data_241D # _entry.id 241D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 241D pdb_0000241d 10.2210/pdb241d/pdb RCSB UDF043 ? ? WWPDB D_1000177633 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1996-04-03 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 241D _pdbx_database_status.recvd_initial_deposition_date 1995-12-07 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Berger, I.' 1 'Kang, C.' 2 'Fredian, A.' 3 'Ratliff, R.' 4 'Moyzis, R.' 5 'Rich, A.' 6 # _citation.id primary _citation.title 'Extension of the four-stranded intercalated cytosine motif by adenine.adenine base pairing in the crystal structure of d(CCCAAT).' _citation.journal_abbrev Nat.Struct.Biol. _citation.journal_volume 2 _citation.page_first 416 _citation.page_last 425 _citation.year 1995 _citation.journal_id_ASTM NSBIEW _citation.country US _citation.journal_id_ISSN 1072-8368 _citation.journal_id_CSD 2024 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 7664099 _citation.pdbx_database_id_DOI 10.1038/nsb0595-416 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Berger, I.' 1 ? primary 'Kang, C.' 2 ? primary 'Fredian, A.' 3 ? primary 'Ratliff, R.' 4 ? primary 'Moyzis, R.' 5 ? primary 'Rich, A.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*CP*CP*AP*AP*T)-3') ; 1753.194 2 ? ? ? ? 2 water nat water 18.015 57 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DC)(DA)(DA)(DT)' _entity_poly.pdbx_seq_one_letter_code_can CCCAAT _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DC n 1 4 DA n 1 5 DA n 1 6 DT n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DC 3 3 3 DC C A . n A 1 4 DA 4 4 4 DA A A . n A 1 5 DA 5 5 5 DA A A . n A 1 6 DT 6 6 6 DT T A . n B 1 1 DC 1 11 11 DC C B . n B 1 2 DC 2 12 12 DC C B . n B 1 3 DC 3 13 13 DC C B . n B 1 4 DA 4 14 14 DA A B . n B 1 5 DA 5 15 15 DA A B . n B 1 6 DT 6 16 16 DT T B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 18 18 HOH HOH A . C 2 HOH 2 20 20 HOH HOH A . C 2 HOH 3 22 22 HOH HOH A . C 2 HOH 4 26 26 HOH HOH A . C 2 HOH 5 27 27 HOH HOH A . C 2 HOH 6 29 29 HOH HOH A . C 2 HOH 7 32 32 HOH HOH A . C 2 HOH 8 35 35 HOH HOH A . C 2 HOH 9 36 36 HOH HOH A . C 2 HOH 10 40 40 HOH HOH A . C 2 HOH 11 42 42 HOH HOH A . C 2 HOH 12 43 43 HOH HOH A . C 2 HOH 13 44 44 HOH HOH A . C 2 HOH 14 45 45 HOH HOH A . C 2 HOH 15 46 46 HOH HOH A . C 2 HOH 16 47 47 HOH HOH A . C 2 HOH 17 48 48 HOH HOH A . C 2 HOH 18 49 49 HOH HOH A . C 2 HOH 19 50 50 HOH HOH A . C 2 HOH 20 51 51 HOH HOH A . C 2 HOH 21 52 52 HOH HOH A . C 2 HOH 22 54 54 HOH HOH A . C 2 HOH 23 55 55 HOH HOH A . C 2 HOH 24 59 59 HOH HOH A . C 2 HOH 25 60 60 HOH HOH A . C 2 HOH 26 62 62 HOH HOH A . C 2 HOH 27 66 66 HOH HOH A . C 2 HOH 28 67 67 HOH HOH A . C 2 HOH 29 68 68 HOH HOH A . C 2 HOH 30 70 70 HOH HOH A . C 2 HOH 31 71 71 HOH HOH A . C 2 HOH 32 72 72 HOH HOH A . C 2 HOH 33 73 73 HOH HOH A . D 2 HOH 1 17 17 HOH HOH B . D 2 HOH 2 19 19 HOH HOH B . D 2 HOH 3 21 21 HOH HOH B . D 2 HOH 4 23 23 HOH HOH B . D 2 HOH 5 24 24 HOH HOH B . D 2 HOH 6 25 25 HOH HOH B . D 2 HOH 7 28 28 HOH HOH B . D 2 HOH 8 30 30 HOH HOH B . D 2 HOH 9 31 31 HOH HOH B . D 2 HOH 10 33 33 HOH HOH B . D 2 HOH 11 34 34 HOH HOH B . D 2 HOH 12 37 37 HOH HOH B . D 2 HOH 13 38 38 HOH HOH B . D 2 HOH 14 39 39 HOH HOH B . D 2 HOH 15 41 41 HOH HOH B . D 2 HOH 16 53 53 HOH HOH B . D 2 HOH 17 56 56 HOH HOH B . D 2 HOH 18 57 57 HOH HOH B . D 2 HOH 19 58 58 HOH HOH B . D 2 HOH 20 61 61 HOH HOH B . D 2 HOH 21 63 63 HOH HOH B . D 2 HOH 22 64 64 HOH HOH B . D 2 HOH 23 65 65 HOH HOH B . D 2 HOH 24 69 69 HOH HOH B . # _software.name X-PLOR _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 241D _cell.length_a 32.180 _cell.length_b 32.180 _cell.length_c 52.490 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 241D _symmetry.space_group_name_H-M 'P 62' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 # _exptl.entry_id 241D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.24 _exptl_crystal.density_percent_sol 45.03 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277.00 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.00 _exptl_crystal_grow.pdbx_details 'pH 6.00, VAPOR DIFFUSION, HANGING DROP, temperature 277.00K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 MPD ? ? ? 1 3 1 SPERMINE ? ? ? 1 4 1 'NA CACODYLATE' ? ? ? 1 5 2 WATER ? ? ? 1 6 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 277.