ATOM 177 N N7 . DG B 1 1 ? 6.123 6.842 -14.093 1.00 37.65 ? 9 DG B N7 1 ATOM 178 C C5 . DG B 1 1 ? 7.388 6.359 -13.803 1.00 36.09 ? 9 DG B C5 1 ATOM 179 C C6 . DG B 1 1 ? 8.611 7.050 -13.603 1.00 32.56 ? 9 DG B C6 1 ATOM 180 O O6 . DG B 1 1 ? 8.821 8.259 -13.645 1.00 32.92 ? 9 DG B O6 1 ATOM 181 N N1 . DG B 1 1 ? 9.656 6.176 -13.333 1.00 34.76 ? 9 DG B N1 1 ATOM 182 C C2 . DG B 1 1 ? 9.539 4.806 -13.265 1.00 35.81 ? 9 DG B C2 1 ATOM 183 N N2 . DG B 1 1 ? 10.668 4.121 -13.001 1.00 35.58 ? 9 DG B N2 1 ATOM 184 N N3 . DG B 1 1 ? 8.402 4.151 -13.446 1.00 32.75 ? 9 DG B N3 1 ATOM 185 C C4 . DG B 1 1 ? 7.379 4.983 -13.710 1.00 26.31 ? 9 DG B C4 1 HETATM 186 P P . C38 B 1 2 ? 3.084 0.189 -12.723 1.00 41.87 ? 10 C38 B P 1 HETATM 187 O O1P . C38 B 1 2 ? 2.012 1.144 -12.339 1.00 37.75 ? 10 C38 B O1P 1 HETATM 188 O O2P . C38 B 1 2 ? 2.756 -1.248 -12.918 1.00 40.62 ? 10 C38 B O2P 1 HETATM 189 O "O5'" . C38 B 1 2 ? 4.261 0.280 -11.659 1.00 43.03 ? 10 C38 B "O5'" 1 HETATM 190 C "C5'" . C38 B 1 2 ? 5.500 -0.370 -11.911 1.00 32.25 ? 10 C38 B "C5'" 1 HETATM 191 C "C4'" . C38 B 1 2 ? 6.534 0.078 -10.909 1.00 33.42 ? 10 C38 B "C4'" 1 HETATM 192 O "O4'" . C38 B 1 2 ? 6.878 1.465 -11.136 1.00 37.82 ? 10 C38 B "O4'" 1 HETATM 193 C "C3'" . C38 B 1 2 ? 6.116 -0.019 -9.439 1.00 36.99 ? 10 C38 B "C3'" 1 HETATM 194 O "O3'" . C38 B 1 2 ? 7.208 -0.574 -8.699 1.00 41.28 ? 10 C38 B "O3'" 1 HETATM 195 C "C2'" . C38 B 1 2 ? 5.876 1.430 -9.044 1.00 33.63 ? 10 C38 B "C2'" 1 HETATM 196 C "C1'" . C38 B 1 2 ? 6.926 2.123 -9.885 1.00 40.99 ? 10 C38 B "C1'" 1 HETATM 197 N N1 . C38 B 1 2 ? 6.739 3.559 -10.128 1.00 33.05 ? 10 C38 B N1 1 HETATM 198 C C2 . C38 B 1 2 ? 7.873 4.374 -10.200 1.00 34.28 ? 10 C38 B C2 1 HETATM 199 O O2 . C38 B 1 2 ? 8.984 3.855 -10.045 1.00 31.43 ? 10 C38 B O2 1 HETATM 200 N N3 . C38 B 1 2 ? 7.728 5.699 -10.438 1.00 33.25 ? 10 C38 B N3 1 HETATM 201 C C4 . C38 B 1 2 ? 6.511 6.211 -10.601 1.00 30.35 ? 10 C38 B C4 1 HETATM 202 N N4 . C38 B 1 2 ? 6.412 7.525 -10.797 1.00 27.42 ? 10 C38 B N4 1 HETATM 203 C C5 . C38 B 1 2 ? 5.342 5.396 -10.552 1.00 33.40 ? 10 C38 B C5 1 HETATM 204 C C6 . C38 B 1 2 ? 5.497 4.093 -10.296 1.00 32.39 ? 10 C38 B C6 1 HETATM 205 I I . C38 B 1 2 ? 3.414 6.188 -11.087 1.00 39.38 ? 10 C38 B I 1 ATOM 206 P P . DG B 1 3 ? 7.017 -0.959 -7.154 1.00 42.58 ? 11 DG B P 1 ATOM 207 O OP1 . DG B 1 3 ? 8.045 -1.967 -6.812 1.00 49.41 ? 11 DG B OP1 1 ATOM 208 O OP2 . DG B 1 3 ? 5.586 -1.257 -6.923 1.00 38.23 ? 11 DG B OP2 1 ATOM 209 O "O5'" . DG B 1 3 ? 7.379 0.382 -6.380 1.00 44.17 ? 11 DG B "O5'" 1 ATOM 210 C "C5'" . DG B 1 3 ? 8.649 0.999 -6.565 1.00 37.02 ? 11 DG B "C5'" 1 ATOM 211 C "C4'" . DG B 1 3 ? 8.645 2.390 -5.979 1.00 34.15 ? 11 DG B "C4'" 1 ATOM 212 O "O4'" . DG B 1 3 ? 7.653 3.213 -6.643 1.00 41.34 ? 11 DG B "O4'" 1 ATOM 213 C "C3'" . DG B 1 3 ? 8.319 2.470 -4.485 1.00 29.18 ? 11 DG B "C3'" 1 ATOM 214 O "O3'" . DG B 1 3 ? 9.130 3.490 -3.915 1.00 33.80 ? 11 DG B "O3'" 1 ATOM 215 C "C2'" . DG B 1 3 ? 6.881 2.947 -4.479 1.00 29.26 ? 11 DG B "C2'" 1 ATOM 216 C "C1'" . DG B 1 3 ? 6.936 3.907 -5.644 1.00 35.07 ? 11 DG B "C1'" 1 ATOM 217 N N9 . DG B 1 3 ? 5.644 4.300 -6.184 1.00 30.89 ? 11 DG B N9 1 ATOM 218 C C8 . DG B 1 3 ? 4.505 3.537 -6.264 1.00 31.63 ? 11 DG B C8 1 ATOM 219 N N7 . DG B 1 3 ? 3.480 4.195 -6.727 1.00 30.40 ? 11 DG B N7 1 ATOM 220 C C5 . DG B 1 3 ? 3.977 5.463 -6.982 1.00 33.17 ? 11 DG B C5 1 ATOM 221 C C6 . DG B 1 3 ? 3.327 6.610 -7.475 1.00 28.43 ? 11 DG B C6 1 ATOM 222 O O6 . DG B 1 3 ? 2.141 6.750 -7.763 1.00 31.16 ? 11 DG B O6 1 ATOM 223 N N1 . DG B 1 3 ? 4.203 7.678 -7.608 1.00 26.05 ? 11 DG B N1 1 ATOM 224 C C2 . DG B 1 3 ? 5.540 7.651 -7.283 1.00 28.81 ? 11 DG B C2 1 ATOM 225 N N2 . DG B 1 3 ? 6.222 8.792 -7.488 1.00 26.27 ? 11 DG B N2 1 ATOM 226 N N3 . DG B 1 3 ? 6.158 6.587 -6.796 1.00 27.00 ? 11 DG B N3 1 ATOM 227 C C4 . DG B 1 3 ? 5.319 5.534 -6.675 1.00 28.98 ? 11 DG B C4 1 ATOM 228 P P . DA B 1 4 ? 9.276 3.603 -2.327 1.00 35.47 ? 12 DA B P 1 ATOM 229 O OP1 . DA B 1 4 ? 10.574 2.991 -1.959 1.00 38.46 ? 12 DA B OP1 1 ATOM 230 O OP2 . DA B 1 4 ? 8.027 3.114 -1.708 1.00 38.48 ? 12 DA B OP2 1 ATOM 231 O "O5'" . DA B 1 4 ? 9.396 5.174 -2.106 1.00 38.17 ? 12 DA B "O5'" 1 ATOM 232 C "C5'" . DA B 1 4 ? 