HEADER DNA 24-MAR-05 1Z7I TITLE 2'-ME-SE DERIVITATION OF A-DNA OCTAMER G(UMSE)GTACAC COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*GP*(UMS)P*GP*TP*AP*CP*AP*C)-3'; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: 2'-SELENIUM A-DNA DUPLEX; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: SOLID PHASE SYNTHESIS VIA PHOSPHORAMIDITE CHEMISTRY KEYWDS 2'-METHYLSELENO-URIDINE, SE-DNA, SELENIUM DERIVATIZATION, DNA EXPDTA X-RAY DIFFRACTION AUTHOR Z.HUANG,N.CARRASCO,J.JIANG REVDAT 4 14-FEB-24 1Z7I 1 REMARK LINK ATOM REVDAT 3 24-FEB-09 1Z7I 1 VERSN REVDAT 2 30-SEP-08 1Z7I 1 JRNL REVDAT 1 05-APR-05 1Z7I 0 JRNL AUTH J.JIANG,J.SHENG,N.CARRASCO,Z.HUANG JRNL TITL SELENIUM DERIVATIZATION OF NUCLEIC ACIDS FOR JRNL TITL 2 CRYSTALLOGRAPHY. JRNL REF NUCLEIC ACIDS RES. V. 35 477 2007 JRNL REFN ISSN 0305-1048 JRNL PMID 17169989 JRNL DOI 10.1093/NAR/GKL1070 REMARK 2 REMARK 2 RESOLUTION. 1.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : DNA-RNA_UMS.PAR REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 450767.650 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 89.3 REMARK 3 NUMBER OF REFLECTIONS : 5275 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 11.000 REMARK 3 FREE R VALUE TEST SET COUNT : 581 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.008 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.28 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.36 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 66.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 552 REMARK 3 BIN R VALUE (WORKING SET) : 0.2370 REMARK 3 BIN FREE R VALUE : 0.2310 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 12.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 81 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.026 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 162 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 44 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.70000 REMARK 3 B22 (A**2) : 0.70000 REMARK 3 B33 (A**2) : -1.41000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.13 REMARK 3 ESD FROM SIGMAA (A) : 0.11 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.15 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.10 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 1.800 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 33.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 2.070 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.230 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.500 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.280 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 1.920 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.30 REMARK 3 BSOL : 22.22 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : DNA-RNA_UMS.PAR REMARK 3 PARAMETER FILE 5 : CAC.PAR REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : UMS.