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IIC' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source ? _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _refine.entry_id 241D _refine.ls_number_reflns_obs 2285 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.000 _refine.ls_d_res_high 1.850 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1940000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1940000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 232 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 57 _refine_hist.number_atoms_total 289 _refine_hist.d_res_high 1.850 _refine_hist.d_res_low 10.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.028 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 3.70 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 241D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 241D _struct.title 'EXTENSION OF THE FOUR-STRANDED INTERCALATED CYTOSINE MOTIF BY ADENINE.ADENINE BASE PAIRING IN THE CRYSTAL STRUCTURE OF D(CCCAAT)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 241D _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'U-DNA, QUADRUPLE HELIX, ARALLEL-STRANDED TETRAPLEX, BASE INTERCALATED, MISMATCHED, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 241D _struct_ref.pdbx_db_accession 241D _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 241D A 1 ? 6 ? 241D 1 ? 6 ? 1 6 2 1 241D B 1 ? 6 ? 241D 11 ? 16 ? 11 16 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_565 -x,-y+1,z -1.0000000000 0.0000000000 0.0000000000 -16.0900000000 0.0000000000 -1.0000000000 0.0000000000 27.8686974938 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DC 1 O2 ? ? A DC 1 B DC 11 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog2 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DC 1 N4 ? ? A DC 1 B DC 11 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog3 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DC 2 O2 ? ? A DC 2 B DC 12 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog4 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DC 2 N4 ? ? A DC 2 B DC 12 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog5 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DC 3 O2 ? ? A DC 3 B DC 13 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog6 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DC 3 N4 ? ? A DC 3 B DC 13 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog7 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DA 4 N6 ? ? A DA 4 B DA 14 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog8 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DA 4 N7 ? ? A DA 4 B DA 14 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog9 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DA 5 N6 ? ? A DA 5 B DA 15 1_555 ? ? ? ? ? ? TYPE_1_PAIR ? ? ? hydrog10 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DA 5 N1 ? ? A DA 5 B DA 15 1_555 ? ? ? ? ? ? TYPE_1_PAIR ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C4'" A DC 1 ? ? "C3'" A DC 1 ? ? 1.439 1.521 -0.082 0.010 N 2 1 "C2'" A DC 1 ? ? "C1'" A DC 1 ? ? 1.590 1.519 0.071 0.010 N 3 1 "O4'" A DC 1 ? ? "C4'" A DC 1 ? ? 1.368 1.446 -0.078 0.010 N 4 1 "O3'" A DC 1 ? ? "C3'" A DC 1 ? ? 1.372 1.419 -0.047 0.006 N 5 1 "C5'" A DC 2 ? ? "C4'" A DC 2 ? ? 1.575 1.512 0.063 0.007 N 6 1 "C4'" A DC 2 ? ? "C3'" A DC 2 ? ? 1.454 1.521 -0.067 0.010 N 7 1 "C2'" A DC 2 ? ? "C1'" A DC 2 ? ? 1.615 1.519 0.096 0.010 N 8 1 "C5'" A DC 3 ? ? "C4'" A DC 3 ? ? 1.590 1.512 0.078 0.007 N 9 1 N3 A DC 3 ? ? C4 A DC 3 ? ? 1.269 1.335 -0.066 0.007 N 10 1 C4 A DA 4 ? ? C5 A DA 4 ? ? 1.326 1.383 -0.057 0.007 N 11 1 C6 A DA 4 ? ? N1 A DA 4 ? ? 1.302 1.351 -0.049 0.007 N 12 1 N9 A DA 4 ? ? C4 A DA 4 ? ? 1.316 1.374 -0.058 0.006 N 13 1 "C5'" A DA 5 ? ? "C4'" A DA 5 ? ? 1.593 1.512 0.081 0.007 N 14 1 "C4'" A DA 5 ? ? "C3'" A DA 5 ? ? 1.595 1.529 0.066 0.010 N 15 1 "C2'" A DT 6 ? ? "C1'" A DT 6 ? ? 1.606 1.519 0.087 0.010 N 16 1 N1 A DT 6 ? ? C2 A DT 6 ? ? 1.326 1.376 -0.050 0.008 N 17 1 C4 A DT 6 ? ? C5 A DT 6 ? ? 1.390 1.445 -0.055 0.009 N 18 1 C6 A DT 6 ? ? N1 A DT 6 ? ? 1.335 1.378 -0.043 0.007 N 19 1 C5 A DT 6 ? ? C7 A DT 6 ? ? 1.562 1.496 0.066 0.006 N 20 1 "C5'" B DC 11 ? ? "C4'" B DC 11 ? ? 1.613 1.512 0.101 0.007 N 21 1 "C2'" B DC 11 ? ? "C1'" B DC 11 ? ? 1.580 1.519 0.061 0.010 N 22 1 N3 B DC 11 ? ? C4 B DC 11 ? ? 1.284 1.335 -0.051 0.007 N 23 1 C2 B DC 12 ? ? N3 B DC 12 ? ? 1.409 1.353 0.056 0.008 N 24 1 N1 B DC 13 ? ? C6 B DC 13 ? ? 1.325 1.367 -0.042 0.006 N 25 1 C2 B DC 13 ? ? N3 B DC 13 ? ? 1.303 1.353 -0.050 0.008 N 26 1 "C4'" B DA 14 ? ? "C3'" B DA 14 ? ? 1.437 1.521 -0.084 0.010 N 27 1 C6 B DA 14 ? ? N6 B DA 14 ? ? 1.286 1.335 -0.049 0.008 N 28 1 "C5'" B DA 15 ? ? "C4'" B DA 15 ? ? 