10.309 5.944 -2.897 1.00 33.36 ? 12 DA B "C5'" 1 ATOM 233 C "C4'" . DA B 1 4 ? 9.738 7.313 -3.181 1.00 27.53 ? 12 DA B "C4'" 1 ATOM 234 O "O4'" . DA B 1 4 ? 8.679 7.274 -4.162 1.00 27.48 ? 12 DA B "O4'" 1 ATOM 235 C "C3'" . DA B 1 4 ? 9.104 7.951 -1.959 1.00 34.47 ? 12 DA B "C3'" 1 ATOM 236 O "O3'" . DA B 1 4 ? 10.119 8.534 -1.147 1.00 33.99 ? 12 DA B "O3'" 1 ATOM 237 C "C2'" . DA B 1 4 ? 8.165 8.967 -2.579 1.00 29.80 ? 12 DA B "C2'" 1 ATOM 238 C "C1'" . DA B 1 4 ? 7.685 8.241 -3.835 1.00 29.84 ? 12 DA B "C1'" 1 ATOM 239 N N9 . DA B 1 4 ? 6.414 7.532 -3.683 1.00 30.12 ? 12 DA B N9 1 ATOM 240 C C8 . DA B 1 4 ? 6.219 6.264 -3.205 1.00 23.38 ? 12 DA B C8 1 ATOM 241 N N7 . DA B 1 4 ? 4.966 5.881 -3.211 1.00 27.98 ? 12 DA B N7 1 ATOM 242 C C5 . DA B 1 4 ? 4.286 6.977 -3.717 1.00 26.73 ? 12 DA B C5 1 ATOM 243 C C6 . DA B 1 4 ? 2.924 7.208 -3.967 1.00 27.29 ? 12 DA B C6 1 ATOM 244 N N6 . DA B 1 4 ? 1.961 6.316 -3.730 1.00 31.02 ? 12 DA B N6 1 ATOM 245 N N1 . DA B 1 4 ? 2.577 8.405 -4.476 1.00 33.38 ? 12 DA B N1 1 ATOM 246 C C2 . DA B 1 4 ? 3.544 9.305 -4.715 1.00 30.96 ? 12 DA B C2 1 ATOM 247 N N3 . DA B 1 4 ? 4.860 9.207 -4.516 1.00 36.49 ? 12 DA B N3 1 ATOM 248 C C4 . DA B 1 4 ? 5.167 8.003 -4.010 1.00 26.42 ? 12 DA B C4 1 ATOM 249 P P . DG B 1 5 ? 9.861 8.715 0.422 1.00 33.97 ? 13 DG B P 1 ATOM 250 O OP1 . DG B 1 5 ? 11.117 9.163 1.071 1.00 37.27 ? 13 DG B OP1 1 ATOM 251 O OP2 . DG B 1 5 ? 9.194 7.484 0.894 1.00 38.20 ? 13 DG B OP2 1 ATOM 252 O "O5'" . DG B 1 5 ? 8.828 9.917 0.459 1.00 42.30 ? 13 DG B "O5'" 1 ATOM 253 C "C5'" . DG B 1 5 ? 7.515 9.739 0.926 1.00 34.71 ? 13 DG B "C5'" 1 ATOM 254 C "C4'" . DG B 1 5 ? 7.228 10.767 1.991 1.00 34.85 ? 13 DG B "C4'" 1 ATOM 255 O "O4'" . DG B 1 5 ? 5.847 10.657 2.379 1.00 31.60 ? 13 DG B "O4'" 1 ATOM 256 C "C3'" . DG B 1 5 ? 8.027 10.552 3.274 1.00 28.06 ? 13 DG B "C3'" 1 ATOM 257 O "O3'" . DG B 1 5 ? 8.156 11.783 3.994 1.00 40.73 ? 13 DG B "O3'" 1 ATOM 258 C "C2'" . DG B 1 5 ? 7.159 9.570 4.037 1.00 36.13 ? 13 DG B "C2'" 1 ATOM 259 C "C1'" . DG B 1 5 ? 5.743 9.967 3.619 1.00 33.37 ? 13 DG B "C1'" 1 ATOM 260 N N9 . DG B 1 5 ? 4.818 8.858 3.429 1.00 31.32 ? 13 DG B N9 1 ATOM 261 C C8 . DG B 1 5 ? 5.029 7.530 3.724 1.00 37.68 ? 13 DG B C8 1 ATOM 262 N N7 . DG B 1 5 ? 3.988 6.783 3.489 1.00 38.40 ? 13 DG B N7 1 ATOM 263 C C5 . DG B 1 5 ? 3.032 7.666 3.001 1.00 39.49 ? 13 DG B C5 1 ATOM 264 C C6 . DG B 1 5 ? 1.691 7.441 2.600 1.00 32.96 ? 13 DG B C6 1 ATOM 265 O O6 . DG B 1 5 ? 1.050 6.389 2.611 1.00 35.56 ? 13 DG B O6 1 ATOM 266 N N1 . DG B 1 5 ? 1.087 8.613 2.161 1.00 34.76 ? 13 DG B N1 1 ATOM 267 C C2 . DG B 1 5 ? 1.690 9.844 2.119 1.00 30.93 ? 13 DG B C2 1 ATOM 268 N N2 . DG B 1 5 ? 0.950 10.851 1.644 1.00 28.46 ? 13 DG B N2 1 ATOM 269 N N3 . DG B 1 5 ? 2.931 10.069 2.509 1.00 35.49 ? 13 DG B N3 1 ATOM 270 C C4 . DG B 1 5 ? 3.540 8.941 2.938 1.00 29.49 ? 13 DG B C4 1 ATOM 271 P P . DA B 1 6 ? 9.297 11.938 5.119 1.00 40.54 ? 14 DA B P 1 ATOM 272 O OP1 . DA B 1 6 ? 10.448 11.061 4.800 1.00 49.51 ? 14 DA B OP1 1 ATOM 273 O OP2 . DA B 1 6 ? 8.616 11.800 6.430 1.00 44.19 ? 14 DA B OP2 1 ATOM 274 O "O5'" . DA B 1 6 ? 9.762 13.449 4.963 1.00 39.69 ? 14 DA B "O5'" 1 ATOM 275 C "C5'" . DA B 1 6 ? 8.847 14.502 5.207 1.00 38.24 ? 14 DA B "C5'" 1 ATOM 276 C "C4'" . DA B 1 6 ? 9.565 15.830 5.233 1.00 31.33 ? 14 DA B "C4'" 1 ATOM 277 O "O4'" . DA B 1 6 ? 8.664 16.746 5.884 1.00 33.38 ? 14 DA B "O4'" 1 ATOM 278 C "C3'" . DA B 1 6 ? 10.800 15.868 6.124 1.00 33.86 ? 14 DA B "C3'" 1 ATOM 279 O "O3'" . DA B 1 6 ? 11.529 17.077 5.865 1.00 37.55 ? 14 DA B "O3'" 1 ATOM 280 C "C2'" . DA B 1 6 ? 10.185 15.900 7.511 1.00 32.12 ? 14 DA B "C2'" 1 ATOM 281 C "C1'" . DA B 1 6 ? 8.884 16.678 7.296 1.00 32.80 ? 14 DA B "C1'" 1 ATOM 282 N N9 . DA B 1 6 ? 7.704 16.064 7.902 1.00 41.38 ? 14 DA B N9 1 ATOM 283 C C8 . DA B 1 6 ? 7.452 14.730 8.118 1.00 29.81 ? 14 DA B C8 1 ATOM 284 N N7 . DA B 1 6 ? 6.282 14.494 8.661 1.00 30.66 ? 14 DA B N7 1 ATOM 285 C C5 . DA B 1 6 ? 5.729 15.757 8.820 1.00 40.04 ? 14 DA B C5 1 ATOM 286 C C6 . DA B 1 6 ? 4.498 16.190 9.336 1.00 32.27 ? 14 DA B C6 1 ATOM 287 N N6 . DA B 1 6 ? 3.562 15.365 9.811 1.00 40.50 ? 14 DA B N6 1 ATOM 288 N N1 . DA B 1 6 ? 