data_239D # _entry.id 239D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 239D pdb_0000239d 10.2210/pdb239d/pdb RCSB ZDF049 ? ? WWPDB D_1000177629 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1996-11-08 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-04-18 5 'Structure model' 1 4 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' diffrn_detector 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_diffrn_detector.detector' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 239D _pdbx_database_status.recvd_initial_deposition_date 1995-11-02 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Karthe, P.' 1 'Krishnaswamy, S.' 2 'Gautham, N.' 3 # _citation.id primary _citation.title 'Polymorphism in Left Handed DNA: The Crystal Structure of d(CCCGGG)2' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year 1996 _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Karthe, P.' 1 ? primary 'Krishnaswamy, S.' 2 ? primary 'Gautham, N.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*CP*CP*GP*GP*G)-3') ; 1810.205 2 ? ? ? ? 2 water nat water 18.015 31 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DC)(DG)(DG)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CCCGGG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DC n 1 4 DG n 1 5 DG n 1 6 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DC 3 3 3 DC C A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DG 5 5 5 DG G A . n A 1 6 DG 6 6 6 DG G A . n B 1 1 DC 1 7 7 DC C B . n B 1 2 DC 2 8 8 DC C B . n B 1 3 DC 3 9 9 DC C B . n B 1 4 DG 4 10 10 DG G B . n B 1 5 DG 5 11 11 DG G B . n B 1 6 DG 6 12 12 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 13 13 HOH HOH A . C 2 HOH 2 15 15 HOH HOH A . C 2 HOH 3 16 16 HOH HOH A . C 2 HOH 4 17 17 HOH HOH A . C 2 HOH 5 18 18 HOH HOH A . C 2 HOH 6 22 22 HOH HOH A . C 2 HOH 7 23 23 HOH HOH A . C 2 HOH 8 25 25 HOH HOH A . C 2 HOH 9 26 26 HOH HOH A . C 2 HOH 10 28 28 HOH HOH A . C 2 HOH 11 29 29 HOH HOH A . C 2 HOH 12 30 30 HOH HOH A . C 2 HOH 13 31 31 HOH HOH A . C 2 HOH 14 32 32 HOH HOH A . C 2 HOH 15 33 33 HOH HOH A . C 2 HOH 16 35 35 HOH HOH A . C 2 HOH 17 36 36 HOH HOH A . C 2 HOH 18 43 43 HOH HOH A . D 2 HOH 1 14 14 HOH HOH B . D 2 HOH 2 19 19 HOH HOH B . D 2 HOH 3 20 20 HOH HOH B . D 2 HOH 4 21 21 HOH HOH B . D 2 HOH 5 24 24 HOH HOH B . D 2 HOH 6 27 27 HOH HOH B . D 2 HOH 7 34 34 HOH HOH B . D 2 HOH 8 37 37 HOH HOH B . D 2 HOH 9 38 38 HOH HOH B . D 2 HOH 10 39 39 HOH HOH B . D 2 HOH 11 40 40 HOH HOH B . D 2 HOH 12 41 41 HOH HOH B . D 2 HOH 13 42 42 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR refinement . ? 1 NUCLSQ refinement . ? 2 # _cell.entry_id 239D _cell.length_a 17.764 _cell.length_b 30.925 _cell.length_c 43.922 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 239D _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 239D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 26.18 _exptl_crystal.density_Matthews 1.67 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 296.00 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.98 _exptl_crystal_grow.pdbx_details 'pH 6.98, VAPOR DIFFUSION, HANGING DROP, temperature 296.00K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 BACL2 ? ? ? 1 3 1 SPERMINE ? ? ? 1 4 1 'NA CACODYLATE' ? ? ? 1 5 2 WATER ? ? ? 1 6 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector DIFFRACTOMETER _diffrn_detector.type 'ENRAF-NONIUS CAD4' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source ? _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 239D _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high ? _reflns.number_obs 1704 _reflns.number_all 1727 _reflns.percent_possible_obs 44.000 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 239D _refine.ls_number_reflns_obs 733 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.000 _refine.ls_d_res_high 2.050 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.2120000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2120000 _refine.ls_R_factor_R_free 0.3520000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 240 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 31 _refine_hist.number_atoms_total 271 _refine_hist.d_res_high 2.050 _refine_hist.d_res_low 8.