1.581 1.512 0.069 0.007 N 29 1 C6 B DA 15 ? ? N1 B DA 15 ? ? 1.304 1.351 -0.047 0.007 N 30 1 C5 B DA 15 ? ? N7 B DA 15 ? ? 1.436 1.388 0.048 0.006 N 31 1 P B DT 16 ? ? "O5'" B DT 16 ? ? 1.661 1.593 0.068 0.010 N 32 1 C5 B DT 16 ? ? C7 B DT 16 ? ? 1.541 1.496 0.045 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 1 ? ? "C4'" A DC 1 ? ? "C3'" A DC 1 ? ? 102.08 104.50 -2.42 0.40 N 2 1 "C3'" A DC 1 ? ? "C2'" A DC 1 ? ? "C1'" A DC 1 ? ? 97.37 102.40 -5.03 0.80 N 3 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 101.39 108.00 -6.61 0.70 N 4 1 C5 A DC 1 ? ? C6 A DC 1 ? ? N1 A DC 1 ? ? 124.63 121.00 3.63 0.50 N 5 1 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 124.78 118.90 5.88 0.60 N 6 1 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 115.09 121.90 -6.81 0.70 N 7 1 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 125.21 118.90 6.31 0.60 N 8 1 N3 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 114.09 121.90 -7.81 0.70 N 9 1 N3 A DC 3 ? ? C4 A DC 3 ? ? N4 A DC 3 ? ? 111.53 118.00 -6.47 0.70 N 10 1 C5 A DC 3 ? ? C4 A DC 3 ? ? N4 A DC 3 ? ? 124.90 120.20 4.70 0.70 N 11 1 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? "C2'" A DA 5 ? ? 110.46 106.80 3.66 0.50 N 12 1 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 112.05 108.30 3.75 0.30 N 13 1 C2 A DA 5 ? ? N3 A DA 5 ? ? C4 A DA 5 ? ? 106.07 110.60 -4.53 0.50 N 14 1 "C3'" A DA 5 ? ? "O3'" A DA 5 ? ? P A DT 6 ? ? 131.28 119.70 11.58 1.20 Y 15 1 P A DT 6 ? ? "O5'" A DT 6 ? ? "C5'" A DT 6 ? ? 109.49 120.90 -11.41 1.60 N 16 1 C6 A DT 6 ? ? C5 A DT 6 ? ? C7 A DT 6 ? ? 118.51 122.90 -4.39 0.60 N 17 1 "O4'" B DC 11 ? ? "C1'" B DC 11 ? ? N1 B DC 11 ? ? 112.22 108.30 3.92 0.30 N 18 1 N1 B DC 11 ? ? C2 B DC 11 ? ? O2 B DC 11 ? ? 123.31 118.90 4.41 0.60 N 19 1 N3 B DC 11 ? ? C2 B DC 11 ? ? O2 B DC 11 ? ? 117.27 121.90 -4.63 0.70 N 20 1 "O5'" B DC 13 ? ? "C5'" B DC 13 ? ? "C4'" B DC 13 ? ? 100.58 109.40 -8.82 0.80 N 21 1 "C1'" B DC 13 ? ? "O4'" B DC 13 ? ? "C4'" B DC 13 ? ? 102.94 110.10 -7.16 1.00 N 22 1 C6 B DC 13 ? ? N1 B DC 13 ? ? C2 B DC 13 ? ? 125.27 120.30 4.97 0.40 N 23 1 C2 B DC 13 ? ? N3 B DC 13 ? ? C4 B DC 13 ? ? 115.00 119.90 -4.90 0.50 N 24 1 N3 B DC 13 ? ? C4 B DC 13 ? ? C5 B DC 13 ? ? 127.81 121.90 5.91 0.40 N 25 1 C5 B DC 13 ? ? C6 B DC 13 ? ? N1 B DC 13 ? ? 117.37 121.00 -3.63 0.50 N 26 1 C5 B DC 13 ? ? C4 B DC 13 ? ? N4 B DC 13 ? ? 114.97 120.20 -5.23 0.70 N 27 1 N9 B DA 14 ? ? "C1'" B DA 14 ? ? "C2'" B DA 14 ? ? 125.66 114.30 11.36 1.40 N 28 1 "O4'" B DA 14 ? ? "C1'" B DA 14 ? ? N9 B DA 14 ? ? 96.10 108.00 -11.90 0.70 N 29 1 C5 B DA 14 ? ? C6 B DA 14 ? ? N1 B DA 14 ? ? 121.67 117.70 3.97 0.50 N 30 1 N1 B DA 15 ? ? C6 B DA 15 ? ? N6 B DA 15 ? ? 113.94 118.60 -4.66 0.60 N 31 1 "O4'" B DT 16 ? ? "C1'" B DT 16 ? ? N1 B DT 16 ? ? 99.09 108.00 -8.91 0.70 N 32 1 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 118.77 122.90 -4.13 0.60 N # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 B HOH 23 ? D HOH . 2 1 B HOH 63 ? D HOH . # loop_ _refine_B_iso.class _refine_B_iso.details _refine_B_iso.treatment _refine_B_iso.pdbx_refine_id 'ALL ATOMS' TR isotropic 'X-RAY DIFFRACTION' 'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION' # loop_ _refine_occupancy.class _refine_occupancy.treatment _refine_occupancy.pdbx_refine_id 'ALL ATOMS' fix 'X-RAY DIFFRACTION' 'ALL WATERS' fix 'X-RAY DIFFRACTION' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DT OP3 O N N 71 DT P P N N 72 DT OP1 O N N 73 DT OP2 O N N 74 DT "O5'" O N N 75 DT "C5'" C N N 76 DT "C4'" C N R 77 DT "O4'" O N N 78 DT "C3'" C N S 79 DT "O3'" O N N 80 DT "C2'" C N N 81 DT "C1'" C N R 82 DT N1 N N N 83 DT C2 C N N 84 DT O2 O N N 85 DT N3 N N N 86 DT C4 C N N 87 DT O4 O N N 88 DT C5 C N N 89 DT C7 C N N 90 DT C6 C N N 91 DT HOP3 H N N 92 DT HOP2 H N N 93 DT "H5'" H N N 94 DT "H5''" H N N 95 DT "H4'" H N N 96 DT "H3'" H N N 97 DT "HO3'" H N N 98 DT "H2'" H N N 99 DT "H2''" H N N 100 DT "H1'" H N N 101 DT H3 H N N 102 DT H71 H N N 103 DT H72 H N N 104 DT H73 H N N 105 DT H6 H N N 106 HOH O O N N 107 HOH H1 H N N 108 HOH H2 H N N 109 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DT OP3 P sing N N 74 DT OP3 HOP3 sing N N 75 DT P OP1 doub N N 76 DT P OP2 sing N N 77 DT P "O5'" sing N N 78 DT OP2 HOP2 sing N N 79 DT "O5'" "C5'" sing N N 80 DT "C5'" "C4'" sing N N 81 DT "C5'" "H5'" sing N N 82 DT "C5'" "H5''" sing N N 83 DT "C4'" "O4'" sing N N 84 DT "C4'" "C3'" sing N N 85 DT "C4'" "H4'" sing N N 86 DT "O4'" "C1'" sing N N 87 DT "C3'" "O3'" sing N N 88 DT "C3'" "C2'" sing N N 89 