4.256 17.518 9.350 1.00 42.45 ? 14 DA B N1 1 ATOM 289 C C2 . DA B 1 6 ? 5.196 18.347 8.875 1.00 31.26 ? 14 DA B C2 1 ATOM 290 N N3 . DA B 1 6 ? 6.389 18.061 8.362 1.00 38.05 ? 14 DA B N3 1 ATOM 291 C C4 . DA B 1 6 ? 6.597 16.732 8.363 1.00 37.56 ? 14 DA B C4 1 ATOM 292 P P . DG B 1 7 ? 12.839 17.438 6.732 1.00 40.80 ? 15 DG B P 1 ATOM 293 O OP1 . DG B 1 7 ? 13.523 18.566 6.054 1.00 47.24 ? 15 DG B OP1 1 ATOM 294 O OP2 . DG B 1 7 ? 13.586 16.191 7.003 1.00 37.13 ? 15 DG B OP2 1 ATOM 295 O "O5'" . DG B 1 7 ? 12.253 17.984 8.107 1.00 34.30 ? 15 DG B "O5'" 1 ATOM 296 C "C5'" . DG B 1 7 ? 11.430 19.148 8.129 1.00 39.89 ? 15 DG B "C5'" 1 ATOM 297 C "C4'" . DG B 1 7 ? 10.709 19.258 9.453 1.00 43.49 ? 15 DG B "C4'" 1 ATOM 298 O "O4'" . DG B 1 7 ? 9.855 18.115 9.635 1.00 44.19 ? 15 DG B "O4'" 1 ATOM 299 C "C3'" . DG B 1 7 ? 11.609 19.304 10.688 1.00 45.81 ? 15 DG B "C3'" 1 ATOM 300 O "O3'" . DG B 1 7 ? 11.653 20.647 11.176 1.00 43.26 ? 15 DG B "O3'" 1 ATOM 301 C "C2'" . DG B 1 7 ? 10.952 18.362 11.693 1.00 40.05 ? 15 DG B "C2'" 1 ATOM 302 C "C1'" . DG B 1 7 ? 9.662 17.910 11.021 1.00 46.61 ? 15 DG B "C1'" 1 ATOM 303 N N9 . DG B 1 7 ? 9.334 16.498 11.216 1.00 36.47 ? 15 DG B N9 1 ATOM 304 C C8 . DG B 1 7 ? 10.163 15.422 11.024 1.00 30.89 ? 15 DG B C8 1 ATOM 305 N N7 . DG B 1 7 ? 9.576 14.278 11.250 1.00 28.37 ? 15 DG B N7 1 ATOM 306 C C5 . DG B 1 7 ? 8.285 14.622 11.619 1.00 29.99 ? 15 DG B C5 1 ATOM 307 C C6 . DG B 1 7 ? 7.183 13.803 11.984 1.00 36.18 ? 15 DG B C6 1 ATOM 308 O O6 . DG B 1 7 ? 7.127 12.564 12.046 1.00 37.85 ? 15 DG B O6 1 ATOM 309 N N1 . DG B 1 7 ? 6.062 14.566 12.297 1.00 28.34 ? 15 DG B N1 1 ATOM 310 C C2 . DG B 1 7 ? 6.006 15.935 12.261 1.00 33.39 ? 15 DG B C2 1 ATOM 311 N N2 . DG B 1 7 ? 4.834 16.486 12.605 1.00 38.03 ? 15 DG B N2 1 ATOM 312 N N3 . DG B 1 7 ? 7.022 16.707 11.916 1.00 39.07 ? 15 DG B N3 1 ATOM 313 C C4 . DG B 1 7 ? 8.121 15.990 11.612 1.00 34.00 ? 15 DG B C4 1 ATOM 314 P P . DC B 1 8 ? 12.423 20.980 12.544 1.00 42.57 ? 16 DC B P 1 ATOM 315 O OP1 . DC B 1 8 ? 12.834 22.403 12.496 1.00 45.06 ? 16 DC B OP1 1 ATOM 316 O OP2 . DC B 1 8 ? 13.452 19.932 12.755 1.00 37.17 ? 16 DC B OP2 1 ATOM 317 O "O5'" . DC B 1 8 ? 11.291 20.831 13.656 1.00 39.93 ? 16 DC B "O5'" 1 ATOM 318 C "C5'" . DC B 1 8 ? 10.171 21.715 13.669 1.00 40.31 ? 16 DC B "C5'" 1 ATOM 319 C "C4'" . DC B 1 8 ? 9.105 21.204 14.609 1.00 40.20 ? 16 DC B "C4'" 1 ATOM 320 O "O4'" . DC B 1 8 ? 8.565 19.953 14.146 1.00 42.96 ? 16 DC B "O4'" 1 ATOM 321 C "C3'" . DC B 1 8 ? 9.573 20.901 16.025 1.00 40.62 ? 16 DC B "C3'" 1 ATOM 322 O "O3'" . DC B 1 8 ? 9.816 22.072 16.800 1.00 41.68 ? 16 DC B "O3'" 1 ATOM 323 C "C2'" . DC B 1 8 ? 8.486 19.970 16.533 1.00 34.36 ? 16 DC B "C2'" 1 ATOM 324 C "C1'" . DC B 1 8 ? 7.948 19.307 15.256 1.00 40.16 ? 16 DC B "C1'" 1 ATOM 325 N N1 . DC B 1 8 ? 8.229 17.868 15.161 1.00 34.23 ? 16 DC B N1 1 ATOM 326 C C2 . DC B 1 8 ? 7.184 16.971 15.369 1.00 31.40 ? 16 DC B C2 1 ATOM 327 O O2 . DC B 1 8 ? 6.056 17.418 15.612 1.00 33.16 ? 16 DC B O2 1 ATOM 328 N N3 . DC B 1 8 ? 7.425 15.645 15.296 1.00 35.60 ? 16 DC B N3 1 ATOM 329 C C4 . DC B 1 8 ? 8.655 15.205 15.024 1.00 30.55 ? 16 DC B C4 1 ATOM 330 N N4 . DC B 1 8 ? 8.847 13.881 14.957 1.00 28.95 ? 16 DC B N4 1 ATOM 331 C C5 . DC B 1 8 ? 9.744 16.099 14.806 1.00 32.45 ? 16 DC B C5 1 ATOM 332 C C6 . DC B 1 8 ? 9.487 17.411 14.882 1.00 36.38 ? 16 DC B C6 1 HETATM 333 K K . K C 2 . ? 0.000 5.739 0.000 0.50 29.35 ? 104 K A K 1 HETATM 334 O O . HOH D 3 . ? 14.102 2.657 -13.061 1.00 43.71 ? 17 HOH A O 1 HETATM 335 O O . HOH D 3 . ? -0.910 7.866 9.724 1.00 35.37 ? 20 HOH A O 1 HETATM 336 O O . HOH D 3 . ? 5.724 7.304 12.778 1.00 48.42 ? 21 HOH A O 1 HETATM 337 O O . HOH D 3 . ? 3.918 12.799 1.642 1.00 35.10 ? 22 HOH A O 1 HETATM 338 O O . HOH D 3 . ? 2.931 5.139 0.447 1.00 34.81 ? 25 HOH A O 1 HETATM 339 O O . HOH D 3 . ? 0.983 7.202 16.518 1.00 45.35 ? 26 HOH A O 1 HETATM 340 O O . HOH D 3 . ? 11.664 3.056 -7.411 1.00 36.19 ? 30 HOH A O 1 HETATM 341 O O . HOH D 3 . ? -3.159 12.237 6.462 1.00 43.67 ? 31 HOH A O 1 HETATM 342 O O . HOH D 3 . ? 2.762 16.026 -1.601 1.00 40.84 ? 32 HOH A O 1 HETATM 343 O O . HOH D 3 . ? 5.459 8.398 9.898 1.00 42.64 ? 