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.030 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 5.70 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 239D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 239D _struct.title 'POLYMORPHISM IN LEFT HANDED DNA: THE CRYSTAL STRUCTURE OF D(CCCGGG)2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 239D _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'Z-DNA, DOUBLE HELIX, MISMATCHED, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 239D _struct_ref.pdbx_db_accession 239D _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 239D A 1 ? 6 ? 239D 1 ? 6 ? 1 6 2 1 239D B 1 ? 6 ? 239D 7 ? 12 ? 7 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 1 B DG 12 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog2 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 5 N1 ? ? A DC 2 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 5 O6 ? ? A DC 2 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 5 N2 ? ? A DC 2 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 5 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 2 O2 ? ? A DG 5 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 2 N4 ? ? A DG 5 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C5'" A DC 2 ? ? "C4'" A DC 2 ? ? 1.577 1.512 0.065 0.007 N 2 1 "C5'" A DG 5 ? ? "C4'" A DG 5 ? ? 1.592 1.512 0.080 0.007 N 3 1 P A DG 6 ? ? "O5'" A DG 6 ? ? 1.671 1.593 0.078 0.010 N 4 1 "C5'" A DG 6 ? ? "C4'" A DG 6 ? ? 1.611 1.512 0.099 0.007 N 5 1 "C5'" B DC 7 ? ? "C4'" B DC 7 ? ? 1.589 1.512 0.077 0.007 N 6 1 "C3'" B DC 7 ? ? "C2'" B DC 7 ? ? 1.598 1.518 0.080 0.012 N 7 1 "O3'" B DC 7 ? ? P B DC 8 ? ? 1.702 1.607 0.095 0.012 Y 8 1 "C5'" B DG 10 ? ? "C4'" B DG 10 ? ? 1.555 1.512 0.043 0.007 N 9 1 "C4'" B DG 11 ? ? "C3'" B DG 11 ? ? 1.451 1.521 -0.070 0.010 N 10 1 "C2'" B DG 11 ? ? "C1'" B DG 11 ? ? 1.457 1.518 -0.061 0.010 N 11 1 "O3'" B DG 11 ? ? "C3'" B DG 11 ? ? 1.382 1.419 -0.037 0.006 N 12 1 C6 B DG 12 ? ? N1 B DG 12 ? ? 1.330 1.391 -0.061 0.007 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C1'" A DC 1 ? ? "O4'" A DC 1 ? ? "C4'" A DC 1 ? ? 93.79 110.10 -16.31 1.00 N 2 1 N1 A DC 1 ? ? "C1'" A DC 1 ? ? "C2'" A DC 1 ? ? 129.00 114.30 14.70 1.40 N 3 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 112.77 108.30 4.47 0.30 N 4 1 N1 A DC 2 ? ? "C1'" A DC 2 ? ? "C2'" A DC 2 ? ? 125.62 114.30 11.32 1.40 N 5 1 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 126.58 118.90 7.68 0.60 N 6 1 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 114.04 121.90 -7.86 0.70 N 7 1 C2 A DC 2 ? ? N1 A DC 2 ? ? "C1'" A DC 2 ? ? 126.37 118.80 7.57 1.10 N 8 1 P A DC 3 ? ? "O5'" A DC 3 ? ? "C5'" A DC 3 ? ? 133.79 120.90 12.89 1.60 N 9 1 "O4'" A DC 3 ? ? "C4'" A DC 3 ? ? "C3'" A DC 3 ? ? 101.78 104.50 -2.72 0.40 N 10 1 N1 A DC 3 ? ? "C1'" A DC 3 ? ? "C2'" A DC 3 ? ? 125.06 114.30 10.76 1.40 N 11 1 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 114.47 108.30 6.17 0.30 N 12 1 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 122.60 118.90 3.70 0.60 N 13 1 "C3'" A DC 3 ? ? "O3'" A DC 3 ? ? P A DG 4 ? ? 127.77 119.70 8.07 1.20 Y 14 1 "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? 97.62 102.20 -4.58 0.70 N 15 1 N9 A DG 4 ? ? "C1'" A DG 4 ? ? "C2'" A DG 4 ? ? 125.35 114.30 11.05 1.40 N 16 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 116.11 108.30 7.81 0.30 N 17 1 C5 A DG 4 ? ? N7 A DG 4 ? ? C8 A DG 4 ? ? 101.11 104.30 -3.19 0.50 N 18 1 N7 A DG 4 ? ? C8 A DG 4 ? ? N9 A DG 4 ? ? 117.17 113.10 4.07 0.50 N 19 1 C8 A DG 4 ? ? N9 A DG 4 ? ? C4 A DG 4 ? ? 102.91 106.40 -3.49 0.40 N 20 1 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 113.39 108.30 5.09 0.30 N 21 1 "C3'" A DG 5 ? ? "O3'" A DG 5 ? ? P A DG 6 ? ? 134.58 119.70 14.88 1.20 Y 22 1 "C5'" B DC 7 ? ? "C4'" B DC 7 ? ? "O4'" B DC 7 ? ? 121.72 109.80 11.92 1.10 N 23 1 "C3'" B DC 7 ? ? "C2'" B DC 7 ? ? "C1'" B DC 7 ? ? 111.80 102.50 9.30 1.20 N 24 1 "O4'" B DC 7 ? ? "C1'" B DC 7 ? ? "C2'" B DC 7 ? ? 100.19 105.90 -5.71 0.80 N 25 1 N1 B DC 7 ? ? "C1'" B DC 7 ? ? "C2'" B DC 7 ? ? 135.41 114.30 21.11 1.40 N 26 1 "O4'" B DC 7 ? ? "C1'" B DC 7 ? ? N1 B DC 7 ? ? 99.47 108.00 -8.53 0.70 N 27 1 C6 B DC 7 ? ? N1 B DC 7 ? ? C2 B DC 7 ? ? 117.62 120.30 -2.68 0.40 N 28 1 C5 B DC 7 ? ? C6 B DC 7 ? ? N1 B DC 7 ? ? 124.51 121.00 3.51 0.50 N 29 1 N1 B DC 7 ? ? C2 B DC 7 ? ? O2 B DC 7 ? ? 127.07 118.90 8.17 0.60 N 30 1 N3 B DC 7 ? ? C2 B DC 7 ? ? O2 B DC 7 ? ? 115.68 121.90 -6.22 0.70 N 31 1 N3 B DC 7 ? ? C4 B DC 7 ? ? N4 B DC 7 ? ? 122.43 118.00 4.43 0.70 N 32 1 C5 B DC 7 ? ? C4 B DC 7 ? ? N4 B DC 7 ? ? 115.27 120.20 -4.93 0.70 N 33 1 C2 B DC 7 ? ? N1 B DC 7 ? ? "C1'" B DC 7 ? ? 125.93 118.80 7.13 1.10 N 34 1 "C1'" B DC 8 ? ? "O4'" B DC 8 ? ? "C4'" B DC 8 ? ? 