DT "C3'" "H3'" sing N N 90 DT "O3'" "HO3'" sing N N 91 DT "C2'" "C1'" sing N N 92 DT "C2'" "H2'" sing N N 93 DT "C2'" "H2''" sing N N 94 DT "C1'" N1 sing N N 95 DT "C1'" "H1'" sing N N 96 DT N1 C2 sing N N 97 DT N1 C6 sing N N 98 DT C2 O2 doub N N 99 DT C2 N3 sing N N 100 DT N3 C4 sing N N 101 DT N3 H3 sing N N 102 DT C4 O4 doub N N 103 DT C4 C5 sing N N 104 DT C5 C7 sing N N 105 DT C5 C6 doub N N 106 DT C7 H71 sing N N 107 DT C7 H72 sing N N 108 DT C7 H73 sing N N 109 DT C6 H6 sing N N 110 HOH O H1 sing N N 111 HOH O H2 sing N N 112 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 241D 'double helix' 241D 'parallel strands' 241D 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DC 1 1_555 2.101 1.455 -0.182 -10.599 0.809 178.730 1 A_DC1:DC11_B A 1 ? B 11 ? 15 2 1 A DC 2 1_555 B DC 2 1_555 2.064 1.555 0.094 -3.408 2.826 179.004 2 A_DC2:DC12_B A 2 ? B 12 ? 15 2 1 A DC 3 1_555 B DC 3 1_555 -2.136 -1.616 0.134 -1.263 2.191 -176.255 3 A_DC3:DC13_B A 3 ? B 13 ? 15 2 1 A DA 4 1_555 B DA 4 1_555 3.972 1.170 0.481 -10.919 17.011 -108.275 4 A_DA4:DA14_B A 4 ? B 14 ? 5 4 1 A DA 5 1_555 B DA 5 1_555 1.427 0.587 0.200 -4.173 -6.432 -178.072 5 A_DA5:DA15_B A 5 ? B 15 ? 1 2 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DC 1 1_555 A DC 2 1_555 B DC 2 1_555 0.350 -0.667 6.310 -1.157 -3.736 16.861 2.320 -2.569 6.269 -12.523 3.877 17.306 1 AA_DC1DC2:DC12DC11_BB A 1 ? B 11 ? A 2 ? B 12 ? 1 A DC 2 1_555 B DC 2 1_555 A DC 3 1_555 B DC 3 1_555 -0.507 -0.136 6.518 2.704 -1.087 -159.889 0.075 -0.244 6.520 0.552 1.373 -159.895 2 AA_DC2DC3:DC13DC12_BB A 2 ? B 12 ? A 3 ? B 13 ? 1 A DC 3 1_555 B DC 3 1_555 A DA 4 1_555 B DA 4 1_555 -2.557 -1.040 6.125 2.990 -9.039 -27.068 5.909 -3.905 5.731 18.596 6.152 -28.664 3 AA_DC3DA4:DA14DC13_BB A 3 ? B 13 ? A 4 ? B 14 ? 1 A DA 4 1_555 B DA 4 1_555 A DA 5 1_555 B DA 5 1_555 3.002 -1.586 3.259 0.632 2.182 68.511 -1.489 -2.642 3.238 1.938 -0.561 68.544 4 AA_DA4DA5:DA15DA14_BB A 4 ? B 14 ? A 5 ? B 15 ? # _atom_sites.entry_id 241D _atom_sites.fract_transf_matrix[1][1] 0.031075 _atom_sites.fract_transf_matrix[1][2] 0.017941 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.035883 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019051 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DC A 1 1 ? -5.614 21.920 15.112 1.00 21.17 ? 1 DC A "O5'" 1 ATOM 2 C "C5'" . DC A 1 1 ? -6.611 22.753 14.546 1.00 21.28 ? 1 DC A "C5'" 1 ATOM 3 C "C4'" . DC A 1 1 ? -6.825 22.465 13.052 1.00 21.08 ? 1 DC A "C4'" 1 ATOM 4 O "O4'" . DC A 1 1 ? -5.619 22.430 12.408 1.00 21.84 ? 1 DC A "O4'" 1 ATOM 5 C "C3'" . DC A 1 1 ? -7.343 21.148 12.793 1.00 23.43 ? 1 DC A "C3'" 1 ATOM 6 O "O3'" . DC A 1 1 ? -8.654 21.123 13.197 1.00 25.06 ? 1 DC A "O3'" 1 ATOM 7 C "C2'" . DC A 1 1 ? -7.206 21.016 11.251 1.00 21.57 ? 1 DC A "C2'" 1 ATOM 8 C "C1'" . DC A 1 1 ? -5.864 21.854 11.093 1.00 20.05 ? 1 DC A "C1'" 1 ATOM 9 N N1 . DC A 1 1 ? -4.597 21.102 10.860 1.00 16.40 ? 1 DC A N1 1 ATOM 10 C C2 . DC A 1 1 ? -4.164 20.839 9.605 1.00 16.32 ? 1 DC A C2 1 ATOM 11 O O2 . DC A 1 1 ? -4.770 21.302 8.641 1.00 16.33 ? 1 DC A O2 1 ATOM 12 N N3 . DC A 1 1 ? -3.049 20.070 9.493 1.00 14.99 ? 1 DC A N3 1 ATOM 13 C C4 . DC A 1 1 ? -2.386 19.592 10.553 1.00 13.20 ? 1 DC A C4 1 ATOM 14 N N4 . DC A 1 1 ? -1.310 18.860 10.426 1.00 13.04 ? 1 DC A N4 1 ATOM 15 C C5 . DC A 1 1 ? -2.817 19.866 11.850 1.00 14.53 ? 1 DC A C5 1 ATOM 16 C C6 . DC A 1 1 ? -3.920 20.623 11.926 1.00 14.71 ? 1 DC A C6 1 ATOM 17 P P . DC A 1 2 ? -9.297 19.879 13.856 1.00 26.96 ? 2 DC A P 1 ATOM 18 O OP1 . DC A 1 2 ? -10.375 20.378 14.723 1.00 26.38 ? 2 DC A OP1 1 ATOM 19 O OP2 . DC A 1 2 ? -8.255 18.967 14.367 1.00 26.54 ? 2 DC A OP2 1 ATOM 20 O "O5'" . DC A 1 2 ? -10.115 19.198 12.648 1.00 26.61 ? 2 DC A "O5'" 1 ATOM 21 C "C5'" . DC A 1 2 ? -11.241 19.870 12.002 1.00 25.16 ? 2 DC A "C5'" 1 ATOM 22 C "C4'" . DC A 1 2 ? -11.633 19.234 10.616 1.00 23.39 ? 2 DC A "C4'" 1 ATOM 23 O "O4'" . DC A 1 2 ? -10.468 18.979 9.855 1.00 22.05 ? 2 DC A "O4'" 1 ATOM 24 C "C3'" . DC A 1 2 ? -12.288 17.947 10.786 1.00 24.66 ? 2 DC A "C3'" 1 ATOM 25 O "O3'" . DC A 1 2 ? -13.707 18.166 10.955 1.00 27.78 ? 2 DC A "O3'" 1 ATOM 26 C "C2'" . DC A 1 2 ? -11.934 17.138 9.491 1.00 22.23 ? 2 DC A "C2'" 1 ATOM 27 C "C1'" . DC A 1 2 ? -10.556 17.847 9.035 1.00 20.22 ? 2 DC A "C1'" 1 ATOM 28 N N1 . DC A 1 2 ? -9.334 16.987 9.286 1.00 17.98 ? 2 DC A N1 1 ATOM 29 C C2 . DC A 1 2 ? -8.635 16.431 8.244 1.00 16.77 ? 2 DC A C2 1 ATOM 30 O O2 . DC A 1 2 ? -8.872 16.634 7.048 1.00 19.33 ? 2 DC A O2 1 ATOM 31 N N3 . DC A 1 2 ? -7.603 15.608 8.488 1.00 15.99 ? 