33 HOH A O 1 HETATM 344 O O . HOH D 3 . ? -3.061 10.138 8.572 1.00 49.96 ? 36 HOH A O 1 HETATM 345 O O . HOH D 3 . ? 2.871 7.458 7.976 1.00 60.48 ? 39 HOH A O 1 HETATM 346 O O . HOH D 3 . ? -1.869 9.960 12.381 1.00 47.00 ? 41 HOH A O 1 HETATM 347 O O . HOH D 3 . ? 5.499 8.532 15.825 1.00 41.76 ? 42 HOH A O 1 HETATM 348 O O . HOH D 3 . ? 14.874 5.009 -9.081 1.00 40.01 ? 43 HOH A O 1 HETATM 349 O O . HOH D 3 . ? 7.845 11.265 -9.288 1.00 39.61 ? 46 HOH A O 1 HETATM 350 O O . HOH D 3 . ? 14.364 8.363 -3.340 1.00 55.24 ? 47 HOH A O 1 HETATM 351 O O . HOH D 3 . ? 3.777 19.920 2.988 1.00 53.83 ? 49 HOH A O 1 HETATM 352 O O . HOH D 3 . ? -0.878 7.372 13.090 1.00 68.39 ? 51 HOH A O 1 HETATM 353 O O . HOH D 3 . ? -7.513 17.142 8.004 1.00 53.82 ? 52 HOH A O 1 HETATM 354 O O . HOH D 3 . ? 5.031 9.095 18.799 1.00 50.49 ? 53 HOH A O 1 HETATM 355 O O . HOH D 3 . ? -5.569 8.419 17.268 1.00 52.51 ? 54 HOH A O 1 HETATM 356 O O . HOH D 3 . ? 14.287 13.774 -8.343 1.00 58.79 ? 55 HOH A O 1 HETATM 357 O O . HOH D 3 . ? 2.715 7.870 19.990 1.00 53.19 ? 56 HOH A O 1 HETATM 358 O O . HOH D 3 . ? -4.121 14.486 18.561 1.00 65.42 ? 58 HOH A O 1 HETATM 359 O O . HOH D 3 . ? -6.219 9.641 20.012 1.00 61.59 ? 59 HOH A O 1 HETATM 360 O O . HOH D 3 . ? 1.859 15.091 1.572 1.00 51.37 ? 62 HOH A O 1 HETATM 361 O O . HOH D 3 . ? -7.696 14.461 10.146 1.00 49.81 ? 63 HOH A O 1 HETATM 362 O O . HOH D 3 . ? 5.784 21.295 5.025 1.00 62.17 ? 66 HOH A O 1 HETATM 363 O O . HOH D 3 . ? 8.907 10.833 16.656 1.00 58.08 ? 67 HOH A O 1 HETATM 364 O O . HOH D 3 . ? 6.968 8.272 21.210 1.00 51.58 ? 68 HOH A O 1 HETATM 365 O O . HOH D 3 . ? 2.962 23.994 4.131 1.00 45.50 ? 69 HOH A O 1 HETATM 366 O O . HOH D 3 . ? 13.941 5.834 -2.051 1.00 52.65 ? 70 HOH A O 1 HETATM 367 O O . HOH D 3 . ? -2.802 8.435 20.492 1.00 57.15 ? 71 HOH A O 1 HETATM 368 O O . HOH D 3 . ? 9.438 9.960 19.471 1.00 58.96 ? 72 HOH A O 1 HETATM 369 O O . HOH D 3 . ? 4.052 5.178 17.294 1.00 49.94 ? 74 HOH A O 1 HETATM 370 O O . HOH D 3 . ? 5.983 10.364 7.034 1.00 43.91 ? 76 HOH A O 1 HETATM 371 O O . HOH D 3 . ? 9.618 16.439 1.352 1.00 50.98 ? 78 HOH A O 1 HETATM 372 O O . HOH D 3 . ? 11.710 11.848 18.127 1.00 52.70 ? 79 HOH A O 1 HETATM 373 O O . HOH D 3 . ? 12.702 11.264 20.744 1.00 36.29 ? 80 HOH A O 1 HETATM 374 O O . HOH D 3 . ? -6.763 16.016 19.015 1.00 51.08 ? 83 HOH A O 1 HETATM 375 O O . HOH D 3 . ? 4.071 24.814 6.834 1.00 48.80 ? 85 HOH A O 1 HETATM 376 O O . HOH D 3 . ? -10.116 16.779 5.748 1.00 65.65 ? 87 HOH A O 1 HETATM 377 O O . HOH D 3 . ? -8.522 10.963 18.887 1.00 55.84 ? 89 HOH A O 1 HETATM 378 O O . HOH D 3 . ? -2.252 8.608 25.524 1.00 87.06 ? 91 HOH A O 1 HETATM 379 O O . HOH D 3 . ? -4.332 7.322 22.611 1.00 74.82 ? 94 HOH A O 1 HETATM 380 O O . HOH E 3 . ? 2.750 2.305 -10.164 1.00 43.77 ? 18 HOH B O 1 HETATM 381 O O . HOH E 3 . ? 6.443 11.158 -5.963 1.00 33.88 ? 19 HOH B O 1 HETATM 382 O O . HOH E 3 . ? 2.516 18.904 11.213 1.00 52.40 ? 23 HOH B O 1 HETATM 383 O O . HOH E 3 . ? 0.785 -1.139 -9.360 1.00 50.22 ? 24 HOH B O 1 HETATM 384 O O . HOH E 3 . ? 6.859 3.988 0.383 1.00 52.89 ? 27 HOH B O 1 HETATM 385 O O . HOH E 3 . ? 9.706 7.472 9.257 1.00 57.20 ? 28 HOH B O 1 HETATM 386 O O . HOH E 3 . ? 0.000 0.000 2.710 0.50 53.54 ? 29 HOH B O 1 HETATM 387 O O . HOH E 3 . ? 8.030 22.482 18.680 1.00 63.51 ? 34 HOH B O 1 HETATM 388 O O . HOH E 3 . ? 14.811 21.025 8.106 1.00 69.45 ? 35 HOH B O 1 HETATM 389 O O . HOH E 3 . ? 3.852 0.222 -5.448 1.00 48.49 ? 37 HOH B O 1 HETATM 390 O O . HOH E 3 . ? 5.615 22.447 16.983 1.00 61.99 ? 38 HOH B O 1 HETATM 391 O O . HOH E 3 . ? 7.422 19.959 20.028 1.00 43.84 ? 40 HOH B O 1 HETATM 392 O O . HOH E 3 . ? 7.903 18.869 4.351 1.00 45.49 ? 44 HOH B O 1 HETATM 393 O O . HOH E 3 . ? 7.895 6.218 2.783 1.00 60.67 ? 45 HOH B O 1 HETATM 394 O O . HOH E 3 . ? 3.804 3.790 -1.981 1.00 49.72 ? 48 HOH B O 1 HETATM 395 O O . HOH E 3 . ? 2.485 1.418 -0.377 1.00 60.00 ? 50 HOH B O 1 HETATM 396 O O . HOH E 3 . ? 10.744 11.872 8.410 1.00 43.65 ? 57 HOH B O 1 HETATM 397 O O . HOH E 3 . ? 15.880 17.045 11.512 1.00 72.36 ? 60 HOH B O 1 HETATM 398 O O . HOH E 3 . ? 12.033 19.257 3.730 1.00 59.42 ? 61 HOH B O 1 HETATM 399 O O . HOH E 3 . ? 10.507 -1.634 -8.965 1.00 57.89 ? 64 HOH B O 1 HETATM 400 O O . HOH E 3 . ? 