0.016461
0.009504
0.000000
0.000000
0.019007
0.000000
0.000000
0.000000
0.010309
0.00000
0.00000
0.00000
Vetter, I.R.
Baase, W.A.
Heinz, D.W.
Xiong, J.-P.
Snow, S.
Matthews, B.W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
60.750
60.750
97.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C4 H10 O2 S2
154.251
2-HYDROXYETHYL DISULFIDE
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
C
N
138
N
O
N
139
N
C
N
140
N
S
N
141
N
S
N
142
N
C
N
143
N
C
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
N
N
156
S
C
N
157
N
C
N
158
N
O
N
159
N
C
Y
160
N
C
Y
161
N
N
Y
162
N
C
Y
163
N
C
Y
164
N
N
N
165
N
O
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
O
N
177
N
H
N
178
N
H
N
179
N
N
N
180
S
C
N
181
N
C
N
182
N
O
N
183
S
C
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
O
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
N
N
202
S
C
N
203
N
C
N
204
N
O
N
205
N
C
N
206
N
C
N
207
N
C
N
208
N
C
N
209
N
O
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
N
N
224
S
C
N
225
N
C
N
226
N
O
N
227
N
C
N
228
N
C
N
229
N
C
N
230
N
C
N
231
N
N
N
232
N
O
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
N
N
249
S
C
N
250
N
C
N
251
N
O
N
252
N
C
N
253
N
C
N
254
N
S
N
255
N
C
N
256
N
O
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
N
N
269
S
C
N
270
N
C
N
271
N
O
N
272
N
C
Y
273
N
C
Y
274
N
C
Y
275
N
C
Y
276
N
C
Y
277
N
C
Y
278
N
C
N
279
N
O
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
N
296
N
C
N
297
N
C
N
298
N
O
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
N
N
309
S
C
N
310
N
C
N
311
N
O
N
312
N
C
N
313
N
O
N
314
N
O
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
N
N
323
S
C
N
324
N
C
N
325
N
O
N
326
R
C
N
327
N
O
N
328
N
C
N
329
N
O
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
N
N
340
S
C
N
341
N
C
N
342
N
O
N
343
N
C
Y
344
N
C
Y
345
N
C
Y
346
N
C
Y
347
N
N
Y
348
N
C
Y
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
N
353
N
O
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
N
N
367
S
C
N
368
N
C
N
369
N
O
N
370
N
C
Y
371
N
C
Y
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
N
377
N
O
N
378
N
O
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
N
N
391
S
C
N
392
N
C
N
393
N
O
N
394
N
C
N
395
N
C
N
396
N
C
N
397
N
O
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
Y
157
N
sing
Y
158
N
doub
Y
159
N
doub
N
160
N
sing
Y
161
N
sing
N
162
N
sing
Y
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
doub
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
doub
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
Y
265
N
doub
Y
266
N
sing
Y
267
N
sing
N
268
N
sing
Y
269
N
doub
N
270
N
sing
Y
271
N
doub
N
272
N
sing
Y
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
doub
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
doub
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
Y
334
N
doub
Y
335
N
sing
Y
336
N
sing
N
337
N
sing
Y
338
N
doub
Y
339
N
sing
Y
340
N
sing
N
341
N
sing
Y
342
N
sing
Y
343
N
doub
N
344
N
sing
Y
345
N
doub
N
346
N
sing
Y
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
doub
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
Y
362
N
doub
Y
363
N
sing
Y
364
N
sing
N
365
N
sing
Y
366
N
doub
N
367
N
sing
Y
368
N
doub
N
369
N
sing
Y
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
doub
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
US
Protein Sci.
PRCIEI
0795
0961-8368
5
2399
2415
8976549
Protein structural plasticity exemplified by insertion and deletion mutants in T4 lysozyme.