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1Z7I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAR-05. REMARK 100 THE DEPOSITION ID IS D_1000032395. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-FEB-04 REMARK 200 TEMPERATURE (KELVIN) : 273 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979, 0.9794, 0.940, 0.920 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRANDEIS - B4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CBASS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6029 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.280 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 12.40 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.28 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 70.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD, MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% V/V MPD, 40 MM SODIUM CACODYLATE REMARK 280 (PH 6.0), 12 MM SPERMINE TETRA-HCL, 80 MM SODIUM CHLORIDE, 20 MM REMARK 280 MAGNESIUM CHLORIDE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 11.96750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 21.03800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 21.03800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 17.95125 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 21.03800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 21.03800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 5.98375 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 21.03800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 21.03800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 17.95125 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 21.03800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 21.03800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 5.98375 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 11.96750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 82 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG A 1 O4' - C1' - N9 ANGL. DEV. = -6.1 DEGREES REMARK 500 DG A 3 O4' - C1' - N9 ANGL. DEV. = -5.7 DEGREES REMARK 500 DT A 4 O4' - C1' - N1 ANGL. DEV. = -6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DC A 8 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 SPM A 50 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SPM A 50 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DNS RELATED DB: PDB REMARK 900 RELATED ID: 1D78 RELATED DB: PDB REMARK 900 RELATED ID: 1D79 RELATED DB: PDB DBREF 1Z7I A 1 8 PDB 1Z7I 1Z7I 1 8 SEQRES 1 A 8 DG UMS DG DT DA DC DA DC MODRES 1Z7I UMS A 2 DU HET UMS A 2 21 HET SPM A 50 3 HETNAM UMS 2'-METHYLSELENYL-2'-DEOXYURIDINE-5'-PHOSPHATE HETNAM SPM SPERMINE FORMUL 1 UMS C10 H15 N2 O8 P SE FORMUL 2 SPM C10 H26 N4 FORMUL 3 HOH *44(H2 O) LINK O3' DG A 1 P UMS A 2 1555 1555 1.59 LINK O3' UMS A 2 P DG A 3 1555 1555 1.58 SITE 1 AC1 5 DC A 6 DA A 7 HOH A 52 HOH A 61 SITE 2 AC1 5 HOH A 78 CRYST1 42.076 42.076 23.935 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023767 