5.701 20.080 22.325 1.00 48.24 ? 65 HOH B O 1 HETATM 401 O O . HOH E 3 . ? 4.769 22.303 8.787 1.00 55.06 ? 73 HOH B O 1 HETATM 402 O O . HOH E 3 . ? 11.790 4.367 0.085 1.00 73.27 ? 75 HOH B O 1 HETATM 403 O O . HOH E 3 . ? 12.539 10.405 3.409 1.00 71.43 ? 77 HOH B O 1 HETATM 404 O O . HOH E 3 . ? 14.062 22.542 4.389 1.00 50.10 ? 81 HOH B O 1 HETATM 405 O O . HOH E 3 . ? 16.062 9.490 4.144 1.00 59.62 ? 82 HOH B O 1 HETATM 406 O O . HOH E 3 . ? 3.242 23.534 10.947 1.00 66.45 ? 84 HOH B O 1 HETATM 407 O O . HOH E 3 . ? 8.505 3.046 4.060 1.00 63.40 ? 86 HOH B O 1 HETATM 408 O O . HOH E 3 . ? 3.255 5.357 5.478 1.00 61.92 ? 88 HOH B O 1 HETATM 409 O O . HOH E 3 . ? 7.408 21.437 9.650 1.00 59.01 ? 90 HOH B O 1 HETATM 410 O O . HOH E 3 . ? 15.717 6.732 5.155 1.00 57.82 ? 92 HOH B O 1 HETATM 411 O O . HOH E 3 . ? 8.250 0.994 2.294 1.00 55.15 ? 93 HOH B O 1 HETATM 412 O O . HOH E 3 . ? 11.029 8.698 5.636 1.00 58.40 ? 95 HOH B O 1 HETATM 413 O O . HOH E 3 . ? 6.513 -0.779 1.151 1.00 50.98 ? 96 HOH B O 1 HETATM 414 O O . HOH E 3 . ? 0.364 3.541 -2.249 1.00 88.19 ? 97 HOH B O 1 HETATM 415 O O . HOH E 3 . ? 0.481 3.894 -5.504 1.00 90.54 ? 98 HOH B O 1 HETATM 416 O O . HOH E 3 . ? 12.791 9.104 7.399 1.00 51.21 ? 99 HOH B O 1 HETATM 417 O O . HOH E 3 . ? 4.521 4.331 2.811 1.00 77.63 ? 100 HOH B O 1 HETATM 418 O O . HOH E 3 . ? 0.469 3.642 -14.699 1.00 80.68 ? 101 HOH B O 1 HETATM 419 O O . HOH E 3 . ? 2.331 2.290 2.577 1.00 70.74 ? 102 HOH B O 1 HETATM 420 O O . HOH E 3 . ? 6.806 23.165 12.306 1.00 70.66 ? 103 HOH B O 1 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G A . n A 1 2 C38 2 2 2 C38 CID A . n A 1 3 DG 3 3 3 DG G A . n A 1 4 DA 4 4 4 DA A A . n A 1 5 DG 5 5 5 DG G A . n A 1 6 DA 6 6 6 DA A A . n A 1 7 DG 7 7 7 DG G A . n A 1 8 DC 8 8 8 DC C A . n B 1 1 DG 1 9 9 DG G B . n B 1 2 C38 2 10 10 C38 CID B . n B 1 3 DG 3 11 11 DG G B . n B 1 4 DA 4 12 12 DA A B . n B 1 5 DG 5 13 13 DG G B . n B 1 6 DA 6 14 14 DA A B . n B 1 7 DG 7 15 15 DG G B . n B 1 8 DC 8 16 16 DC C B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K 1 104 104 K K A . D 3 HOH 1 17 17 HOH HOH A . D 3 HOH 2 20 20 HOH HOH A . D 3 HOH 3 21 21 HOH HOH A . D 3 HOH 4 22 22 HOH HOH A . D 3 HOH 5 25 25 HOH HOH A . D 3 HOH 6 26 26 HOH HOH A . D 3 HOH 7 30 30 HOH HOH A . D 3 HOH 8 31 31 HOH HOH A . D 3 HOH 9 32 32 HOH HOH A . D 3 HOH 10 33 33 HOH HOH A . D 3 HOH 11 36 36 HOH HOH A . D 3 HOH 12 39 39 HOH HOH A . D 3 HOH 13 41 41 HOH HOH A . D 3 HOH 14 42 42 HOH HOH A . D 3 HOH 15 43 43 HOH HOH A . D 3 HOH 16 46 46 HOH HOH A . D 3 HOH 17 47 47 HOH HOH A . D 3 HOH 18 49 49 HOH HOH A . D 3 HOH 19 51 51 HOH HOH A . D 3 HOH 20 52 52 HOH HOH A . D 3 HOH 21 53 53 HOH HOH A . D 3 HOH 22 54 54 HOH HOH A . D 3 HOH 23 55 55 HOH HOH A . D 3 HOH 24 56 56 HOH HOH A . D 3 HOH 25 58 58 HOH HOH A . D 3 HOH 26 59 59 HOH HOH A . D 3 HOH 27 62 62 HOH HOH A . D 3 HOH 28 63 63 HOH HOH A . D 3 HOH 29 66 66 HOH HOH A . D 3 HOH 30 67 67 HOH HOH A . D 3 HOH 31 68 68 HOH HOH A . D 3 HOH 32 69 69 HOH HOH A . D 3 HOH 33 70 70 HOH HOH A . D 3 HOH 34 71 71 HOH HOH A . D 3 HOH 35 72 72 HOH HOH A . D 3 HOH 36 74 74 HOH HOH A . D 3 HOH 37 76 76 HOH HOH A . D 3 HOH 38 78 78 HOH HOH A . D 3 HOH 39 79 79 HOH HOH A . D 3 HOH 40 80 80 HOH HOH A . D 3 HOH 41 83 83 HOH HOH A . D 3 HOH 42 85 85 HOH HOH A . D 3 HOH 43 87 87 HOH HOH A . D 3 HOH 44 89 89 HOH HOH A . D 3 HOH 45 91 91 HOH HOH A . D 3 HOH 46 94 94 HOH HOH A . E 3 HOH 1 18 18 HOH HOH B . E 3 HOH 2 19 19 HOH HOH B . E 3 HOH 3 23 23 HOH HOH B . E 3 HOH 4 24 24 HOH HOH B . E 3 HOH 5 27 27 HOH HOH B . E 3 HOH 6 28 28 HOH HOH B . E 3 HOH 7 29 29 HOH HOH B . E 3 HOH 8 34 34 HOH HOH B . E 3 HOH 9 35 35 HOH HOH B . E 3 HOH 10 37 37 HOH HOH B . E 3 HOH 11 38 38 HOH HOH B . E 3 HOH 12 40 40 HOH HOH B . E 3 HOH 13 44 44 HOH HOH B . E 3 HOH 14 45 45 HOH HOH B . E 3 HOH 15 48 48 HOH HOH B . E 3 HOH 16 50 50 HOH HOH B . E 3 HOH 17 57 57 HOH HOH B . E 3 HOH 18 60 60 HOH HOH B . E 3 HOH 19 61 61 HOH HOH B . E 3 HOH 20 64 64 HOH HOH B . E 3 HOH 21 65 65 HOH HOH B . E 3 HOH 22 73 73 HOH HOH B . E 3 HOH 23 75 75 HOH HOH B . E 3 HOH 24 77 77 HOH HOH B . E 3 HOH 25 81 81 HOH HOH B . E 3 HOH 26 82 82 HOH HOH B . E 3 HOH 27 84 84 HOH HOH B . E 3 HOH 28 86 86 HOH HOH B . E 3 HOH 29 88 88 HOH HOH B . E 3 HOH 30 90 90 HOH HOH B . E 3 HOH 31 92 92 HOH HOH B . E 3 HOH 32 93 93 HOH HOH B . E 3 HOH 33 95 95 HOH HOH B . E 3 HOH 34 96 96 HOH HOH B . E 3 HOH 35 97 97 HOH HOH B . E 3 HOH 36 98 98 HOH HOH B . E 3 HOH 37 99 99 HOH HOH B . E 3 HOH 38 100 100 HOH HOH B . E 3 HOH 39 101 101 HOH HOH B . E 3 HOH 40 102 102 HOH HOH B . E 3 HOH 41 103 103 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A C38 2 A C38 2 ? DC ? 