104.05 110.10 -6.05 1.00 N 35 1 "C4'" B DC 8 ? ? "C3'" B DC 8 ? ? "C2'" B DC 8 ? ? 97.40 102.20 -4.80 0.70 N 36 1 "O4'" B DC 8 ? ? "C1'" B DC 8 ? ? N1 B DC 8 ? ? 112.49 108.30 4.19 0.30 N 37 1 N1 B DC 8 ? ? C2 B DC 8 ? ? O2 B DC 8 ? ? 124.56 118.90 5.66 0.60 N 38 1 N3 B DC 8 ? ? C2 B DC 8 ? ? O2 B DC 8 ? ? 116.13 121.90 -5.77 0.70 N 39 1 "O4'" B DC 9 ? ? "C4'" B DC 9 ? ? "C3'" B DC 9 ? ? 109.86 106.00 3.86 0.60 N 40 1 "C1'" B DC 9 ? ? "O4'" B DC 9 ? ? "C4'" B DC 9 ? ? 102.49 110.10 -7.61 1.00 N 41 1 "O4'" B DC 9 ? ? "C1'" B DC 9 ? ? N1 B DC 9 ? ? 115.21 108.30 6.91 0.30 N 42 1 N1 B DC 9 ? ? C2 B DC 9 ? ? O2 B DC 9 ? ? 125.19 118.90 6.29 0.60 N 43 1 N3 B DC 9 ? ? C2 B DC 9 ? ? O2 B DC 9 ? ? 114.01 121.90 -7.89 0.70 N 44 1 "O4'" B DG 10 ? ? "C1'" B DG 10 ? ? N9 B DG 10 ? ? 115.77 108.30 7.47 0.30 N 45 1 "O4'" B DG 11 ? ? "C4'" B DG 11 ? ? "C3'" B DG 11 ? ? 101.56 104.50 -2.94 0.40 N 46 1 "C5'" B DG 11 ? ? "C4'" B DG 11 ? ? "C3'" B DG 11 ? ? 97.62 114.10 -16.48 1.80 N 47 1 "C5'" B DG 11 ? ? "C4'" B DG 11 ? ? "O4'" B DG 11 ? ? 121.95 109.80 12.15 1.10 N 48 1 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? "C2'" B DG 11 ? ? 100.69 105.90 -5.21 0.80 N 49 1 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 114.13 108.30 5.83 0.30 N 50 1 "O3'" B DG 11 ? ? P B DG 12 ? ? "O5'" B DG 12 ? ? 91.38 104.00 -12.62 1.90 Y 51 1 "C1'" B DG 12 ? ? "O4'" B DG 12 ? ? "C4'" B DG 12 ? ? 103.86 110.10 -6.24 1.00 N 52 1 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? "C2'" B DG 12 ? ? 101.10 105.90 -4.80 0.80 N 53 1 N1 B DG 12 ? ? C2 B DG 12 ? ? N2 B DG 12 ? ? 110.58 116.20 -5.62 0.90 N 54 1 N3 B DG 12 ? ? C2 B DG 12 ? ? N2 B DG 12 ? ? 124.22 119.90 4.32 0.70 N # loop_ _refine_B_iso.class _refine_B_iso.details _refine_B_iso.treatment _refine_B_iso.pdbx_refine_id 'ALL ATOMS' TR isotropic 'X-RAY DIFFRACTION' 'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION' # loop_ _refine_occupancy.class _refine_occupancy.treatment _refine_occupancy.pdbx_refine_id 'ALL ATOMS' fix 'X-RAY DIFFRACTION' 'ALL WATERS' fix 'X-RAY DIFFRACTION' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DC OP3 O N N 1 DC P P N N 2 DC OP1 O N N 3 DC OP2 O N N 4 DC "O5'" O N N 5 DC "C5'" C N N 6 DC "C4'" C N R 7 DC "O4'" O N N 8 DC "C3'" C N S 9 DC "O3'" O N N 10 DC "C2'" C N N 11 DC "C1'" C N R 12 DC N1 N N N 13 DC C2 C N N 14 DC O2 O N N 15 DC N3 N N N 16 DC C4 C N N 17 DC N4 N N N 18 DC C5 C N N 19 DC C6 C N N 20 DC HOP3 H N N 21 DC HOP2 H N N 22 DC "H5'" H N N 23 DC "H5''" H N N 24 DC "H4'" H N N 25 DC "H3'" H N N 26 DC "HO3'" H N N 27 DC "H2'" H N N 28 DC "H2''" H N N 29 DC "H1'" H N N 30 DC H41 H N N 31 DC H42 H N N 32 DC H5 H N N 33 DC H6 H N N 34 DG OP3 O N N 35 DG P P N N 36 DG OP1 O N N 37 DG OP2 O N N 38 DG "O5'" O N N 39 DG "C5'" C N N 40 DG "C4'" C N R 41 DG "O4'" O N N 42 DG "C3'" C N S 43 DG "O3'" O N N 44 DG "C2'" C N N 45 DG "C1'" C N R 46 DG N9 N Y N 47 DG C8 C Y N 48 DG N7 N Y N 49 DG C5 C Y N 50 DG C6 C N N 51 DG O6 O N N 52 DG N1 N N N 53 DG C2 C N N 54 DG N2 N N N 55 DG N3 N N N 56 DG C4 C Y N 57 DG HOP3 H N N 58 DG HOP2 H N N 59 DG "H5'" H N N 60 DG "H5''" H N N 61 DG "H4'" H N N 62 DG "H3'" H N N 63 DG "HO3'" H N N 64 DG "H2'" H N N 65 DG "H2''" H N N 66 DG "H1'" H N N 67 DG H8 H N N 68 DG H1 H N N 69 DG H21 H N N 70 DG H22 H N N 71 HOH O O N N 72 HOH H1 H N N 73 HOH H2 H N N 74 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DC OP3 P sing N N 1 DC OP3 HOP3 sing N N 2 DC P OP1 doub N N 3 DC P OP2 sing N N 4 DC P "O5'" sing N N 5 DC OP2 HOP2 sing N N 6 DC "O5'" "C5'" sing N N 7 DC "C5'" "C4'" sing N N 8 DC "C5'" "H5'" sing N N 9 DC "C5'" "H5''" sing N N 10 DC "C4'" "O4'" sing N N 11 DC "C4'" "C3'" sing N N 12 DC "C4'" "H4'" sing N N 13 DC "O4'" "C1'" sing N N 14 DC "C3'" "O3'" sing N N 15 DC "C3'" "C2'" sing N N 16 DC "C3'" "H3'" sing N N 17 DC "O3'" "HO3'" sing N N 18 DC "C2'" "C1'" sing N N 19 DC "C2'" "H2'" sing N N 20 DC "C2'" "H2''" sing N N 21 DC "C1'" N1 sing N N 22 DC "C1'" "H1'" sing N N 23 DC N1 C2 sing N N 24 DC N1 C6 sing N N 25 DC C2 O2 doub N N 26 DC C2 N3 sing N N 27 DC N3 C4 doub N N 28 DC C4 N4 sing N N 29 DC C4 C5 sing N N 30 DC N4 H41 sing N N 31 DC N4 H42 sing N N 32 DC C5 C6 doub N N 33 DC C5 H5 sing N N 34 DC C6 H6 sing N N 35 DG OP3 P sing N N 36 DG OP3 HOP3 sing N N 37 DG P OP1 doub N N 38 DG P OP2 sing N N 39 DG P "O5'" sing N N 40 DG OP2 HOP2 sing N N 41 DG "O5'" "C5'" sing N N 42 DG "C5'" "C4'" sing N N 43 DG "C5'" "H5'" sing N N 44 DG "C5'" "H5''" sing N N 45 DG "C4'" "O4'" sing N N 46 DG "C4'" "C3'" sing N N 47 DG "C4'" "H4'" sing N N 48 DG "O4'" "C1'" sing N N 49 DG "C3'" "O3'" sing N N 50 DG "C3'" "C2'" sing N N 51 DG "C3'" "H3'" sing N N 52 DG "O3'" "HO3'" sing N N 53 DG "C2'" "C1'" sing N N 54 DG "C2'" "H2'" sing N N 55 DG "C2'" "H2''" sing N N 56 DG "C1'" N9 sing N N 57 DG "C1'" "H1'" sing N N 58 DG N9 C8 sing Y N 59 DG N9 C4 sing Y N 60 DG C8 N7 doub Y N 61 DG C8 H8 sing N N 62 DG N7 C5 sing Y N 63 DG C5 C6 sing N N 64 DG C5 C4 doub Y N 65 DG C6 O6 doub N N 66 DG C6 N1 sing N N 67 DG N1 C2 sing N N 68 DG N1 H1 sing N N 69 DG C2 N2 sing N N 70 DG C2 N3 doub N N 71 DG N2 H21 sing N N 72 DG N2 H22 sing N N 73 DG N3 C4 sing N N 74 HOH O H1 sing N N 75 HOH O H2 sing N N 76 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 239D 'double helix' 239D 'z-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 6 1_555 -1.123 3.004 -1.016 -8.557 15.414 -78.451 1 A_DC1:DG12_B A 1 ? B 12 ? ? ? 1 A DC 2 1_555 B DG 5 1_555 -1.445 -0.481 -0.383 1.955 -8.189 -2.861 2 A_DC2:DG11_B A 2 ? B 11 ? 19 1 1 A DC 3 1_555 B DG 4 1_555 -0.222 -0.219 -0.220 0.129 -9.328 3.361 3 A_DC3:DG10_B A 3 ? B 10 ? 19 1 1 A DG 4 1_555 B DC 3 1_555 1.326 -0.535 -0.262 -7.326 1.545 -1.089 4 A_DG4:DC9_B A 4 ? B 9 ? 19 1 1 A DG 5 1_555 B DC 2 1_555 0.410 -0.147 -0.984 -19.563 -6.615 0.781 5 A_DG5:DC8_B A 5 ? B 8 ? 19 1 1 A DG 6 1_555 B DC 1 1_555 -0.208 -0.254 0.054 6.313 -10.522 13.296 6 A_DG6:DC7_B A 6 ? B 7 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 2 1_555 B DG 5 1_555 A DC 3 1_555 B DG 4 1_555 0.501 -0.866 3.662 -2.717 -1.156 -28.213 2.066 0.320 3.655 2.363 -5.554 -28.364 1 AA_DC2DC3:DG10DG11_BB A 2 ? B 11 ? A 3 ? B 10 ? 1 A DC 3 1_555 B DG 4 1_555 A DG 4 1_555 B DC 3 1_555 -0.814 5.099 3.540 1.170 -3.320 -24.879 -10.560 -1.462 4.206 7.656 2.699 -25.123 2 AA_DC3DG4:DC9DG10_BB A 3 ? B 10 ? A 4 ? B 9 ? 1 A DG 4 1_555 B DC 3 1_555 A DG 5 1_555 B DC 2 1_555 0.452 0.614 3.899 3.101 -2.571 -36.842 -0.555 1.206 3.882 4.053 4.888 -37.054 3 AA_DG4DG5:DC8DC9_BB A 4 ? B 9 ? A 5 ? B 8 ? 1 A DG 5 1_555 B DC 2 1_555 A DG 6 1_555 B DC 1 1_555 2.309 3.348 2.779 -9.151 3.312 -4.377 -23.755 -3.474 2.082 -22.410 -61.912 -10.669 4 AA_DG5DG6:DC7DC8_BB A 5 ? B 8 ? A 6 ? B 7 ? # _atom_sites.entry_id 239D _atom_sites.fract_transf_matrix[1][1] 0.056294 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.032336 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022768 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DC A 1 1 ? 2.078 18.005 17.885 1.00 11.12 ? 1 DC A "O5'" 1 ATOM 2 C "C5'" . DC A 1 1 ? 1.966 16.650 18.311 1.00 12.61 ? 1 DC A "C5'" 1 ATOM 3 C "C4'" . DC A 1 1 ? 3.317 16.035 18.004 1.00 17.88 ? 1 DC A "C4'" 1 ATOM 4 O "O4'" . DC A 1 1 ? 4.384 16.665 18.724 1.00 21.73 ? 1 DC A "O4'" 1 ATOM 5 C "C3'" . DC A 1 1 ? 3.523 14.516 18.144 1.00 12.73 ? 1 DC A "C3'" 1 ATOM 6 O "O3'" . DC A 1 1 ? 2.917 13.839 17.077 1.00 22.34 ? 1 DC A "O3'" 1 ATOM 7 C "C2'" . DC A 1 1 ? 5.031 14.436 18.105 1.00 11.37 ? 1 DC A "C2'" 1 ATOM 8 C "C1'" . DC A 1 1 ? 5.398 15.954 18.030 1.00 13.32 ? 1 DC A "C1'" 1 ATOM 9 N N1 . DC A 1 1 ? 6.733 16.601 18.140 1.00 7.22 ? 1 DC A N1 1 ATOM 10 C C2 . DC A 1 1 ? 7.919 15.880 18.149 1.00 7.09 ? 1 DC A C2 1 ATOM 11 O O2 . DC A 1 1 ? 7.935 14.662 18.087 1.00 5.55 ? 1 DC A O2 1 ATOM 12 N N3 . DC A 1 1 ? 9.095 16.548 18.236 1.00 7.44 ? 1 DC A N3 1 ATOM 13 C C4 . DC A 1 1 ? 9.115 17.884 18.298 1.00 11.89 ? 1 DC A C4 1 ATOM 14 N N4 . DC A 1 1 ? 10.278 18.546 18.386 1.00 13.99 ? 1 DC A N4 1 ATOM 15 C C5 . DC A 1 1 ? 7.891 18.635 18.285 1.00 15.72 ? 1 DC A C5 1 ATOM 16 C C6 . DC A 1 1 ? 6.740 17.952 18.197 1.00 3.65 ? 1 DC A C6 1 ATOM 17 P P . DC A 1 2 ? 2.022 12.518 17.279 1.00 33.02 ? 2 DC A P 1 ATOM 18 O OP1 . DC A 1 2 ? 2.569 11.810 18.438 1.00 26.58 ? 2 DC A OP1 1 ATOM 19 O OP2 . DC A 1 2 ? 1.954 11.820 15.974 1.00 34.19 ? 2 DC A OP2 1 ATOM 20 O "O5'" . DC A 1 2 ? 0.547 13.060 17.705 1.00 21.58 ? 2 DC A "O5'" 1 ATOM 21 C "C5'" . DC A 1 2 ? -0.217 13.944 16.875 1.00 19.19 ? 2 DC A "C5'" 1 ATOM 22 C "C4'" . DC A 1 2 ? -1.430 13.434 16.005 1.00 27.81 ? 2 DC A "C4'" 1 ATOM 23 O "O4'" . DC A 1 2 ? -1.942 14.569 15.237 1.00 11.24 ? 2 DC A "O4'" 1 ATOM 24 C "C3'" . DC A 1 2 ? -1.075 12.389 14.947 1.00 31.13 ? 2 DC A "C3'" 1 ATOM 25 O "O3'" . DC A 1 2 ? -2.093 11.411 14.652 1.00 41.26 ? 2 DC A "O3'" 1 ATOM 26 C "C2'" . DC A 1 2 ? -0.789 13.261 13.756 1.00 18.70 ? 2 DC A "C2'" 1 ATOM 27 C "C1'" . DC A 1 2 ? -1.123 14.692 14.117 1.00 10.35 ? 2 DC A "C1'" 1 ATOM 28 N N1 . DC A 1 2 ? -0.117 15.803 14.345 1.00 8.74 ? 