1996
UK
Nature
NATUAS
0006
0028-0836
361
561
How Amino-Acid Insertions are Allowed in an Alpha-Helix of T4 Lysozyme
1993
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
193
189
Structure of Bacteriophage T4 Lysozyme Refined at 1.7 A Resolution
1987
10.2210/pdb210l/pdb
pdb_0000210l
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
AREA DETECTOR
1994-08-30
XUONG-HAMLIN MULTIWIRE
M
x-ray
1
1.5418
1.0
1.5418
18557.285
T4 LYSOZYME
3.2.1.17
C54T, DEL(A73), C97A
1
man
polymer
154.251
2-HYDROXYETHYL DISULFIDE
2
syn
non-polymer
18.015
water
110
nat
water
no
no
MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAVRGILRN
AKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAY
KNL
MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAVRGILRN
AKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAY
KNL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
T4-like viruses
Enterobacteria phage T4 sensu lato
Escherichia
sample
T4 LYSOZYME GENE
10665
Enterobacteria phage T4
T4 LYSOZYME GENE
562
Escherichia coli
M13
2.83
48.2
database_2
pdbx_database_status
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Other
Data collection
1
0
1996-12-23
1
1
2008-03-24
1
2
2011-07-13
1
3
2021-11-03
1
4
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
NATIVE ENZYME
NATIVE ENZYME
Y
BNL
1996-09-23
REL
REL
HED
2-HYDROXYETHYL DISULFIDE
HOH
water
HED
169
2
HED
HED
169
A
HED
170
2
HED
HED
170
A
HOH
171
3
HOH
HOH
171
A
HOH
172
3
HOH
HOH
172
A
HOH
173
3
HOH
HOH
173
A
HOH
174
3
HOH
HOH
174
A
HOH
175
3
HOH
HOH
175
A
HOH
176
3
HOH
HOH
176
A
HOH
177
3
HOH
HOH
177
A
HOH
178
3
HOH
HOH
178
A
HOH
179
3
HOH
HOH
179
A
HOH
180
3
HOH
HOH
180
A
HOH
181
3
HOH
HOH
181
A
HOH
182
3
HOH
HOH
182
A
HOH
183
3
HOH
HOH
183
A
HOH
184
3
HOH
HOH
184
A
HOH
185
3
HOH
HOH
185
A
HOH
186
3
HOH
HOH
186
A
HOH
187
3
HOH
HOH
187
A
HOH
188
3
HOH
HOH
188
A
HOH
189
3
HOH
HOH
189
A
HOH
190
3
HOH
HOH
190
A
HOH
191
3
HOH
HOH
191
A
HOH
192
3
HOH
HOH
192
A
HOH
193
3
HOH
HOH
193
A
HOH
194
3
HOH
HOH
194
A
HOH
195
3
HOH
HOH
195
A
HOH
196
3
HOH
HOH
196
A
HOH
197
3
HOH
HOH
197
A
HOH
198
3
HOH
HOH
198
A
HOH
199
3
HOH
HOH
199
A
HOH
200
3
HOH
HOH
200
A
HOH
201
3
HOH
HOH
201
A
HOH
202
3
HOH
HOH
202
A
HOH
203
3
HOH
HOH
203
A
HOH
204
3
HOH
HOH
204
A
HOH
205
3
HOH
HOH
205
A
HOH