2 B C38 2 B C38 10 ? DC ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A K 104 ? C K . 2 1 B HOH 29 ? E HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 104 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 3_555 62.6 ? 2 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 104 ? 1_555 O ? D HOH . ? A HOH 25 ? 1_555 78.1 ? 3 O6 ? A DG 5 ? A DG 5 ? 3_555 K ? C K . ? A K 104 ? 1_555 O ? D HOH . ? A HOH 25 ? 1_555 123.0 ? 4 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 104 ? 1_555 O ? D HOH . ? A HOH 25 ? 3_555 123.0 ? 5 O6 ? A DG 5 ? A DG 5 ? 3_555 K ? C K . ? A K 104 ? 1_555 O ? D HOH . ? A HOH 25 ? 3_555 78.1 ? 6 O ? D HOH . ? A HOH 25 ? 1_555 K ? C K . ? A K 104 ? 1_555 O ? D HOH . ? A HOH 25 ? 3_555 157.1 ? 7 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 104 ? 1_555 O6 ? B DG 5 ? B DG 13 ? 1_555 85.0 ? 8 O6 ? A DG 5 ? A DG 5 ? 3_555 K ? C K . ? A K 104 ? 1_555 O6 ? B DG 5 ? B DG 13 ? 1_555 72.7 ? 9 O ? D HOH . ? A HOH 25 ? 1_555 K ? C K . ? A K 104 ? 1_555 O6 ? B DG 5 ? B DG 13 ? 1_555 63.8 ? 10 O ? D HOH . ? A HOH 25 ? 3_555 K ? C K . ? A K 104 ? 1_555 O6 ? B DG 5 ? B DG 13 ? 1_555 122.0 ? 11 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 104 ? 1_555 O6 ? B DG 5 ? B DG 13 ? 3_555 72.7 ? 12 O6 ? A DG 5 ? A DG 5 ? 3_555 K ? C K . ? A K 104 ? 1_555 O6 ? B DG 5 ? B DG 13 ? 3_555 85.0 ? 13 O ? D HOH . ? A HOH 25 ? 1_555 K ? C K . ? A K 104 ? 1_555 O6 ? B DG 5 ? B DG 13 ? 3_555 122.0 ? 14 O ? D HOH . ? A HOH 25 ? 3_555 K ? C K . ? A K 104 ? 1_555 O6 ? B DG 5 ? B DG 13 ? 3_555 63.8 ? 15 O6 ? B DG 5 ? B DG 13 ? 1_555 K ? C K . ? A K 104 ? 1_555 O6 ? B DG 5 ? B DG 13 ? 3_555 154.0 ? 16 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 104 ? 1_555 O ? E HOH . ? B HOH 97 ? 1_555 109.7 ? 17 O6 ? A DG 5 ? A DG 5 ? 3_555 K ? C K . ? A K 104 ? 1_555 O ? E HOH . ? B HOH 97 ? 1_555 148.1 ? 18 O ? D HOH . ? A HOH 25 ? 1_555 K ? C K . ? A K 104 ? 1_555 O ? E HOH . ? B HOH 97 ? 1_555 81.7 ? 19 O ? D HOH . ? A HOH 25 ? 3_555 K ? C K . ? A K 104 ? 1_555 O ? E HOH . ? B HOH 97 ? 1_555 82.5 ? 20 O6 ? B DG 5 ? B DG 13 ? 1_555 K ? C K . ? A K 104 ? 1_555 O ? E HOH . ? B HOH 97 ? 1_555 139.2 ? 21 O6 ? B DG 5 ? B DG 13 ? 3_555 K ? C K . ? A K 104 ? 1_555 O ? E HOH . ? B HOH 97 ? 1_555 63.6 ? 22 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 104 ? 1_555 O ? E HOH . ? B HOH 97 ? 3_555 148.1 ? 23 O6 ? A DG 5 ? A DG 5 ? 3_555 K ? C K . ? A K 104 ? 1_555 O ? E HOH . ? B HOH 97 ? 3_555 109.7 ? 24 O ? D HOH . ? A HOH 25 ? 1_555 K ? C K . ? A K 104 ? 1_555 O ? E HOH . ? B HOH 97 ? 3_555 82.5 ? 25 O ? D HOH . ? A HOH 25 ? 3_555 K ? C K . ? A K 104 ? 1_555 O ? E HOH . ? B HOH 97 ? 3_555 81.7 ? 26 O6 ? B DG 5 ? B DG 13 ? 1_555 K ? C K . ? A K 104 ? 1_555 O ? E HOH . ? B HOH 97 ? 3_555 63.6 ? 27 O6 ? B DG 5 ? B DG 13 ? 3_555 K ? C K . ? A K 104 ? 1_555 O ? E HOH . ? B HOH 97 ? 3_555 139.2 ? 28 O ? E HOH . ? B HOH 97 ? 1_555 K ? C K . ? A K 104 ? 1_555 O ? E HOH . ? B HOH 97 ? 3_555 92.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-06-08 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2014-04-16 5 'Structure model' 1 4 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' Other 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_initial_refinement_model 5 5 'Structure model' pdbx_struct_conn_angle 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 19 5 'Structure model' '_pdbx_struct_conn_angle.value' 20 5 'Structure model' '_struct_conn.conn_type_id' 21 5 'Structure model' '_struct_conn.id' 22 5 'Structure model' '_struct_conn.pdbx_dist_value' 23 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 24 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 25 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 31 5 'Structure model' '_struct_conn.ptnr1_symmetry' 32 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 5 'Structure model' '_struct_conn.ptnr2_symmetry' 40 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 41 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 42 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal d*TREK 'data scaling' . ? 