2 DC A N3 1 ATOM 32 C C4 . DC A 1 2 ? -7.245 15.331 9.715 1.00 16.06 ? 2 DC A C4 1 ATOM 33 N N4 . DC A 1 2 ? -6.250 14.485 9.825 1.00 15.57 ? 2 DC A N4 1 ATOM 34 C C5 . DC A 1 2 ? -7.921 15.895 10.839 1.00 15.84 ? 2 DC A C5 1 ATOM 35 C C6 . DC A 1 2 ? -8.961 16.719 10.579 1.00 17.90 ? 2 DC A C6 1 ATOM 36 P P . DC A 1 3 ? -14.514 17.052 11.838 1.00 29.47 ? 3 DC A P 1 ATOM 37 O OP1 . DC A 1 3 ? -15.723 17.697 12.401 1.00 29.27 ? 3 DC A OP1 1 ATOM 38 O OP2 . DC A 1 3 ? -13.533 16.362 12.725 1.00 28.32 ? 3 DC A OP2 1 ATOM 39 O "O5'" . DC A 1 3 ? -15.082 16.097 10.655 1.00 28.62 ? 3 DC A "O5'" 1 ATOM 40 C "C5'" . DC A 1 3 ? -15.779 16.526 9.427 1.00 27.30 ? 3 DC A "C5'" 1 ATOM 41 C "C4'" . DC A 1 3 ? -15.816 15.314 8.399 1.00 27.73 ? 3 DC A "C4'" 1 ATOM 42 O "O4'" . DC A 1 3 ? -14.477 14.758 8.182 1.00 25.77 ? 3 DC A "O4'" 1 ATOM 43 C "C3'" . DC A 1 3 ? -16.619 14.158 8.956 1.00 27.37 ? 3 DC A "C3'" 1 ATOM 44 O "O3'" . DC A 1 3 ? -18.043 14.330 8.699 1.00 30.59 ? 3 DC A "O3'" 1 ATOM 45 C "C2'" . DC A 1 3 ? -16.044 12.981 8.153 1.00 26.30 ? 3 DC A "C2'" 1 ATOM 46 C "C1'" . DC A 1 3 ? -14.599 13.388 7.856 1.00 22.91 ? 3 DC A "C1'" 1 ATOM 47 N N1 . DC A 1 3 ? -13.653 12.594 8.654 1.00 20.32 ? 3 DC A N1 1 ATOM 48 C C2 . DC A 1 3 ? -12.785 11.743 8.053 1.00 18.42 ? 3 DC A C2 1 ATOM 49 O O2 . DC A 1 3 ? -12.642 11.623 6.865 1.00 18.88 ? 3 DC A O2 1 ATOM 50 N N3 . DC A 1 3 ? -11.978 10.999 8.766 1.00 17.30 ? 3 DC A N3 1 ATOM 51 C C4 . DC A 1 3 ? -11.987 11.089 10.032 1.00 16.67 ? 3 DC A C4 1 ATOM 52 N N4 . DC A 1 3 ? -11.088 10.321 10.571 1.00 16.43 ? 3 DC A N4 1 ATOM 53 C C5 . DC A 1 3 ? -12.836 11.946 10.740 1.00 16.83 ? 3 DC A C5 1 ATOM 54 C C6 . DC A 1 3 ? -13.664 12.688 10.001 1.00 18.07 ? 3 DC A C6 1 ATOM 55 P P . DA A 1 4 ? -19.211 13.640 9.609 1.00 32.30 ? 4 DA A P 1 ATOM 56 O OP1 . DA A 1 4 ? -20.279 14.666 9.747 1.00 33.44 ? 4 DA A OP1 1 ATOM 57 O OP2 . DA A 1 4 ? -18.716 13.038 10.875 1.00 33.13 ? 4 DA A OP2 1 ATOM 58 O "O5'" . DA A 1 4 ? -19.817 12.470 8.742 1.00 31.97 ? 4 DA A "O5'" 1 ATOM 59 C "C5'" . DA A 1 4 ? -19.146 11.284 8.829 1.00 31.09 ? 4 DA A "C5'" 1 ATOM 60 C "C4'" . DA A 1 4 ? -19.206 10.661 7.479 1.00 30.47 ? 4 DA A "C4'" 1 ATOM 61 O "O4'" . DA A 1 4 ? -18.110 9.773 7.389 1.00 28.45 ? 4 DA A "O4'" 1 ATOM 62 C "C3'" . DA A 1 4 ? -20.507 9.812 7.320 1.00 30.13 ? 4 DA A "C3'" 1 ATOM 63 O "O3'" . DA A 1 4 ? -20.972 9.779 5.976 1.00 32.76 ? 4 DA A "O3'" 1 ATOM 64 C "C2'" . DA A 1 4 ? -20.093 8.426 7.713 1.00 27.85 ? 4 DA A "C2'" 1 ATOM 65 C "C1'" . DA A 1 4 ? -18.613 8.413 7.350 1.00 24.93 ? 4 DA A "C1'" 1 ATOM 66 N N9 . DA A 1 4 ? -17.802 7.663 8.326 1.00 18.85 ? 4 DA A N9 1 ATOM 67 C C8 . DA A 1 4 ? -17.836 7.781 9.646 1.00 17.16 ? 4 DA A C8 1 ATOM 68 N N7 . DA A 1 4 ? -16.998 7.020 10.251 1.00 16.42 ? 4 DA A N7 1 ATOM 69 C C5 . DA A 1 4 ? -16.380 6.368 9.231 1.00 13.78 ? 4 DA A C5 1 ATOM 70 C C6 . DA A 1 4 ? -15.376 5.442 9.217 1.00 13.94 ? 4 DA A C6 1 ATOM 71 N N6 . DA A 1 4 ? -14.788 4.963 10.289 1.00 14.53 ? 4 DA A N6 1 ATOM 72 N N1 . DA A 1 4 ? -14.968 5.003 8.061 1.00 12.65 ? 4 DA A N1 1 ATOM 73 C C2 . DA A 1 4 ? -15.560 5.478 6.978 1.00 13.30 ? 4 DA A C2 1 ATOM 74 N N3 . DA A 1 4 ? -16.526 6.360 6.860 1.00 14.32 ? 4 DA A N3 1 ATOM 75 C C4 . DA A 1 4 ? -16.881 6.760 8.067 1.00 15.56 ? 4 DA A C4 1 ATOM 76 P P . DA A 1 5 ? -22.490 9.298 5.643 1.00 36.85 ? 5 DA A P 1 ATOM 77 O OP1 . DA A 1 5 ? -23.117 10.281 4.724 1.00 36.49 ? 5 DA A OP1 1 ATOM 78 O OP2 . DA A 1 5 ? -23.186 8.910 6.901 1.00 36.57 ? 5 DA A OP2 1 ATOM 79 O "O5'" . DA A 1 5 ? -22.237 7.960 4.845 1.00 36.61 ? 5 DA A "O5'" 1 ATOM 80 C "C5'" . DA A 1 5 ? -21.396 7.857 3.652 1.00 35.05 ? 5 DA A "C5'" 1 ATOM 81 C "C4'" . DA A 1 5 ? -20.986 6.338 3.402 1.00 34.04 ? 5 DA A "C4'" 1 ATOM 82 O "O4'" . DA A 1 5 ? -20.067 5.894 4.464 1.00 32.05 ? 5 DA A "O4'" 1 ATOM 83 C "C3'" . DA A 1 5 ? -22.284 5.411 3.439 1.00 33.47 ? 5 DA A "C3'" 1 ATOM 84 O "O3'" . DA A 1 5 ? -22.277 4.411 2.356 1.00 36.93 ? 5 DA A "O3'" 1 ATOM 85 C "C2'" . DA A 1 5 ? -22.202 4.742 4.813 1.00 31.15 ? 5 DA A "C2'" 1 ATOM 86 C "C1'" . DA A 1 5 ? -20.687 4.734 5.067 1.00 27.04 ? 5 DA A "C1'" 1 ATOM 87 N N9 . DA A 1 5 ? -20.450 4.672 6.511 1.00 21.29 ? 5 DA A N9 1 ATOM 88 C C8 . DA A 1 5 ? -21.180 5.109 7.557 1.00 18.94 ? 5 DA A C8 1 ATOM 89 N N7 . DA A 1 5 ? -20.649 4.821 8.719 1.00 18.24 ? 5 DA A N7 1 ATOM 90 C C5 . DA A 1 5 ? -19.465 4.127 8.375 1.00 16.73 ? 5 DA A C5 1 ATOM 91 C C6 . DA A 1 5 ? -18.480 3.488 9.131 1.00 15.18 ? 5 DA A C6 1 ATOM 92 N N6 . DA A 1 5 ? -18.392 3.439 10.495 1.00 15.53 ? 