206
3
HOH
HOH
206
A
HOH
207
3
HOH
HOH
207
A
HOH
208
3
HOH
HOH
208
A
HOH
209
3
HOH
HOH
209
A
HOH
210
3
HOH
HOH
210
A
HOH
211
3
HOH
HOH
211
A
HOH
212
3
HOH
HOH
212
A
HOH
213
3
HOH
HOH
213
A
HOH
214
3
HOH
HOH
214
A
HOH
215
3
HOH
HOH
215
A
HOH
216
3
HOH
HOH
216
A
HOH
217
3
HOH
HOH
217
A
HOH
221
3
HOH
HOH
221
A
HOH
222
3
HOH
HOH
222
A
HOH
223
3
HOH
HOH
223
A
HOH
224
3
HOH
HOH
224
A
HOH
225
3
HOH
HOH
225
A
HOH
226
3
HOH
HOH
226
A
HOH
227
3
HOH
HOH
227
A
HOH
228
3
HOH
HOH
228
A
HOH
229
3
HOH
HOH
229
A
HOH
230
3
HOH
HOH
230
A
HOH
231
3
HOH
HOH
231
A
HOH
232
3
HOH
HOH
232
A
HOH
233
3
HOH
HOH
233
A
HOH
234
3
HOH
HOH
234
A
HOH
235
3
HOH
HOH
235
A
HOH
236
3
HOH
HOH
236
A
HOH
237
3
HOH
HOH
237
A
HOH
238
3
HOH
HOH
238
A
HOH
239
3
HOH
HOH
239
A
HOH
240
3
HOH
HOH
240
A
HOH
241
3
HOH
HOH
241
A
HOH
242
3
HOH
HOH
242
A
HOH
244
3
HOH
HOH
244
A
HOH
245
3
HOH
HOH
245
A
HOH
247
3
HOH
HOH
247
A
HOH
248
3
HOH
HOH
248
A
HOH
250
3
HOH
HOH
250
A
HOH
251
3
HOH
HOH
251
A
HOH
252
3
HOH
HOH
252
A
HOH
253
3
HOH
HOH
253
A
HOH
254
3
HOH
HOH
254
A
HOH
255
3
HOH
HOH
255
A
HOH
261
3
HOH
HOH
261
A
HOH
262
3
HOH
HOH
262
A
HOH
263
3
HOH
HOH
263
A
HOH
265
3
HOH
HOH
265
A
HOH
266
3
HOH
HOH
266
A
HOH
267
3
HOH
HOH
267
A
HOH
268
3
HOH
HOH
268
A
HOH
269
3
HOH
HOH
269
A
HOH
270
3
HOH
HOH
270
A
HOH
272
3
HOH
HOH
272
A
HOH
273
3
HOH
HOH
273
A
HOH
274
3
HOH
HOH
274
A
HOH
276
3
HOH
HOH
276
A
HOH
277
3
HOH
HOH
277
A
HOH
278
3
HOH
HOH
278
A
HOH
279
3
HOH
HOH
279
A
HOH
281
3
HOH
HOH
281
A
HOH
282
3
HOH
HOH
282
A
HOH
284
3
HOH
HOH
284
A
HOH
292
3
HOH
HOH
292
A
HOH
293
3
HOH
HOH
293
A
HOH
294
3
HOH
HOH
294
A
HOH
295
3
HOH
HOH
295
A
HOH
296
3
HOH
HOH
296
A
HOH
298
3
HOH
HOH
298
A
HOH
299
3
HOH
HOH
299
A
HOH
300
3
HOH
HOH
300
A
HOH
301
3
HOH
HOH
301
A
HOH
302
3
HOH
HOH
302
A
HOH
303
3
HOH
HOH
303
A
HOH
305
3
HOH
HOH
305
A
MET
1
n
1
MET
1
A
ASN
2
n
2
ASN
2
A
ILE
3
n
3
ILE
3
A
PHE
4
n
4
PHE
4
A
GLU
5
n
5
GLU
5
A
MET
6
n
6
MET
6
A
LEU
7
n
7
LEU
7
A
ARG
8
n
8
ARG
8
A
ILE
9
n
9
ILE
9
A
ASP
10
n
10
ASP
10
A
GLU
11
n
11
GLU
11
A
GLY
12
n
12
GLY
12
A
LEU
13
n
13
LEU
13
A
ARG
14
n
14
ARG
14
A
LEU
15
n
15
LEU
15
A
LYS
16
n
16
LYS
16
A
ILE
17
n
17
ILE
17
A
TYR
18
n
18
TYR
18
A
LYS
19
n
19
LYS
19
A
ASP
20
n
20
ASP
20
A
THR
21
n
21
THR
21
A
GLU
22
n
22
GLU
22
A
GLY
23
n
23
GLY