2 DC A N1 1 ATOM 29 C C2 . DC A 1 2 ? 1.275 15.654 14.472 1.00 2.12 ? 2 DC A C2 1 ATOM 30 O O2 . DC A 1 2 ? 1.904 14.612 14.398 1.00 10.84 ? 2 DC A O2 1 ATOM 31 N N3 . DC A 1 2 ? 2.046 16.752 14.670 1.00 7.92 ? 2 DC A N3 1 ATOM 32 C C4 . DC A 1 2 ? 1.513 17.952 14.758 1.00 9.31 ? 2 DC A C4 1 ATOM 33 N N4 . DC A 1 2 ? 2.354 18.945 14.955 1.00 24.06 ? 2 DC A N4 1 ATOM 34 C C5 . DC A 1 2 ? 0.110 18.162 14.639 1.00 2.00 ? 2 DC A C5 1 ATOM 35 C C6 . DC A 1 2 ? -0.664 17.074 14.446 1.00 10.32 ? 2 DC A C6 1 ATOM 36 P P . DC A 1 3 ? -1.583 9.884 14.433 1.00 49.29 ? 3 DC A P 1 ATOM 37 O OP1 . DC A 1 3 ? -2.739 8.978 14.341 1.00 42.41 ? 3 DC A OP1 1 ATOM 38 O OP2 . DC A 1 3 ? -0.531 9.624 15.443 1.00 50.59 ? 3 DC A OP2 1 ATOM 39 O "O5'" . DC A 1 3 ? -0.815 9.757 13.036 1.00 45.82 ? 3 DC A "O5'" 1 ATOM 40 C "C5'" . DC A 1 3 ? -1.252 9.627 11.657 1.00 25.69 ? 3 DC A "C5'" 1 ATOM 41 C "C4'" . DC A 1 3 ? -0.124 10.171 10.783 1.00 18.89 ? 3 DC A "C4'" 1 ATOM 42 O "O4'" . DC A 1 3 ? 0.050 11.581 10.884 1.00 10.69 ? 3 DC A "O4'" 1 ATOM 43 C "C3'" . DC A 1 3 ? 1.206 9.652 11.332 1.00 20.93 ? 3 DC A "C3'" 1 ATOM 44 O "O3'" . DC A 1 3 ? 1.405 8.316 10.875 1.00 15.94 ? 3 DC A "O3'" 1 ATOM 45 C "C2'" . DC A 1 3 ? 2.260 10.703 11.068 1.00 8.73 ? 3 DC A "C2'" 1 ATOM 46 C "C1'" . DC A 1 3 ? 1.457 11.869 10.642 1.00 2.00 ? 3 DC A "C1'" 1 ATOM 47 N N1 . DC A 1 3 ? 1.846 13.316 10.853 1.00 3.21 ? 3 DC A N1 1 ATOM 48 C C2 . DC A 1 3 ? 3.171 13.755 10.888 1.00 16.25 ? 3 DC A C2 1 ATOM 49 O O2 . DC A 1 3 ? 4.127 12.988 10.774 1.00 16.32 ? 3 DC A O2 1 ATOM 50 N N3 . DC A 1 3 ? 3.404 15.107 11.055 1.00 2.00 ? 3 DC A N3 1 ATOM 51 C C4 . DC A 1 3 ? 2.396 15.976 11.178 1.00 7.20 ? 3 DC A C4 1 ATOM 52 N N4 . DC A 1 3 ? 2.679 17.250 11.345 1.00 5.84 ? 3 DC A N4 1 ATOM 53 C C5 . DC A 1 3 ? 1.043 15.565 11.130 1.00 2.00 ? 3 DC A C5 1 ATOM 54 C C6 . DC A 1 3 ? 0.830 14.244 10.967 1.00 5.58 ? 3 DC A C6 1 ATOM 55 P P . DG A 1 4 ? 2.729 7.422 11.002 1.00 27.23 ? 4 DG A P 1 ATOM 56 O OP1 . DG A 1 4 ? 2.997 7.153 12.430 1.00 27.58 ? 4 DG A OP1 1 ATOM 57 O OP2 . DG A 1 4 ? 3.786 7.994 10.133 1.00 23.18 ? 4 DG A OP2 1 ATOM 58 O "O5'" . DG A 1 4 ? 2.276 5.996 10.335 1.00 37.82 ? 4 DG A "O5'" 1 ATOM 59 C "C5'" . DG A 1 4 ? 2.247 5.746 8.894 1.00 36.88 ? 4 DG A "C5'" 1 ATOM 60 C "C4'" . DG A 1 4 ? 0.888 5.870 8.183 1.00 27.49 ? 4 DG A "C4'" 1 ATOM 61 O "O4'" . DG A 1 4 ? 0.265 7.159 8.389 1.00 20.99 ? 4 DG A "O4'" 1 ATOM 62 C "C3'" . DG A 1 4 ? 1.181 5.771 6.694 1.00 27.99 ? 4 DG A "C3'" 1 ATOM 63 O "O3'" . DG A 1 4 ? 0.092 5.236 5.872 1.00 28.08 ? 4 DG A "O3'" 1 ATOM 64 C "C2'" . DG A 1 4 ? 1.402 7.243 6.435 1.00 18.00 ? 4 DG A "C2'" 1 ATOM 65 C "C1'" . DG A 1 4 ? 0.261 7.855 7.137 1.00 19.66 ? 4 DG A "C1'" 1 ATOM 66 N N9 . DG A 1 4 ? -0.030 9.312 7.199 1.00 6.07 ? 4 DG A N9 1 ATOM 67 C C8 . DG A 1 4 ? -1.307 9.834 7.252 1.00 19.90 ? 4 DG A C8 1 ATOM 68 N N7 . DG A 1 4 ? -1.418 11.136 7.322 1.00 8.96 ? 4 DG A N7 1 ATOM 69 C C5 . DG A 1 4 ? -0.094 11.516 7.317 1.00 2.00 ? 4 DG A C5 1 ATOM 70 C C6 . DG A 1 4 ? 0.403 12.797 7.361 1.00 2.00 ? 4 DG A C6 1 ATOM 71 O O6 . DG A 1 4 ? -0.265 13.842 7.414 1.00 7.57 ? 4 DG A O6 1 ATOM 72 N N1 . DG A 1 4 ? 1.794 12.809 7.335 1.00 2.00 ? 4 DG A N1 1 ATOM 73 C C2 . DG A 1 4 ? 2.594 11.690 7.269 1.00 11.24 ? 4 DG A C2 1 ATOM 74 N N2 . DG A 1 4 ? 3.896 11.857 7.256 1.00 2.00 ? 4 DG A N2 1 ATOM 75 N N3 . DG A 1 4 ? 2.117 10.462 7.212 1.00 11.06 ? 4 DG A N3 1 ATOM 76 C C4 . DG A 1 4 ? 0.767 10.440 7.247 1.00 7.21 ? 4 DG A C4 1 ATOM 77 P P . DG A 1 5 ? 0.387 4.472 4.445 1.00 26.92 ? 5 DG A P 1 ATOM 78 O OP1 . DG A 1 5 ? -0.863 4.574 3.663 1.00 11.23 ? 5 DG A OP1 1 ATOM 79 O OP2 . DG A 1 5 ? 0.984 3.148 4.656 1.00 12.81 ? 5 DG A OP2 1 ATOM 80 O "O5'" . DG A 1 5 ? 1.570 5.381 3.755 1.00 20.59 ? 5 DG A "O5'" 1 ATOM 81 C "C5'" . DG A 1 5 ? 2.961 4.933 3.637 1.00 20.53 ? 5 DG A "C5'" 1 ATOM 82 C "C4'" . DG A 1 5 ? 4.127 5.993 3.408 1.00 19.62 ? 5 DG A "C4'" 1 ATOM 83 O "O4'" . DG A 1 5 ? 3.693 7.172 2.732 1.00 13.48 ? 5 DG A "O4'" 1 ATOM 84 C "C3'" . DG A 1 5 ? 4.974 6.485 4.603 1.00 25.76 ? 5 DG A "C3'" 1 ATOM 85 O "O3'" . DG A 1 5 ? 6.342 6.432 4.142 1.00 36.62 ? 5 DG A "O3'" 1 ATOM 86 C "C2'" . DG A 1 5 ? 4.425 7.870 4.915 1.00 26.15 ? 5 DG A "C2'" 1 ATOM 87 C "C1'" . DG A 1 5 ? 3.876 8.344 3.593 1.00 27.03 ? 5 DG A "C1'" 1 ATOM 88 N N9 . DG A 1 5 ? 2.652 9.206 3.694 1.00 20.85 ? 5 DG A N9 1 ATOM 89 C C8 . DG A 1 5 ? 1.338 8.845 3.782 1.00 23.61 ? 5 DG A C8 1 ATOM 90 N N7 . DG A 1 5 ? 0.481 9.825 3.865 1.00 16.06 ? 