5 DA A N6 1 ATOM 93 N N1 . DA A 1 5 ? -17.550 2.884 8.427 1.00 14.34 ? 5 DA A N1 1 ATOM 94 C C2 . DA A 1 5 ? -17.579 2.910 7.101 1.00 15.29 ? 5 DA A C2 1 ATOM 95 N N3 . DA A 1 5 ? -18.412 3.455 6.268 1.00 16.48 ? 5 DA A N3 1 ATOM 96 C C4 . DA A 1 5 ? -19.355 4.058 7.023 1.00 18.01 ? 5 DA A C4 1 ATOM 97 P P . DT A 1 6 ? -23.394 3.318 1.895 1.00 37.54 ? 6 DT A P 1 ATOM 98 O OP1 . DT A 1 6 ? -23.461 3.319 0.409 1.00 36.96 ? 6 DT A OP1 1 ATOM 99 O OP2 . DT A 1 6 ? -24.656 3.463 2.698 1.00 38.11 ? 6 DT A OP2 1 ATOM 100 O "O5'" . DT A 1 6 ? -22.750 1.885 2.332 1.00 36.53 ? 6 DT A "O5'" 1 ATOM 101 C "C5'" . DT A 1 6 ? -21.530 1.674 1.620 1.00 34.53 ? 6 DT A "C5'" 1 ATOM 102 C "C4'" . DT A 1 6 ? -20.534 0.820 2.426 1.00 33.52 ? 6 DT A "C4'" 1 ATOM 103 O "O4'" . DT A 1 6 ? -20.352 1.375 3.755 1.00 31.06 ? 6 DT A "O4'" 1 ATOM 104 C "C3'" . DT A 1 6 ? -21.024 -0.652 2.538 1.00 32.08 ? 6 DT A "C3'" 1 ATOM 105 O "O3'" . DT A 1 6 ? -20.200 -1.506 1.674 1.00 34.99 ? 6 DT A "O3'" 1 ATOM 106 C "C2'" . DT A 1 6 ? -20.792 -1.026 4.011 1.00 31.20 ? 6 DT A "C2'" 1 ATOM 107 C "C1'" . DT A 1 6 ? -20.003 0.246 4.594 1.00 29.16 ? 6 DT A "C1'" 1 ATOM 108 N N1 . DT A 1 6 ? -20.405 0.567 5.967 1.00 24.63 ? 6 DT A N1 1 ATOM 109 C C2 . DT A 1 6 ? -19.617 0.259 6.988 1.00 24.08 ? 6 DT A C2 1 ATOM 110 O O2 . DT A 1 6 ? -18.551 -0.320 6.843 1.00 22.96 ? 6 DT A O2 1 ATOM 111 N N3 . DT A 1 6 ? -20.099 0.615 8.245 1.00 22.65 ? 6 DT A N3 1 ATOM 112 C C4 . DT A 1 6 ? -21.296 1.233 8.511 1.00 22.07 ? 6 DT A C4 1 ATOM 113 O O4 . DT A 1 6 ? -21.650 1.546 9.639 1.00 22.98 ? 6 DT A O4 1 ATOM 114 C C5 . DT A 1 6 ? -22.050 1.490 7.372 1.00 21.85 ? 6 DT A C5 1 ATOM 115 C C7 . DT A 1 6 ? -23.491 2.084 7.481 1.00 21.58 ? 6 DT A C7 1 ATOM 116 C C6 . DT A 1 6 ? -21.583 1.164 6.160 1.00 24.04 ? 6 DT A C6 1 ATOM 117 O "O5'" . DC B 1 1 ? 0.288 17.219 1.258 1.00 32.20 ? 11 DC B "O5'" 1 ATOM 118 C "C5'" . DC B 1 1 ? 1.174 17.875 2.258 1.00 28.66 ? 11 DC B "C5'" 1 ATOM 119 C "C4'" . DC B 1 1 ? 1.559 17.031 3.578 1.00 27.32 ? 11 DC B "C4'" 1 ATOM 120 O "O4'" . DC B 1 1 ? 1.233 17.793 4.818 1.00 26.48 ? 11 DC B "O4'" 1 ATOM 121 C "C3'" . DC B 1 1 ? 0.754 15.729 3.657 1.00 27.42 ? 11 DC B "C3'" 1 ATOM 122 O "O3'" . DC B 1 1 ? 1.468 14.717 4.464 1.00 29.85 ? 11 DC B "O3'" 1 ATOM 123 C "C2'" . DC B 1 1 ? -0.522 16.201 4.375 1.00 25.62 ? 11 DC B "C2'" 1 ATOM 124 C "C1'" . DC B 1 1 ? 0.023 17.289 5.383 1.00 23.33 ? 11 DC B "C1'" 1 ATOM 125 N N1 . DC B 1 1 ? -1.016 18.338 5.509 1.00 19.33 ? 11 DC B N1 1 ATOM 126 C C2 . DC B 1 1 ? -1.499 18.643 6.727 1.00 18.25 ? 11 DC B C2 1 ATOM 127 O O2 . DC B 1 1 ? -1.074 18.148 7.761 1.00 18.27 ? 11 DC B O2 1 ATOM 128 N N3 . DC B 1 1 ? -2.447 19.535 6.836 1.00 16.45 ? 11 DC B N3 1 ATOM 129 C C4 . DC B 1 1 ? -2.922 20.140 5.808 1.00 15.87 ? 11 DC B C4 1 ATOM 130 N N4 . DC B 1 1 ? -3.853 21.030 6.065 1.00 15.11 ? 11 DC B N4 1 ATOM 131 C C5 . DC B 1 1 ? -2.474 19.893 4.492 1.00 16.06 ? 11 DC B C5 1 ATOM 132 C C6 . DC B 1 1 ? -1.505 18.969 4.387 1.00 18.26 ? 11 DC B C6 1 ATOM 133 P P . DC B 1 2 ? 1.585 13.206 3.907 1.00 28.87 ? 12 DC B P 1 ATOM 134 O OP1 . DC B 1 2 ? 2.671 12.391 4.475 1.00 30.36 ? 12 DC B OP1 1 ATOM 135 O OP2 . DC B 1 2 ? 1.303 13.196 2.457 1.00 29.51 ? 12 DC B OP2 1 ATOM 136 O "O5'" . DC B 1 2 ? 0.318 12.737 4.670 1.00 29.04 ? 12 DC B "O5'" 1 ATOM 137 C "C5'" . DC B 1 2 ? -0.602 11.750 4.200 1.00 26.56 ? 12 DC B "C5'" 1 ATOM 138 C "C4'" . DC B 1 2 ? -1.673 11.547 5.307 1.00 24.53 ? 12 DC B "C4'" 1 ATOM 139 O "O4'" . DC B 1 2 ? -2.532 12.679 5.413 1.00 23.92 ? 12 DC B "O4'" 1 ATOM 140 C "C3'" . DC B 1 2 ? -2.522 10.361 4.998 1.00 25.64 ? 12 DC B "C3'" 1 ATOM 141 O "O3'" . DC B 1 2 ? -2.418 9.491 6.142 1.00 27.41 ? 12 DC B "O3'" 1 ATOM 142 C "C2'" . DC B 1 2 ? -3.960 10.926 4.808 1.00 22.80 ? 12 DC B "C2'" 1 ATOM 143 C "C1'" . DC B 1 2 ? -3.809 12.180 5.687 1.00 20.33 ? 12 DC B "C1'" 1 ATOM 144 N N1 . DC B 1 2 ? -4.820 13.201 5.385 1.00 15.05 ? 12 DC B N1 1 ATOM 145 C C2 . DC B 1 2 ? -5.453 13.794 6.410 1.00 15.18 ? 12 DC B C2 1 ATOM 146 O O2 . DC B 1 2 ? -5.120 13.466 7.561 1.00 13.43 ? 12 DC B O2 1 ATOM 147 N N3 . DC B 1 2 ? -6.460 14.733 6.112 1.00 14.12 ? 12 DC B N3 1 ATOM 148 C C4 . DC B 1 2 ? -6.790 15.034 4.848 1.00 13.73 ? 12 DC B C4 1 ATOM 149 N N4 . DC B 1 2 ? -7.741 15.883 4.602 1.00 13.18 ? 12 DC B N4 1 ATOM 150 C C5 . DC B 1 2 ? -6.127 14.422 3.766 1.00 14.64 ? 12 DC B C5 1 ATOM 151 C C6 . DC B 1 2 ? -5.154 13.522 4.077 1.00 16.41 ? 12 DC B C6 1 ATOM 152 P P . DC B 1 3 ? -2.413 7.930 6.051 1.00 28.84 ? 13 DC B P 1 ATOM 153 O OP1 . DC B 1 3 ? -1.657 7.391 7.212 1.00 28.76 ? 