23
A
TYR
24
n
24
TYR
24
A
TYR
25
n
25
TYR
25
A
THR
26
n
26
THR
26
A
ILE
27
n
27
ILE
27
A
GLY
28
n
28
GLY
28
A
ILE
29
n
29
ILE
29
A
GLY
30
n
30
GLY
30
A
HIS
31
n
31
HIS
31
A
LEU
32
n
32
LEU
32
A
LEU
33
n
33
LEU
33
A
THR
34
n
34
THR
34
A
LYS
35
n
35
LYS
35
A
SER
36
n
36
SER
36
A
PRO
37
n
37
PRO
37
A
SER
38
n
38
SER
38
A
LEU
39
n
39
LEU
39
A
ASN
40
n
40
ASN
40
A
ALA
41
n
41
ALA
41
A
ALA
42
n
42
ALA
42
A
LYS
43
n
43
LYS
43
A
SER
44
n
44
SER
44
A
GLU
45
n
45
GLU
45
A
LEU
46
n
46
LEU
46
A
ASP
47
n
47
ASP
47
A
LYS
48
n
48
LYS
48
A
ALA
49
n
49
ALA
49
A
ILE
50
n
50
ILE
50
A
GLY
51
n
51
GLY
51
A
ARG
52
n
52
ARG
52
A
ASN
53
n
53
ASN
53
A
THR
54
n
54
THR
54
A
ASN
55
n
55
ASN
55
A
GLY
56
n
56
GLY
56
A
VAL
57
n
57
VAL
57
A
ILE
58
n
58
ILE
58
A
THR
59
n
59
THR
59
A
LYS
60
n
60
LYS
60
A
ASP
61
n
61
ASP
61
A
GLU
62
n
62
GLU
62
A
ALA
63
n
63
ALA
63
A
GLU
64
n
64
GLU
64
A
LYS
65
n
65
LYS
65
A
LEU
66
n
66
LEU
66
A
PHE
67
n
67
PHE
67
A
ASN
68
n
68
ASN
68
A
GLN
69
n
69
GLN
69
A
ASP
70
n
70
ASP
70
A
VAL
71
n
71
VAL
71
A
ASP
72
n
72
ASP
72
A
ALA
74
n
73
ALA
74
A
VAL
75
n
74
VAL
75
A
ARG
76
n
75
ARG
76
A
GLY
77
n
76
GLY
77
A
ILE
78
n
77
ILE
78
A
LEU
79
n
78
LEU
79
A
ARG
80
n
79
ARG
80
A
ASN
81
n
80
ASN
81
A
ALA
82
n
81
ALA
82
A
LYS
83
n
82
LYS
83
A
LEU
84
n
83
LEU
84
A
LYS
85
n
84
LYS
85
A
PRO
86
n
85
PRO
86
A
VAL
87
n
86
VAL
87
A
TYR
88
n
87
TYR
88
A
ASP
89
n
88
ASP
89
A
SER
90
n
89
SER
90
A
LEU
91
n
90
LEU
91
A
ASP
92
n
91
ASP
92
A
ALA
93
n
92
ALA
93
A
VAL
94
n
93
VAL
94
A
ARG
95
n
94
ARG
95
A
ARG
96
n
95
ARG
96
A
ALA
97
n
96
ALA
97
A
ALA
98
n
97
ALA
98
A
LEU
99
n
98
LEU
99
A
ILE
100
n
99
ILE
100
A
ASN
101
n
100
ASN
101
A
MET
102
n
101
MET
102
A
VAL
103
n
102
VAL
103
A
PHE
104
n
103
PHE
104
A
GLN
105
n
104
GLN
105
A
MET
106
n
105
MET
106
A
GLY
107
n
106
GLY
107
A
GLU
108
n
107
GLU
108
A
THR
109
n
108
THR
109
A
GLY
110
n
109
GLY
110
A
VAL
111
n
110
VAL
111
A
ALA
112
n
111
ALA
112
A
GLY
113
n
112
GLY
113
A
PHE
114
n
113
PHE
114
A
THR
115
n
114
THR
115
A
ASN
116
n
115
ASN
116
A
SER
117
n
116
SER
117
A
LEU
118
n
117
LEU
118
A
ARG
119
n
118
ARG
119
A
MET
120
n
119
MET
120
A
LEU
121
n
120
LEU
121
A
GLN
122
n
121
GLN
122
A
GLN
123
n
122
GLN
123
A
LYS
124
n
123
LYS
124
A
ARG
125
n
124
ARG
125
A
TRP
126
n
125
TRP
126
A
ASP
127
n
126
ASP
127
A