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023767 0.000000 0.00000 SCALE3 0.000000 0.000000 0.041780 0.00000 ATOM 1 O5' DG A 1 19.215 28.381 5.426 1.00 13.26 O ATOM 2 C5' DG A 1 17.807 28.299 5.255 1.00 12.18 C ATOM 3 C4' DG A 1 17.219 29.433 4.439 1.00 11.12 C ATOM 4 O4' DG A 1 17.392 30.625 5.246 1.00 11.04 O ATOM 5 C3' DG A 1 17.920 29.771 3.131 1.00 10.74 C ATOM 6 O3' DG A 1 17.424 29.032 2.052 1.00 11.07 O ATOM 7 C2' DG A 1 17.655 31.267 2.985 1.00 10.32 C ATOM 8 C1' DG A 1 17.584 31.782 4.408 1.00 10.12 C ATOM 9 N9 DG A 1 18.950 32.207 4.784 1.00 10.72 N ATOM 10 C8 DG A 1 19.940 31.477 5.405 1.00 10.64 C ATOM 11 N7 DG A 1 21.069 32.136 5.521 1.00 11.91 N ATOM 12 C5 DG A 1 20.806 33.386 4.966 1.00 10.06 C ATOM 13 C6 DG A 1 21.650 34.557 4.824 1.00 11.10 C ATOM 14 O6 DG A 1 22.833 34.716 5.206 1.00 12.32 O ATOM 15 N1 DG A 1 20.979 35.597 4.201 1.00 11.97 N ATOM 16 C2 DG A 1 19.671 35.555 3.782 1.00 12.61 C ATOM 17 N2 DG A 1 19.204 36.667 3.221 1.00 13.73 N ATOM 18 N3 DG A 1 18.877 34.499 3.908 1.00 11.55 N ATOM 19 C4 DG A 1 19.507 33.457 4.507 1.00 10.74 C HETATM 20 P UMS A 2 18.400 28.595 0.880 1.00 12.03 P HETATM 21 OP1 UMS A 2 17.605 27.715 -0.003 1.00 12.93 O HETATM 22 OP2 UMS A 2 19.691 28.137 1.414 1.00 14.32 O HETATM 23 O5' UMS A 2 18.713 29.917 0.118 1.00 11.01 O HETATM 24 C5' UMS A 2 17.674 30.623 -0.536 1.00 11.59 C HETATM 25 C4' UMS A 2 18.166 31.944 -1.081 1.00 10.88 C HETATM 26 O4' UMS A 2 18.462 32.777 0.065 1.00 11.18 O HETATM 27 C3' UMS A 2 19.483 31.954 -1.828 1.00 12.98 C HETATM 28 O3' UMS A 2 19.357 31.648 -3.141 1.00 14.63 O HETATM 29 C2' UMS A 2 19.918 33.399 -1.704 1.00 12.67 C HETATM 30 SE2' UMS A 2 18.649 34.619 -2.869 1.00 15.41 SE HETATM 31 C1' UMS A 2 19.457 33.751 -0.303 1.00 12.03 C HETATM 32 CA' UMS A 2 19.571 36.223 -2.662 1.00 15.97 C HETATM 33 N1 UMS A 2 20.636 33.399 0.595 1.00 11.49 N HETATM 34 C2 UMS A 2 21.581 34.405 0.724 1.00 11.16 C HETATM 35 O2 UMS A 2 21.487 35.472 0.141 1.00 13.11 O HETATM 36 N3 UMS A 2 22.652 34.119 1.531 1.00 10.81 N HETATM 37 C4 UMS A 2 22.903 32.936 2.179 1.00 10.10 C HETATM 38 O4 UMS A 2 23.922 32.811 2.856 1.00 11.76 O HETATM 39 C5 UMS A 2 21.895 31.903 1.990 1.00 10.90 C HETATM 40 C6 UMS A 2 20.810 32.185 1.233 1.00 11.43 C ATOM 41 P DG A 3 20.529 30.840 -3.834 1.00 17.00 P ATOM 42 OP1 DG A 3 19.778 30.405 -4.987 1.00 15.77 O ATOM 43 OP2 DG A 3 21.171 29.856 -2.922 1.00 16.22 O ATOM 44 O5' DG A 3 21.616 31.892 -4.178 1.00 15.91 O ATOM 45 C5' DG A 3 21.280 32.980 -5.004 1.00 15.67 C ATOM 46 C4' DG A 3 22.334 34.050 -4.926 1.00 14.26 C ATOM 47 O4' DG A 3 22.373 34.338 -3.502 1.00 15.44 O ATOM 48 C3' DG A 3 23.770 33.666 -5.271 1.00 14.21 C ATOM 49 O3' DG A 3 24.031 33.926 -6.620 1.00 13.71 O ATOM 50 C2' DG A 3 24.562 34.610 -4.379 1.00 14.56 C ATOM 51 C1' DG A 3 23.626 34.950 -3.216 1.00 12.97 C ATOM 52 N9 DG A 3 24.128 34.129 -2.100 1.00 11.07 N ATOM 53 C8 DG A 3 23.743 32.894 -1.620 1.00 11.33 C ATOM 54 N7 DG A 