13 DC B OP1 1 ATOM 154 O OP2 . DC B 1 3 ? -2.016 7.662 4.630 1.00 29.39 ? 13 DC B OP2 1 ATOM 155 O "O5'" . DC B 1 3 ? -3.922 7.670 6.262 1.00 26.18 ? 13 DC B "O5'" 1 ATOM 156 C "C5'" . DC B 1 3 ? -4.568 6.446 6.275 1.00 25.34 ? 13 DC B "C5'" 1 ATOM 157 C "C4'" . DC B 1 3 ? -5.624 6.693 7.384 1.00 24.81 ? 13 DC B "C4'" 1 ATOM 158 O "O4'" . DC B 1 3 ? -6.502 7.704 6.941 1.00 23.02 ? 13 DC B "O4'" 1 ATOM 159 C "C3'" . DC B 1 3 ? -6.467 5.429 7.667 1.00 24.70 ? 13 DC B "C3'" 1 ATOM 160 O "O3'" . DC B 1 3 ? -6.300 4.988 9.032 1.00 25.91 ? 13 DC B "O3'" 1 ATOM 161 C "C2'" . DC B 1 3 ? -7.931 5.864 7.467 1.00 22.74 ? 13 DC B "C2'" 1 ATOM 162 C "C1'" . DC B 1 3 ? -7.718 7.368 7.577 1.00 20.96 ? 13 DC B "C1'" 1 ATOM 163 N N1 . DC B 1 3 ? -8.675 8.119 6.896 1.00 18.12 ? 13 DC B N1 1 ATOM 164 C C2 . DC B 1 3 ? -9.509 8.889 7.637 1.00 15.05 ? 13 DC B C2 1 ATOM 165 O O2 . DC B 1 3 ? -9.474 8.903 8.863 1.00 18.23 ? 13 DC B O2 1 ATOM 166 N N3 . DC B 1 3 ? -10.395 9.631 7.036 1.00 15.49 ? 13 DC B N3 1 ATOM 167 C C4 . DC B 1 3 ? -10.394 9.545 5.723 1.00 14.14 ? 13 DC B C4 1 ATOM 168 N N4 . DC B 1 3 ? -11.239 10.273 5.086 1.00 14.77 ? 13 DC B N4 1 ATOM 169 C C5 . DC B 1 3 ? -9.572 8.769 4.924 1.00 14.27 ? 13 DC B C5 1 ATOM 170 C C6 . DC B 1 3 ? -8.683 8.036 5.574 1.00 16.54 ? 13 DC B C6 1 ATOM 171 P P . DA B 1 4 ? -5.049 4.164 9.494 1.00 26.82 ? 14 DA B P 1 ATOM 172 O OP1 . DA B 1 4 ? -4.095 5.123 10.077 1.00 28.20 ? 14 DA B OP1 1 ATOM 173 O OP2 . DA B 1 4 ? -4.574 3.190 8.456 1.00 25.99 ? 14 DA B OP2 1 ATOM 174 O "O5'" . DA B 1 4 ? -5.571 3.358 10.728 1.00 26.92 ? 14 DA B "O5'" 1 ATOM 175 C "C5'" . DA B 1 4 ? -6.830 2.694 10.565 1.00 26.66 ? 14 DA B "C5'" 1 ATOM 176 C "C4'" . DA B 1 4 ? -7.451 2.455 11.960 1.00 25.83 ? 14 DA B "C4'" 1 ATOM 177 O "O4'" . DA B 1 4 ? -8.820 2.898 12.023 1.00 25.04 ? 14 DA B "O4'" 1 ATOM 178 C "C3'" . DA B 1 4 ? -7.453 1.044 12.233 1.00 26.38 ? 14 DA B "C3'" 1 ATOM 179 O "O3'" . DA B 1 4 ? -7.509 0.899 13.644 1.00 27.69 ? 14 DA B "O3'" 1 ATOM 180 C "C2'" . DA B 1 4 ? -8.725 0.605 11.539 1.00 24.94 ? 14 DA B "C2'" 1 ATOM 181 C "C1'" . DA B 1 4 ? -9.622 1.799 11.851 1.00 21.80 ? 14 DA B "C1'" 1 ATOM 182 N N9 . DA B 1 4 ? -10.558 2.434 10.915 1.00 20.24 ? 14 DA B N9 1 ATOM 183 C C8 . DA B 1 4 ? -11.796 3.000 11.198 1.00 16.37 ? 14 DA B C8 1 ATOM 184 N N7 . DA B 1 4 ? -12.466 3.337 10.132 1.00 16.06 ? 14 DA B N7 1 ATOM 185 C C5 . DA B 1 4 ? -11.631 2.988 9.090 1.00 15.63 ? 14 DA B C5 1 ATOM 186 C C6 . DA B 1 4 ? -11.704 3.119 7.711 1.00 13.93 ? 14 DA B C6 1 ATOM 187 N N6 . DA B 1 4 ? -12.735 3.600 7.111 1.00 15.68 ? 14 DA B N6 1 ATOM 188 N N1 . DA B 1 4 ? -10.693 2.748 6.915 1.00 15.18 ? 14 DA B N1 1 ATOM 189 C C2 . DA B 1 4 ? -9.603 2.247 7.489 1.00 15.10 ? 14 DA B C2 1 ATOM 190 N N3 . DA B 1 4 ? -9.387 2.055 8.784 1.00 17.61 ? 14 DA B N3 1 ATOM 191 C C4 . DA B 1 4 ? -10.469 2.455 9.535 1.00 16.54 ? 14 DA B C4 1 ATOM 192 P P . DA B 1 5 ? -7.653 -0.539 14.330 1.00 29.52 ? 15 DA B P 1 ATOM 193 O OP1 . DA B 1 5 ? -6.897 -0.542 15.576 1.00 30.44 ? 15 DA B OP1 1 ATOM 194 O OP2 . DA B 1 5 ? -7.445 -1.635 13.353 1.00 29.66 ? 15 DA B OP2 1 ATOM 195 O "O5'" . DA B 1 5 ? -9.159 -0.514 14.778 1.00 29.76 ? 15 DA B "O5'" 1 ATOM 196 C "C5'" . DA B 1 5 ? -9.738 0.366 15.779 1.00 29.63 ? 15 DA B "C5'" 1 ATOM 197 C "C4'" . DA B 1 5 ? -11.304 0.191 15.912 1.00 28.47 ? 15 DA B "C4'" 1 ATOM 198 O "O4'" . DA B 1 5 ? -11.954 0.689 14.761 1.00 27.43 ? 15 DA B "O4'" 1 ATOM 199 C "C3'" . DA B 1 5 ? -11.721 -1.308 16.011 1.00 29.63 ? 15 DA B "C3'" 1 ATOM 200 O "O3'" . DA B 1 5 ? -12.770 -1.441 16.973 1.00 32.10 ? 15 DA B "O3'" 1 ATOM 201 C "C2'" . DA B 1 5 ? -12.286 -1.614 14.624 1.00 27.65 ? 15 DA B "C2'" 1 ATOM 202 C "C1'" . DA B 1 5 ? -12.949 -0.240 14.350 1.00 24.18 ? 15 DA B "C1'" 1 ATOM 203 N N9 . DA B 1 5 ? -13.168 -0.089 12.924 1.00 19.64 ? 15 DA B N9 1 ATOM 204 C C8 . DA B 1 5 ? -12.524 -0.648 11.831 1.00 18.46 ? 15 DA B C8 1 ATOM 205 N N7 . DA B 1 5 ? -13.078 -0.262 10.690 1.00 16.93 ? 15 DA B N7 1 ATOM 206 C C5 . DA B 1 5 ? -14.147 0.606 11.098 1.00 15.03 ? 15 DA B C5 1 ATOM 207 C C6 . DA B 1 5 ? -15.108 1.370 10.412 1.00 13.31 ? 15 DA B C6 1 ATOM 208 N N6 . DA B 1 5 ? -15.253 1.429 9.098 1.00 13.82 ? 15 DA B N6 1 ATOM 209 N N1 . DA B 1 5 ? -15.962 2.102 11.072 1.00 13.33 ? 15 DA B N1 1 ATOM 210 C C2 . DA B 1 5 ? -15.854 2.069 12.403 1.00 15.32 ? 15 DA B C2 1 ATOM 211 N N3 . DA B 1 5 ? -15.015 1.409 13.209 1.00 15.96 ? 15 DA B N3 1 ATOM 212 C C4 . DA B 1 5 ? -14.171 0.682 12.439 1.00 17.16 ? 15 DA B C4 1 ATOM 213 P P . DT B 1 6 ? -12.572 -2.087 18.483 1.00 35.51 ? 