GLU
128
n
127
GLU
128
A
ALA
129
n
128
ALA
129
A
ALA
130
n
129
ALA
130
A
VAL
131
n
130
VAL
131
A
ASN
132
n
131
ASN
132
A
LEU
133
n
132
LEU
133
A
ALA
134
n
133
ALA
134
A
LYS
135
n
134
LYS
135
A
SER
136
n
135
SER
136
A
ARG
137
n
136
ARG
137
A
TRP
138
n
137
TRP
138
A
TYR
139
n
138
TYR
139
A
ASN
140
n
139
ASN
140
A
GLN
141
n
140
GLN
141
A
THR
142
n
141
THR
142
A
PRO
143
n
142
PRO
143
A
ASN
144
n
143
ASN
144
A
ARG
145
n
144
ARG
145
A
ALA
146
n
145
ALA
146
A
LYS
147
n
146
LYS
147
A
ARG
148
n
147
ARG
148
A
VAL
149
n
148
VAL
149
A
ILE
150
n
149
ILE
150
A
THR
151
n
150
THR
151
A
THR
152
n
151
THR
152
A
PHE
153
n
152
PHE
153
A
ARG
154
n
153
ARG
154
A
THR
155
n
154
THR
155
A
GLY
156
n
155
GLY
156
A
THR
157
n
156
THR
157
A
TRP
158
n
157
TRP
158
A
ASP
159
n
158
ASP
159
A
ALA
160
n
159
ALA
160
A
TYR
161
n
160
TYR
161
A
LYS
162
n
161
LYS
162
A
n
162
163
A
n
163
164
A
0.1730000
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
TYR
25
A
O
TYR
25
A
N
THR
34
A
N
THR
34
1
A
ASN
163
A
ASN
162
1
Y
1
A
LEU
164
A
LEU
163
1
Y
1
A
TYR
88
0.124
SIDE CHAIN
1
-13.38
2.10
128.40
115.02
A
A
A
C
N
CD
SER
PRO
PRO
36
37
37
Y
1
-8.35
0.90
118.30
109.95
A
A
A
CB
CG
OD2
ASP
ASP
ASP
61
61
61
N
1
-8.68
0.90
118.30
109.62
A
A
A
CB
CG
OD2
ASP
ASP
ASP
72
72
72
N
1
6.17
0.50
120.30
126.47
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
80
80
80
N
1
-10.96
1.10
117.90
106.94
A
A
A
CD1
CG
CD2
TYR
TYR
TYR
88
88
88
N
1
3.86
0.60
121.00
124.86
A
A
A
CB
CG
CD1
TYR
TYR
TYR
88
88
88
N
1
7.06
0.80
121.30
128.36
A
A
A
CG
CD1
CE1
TYR
TYR
TYR
88
88
88
N
1
-7.30
0.90
118.30
111.00
A
A
A
CB
CG
OD2
ASP
ASP
ASP
89
89
89
N
1
-5.60
0.90
118.30
112.70
A
A
A
CB
CG
OD1
ASP
ASP
ASP
92
92
92
N
1
5.74
0.90
118.30
124.04
A
A
A
CB
CG
OD1
ASP
ASP
ASP
127
127
127
N
1
-5.48
0.90
118.30
112.82
A
A
A
CB
CG
OD2
ASP
ASP
ASP
159
159
159
N
1
A
A
CD
OE2
GLU
GLU
22
22
0.081
0.011
1.252
1.333
N
1
A
A
CD
OE2
GLU
GLU
64
64
0.071
0.011
1.252
1.323
N
1
A
A
CD
OE2
GLU
GLU
128
128
0.070
0.011
1.252
1.322
N
1
A
A
O
O
HOH
HOH
217
217
2.11
1_555
5_555
1
A
ASN
81
-42.83
177.37
1
A
ARG
125
-101.08
74.16
RESIDUES 162 - 164 IN WILD-TYPE AND ALL MUTANT LYSOZYMES
ARE EXTREMELY MOBILE. THUS THE COORDINATES FOR THESE
RESIDUES ARE VERY UNRELIABLE. THIS ENTRY DOES NOT INCLUDE
RESIDUES 163 AND 164.