3 24.489 32.474 -0.621 1.00 11.54 N ATOM 55 C5 DG A 3 25.424 33.500 -0.429 1.00 8.93 C ATOM 56 C6 DG A 3 26.517 33.643 0.529 1.00 8.41 C ATOM 57 O6 DG A 3 26.871 32.857 1.426 1.00 9.75 O ATOM 58 N1 DG A 3 27.204 34.837 0.343 1.00 9.22 N ATOM 59 C2 DG A 3 26.912 35.775 -0.605 1.00 8.21 C ATOM 60 N2 DG A 3 27.698 36.862 -0.649 1.00 9.73 N ATOM 61 N3 DG A 3 25.918 35.667 -1.467 1.00 10.39 N ATOM 62 C4 DG A 3 25.220 34.515 -1.323 1.00 9.99 C ATOM 63 P DT A 4 25.369 33.415 -7.286 1.00 14.35 P ATOM 64 OP1 DT A 4 25.171 33.738 -8.732 1.00 17.25 O ATOM 65 OP2 DT A 4 25.688 32.094 -6.908 1.00 14.62 O ATOM 66 O5' DT A 4 26.511 34.310 -6.718 1.00 12.35 O ATOM 67 C5' DT A 4 26.540 35.677 -7.033 1.00 13.07 C ATOM 68 C4' DT A 4 27.772 36.333 -6.460 1.00 12.87 C ATOM 69 O4' DT A 4 27.625 36.223 -5.019 1.00 12.10 O ATOM 70 C3' DT A 4 29.080 35.625 -6.774 1.00 12.35 C ATOM 71 O3' DT A 4 29.654 36.162 -7.930 1.00 12.99 O ATOM 72 C2' DT A 4 29.928 35.921 -5.543 1.00 12.66 C ATOM 73 C1' DT A 4 28.930 36.180 -4.425 1.00 11.55 C ATOM 74 N1 DT A 4 28.859 34.908 -3.597 1.00 10.98 N ATOM 75 C2 DT A 4 29.749 34.822 -2.550 1.00 9.55 C ATOM 76 O2 DT A 4 30.598 35.665 -2.345 1.00 9.79 O ATOM 77 N3 DT A 4 29.634 33.699 -1.768 1.00 7.93 N ATOM 78 C4 DT A 4 28.747 32.652 -1.955 1.00 8.42 C ATOM 79 O4 DT A 4 28.721 31.728 -1.158 1.00 9.50 O ATOM 80 C5 DT A 4 27.894 32.771 -3.115 1.00 9.60 C ATOM 81 C7 DT A 4 26.944 31.660 -3.439 1.00 12.34 C ATOM 82 C6 DT A 4 27.982 33.875 -3.858 1.00 10.69 C ATOM 83 P DA A 5 30.801 35.389 -8.667 1.00 14.38 P ATOM 84 OP1 DA A 5 30.925 36.075 -9.995 1.00 16.99 O ATOM 85 OP2 DA A 5 30.632 33.928 -8.620 1.00 16.77 O ATOM 86 O5' DA A 5 32.022 35.754 -7.784 1.00 12.00 O ATOM 87 C5' DA A 5 33.043 34.818 -7.507 1.00 12.07 C ATOM 88 C4' DA A 5 33.964 35.414 -6.475 1.00 9.45 C ATOM 89 O4' DA A 5 33.155 35.484 -5.265 1.00 10.56 O ATOM 90 C3' DA A 5 35.145 34.529 -6.121 1.00 11.07 C ATOM 91 O3' DA A 5 36.286 34.910 -6.822 1.00 11.08 O ATOM 92 C2' DA A 5 35.297 34.711 -4.625 1.00 10.93 C ATOM 93 C1' DA A 5 33.874 34.963 -4.154 1.00 9.15 C ATOM 94 N9 DA A 5 33.210 33.710 -3.736 1.00 7.78 N ATOM 95 C8 DA A 5 32.159 33.066 -4.363 1.00 8.36 C ATOM 96 N7 DA A 5 31.712 32.027 -3.694 1.00 8.69 N ATOM 97 C5 DA A 5 32.533 31.964 -2.577 1.00 7.89 C ATOM 98 C6 DA A 5 32.575 31.100 -1.463 1.00 7.35 C ATOM 99 N6 DA A 5 31.724 30.087 -1.298 1.00 8.31 N ATOM 100 N1 DA A 5 33.519 31.314 -0.522 1.00 8.07 N ATOM 101 C2 DA A 5 34.369 32.325 -0.703 1.00 8.06 C ATOM 102 N3 DA A 5 34.435 33.209 -1.696 1.00 7.56 N ATOM 103 C4 DA A 5 33.478 32.974 -2.605 1.00 7.17 C ATOM 104 P DC A 6 37.252 33.788 -7.387 1.00 12.15 P ATOM 105 OP1 DC A 6 38.306 34.500 -8.165 1.00 15.19 O ATOM 106 OP2 DC A 6 36.512 32.691 -8.004 1.00 13.89 O ATOM 107 O5' DC A 6 37.898 33.159 -6.118 1.00 10.71 O ATOM 108 C5' DC A 6 38.735 33.945 -5.293 1.00 10.29 C ATOM 109 C4' DC A 6 39.156 33.204 -4.050 1.00 10.84 C ATOM 110 O4' DC A 6 37.963 33.069 -3.229 