5 DG A N7 1 ATOM 91 C C5 . DG A 1 5 ? 1.300 10.941 3.795 1.00 16.00 ? 5 DG A C5 1 ATOM 92 C C6 . DG A 1 5 ? 0.941 12.308 3.826 1.00 13.96 ? 5 DG A C6 1 ATOM 93 O O6 . DG A 1 5 ? -0.181 12.787 3.905 1.00 12.09 ? 5 DG A O6 1 ATOM 94 N N1 . DG A 1 5 ? 2.054 13.121 3.751 1.00 11.67 ? 5 DG A N1 1 ATOM 95 C C2 . DG A 1 5 ? 3.354 12.648 3.650 1.00 20.29 ? 5 DG A C2 1 ATOM 96 N N2 . DG A 1 5 ? 4.318 13.533 3.580 1.00 19.75 ? 5 DG A N2 1 ATOM 97 N N3 . DG A 1 5 ? 3.709 11.374 3.615 1.00 17.27 ? 5 DG A N3 1 ATOM 98 C C4 . DG A 1 5 ? 2.626 10.573 3.694 1.00 22.10 ? 5 DG A C4 1 ATOM 99 P P . DG A 1 6 ? 7.651 7.434 4.274 1.00 42.77 ? 6 DG A P 1 ATOM 100 O OP1 . DG A 1 6 ? 8.321 7.178 5.578 1.00 42.27 ? 6 DG A OP1 1 ATOM 101 O OP2 . DG A 1 6 ? 7.299 8.845 3.918 1.00 34.90 ? 6 DG A OP2 1 ATOM 102 O "O5'" . DG A 1 6 ? 8.550 6.717 3.061 1.00 32.94 ? 6 DG A "O5'" 1 ATOM 103 C "C5'" . DG A 1 6 ? 8.232 6.618 1.612 1.00 38.88 ? 6 DG A "C5'" 1 ATOM 104 C "C4'" . DG A 1 6 ? 7.663 5.229 1.028 1.00 31.60 ? 6 DG A "C4'" 1 ATOM 105 O "O4'" . DG A 1 6 ? 6.203 5.096 1.076 1.00 32.96 ? 6 DG A "O4'" 1 ATOM 106 C "C3'" . DG A 1 6 ? 7.965 5.001 -0.461 1.00 22.88 ? 6 DG A "C3'" 1 ATOM 107 O "O3'" . DG A 1 6 ? 7.766 3.640 -0.896 1.00 4.34 ? 6 DG A "O3'" 1 ATOM 108 C "C2'" . DG A 1 6 ? 6.834 5.768 -1.054 1.00 27.47 ? 6 DG A "C2'" 1 ATOM 109 C "C1'" . DG A 1 6 ? 5.649 5.322 -0.228 1.00 18.44 ? 6 DG A "C1'" 1 ATOM 110 N N9 . DG A 1 6 ? 4.551 6.293 -0.119 1.00 21.10 ? 6 DG A N9 1 ATOM 111 C C8 . DG A 1 6 ? 3.235 5.975 -0.075 1.00 11.31 ? 6 DG A C8 1 ATOM 112 N N7 . DG A 1 6 ? 2.446 6.998 0.035 1.00 19.07 ? 6 DG A N7 1 ATOM 113 C C5 . DG A 1 6 ? 3.315 8.084 0.057 1.00 8.21 ? 6 DG A C5 1 ATOM 114 C C6 . DG A 1 6 ? 3.029 9.457 0.167 1.00 2.00 ? 6 DG A C6 1 ATOM 115 O O6 . DG A 1 6 ? 1.934 9.995 0.268 1.00 2.00 ? 6 DG A O6 1 ATOM 116 N N1 . DG A 1 6 ? 4.159 10.227 0.154 1.00 2.00 ? 6 DG A N1 1 ATOM 117 C C2 . DG A 1 6 ? 5.423 9.732 0.061 1.00 7.52 ? 6 DG A C2 1 ATOM 118 N N2 . DG A 1 6 ? 6.386 10.626 0.070 1.00 10.77 ? 6 DG A N2 1 ATOM 119 N N3 . DG A 1 6 ? 5.718 8.443 -0.035 1.00 9.33 ? 6 DG A N3 1 ATOM 120 C C4 . DG A 1 6 ? 4.612 7.672 -0.031 1.00 7.20 ? 6 DG A C4 1 ATOM 121 O "O5'" . DC B 1 1 ? 1.647 19.910 -0.435 1.00 22.41 ? 7 DC B "O5'" 1 ATOM 122 C "C5'" . DC B 1 1 ? 2.562 18.784 -0.663 1.00 17.97 ? 7 DC B "C5'" 1 ATOM 123 C "C4'" . DC B 1 1 ? 3.851 18.728 0.264 1.00 12.96 ? 7 DC B "C4'" 1 ATOM 124 O "O4'" . DC B 1 1 ? 4.203 17.510 1.041 1.00 10.10 ? 7 DC B "O4'" 1 ATOM 125 C "C3'" . DC B 1 1 ? 5.008 19.090 -0.615 1.00 14.44 ? 7 DC B "C3'" 1 ATOM 126 O "O3'" . DC B 1 1 ? 5.624 20.383 -0.184 1.00 9.49 ? 7 DC B "O3'" 1 ATOM 127 C "C2'" . DC B 1 1 ? 5.747 17.674 -0.663 1.00 14.41 ? 7 DC B "C2'" 1 ATOM 128 C "C1'" . DC B 1 1 ? 5.104 16.647 0.334 1.00 12.71 ? 7 DC B "C1'" 1 ATOM 129 N N1 . DC B 1 1 ? 4.199 15.388 0.198 1.00 22.68 ? 7 DC B N1 1 ATOM 130 C C2 . DC B 1 1 ? 4.631 14.024 0.312 1.00 19.11 ? 7 DC B C2 1 ATOM 131 O O2 . DC B 1 1 ? 5.782 13.622 0.483 1.00 10.88 ? 7 DC B O2 1 ATOM 132 N N3 . DC B 1 1 ? 3.677 13.057 0.211 1.00 21.21 ? 7 DC B N3 1 ATOM 133 C C4 . DC B 1 1 ? 2.396 13.344 0.013 1.00 23.34 ? 7 DC B C4 1 ATOM 134 N N4 . DC B 1 1 ? 1.482 12.423 -0.088 1.00 13.58 ? 7 DC B N4 1 ATOM 135 C C5 . DC B 1 1 ? 1.934 14.655 -0.092 1.00 26.49 ? 7 DC B C5 1 ATOM 136 C C6 . DC B 1 1 ? 2.862 15.617 0.013 1.00 29.66 ? 7 DC B C6 1 ATOM 137 P P . DC B 1 2 ? 4.736 21.771 0.242 1.00 15.23 ? 8 DC B P 1 ATOM 138 O OP1 . DC B 1 2 ? 3.453 21.818 -0.470 1.00 15.64 ? 8 DC B OP1 1 ATOM 139 O OP2 . DC B 1 2 ? 5.599 22.980 0.206 1.00 10.71 ? 8 DC B OP2 1 ATOM 140 O "O5'" . DC B 1 2 ? 4.260 21.502 1.722 1.00 29.28 ? 8 DC B "O5'" 1 ATOM 141 C "C5'" . DC B 1 2 ? 5.017 21.657 2.925 1.00 34.09 ? 8 DC B "C5'" 1 ATOM 142 C "C4'" . DC B 1 2 ? 4.732 20.590 3.997 1.00 31.68 ? 8 DC B "C4'" 1 ATOM 143 O "O4'" . DC B 1 2 ? 3.334 20.188 4.067 1.00 32.95 ? 8 DC B "O4'" 1 ATOM 144 C "C3'" . DC B 1 2 ? 5.571 19.316 3.821 1.00 33.39 ? 8 DC B "C3'" 1 ATOM 145 O "O3'" . DC B 1 2 ? 6.940 19.446 4.265 1.00 37.82 ? 8 DC B "O3'" 1 ATOM 146 C "C2'" . DC B 1 2 ? 4.810 18.453 4.766 1.00 29.52 ? 8 DC B "C2'" 1 ATOM 147 C "C1'" . DC B 1 2 ? 3.365 18.951 4.770 1.00 28.95 ? 8 DC B "C1'" 1 ATOM 148 N N1 . DC B 1 2 ? 2.231 18.057 4.401 1.00 19.72 ? 8 DC B N1 1 ATOM 149 C C2 . DC B 1 2 ? 2.414 16.752 3.935 1.00 16.76 ? 8 DC B C2 1 ATOM 150 O O2 . DC B 1 2 ? 3.501 16.214 3.790 1.00 9.41 ? 8 DC B O2 1 ATOM 151 N N3 . DC B 1 2 ? 1.336 16.004 3.628 1.00 10.12 ? 