0.1730000
1.89
26.33
16587
16587
96.4
1
0.0
1.89
26.33
110
1413
16
0
1287
0.017
0.8
2.377
1.5
15.4
0.0
0.022
3.0
1.89
26.33
210L
16587
0.0
0.0737000
1
3.5
96.4
refinement
TNT
data reduction
UCSD
PROTEIN STRUCTURE PLASTICITY EXEMPLIFIED BY INSERTION AND DELETION MUTANTS IN T4 LYSOZYME
1
N
N
2
N
N
2
N
N
3
N
N
A
ILE
3
A
ILE
3
HELX_P
A
GLU
11
A
GLU
11
1
1
9
A
LEU
39
A
LEU
39
HELX_P
A
ILE
50
A
ILE
50
1
2
12
A
LYS
60
A
LYS
60
HELX_P
A
ARG
80
A
ARG
79
1
3
20
A
LYS
85
A
LYS
84
HELX_P
A
SER
90
A
SER
89
1
4
6
A
ALA
93
A
ALA
92
HELX_P
A
GLN
122
A
GLN
121
1
5
30
A
TRP
126
A
TRP
125
HELX_P
A
ALA
134
A
ALA
133
1
6
9
A
ARG
137
A
ARG
136
HELX_P
A
GLN
141
A
GLN
140
1
7
5
A
PRO
143
A
PRO
142
HELX_P
A
THR
155
A
THR
154
1
8
13
HYDROLASE (O-GLYCOSYL)
HYDROLASE (O-GLYCOSYL), M13 PLASMID, BACTERIOLYTIC ENZYME
LYS_BPT4
UNP
1
1
P00720
MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNCNGVITKDEAEKLFNQDVDAAVRGILR
NAKLKPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDA
YKNL
1
164
210L
1
164
P00720
A
1
1
163
1
CYS
engineered mutation
THR
54
210L
A
P00720
UNP
54
54
1
ALA
deletion
210L
A
P00720
UNP
73
1
CYS
engineered mutation
ALA
97
210L
A
P00720
UNP
97
96
2
anti-parallel
A
TYR
25
A
TYR
25
A
ILE
27
A
ILE
27
A
HIS
31
A
HIS
31
A
THR
34
A
THR
34
BINDING SITE FOR RESIDUE HED A 169
A
HED
169
Software
6
BINDING SITE FOR RESIDUE HED A 170
A
HED
170
Software
5
A
LYS
83
A
LYS
82
6
1_555
A
VAL
87
A
VAL
86
6
1_555
A
THR
115
A
THR
114
6
1_555
A
LEU
118
A
LEU
117
6
1_555
A
ARG
119
A
ARG
118
6
1_555
A
GLN
122
A
GLN
121
6
1_555
A
ASN
68
A
ASN
68
5
5_555
A
VAL
71
A
VAL
71
5
5_555
A
ASP
72
A
ASP
72
5
5_555
A
ALA
93
A
ALA
92
5
1_555
A
HOH
173
D
HOH
5
1_555
154
P 32 2 1