1 SCALA 'data scaling' . ? 2 AMoRE phasing . ? 3 CNS refinement 1.0 ? 4 d*TREK 'data reduction' . ? 5 CCP4 'data scaling' '(SCALA)' ? 6 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal C38 O3P O N N 1 C38 P P N N 2 C38 O1P O N N 3 C38 O2P O N N 4 C38 "O5'" O N N 5 C38 "C5'" C N N 6 C38 "C4'" C N R 7 C38 "O4'" O N N 8 C38 "C3'" C N S 9 C38 "O3'" O N N 10 C38 "C2'" C N N 11 C38 "C1'" C N R 12 C38 N1 N N N 13 C38 C2 C N N 14 C38 O2 O N N 15 C38 N3 N N N 16 C38 C4 C N N 17 C38 N4 N N N 18 C38 C5 C N N 19 C38 C6 C N N 20 C38 I I N N 21 C38 H3P H N N 22 C38 H2P H N N 23 C38 "H5'1" H N N 24 C38 "H5'2" H N N 25 C38 "H4'" H N N 26 C38 "H3'" H N N 27 C38 HA H N N 28 C38 "H2'1" H N N 29 C38 "H2'2" H N N 30 C38 "H1'" H N N 31 C38 H4N1 H N N 32 C38 H4N2 H N N 33 C38 H6 H N N 34 DA OP3 O N N 35 DA P P N N 36 DA OP1 O N N 37 DA OP2 O N N 38 DA "O5'" O N N 39 DA "C5'" C N N 40 DA "C4'" C N R 41 DA "O4'" O N N 42 DA "C3'" C N S 43 DA "O3'" O N N 44 DA "C2'" C N N 45 DA "C1'" C N R 46 DA N9 N Y N 47 DA C8 C Y N 48 DA N7 N Y N 49 DA C5 C Y N 50 DA C6 C Y N 51 DA N6 N N N 52 DA N1 N Y N 53 DA C2 C Y N 54 DA N3 N Y N 55 DA C4 C Y N 56 DA HOP3 H N N 57 DA HOP2 H N N 58 DA "H5'" H N N 59 DA "H5''" H N N 60 DA "H4'" H N N 61 DA "H3'" H N N 62 DA "HO3'" H N N 63 DA "H2'" H N N 64 DA "H2''" H N N 65 DA "H1'" H N N 66 DA H8 H N N 67 DA H61 H N N 68 DA H62 H N N 69 DA H2 H N N 70 DC OP3 O N N 71 DC P P N N 72 DC OP1 O N N 73 DC OP2 O N N 74 DC "O5'" O N N 75 DC "C5'" C N N 76 DC "C4'" C N R 77 DC "O4'" O N N 78 DC "C3'" C N S 79 DC "O3'" O N N 80 DC "C2'" C N N 81 DC "C1'" C N R 82 DC N1 N N N 83 DC C2 C N N 84 DC O2 O N N 85 DC N3 N N N 86 DC C4 C N N 87 DC N4 N N N 88 DC C5 C N N 89 DC C6 C N N 90 DC HOP3 H N N 91 DC HOP2 H N N 92 DC "H5'" H N N 93 DC "H5''" H N N 94 DC "H4'" H N N 95 DC "H3'" H N N 96 DC "HO3'" H N N 97 DC "H2'" H N N 98 DC "H2''" H N N 99 DC "H1'" H N N 100 DC H41 H N N 101 DC H42 H N N 102 DC H5 H N N 103 DC H6 H N N 104 DG OP3 O N N 105 DG P P N N 106 DG OP1 O N N 107 DG OP2 O N N 108 DG "O5'" O N N 109 DG "C5'" C N N 110 DG "C4'" C N R 111 DG "O4'" O N N 112 DG "C3'" C N S 113 DG "O3'" O N N 114 DG "C2'" C N N 115 DG "C1'" C N R 116 DG N9 N Y N 117 DG C8 C Y N 118 DG N7 N Y N 119 DG C5 C Y N 120 DG C6 C N N 121 DG O6 O N N 122 DG N1 N N N 123 DG C2 C N N 124 DG N2 N N N 125 DG N3 N N N 126 DG C4 C Y N 127 DG HOP3 H N N 128 DG HOP2 H N N 129 DG "H5'" H N N 130 DG "H5''" H N N 131 DG "H4'" H N N 132 DG "H3'" H N N 133 DG "HO3'" H N N 134 DG "H2'" H N N 135 DG "H2''" H N N 136 DG "H1'" H N N 137 DG H8 H N N 138 DG H1 H N N 139 DG H21 H N N 140 DG H22 H N N 141 HOH O O N N 142 HOH H1 H N N 143 HOH H2 H N N 144 K K K N N 145 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal C38 O3P P sing N N 1 C38 O3P H3P sing N N 2 C38 P O1P doub N N 3 C38 P O2P sing N N 4 C38 P "O5'" sing N N 5 C38 O2P H2P sing N N 6 C38 "O5'" "C5'" sing N N 7 C38 "C5'" "C4'" sing N N 8 C38 "C5'" "H5'1" sing N N 9 C38 "C5'" "H5'2" sing N N 10 C38 "C4'" "O4'" sing N N 11 C38 "C4'" "C3'" sing N N 12 C38 "C4'" "H4'" sing N N 13 C38 "O4'" "C1'" sing N N 14 C38 "C3'" "O3'" sing N N 15 C38 "C3'" "C2'" sing N N 16 C38 "C3'" "H3'" sing N N 17 C38 "O3'" HA sing N N 18 C38 "C2'" "C1'" sing N N 19 C38 "C2'" "H2'1" sing N N 20 C38 "C2'" "H2'2" sing N N 21 C38 "C1'" N1 sing N N 22 C38 "C1'" "H1'" sing N N 23 C38 N1 C2 sing N N 24 C38 N1 C6 sing N N 25 C38 C2 O2 doub N N 26 C38 C2 N3 sing N N 27 C38 N3 C4 doub N N 28 C38 C4 N4 sing N N 29 C38 C4 C5 sing N N 30 C38 N4 H4N1 sing N N 31 C38 N4 H4N2 sing N N 32 C38 C5 C6 doub N N 33 C38 C5 I sing N N 34 C38 C6 H6 sing N N 35 DA OP3 P sing N N 36 DA OP3 HOP3 sing N N 37 DA P OP1 doub N N 38 DA P OP2 sing N N 39 DA P "O5'" sing N N 40 DA OP2 HOP2 sing N N 41 DA "O5'" "C5'" sing N N 42 DA "C5'" "C4'" sing N N 43 DA "C5'" "H5'" sing N N 44 DA "C5'" "H5''" sing