8 DC B N3 1 ATOM 152 C C4 . DC B 1 2 ? 0.121 16.508 3.751 1.00 14.19 ? 8 DC B C4 1 ATOM 153 N N4 . DC B 1 2 ? -0.883 15.716 3.426 1.00 16.18 ? 8 DC B N4 1 ATOM 154 C C5 . DC B 1 2 ? -0.112 17.831 4.212 1.00 13.71 ? 8 DC B C5 1 ATOM 155 C C6 . DC B 1 2 ? 0.977 18.561 4.528 1.00 18.69 ? 8 DC B C6 1 ATOM 156 P P . DC B 1 3 ? 8.067 18.329 3.927 1.00 42.49 ? 9 DC B P 1 ATOM 157 O OP1 . DC B 1 3 ? 8.990 18.867 2.899 1.00 38.46 ? 9 DC B OP1 1 ATOM 158 O OP2 . DC B 1 3 ? 7.400 17.027 3.698 1.00 38.10 ? 9 DC B OP2 1 ATOM 159 O "O5'" . DC B 1 3 ? 8.919 18.292 5.310 1.00 36.73 ? 9 DC B "O5'" 1 ATOM 160 C "C5'" . DC B 1 3 ? 8.527 18.676 6.645 1.00 18.16 ? 9 DC B "C5'" 1 ATOM 161 C "C4'" . DC B 1 3 ? 7.617 17.714 7.375 1.00 18.13 ? 9 DC B "C4'" 1 ATOM 162 O "O4'" . DC B 1 3 ? 6.240 18.076 7.366 1.00 10.21 ? 9 DC B "O4'" 1 ATOM 163 C "C3'" . DC B 1 3 ? 7.775 16.248 6.935 1.00 10.27 ? 9 DC B "C3'" 1 ATOM 164 O "O3'" . DC B 1 3 ? 8.616 15.394 7.735 1.00 15.98 ? 9 DC B "O3'" 1 ATOM 165 C "C2'" . DC B 1 3 ? 6.370 15.793 7.054 1.00 7.48 ? 9 DC B "C2'" 1 ATOM 166 C "C1'" . DC B 1 3 ? 5.605 16.882 7.809 1.00 13.56 ? 9 DC B "C1'" 1 ATOM 167 N N1 . DC B 1 3 ? 4.084 16.897 7.752 1.00 17.54 ? 9 DC B N1 1 ATOM 168 C C2 . DC B 1 3 ? 3.352 15.725 7.533 1.00 16.16 ? 9 DC B C2 1 ATOM 169 O O2 . DC B 1 3 ? 3.832 14.618 7.370 1.00 22.33 ? 9 DC B O2 1 ATOM 170 N N3 . DC B 1 3 ? 2.011 15.750 7.493 1.00 17.49 ? 9 DC B N3 1 ATOM 171 C C4 . DC B 1 3 ? 1.347 16.873 7.651 1.00 12.79 ? 9 DC B C4 1 ATOM 172 N N4 . DC B 1 3 ? 0.028 16.774 7.590 1.00 8.60 ? 9 DC B N4 1 ATOM 173 C C5 . DC B 1 3 ? 2.041 18.113 7.888 1.00 15.14 ? 9 DC B C5 1 ATOM 174 C C6 . DC B 1 3 ? 3.400 18.073 7.937 1.00 16.45 ? 9 DC B C6 1 ATOM 175 P P . DG B 1 4 ? 9.784 14.389 7.181 1.00 38.39 ? 10 DG B P 1 ATOM 176 O OP1 . DG B 1 4 ? 9.601 14.182 5.727 1.00 40.89 ? 10 DG B OP1 1 ATOM 177 O OP2 . DG B 1 4 ? 9.784 13.171 8.033 1.00 39.86 ? 10 DG B OP2 1 ATOM 178 O "O5'" . DG B 1 4 ? 11.197 15.206 7.348 1.00 22.88 ? 10 DG B "O5'" 1 ATOM 179 C "C5'" . DG B 1 4 ? 11.291 16.205 8.367 1.00 36.48 ? 10 DG B "C5'" 1 ATOM 180 C "C4'" . DG B 1 4 ? 12.389 16.044 9.456 1.00 37.70 ? 10 DG B "C4'" 1 ATOM 181 O "O4'" . DG B 1 4 ? 12.225 17.145 10.383 1.00 42.62 ? 10 DG B "O4'" 1 ATOM 182 C "C3'" . DG B 1 4 ? 12.287 14.779 10.295 1.00 35.61 ? 10 DG B "C3'" 1 ATOM 183 O "O3'" . DG B 1 4 ? 13.547 14.188 10.730 1.00 37.79 ? 10 DG B "O3'" 1 ATOM 184 C "C2'" . DG B 1 4 ? 11.440 15.212 11.459 1.00 35.05 ? 10 DG B "C2'" 1 ATOM 185 C "C1'" . DG B 1 4 ? 11.284 16.712 11.371 1.00 35.51 ? 10 DG B "C1'" 1 ATOM 186 N N9 . DG B 1 4 ? 9.898 17.296 11.257 1.00 27.75 ? 10 DG B N9 1 ATOM 187 C C8 . DG B 1 4 ? 9.584 18.638 11.209 1.00 33.91 ? 10 DG B C8 1 ATOM 188 N N7 . DG B 1 4 ? 8.290 18.895 11.117 1.00 35.83 ? 10 DG B N7 1 ATOM 189 C C5 . DG B 1 4 ? 7.686 17.624 11.103 1.00 22.73 ? 10 DG B C5 1 ATOM 190 C C6 . DG B 1 4 ? 6.296 17.250 11.020 1.00 18.06 ? 10 DG B C6 1 ATOM 191 O O6 . DG B 1 4 ? 5.269 17.930 10.932 1.00 8.75 ? 10 DG B O6 1 ATOM 192 N N1 . DG B 1 4 ? 6.159 15.899 11.042 1.00 3.25 ? 10 DG B N1 1 ATOM 193 C C2 . DG B 1 4 ? 7.187 15.008 11.125 1.00 5.46 ? 10 DG B C2 1 ATOM 194 N N2 . DG B 1 4 ? 6.866 13.731 11.130 1.00 12.27 ? 10 DG B N2 1 ATOM 195 N N3 . DG B 1 4 ? 8.465 15.314 11.209 1.00 5.87 ? 10 DG B N3 1 ATOM 196 C C4 . DG B 1 4 ? 8.660 16.644 11.187 1.00 23.77 ? 10 DG B C4 1 ATOM 197 P P . DG B 1 5 ? 13.604 12.552 11.007 1.00 32.54 ? 11 DG B P 1 ATOM 198 O OP1 . DG B 1 5 ? 14.989 12.073 10.739 1.00 21.21 ? 11 DG B OP1 1 ATOM 199 O OP2 . DG B 1 5 ? 12.474 11.897 10.282 1.00 18.52 ? 11 DG B OP2 1 ATOM 200 O "O5'" . DG B 1 5 ? 13.250 12.503 12.610 1.00 34.25 ? 11 DG B "O5'" 1 ATOM 201 C "C5'" . DG B 1 5 ? 12.138 11.690 13.054 1.00 15.44 ? 11 DG B "C5'" 1 ATOM 202 C "C4'" . DG B 1 5 ? 11.385 11.999 14.341 1.00 10.44 ? 11 DG B "C4'" 1 ATOM 203 O "O4'" . DG B 1 5 ? 10.696 13.282 14.551 1.00 18.17 ? 11 DG B "O4'" 1 ATOM 204 C "C3'" . DG B 1 5 ? 10.266 11.099 14.130 1.00 9.36 ? 11 DG B "C3'" 1 ATOM 205 O "O3'" . DG B 1 5 ? 10.323 10.292 15.250 1.00 27.17 ? 11 DG B "O3'" 1 ATOM 206 C "C2'" . DG B 1 5 ? 9.005 11.949 13.989 1.00 4.14 ? 11 DG B "C2'" 1 ATOM 207 C "C1'" . DG B 1 5 ? 9.319 13.057 14.881 1.00 6.53 ? 11 DG B "C1'" 1 ATOM 208 N N9 . DG B 1 5 ? 8.459 14.281 14.789 1.00 17.41 ? 11 DG B N9 1 ATOM 209 C C8 . DG B 1 5 ? 8.886 15.583 14.780 1.00 10.53 ? 11 DG B C8 1 ATOM 210 N N7 . DG B 1 5 ? 7.921 16.455 14.692 1.00 9.69 ? 11 DG B N7 1 ATOM 211 C C5 . DG B 1 5 ? 6.747 15.707 14.644 1.00 3.29 ? 