1.00 11.01 O ATOM 111 C3' DC A 6 39.633 31.787 -4.250 1.00 11.23 C ATOM 112 O3' DC A 6 40.984 31.710 -4.588 1.00 13.66 O ATOM 113 C2' DC A 6 39.302 31.150 -2.909 1.00 11.90 C ATOM 114 C1' DC A 6 38.021 31.853 -2.490 1.00 10.62 C ATOM 115 N1 DC A 6 36.868 31.012 -2.875 1.00 9.49 N ATOM 116 C2 DC A 6 36.494 29.990 -2.002 1.00 8.85 C ATOM 117 O2 DC A 6 37.195 29.804 -0.990 1.00 10.60 O ATOM 118 N3 DC A 6 35.419 29.223 -2.286 1.00 8.82 N ATOM 119 C4 DC A 6 34.741 29.418 -3.405 1.00 8.64 C ATOM 120 N4 DC A 6 33.692 28.632 -3.642 1.00 9.21 N ATOM 121 C5 DC A 6 35.109 30.430 -4.340 1.00 7.81 C ATOM 122 C6 DC A 6 36.177 31.198 -4.046 1.00 8.77 C ATOM 123 P DA A 7 41.499 30.468 -5.406 1.00 15.12 P ATOM 124 OP1 DA A 7 42.871 30.820 -5.918 1.00 16.03 O ATOM 125 OP2 DA A 7 40.475 29.942 -6.356 1.00 15.74 O ATOM 126 O5' DA A 7 41.622 29.360 -4.333 1.00 13.12 O ATOM 127 C5' DA A 7 42.476 29.545 -3.209 1.00 12.78 C ATOM 128 C4' DA A 7 42.453 28.341 -2.300 1.00 10.98 C ATOM 129 O4' DA A 7 41.121 28.288 -1.727 1.00 10.96 O ATOM 130 C3' DA A 7 42.628 27.013 -3.009 1.00 11.87 C ATOM 131 O3' DA A 7 43.971 26.619 -2.991 1.00 13.09 O ATOM 132 C2' DA A 7 41.748 26.051 -2.231 1.00 12.03 C ATOM 133 C1' DA A 7 40.702 26.945 -1.581 1.00 9.29 C ATOM 134 N9 DA A 7 39.440 26.824 -2.307 1.00 9.66 N ATOM 135 C8 DA A 7 39.019 27.548 -3.374 1.00 9.60 C ATOM 136 N7 DA A 7 37.808 27.235 -3.786 1.00 9.23 N ATOM 137 C5 DA A 7 37.422 26.222 -2.922 1.00 8.20 C ATOM 138 C6 DA A 7 36.240 25.459 -2.801 1.00 8.45 C ATOM 139 N6 DA A 7 35.160 25.630 -3.571 1.00 9.36 N ATOM 140 N1 DA A 7 36.194 24.519 -1.853 1.00 10.28 N ATOM 141 C2 DA A 7 37.256 24.356 -1.066 1.00 10.70 C ATOM 142 N3 DA A 7 38.418 25.015 -1.071 1.00 9.51 N ATOM 143 C4 DA A 7 38.427 25.947 -2.019 1.00 8.19 C ATOM 144 P DC A 8 44.520 25.708 -4.150 1.00 14.51 P ATOM 145 OP1 DC A 8 45.995 25.706 -3.946 1.00 16.73 O ATOM 146 OP2 DC A 8 43.954 26.123 -5.468 1.00 17.40 O ATOM 147 O5' DC A 8 43.982 24.301 -3.806 1.00 13.67 O ATOM 148 C5' DC A 8 44.328 23.666 -2.552 1.00 14.56 C ATOM 149 C4' DC A 8 43.691 22.295 -2.420 1.00 14.71 C ATOM 150 O4' DC A 8 42.255 22.501 -2.347 1.00 15.31 O ATOM 151 C3' DC A 8 43.927 21.293 -3.554 1.00 16.29 C ATOM 152 O3' DC A 8 44.035 19.987 -3.001 1.00 19.30 O ATOM 153 C2' DC A 8 42.633 21.338 -4.347 1.00 16.94 C ATOM 154 C1' DC A 8 41.592 21.661 -3.278 1.00 15.60 C ATOM 155 N1 DC A 8 40.422 22.397 -3.806 1.00 13.87 N ATOM 156 C2 DC A 8 39.120 21.897 -3.581 1.00 12.87 C ATOM 157 O2 DC A 8 38.968 20.934 -2.841 1.00 12.82 O ATOM 158 N3 DC A 8 38.082 22.488 -4.181 1.00 10.86 N ATOM 159 C4 DC A 8 38.268 23.541 -4.961 1.00 11.43 C ATOM 160 N4 DC A 8 37.215 24.047 -5.600 1.00 11.47 N ATOM 161 C5 DC A 8 39.557 24.121 -5.148 1.00 12.39 C ATOM 162 C6 DC A 8 40.594 23.524 -4.553 1.00 13.45 C TER 163 DC A 8 HETATM 164 N5 SPM A 50 35.072 27.012 -6.428 1.00 21.77 N HETATM 165 C6 SPM A 50 36.227 27.619 -6.051 1.00 24.43 C HETATM 166 C7 SPM A 50 37.425 28.609 -6.278 1.00 22.53 C HETATM 167 O HOH A 51 35.899 35.624 -1.341 1.00 9.76 O HETATM 168 O HOH A 52 47.179 25.397 -1.655 1.00 16.57 O HETATM 169 O HOH A 53 38.131 36.735 -2.563 1.00 15.37 O HETATM 170 O HOH A 54 40.819 23.610 0.072 1.00 17.02 O HETATM 171 O HOH A 55 19.876 27.512 8.051 1.00 19.73 O HETATM 172 O HOH A 56 24.456 29.955 0.625 1.00 19.14 O HETATM 173 O HOH A 57 16.680 25.336 0.904 1.00 18.19 O HETATM 174 O HOH A 58 20.788 38.072 0.188 1.00 16.29 O HETATM 175 O HOH A 59 25.835 31.053 2.924 1.00 17.63 O HETATM 176 O HOH A 60 27.779 29.198 -0.901 1.00 20.97 O HETATM 177 O HOH A 61 24.665 33.307 6.523 1.00 18.45 O HETATM 178 O HOH A 62 25.552 37.620 -3.388 1.00 18.60 O HETATM 179 O HOH A 63 28.214 30.738 -6.754 1.00 20.91 O HETATM 180 O HOH A 64 21.893 28.772 -0.197 1.00 22.42 O HETATM 181 O HOH A 65 40.639 18.016 -4.060 1.00 22.50 O HETATM 182 O HOH A 66 42.154 25.511 -7.132 1.00 20.43 O HETATM 183 O HOH A 67 40.237 27.321 -7.392 1.00 22.74 O HETATM 184 O HOH A 68 29.964 30.144 -4.765 1.00 23.05 O HETATM 185 O HOH A 69 23.230 30.706 6.613 1.00 28.84 O HETATM 186 O HOH A 70 17.253 27.161 -2.569 1.00 26.67 O HETATM 187 O HOH A 71 39.245 37.001 -7.139 1.00 24.97 O HETATM 188 O HOH A 72 24.615 29.643 -5.731 1.00 30.66 O HETATM 189 O HOH A 73 25.378 38.822 -5.902 1.00 26.49 O HETATM 190 O HOH A 74 31.742 26.408 -5.127 1.00 31.28 O HETATM 191 O HOH A 75 24.066 29.151 -3.431 1.00 27.42 O HETATM 192 O HOH A 76 32.147 28.889 -6.323 1.00 25.02 O HETATM 193 O HOH A 77 28.024 29.787 3.015 1.00 33.72 O HETATM 194 O HOH A 78 35.843 30.138 -7.908 1.00 27.43 O HETATM 195 O HOH A 79 38.589 30.080 -11.287 1.00 35.37 O HETATM 196 O HOH A 80 44.573 28.818 -6.553 1.00 32.87 O HETATM 197 O HOH A 81 28.490 36.772 -11.597 1.00 32.04 O HETATM 198 O HOH A 82 38.578 38.578 0.000 0.50 25.92 O HETATM 199 O HOH A 83 41.788 18.348 -1.340 1.00 31.16 O HETATM 200 O HOH A 84 35.269 28.735 -9.955 1.00 34.40 O HETATM 201 O HOH A 85 25.490 28.509 -1.209 1.00 32.13 O HETATM 202 O HOH A 86 27.789 33.472 -10.901 1.00 36.80 O HETATM 203 O HOH A 87 33.010 31.095 -7.509 1.00 32.27 O HETATM 204 O HOH A 88 20.914 27.149 10.752 1.00 32.68 O HETATM 205 O HOH A 89 42.766 26.198 -9.699 1.00 31.03 O HETATM 206 O HOH A 90 40.677 31.238 -9.324 1.00 39.10 O HETATM 207 O HOH A 91 41.798 28.876 -9.742 1.00 35.93 O HETATM 208 O HOH A 92 33.112 37.335 -10.964 1.00 28.24 O HETATM 209 O HOH A 93 40.758 26.327 -11.980 1.00 36.49 O HETATM 210 O HOH A 94 35.472 36.463 -10.398 1.00 37.62 O CONECT 6 20 CONECT 20 6 21 22 23 CONECT 21 20 CONECT 22 20 CONECT 23 20 24 CONECT 24 23 25 CONECT 25 24 26 27 CONECT 26 25 31 CONECT 27 25 28 29 CONECT 28 27 41 CONECT 29 27 30 31 CONECT 30 29 32 CONECT 31 26 29 33 CONECT 32 30 CONECT 33 31 34 40 CONECT 34 33 35 36 CONECT 35 34 CONECT 36 34 37 CONECT 37 36 38 39 CONECT 38 37 CONECT 39 37 40 CONECT 40 33 39 CONECT 41 28 CONECT 164 165 CONECT 165 164 166 CONECT 166 165 MASTER 301 0 2 0 0 0 2 6 209 1 26 1 END