N N 45 DA "C4'" "O4'" sing N N 46 DA "C4'" "C3'" sing N N 47 DA "C4'" "H4'" sing N N 48 DA "O4'" "C1'" sing N N 49 DA "C3'" "O3'" sing N N 50 DA "C3'" "C2'" sing N N 51 DA "C3'" "H3'" sing N N 52 DA "O3'" "HO3'" sing N N 53 DA "C2'" "C1'" sing N N 54 DA "C2'" "H2'" sing N N 55 DA "C2'" "H2''" sing N N 56 DA "C1'" N9 sing N N 57 DA "C1'" "H1'" sing N N 58 DA N9 C8 sing Y N 59 DA N9 C4 sing Y N 60 DA C8 N7 doub Y N 61 DA C8 H8 sing N N 62 DA N7 C5 sing Y N 63 DA C5 C6 sing Y N 64 DA C5 C4 doub Y N 65 DA C6 N6 sing N N 66 DA C6 N1 doub Y N 67 DA N6 H61 sing N N 68 DA N6 H62 sing N N 69 DA N1 C2 sing Y N 70 DA C2 N3 doub Y N 71 DA C2 H2 sing N N 72 DA N3 C4 sing Y N 73 DC OP3 P sing N N 74 DC OP3 HOP3 sing N N 75 DC P OP1 doub N N 76 DC P OP2 sing N N 77 DC P "O5'" sing N N 78 DC OP2 HOP2 sing N N 79 DC "O5'" "C5'" sing N N 80 DC "C5'" "C4'" sing N N 81 DC "C5'" "H5'" sing N N 82 DC "C5'" "H5''" sing N N 83 DC "C4'" "O4'" sing N N 84 DC "C4'" "C3'" sing N N 85 DC "C4'" "H4'" sing N N 86 DC "O4'" "C1'" sing N N 87 DC "C3'" "O3'" sing N N 88 DC "C3'" "C2'" sing N N 89 DC "C3'" "H3'" sing N N 90 DC "O3'" "HO3'" sing N N 91 DC "C2'" "C1'" sing N N 92 DC "C2'" "H2'" sing N N 93 DC "C2'" "H2''" sing N N 94 DC "C1'" N1 sing N N 95 DC "C1'" "H1'" sing N N 96 DC N1 C2 sing N N 97 DC N1 C6 sing N N 98 DC C2 O2 doub N N 99 DC C2 N3 sing N N 100 DC N3 C4 doub N N 101 DC C4 N4 sing N N 102 DC C4 C5 sing N N 103 DC N4 H41 sing N N 104 DC N4 H42 sing N N 105 DC C5 C6 doub N N 106 DC C5 H5 sing N N 107 DC C6 H6 sing N N 108 DG OP3 P sing N N 109 DG OP3 HOP3 sing N N 110 DG P OP1 doub N N 111 DG P OP2 sing N N 112 DG P "O5'" sing N N 113 DG OP2 HOP2 sing N N 114 DG "O5'" "C5'" sing N N 115 DG "C5'" "C4'" sing N N 116 DG "C5'" "H5'" sing N N 117 DG "C5'" "H5''" sing N N 118 DG "C4'" "O4'" sing N N 119 DG "C4'" "C3'" sing N N 120 DG "C4'" "H4'" sing N N 121 DG "O4'" "C1'" sing N N 122 DG "C3'" "O3'" sing N N 123 DG "C3'" "C2'" sing N N 124 DG "C3'" "H3'" sing N N 125 DG "O3'" "HO3'" sing N N 126 DG "C2'" "C1'" sing N N 127 DG "C2'" "H2'" sing N N 128 DG "C2'" "H2''" sing N N 129 DG "C1'" N9 sing N N 130 DG "C1'" "H1'" sing N N 131 DG N9 C8 sing Y N 132 DG N9 C4 sing Y N 133 DG C8 N7 doub Y N 134 DG C8 H8 sing N N 135 DG N7 C5 sing Y N 136 DG C5 C6 sing N N 137 DG C5 C4 doub Y N 138 DG C6 O6 doub N N 139 DG C6 N1 sing N N 140 DG N1 C2 sing N N 141 DG N1 H1 sing N N 142 DG C2 N2 sing N N 143 DG C2 N3 doub N N 144 DG N2 H21 sing N N 145 DG N2 H22 sing N N 146 DG N3 C4 sing N N 147 HOH O H1 sing N N 148 HOH O H2 sing N N 149 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1V3O 'b-form double helix' 1V3O 'mismatched base pair' 1V3O 'internal loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 8 1_555 -0.406 -0.153 0.178 -2.320 3.088 1.266 1 A_DG1:DC16_B A 1 ? B 16 ? 19 1 1 A C38 2 1_555 B DG 7 1_555 0.281 -0.050 -0.137 15.778 7.229 0.948 2 A_C382:DG15_B A 2 ? B 15 ? 19 1 1 A DG 3 1_555 B DA 6 1_555 6.379 -4.123 1.365 35.446 -12.617 14.482 3 A_DG3:DA14_B A 3 ? B 14 ? 11 9 1 A DA 6 1_555 B DG 3 1_555 -6.288 -4.203 1.742 -23.704 -14.916 18.192 4 A_DA6:DG11_B A 6 ? B 11 ? 11 9 1 A DG 7 1_555 B C38 2 1_555 -0.193 -0.073 -0.293 -17.800 3.390 -0.555 5 A_DG7:C3810_B A 7 ? B 10 ? 19 1 1 A DC 8 1_555 B DG 1 1_555 -0.050 -0.199 0.161 -2.851 4.111 -1.368 6 A_DC8:DG9_B A 8 ? B 9 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 8 1_555 A C38 2 1_555 B DG 7 1_555 0.305 -0.145 2.969 1.867 3.661 26.526 -1.169 -0.219 2.937 7.917 -4.039 26.837 1 AA_DG1C382:DG15DC16_BB A 1 ? B 16 ? A 2 ? B 15 ? 1 A C38 2 1_555 B DG 7 1_555 A DG 3 1_555 B DA 6 1_555 0.143 2.084 3.136 2.907 5.905 56.386 1.868 0.010 3.324 6.226 -3.065 56.737 2 AA_C382DG3:DA14DG15_BB A 2 ? B 15 ? A 3 ? B 14 ? 1 A DA 6 1_555 B DG 3 1_555 A DG 7 1_555 B C38 2 1_555 -1.026 1.610 3.418 1.927 10.372 54.130 1.075 1.233 3.611 11.277 -2.095 55.072 3 AA_DA6DG7:C3810DG11_BB A 6 ? B 11 ? A 7 ? B 10 ? 1 A DG 7 1_555 B C38 2 1_555 A DC 8 1_555 B DG 1 1_555 -0.522 0.048 3.000 -3.445 -0.742 29.405 0.238 0.347 3.037 -1.454 6.756 29.611 4 AA_DG7DC8:DG9C3810_BB A 7 ? B 10 ? A 8 ? B 9 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1V3N _pdbx_initial_refinement_model.details 'PDB ENTRY 1V3N' #