11 DG B C5 1 ATOM 212 C C6 . DG B 1 5 ? 5.370 16.130 14.547 1.00 6.26 ? 11 DG B C6 1 ATOM 213 O O6 . DG B 1 5 ? 4.926 17.290 14.494 1.00 4.42 ? 11 DG B O6 1 ATOM 214 N N1 . DG B 1 5 ? 4.494 15.020 14.521 1.00 11.59 ? 11 DG B N1 1 ATOM 215 C C2 . DG B 1 5 ? 4.903 13.675 14.582 1.00 14.51 ? 11 DG B C2 1 ATOM 216 N N2 . DG B 1 5 ? 3.990 12.719 14.547 1.00 4.26 ? 11 DG B N2 1 ATOM 217 N N3 . DG B 1 5 ? 6.184 13.301 14.679 1.00 8.05 ? 11 DG B N3 1 ATOM 218 C C4 . DG B 1 5 ? 7.056 14.358 14.705 1.00 15.36 ? 11 DG B C4 1 ATOM 219 P P . DG B 1 6 ? 9.374 9.030 15.469 1.00 45.72 ? 12 DG B P 1 ATOM 220 O OP1 . DG B 1 6 ? 9.967 7.790 14.933 1.00 41.17 ? 12 DG B OP1 1 ATOM 221 O OP2 . DG B 1 6 ? 7.978 9.386 15.131 1.00 40.47 ? 12 DG B OP2 1 ATOM 222 O "O5'" . DG B 1 6 ? 9.600 9.089 17.072 1.00 48.59 ? 12 DG B "O5'" 1 ATOM 223 C "C5'" . DG B 1 6 ? 10.836 8.841 17.780 1.00 45.25 ? 12 DG B "C5'" 1 ATOM 224 C "C4'" . DG B 1 6 ? 11.953 9.902 17.635 1.00 42.30 ? 12 DG B "C4'" 1 ATOM 225 O "O4'" . DG B 1 6 ? 11.532 11.247 17.885 1.00 45.86 ? 12 DG B "O4'" 1 ATOM 226 C "C3'" . DG B 1 6 ? 13.145 9.673 18.579 1.00 39.26 ? 12 DG B "C3'" 1 ATOM 227 O "O3'" . DG B 1 6 ? 14.261 9.089 17.898 1.00 34.91 ? 12 DG B "O3'" 1 ATOM 228 C "C2'" . DG B 1 6 ? 13.478 11.074 19.093 1.00 45.95 ? 12 DG B "C2'" 1 ATOM 229 C "C1'" . DG B 1 6 ? 12.779 11.971 18.087 1.00 46.71 ? 12 DG B "C1'" 1 ATOM 230 N N9 . DG B 1 6 ? 12.444 13.341 18.535 1.00 43.65 ? 12 DG B N9 1 ATOM 231 C C8 . DG B 1 6 ? 11.184 13.737 18.865 1.00 42.86 ? 12 DG B C8 1 ATOM 232 N N7 . DG B 1 6 ? 11.097 14.980 19.220 1.00 44.46 ? 12 DG B N7 1 ATOM 233 C C5 . DG B 1 6 ? 12.401 15.456 19.115 1.00 42.89 ? 12 DG B C5 1 ATOM 234 C C6 . DG B 1 6 ? 12.900 16.758 19.383 1.00 40.44 ? 12 DG B C6 1 ATOM 235 O O6 . DG B 1 6 ? 12.303 17.763 19.761 1.00 48.31 ? 12 DG B O6 1 ATOM 236 N N1 . DG B 1 6 ? 14.209 16.842 19.163 1.00 34.98 ? 12 DG B N1 1 ATOM 237 C C2 . DG B 1 6 ? 14.991 15.837 18.746 1.00 33.67 ? 12 DG B C2 1 ATOM 238 N N2 . DG B 1 6 ? 16.240 16.239 18.632 1.00 33.32 ? 12 DG B N2 1 ATOM 239 N N3 . DG B 1 6 ? 14.570 14.584 18.478 1.00 31.00 ? 12 DG B N3 1 ATOM 240 C C4 . DG B 1 6 ? 13.245 14.464 18.689 1.00 38.36 ? 12 DG B C4 1 HETATM 241 O O . HOH C 2 . ? -3.905 11.770 7.972 1.00 2.00 ? 13 HOH A O 1 HETATM 242 O O . HOH C 2 . ? -2.652 14.726 7.006 1.00 5.20 ? 15 HOH A O 1 HETATM 243 O O . HOH C 2 . ? 1.943 9.349 16.809 1.00 9.10 ? 16 HOH A O 1 HETATM 244 O O . HOH C 2 . ? -1.052 7.023 3.430 1.00 10.35 ? 17 HOH A O 1 HETATM 245 O O . HOH C 2 . ? 5.500 3.516 5.319 1.00 2.00 ? 18 HOH A O 1 HETATM 246 O O . HOH C 2 . ? 3.466 3.383 -1.585 1.00 11.35 ? 22 HOH A O 1 HETATM 247 O O . HOH C 2 . ? 6.059 12.277 6.206 1.00 9.30 ? 23 HOH A O 1 HETATM 248 O O . HOH C 2 . ? -0.027 6.525 13.857 1.00 9.03 ? 25 HOH A O 1 HETATM 249 O O . HOH C 2 . ? -5.260 8.514 14.868 1.00 2.00 ? 26 HOH A O 1 HETATM 250 O O . HOH C 2 . ? 1.982 20.262 10.673 1.00 9.04 ? 28 HOH A O 1 HETATM 251 O O . HOH C 2 . ? 6.626 14.303 4.524 1.00 8.20 ? 29 HOH A O 1 HETATM 252 O O . HOH C 2 . ? 4.819 5.474 11.002 1.00 6.90 ? 30 HOH A O 1 HETATM 253 O O . HOH C 2 . ? 8.250 11.897 18.245 1.00 24.24 ? 31 HOH A O 1 HETATM 254 O O . HOH C 2 . ? 3.617 20.352 18.153 1.00 13.62 ? 32 HOH A O 1 HETATM 255 O O . HOH C 2 . ? -0.446 8.161 17.630 1.00 6.86 ? 33 HOH A O 1 HETATM 256 O O . HOH C 2 . ? 0.581 4.800 0.742 1.00 23.80 ? 35 HOH A O 1 HETATM 257 O O . HOH C 2 . ? 6.516 7.403 10.660 1.00 10.80 ? 36 HOH A O 1 HETATM 258 O O . HOH C 2 . ? -4.175 9.095 6.905 1.00 26.20 ? 43 HOH A O 1 HETATM 259 O O . HOH D 2 . ? 16.638 10.876 17.762 1.00 4.23 ? 14 HOH B O 1 HETATM 260 O O . HOH D 2 . ? 8.655 12.546 3.927 1.00 8.69 ? 19 HOH B O 1 HETATM 261 O O . HOH D 2 . ? 11.019 10.837 21.307 1.00 2.00 ? 20 HOH B O 1 HETATM 262 O O . HOH D 2 . ? 15.503 17.807 21.109 1.00 6.51 ? 21 HOH B O 1 HETATM 263 O O . HOH D 2 . ? 8.484 5.826 16.624 1.00 25.51 ? 24 HOH B O 1 HETATM 264 O O . HOH D 2 . ? 8.502 13.053 0.141 1.00 5.35 ? 27 HOH B O 1 HETATM 265 O O . HOH D 2 . ? 11.284 19.245 4.484 1.00 21.86 ? 34 HOH B O 1 HETATM 266 O O . HOH D 2 . ? -3.203 18.249 7.708 1.00 26.27 ? 37 HOH B O 1 HETATM 267 O O . HOH D 2 . ? 11.461 15.456 22.167 1.00 11.93 ? 38 HOH B O 1 HETATM 268 O O . HOH D 2 . ? -2.849 13.768 2.872 1.00 24.75 ? 39 HOH B O 1 HETATM 269 O O . HOH D 2 . ? -4.681 16.199 2.921 1.00 21.17 ? 40 HOH B O 1 HETATM 270 O O . HOH D 2 . ? -5.509 17.637 0.224 1.00 26.22 ? 41 HOH B O 1 HETATM 271 O O . HOH D 2 . ? -8.528 18.005 0.004 1.00 26.20 ? 42 HOH B O 1 #