16 DT B P 1 ATOM 214 O OP1 . DT B 1 6 ? -12.936 -3.544 18.349 1.00 34.13 ? 16 DT B OP1 1 ATOM 215 O OP2 . DT B 1 6 ? -13.332 -1.144 19.403 1.00 33.82 ? 16 DT B OP2 1 ATOM 216 O "O5'" . DT B 1 6 ? -10.951 -2.059 18.845 1.00 34.84 ? 16 DT B "O5'" 1 ATOM 217 C "C5'" . DT B 1 6 ? -10.462 -1.067 19.800 1.00 34.98 ? 16 DT B "C5'" 1 ATOM 218 C "C4'" . DT B 1 6 ? -9.024 -1.274 20.269 1.00 35.06 ? 16 DT B "C4'" 1 ATOM 219 O "O4'" . DT B 1 6 ? -8.907 -2.481 20.971 1.00 34.93 ? 16 DT B "O4'" 1 ATOM 220 C "C3'" . DT B 1 6 ? -8.048 -1.306 19.107 1.00 35.23 ? 16 DT B "C3'" 1 ATOM 221 O "O3'" . DT B 1 6 ? -6.947 -0.425 19.431 1.00 36.36 ? 16 DT B "O3'" 1 ATOM 222 C "C2'" . DT B 1 6 ? -7.568 -2.771 19.005 1.00 34.78 ? 16 DT B "C2'" 1 ATOM 223 C "C1'" . DT B 1 6 ? -7.779 -3.221 20.493 1.00 34.52 ? 16 DT B "C1'" 1 ATOM 224 N N1 . DT B 1 6 ? -8.259 -4.583 20.773 1.00 34.04 ? 16 DT B N1 1 ATOM 225 C C2 . DT B 1 6 ? -7.679 -5.352 21.729 1.00 34.44 ? 16 DT B C2 1 ATOM 226 O O2 . DT B 1 6 ? -6.725 -4.996 22.379 1.00 34.36 ? 16 DT B O2 1 ATOM 227 N N3 . DT B 1 6 ? -8.212 -6.582 21.945 1.00 35.22 ? 16 DT B N3 1 ATOM 228 C C4 . DT B 1 6 ? -9.305 -7.129 21.272 1.00 35.19 ? 16 DT B C4 1 ATOM 229 O O4 . DT B 1 6 ? -9.755 -8.261 21.521 1.00 35.75 ? 16 DT B O4 1 ATOM 230 C C5 . DT B 1 6 ? -9.845 -6.250 20.286 1.00 34.54 ? 16 DT B C5 1 ATOM 231 C C7 . DT B 1 6 ? -11.069 -6.691 19.460 1.00 35.04 ? 16 DT B C7 1 ATOM 232 C C6 . DT B 1 6 ? -9.329 -5.052 20.069 1.00 35.40 ? 16 DT B C6 1 HETATM 233 O O . HOH C 2 . ? -21.232 -3.456 -0.172 1.00 35.15 ? 18 HOH A O 1 HETATM 234 O O . HOH C 2 . ? -23.162 8.458 9.509 1.00 50.63 ? 20 HOH A O 1 HETATM 235 O O . HOH C 2 . ? -28.759 1.598 7.875 1.00 50.89 ? 22 HOH A O 1 HETATM 236 O O . HOH C 2 . ? -15.440 15.316 16.222 1.00 45.14 ? 26 HOH A O 1 HETATM 237 O O . HOH C 2 . ? -25.841 5.097 0.181 1.00 39.98 ? 27 HOH A O 1 HETATM 238 O O . HOH C 2 . ? -10.775 22.554 16.895 1.00 40.56 ? 29 HOH A O 1 HETATM 239 O O . HOH C 2 . ? -17.310 -1.871 0.771 1.00 52.34 ? 32 HOH A O 1 HETATM 240 O O . HOH C 2 . ? -16.020 6.028 12.874 1.00 29.77 ? 35 HOH A O 1 HETATM 241 O O . HOH C 2 . ? -18.955 14.237 16.161 1.00 47.77 ? 36 HOH A O 1 HETATM 242 O O . HOH C 2 . ? -15.250 20.311 10.595 1.00 43.30 ? 40 HOH A O 1 HETATM 243 O O . HOH C 2 . ? -23.478 3.370 10.940 1.00 39.08 ? 42 HOH A O 1 HETATM 244 O O . HOH C 2 . ? -22.970 12.593 8.636 1.00 33.04 ? 43 HOH A O 1 HETATM 245 O O . HOH C 2 . ? -12.114 14.835 14.999 1.00 47.45 ? 44 HOH A O 1 HETATM 246 O O . HOH C 2 . ? -26.854 4.183 4.972 1.00 43.02 ? 45 HOH A O 1 HETATM 247 O O . HOH C 2 . ? -18.556 16.533 12.215 1.00 33.56 ? 46 HOH A O 1 HETATM 248 O O . HOH C 2 . ? -3.343 23.766 14.685 1.00 27.60 ? 47 HOH A O 1 HETATM 249 O O . HOH C 2 . ? -17.359 6.638 4.249 1.00 32.18 ? 48 HOH A O 1 HETATM 250 O O . HOH C 2 . ? -23.750 12.594 3.218 1.00 33.92 ? 49 HOH A O 1 HETATM 251 O O . HOH C 2 . ? 0.354 17.069 11.975 1.00 39.81 ? 50 HOH A O 1 HETATM 252 O O . HOH C 2 . ? -6.336 14.296 13.141 1.00 36.69 ? 51 HOH A O 1 HETATM 253 O O . HOH C 2 . ? -10.533 10.089 13.401 1.00 27.59 ? 52 HOH A O 1 HETATM 254 O O . HOH C 2 . ? -17.850 3.092 3.321 1.00 36.97 ? 54 HOH A O 1 HETATM 255 O O . HOH C 2 . ? -22.756 -5.212 -1.641 1.00 49.66 ? 55 HOH A O 1 HETATM 256 O O . HOH C 2 . ? -22.547 14.607 12.005 1.00 46.24 ? 59 HOH A O 1 HETATM 257 O O . HOH C 2 . ? -20.929 5.502 11.282 1.00 42.87 ? 60 HOH A O 1 HETATM 258 O O . HOH C 2 . ? -29.300 2.014 5.513 1.00 53.25 ? 62 HOH A O 1 HETATM 259 O O . HOH C 2 . ? -23.203 -1.500 -4.104 1.00 50.08 ? 66 HOH A O 1 HETATM 260 O O . HOH C 2 . ? -19.479 12.317 13.395 1.00 38.19 ? 67 HOH A O 1 HETATM 261 O O . HOH C 2 . ? -26.487 10.768 2.206 1.00 44.51 ? 68 HOH A O 1 HETATM 262 O O . HOH C 2 . ? -22.955 -1.118 -1.468 1.00 46.89 ? 70 HOH A O 1 HETATM 263 O O . HOH C 2 . ? -20.971 12.771 2.449 1.00 49.99 ? 71 HOH A O 1 HETATM 264 O O . HOH C 2 . ? -13.461 18.741 14.701 1.00 40.76 ? 72 HOH A O 1 HETATM 265 O O . HOH C 2 . ? -22.194 14.953 15.091 1.00 50.76 ? 73 HOH A O 1 HETATM 266 O O . HOH D 2 . ? -4.501 1.877 16.635 1.00 47.74 ? 17 HOH B O 1 HETATM 267 O O . HOH D 2 . ? -15.884 2.262 16.205 1.00 48.65 ? 19 HOH B O 1 HETATM 268 O O . HOH D 2 . ? -12.872 -6.366 16.752 1.00 42.33 ? 21 HOH B O 1 HETATM 269 O O . HOH D 2 . ? 0.000 0.000 17.862 0.50 18.12 ? 23 HOH B O 1 HETATM 270 O O . HOH D 2 . ? -1.982 3.513 4.746 1.00 47.02 ? 24 HOH B O 1 HETATM 271 O O . HOH D 2 . ? -0.234 1.610 6.307 1.00 49.33 ? 25 HOH B O 1 HETATM 272 O O . HOH D 2 . ? 1.256 8.606 4.182 1.00 36.19 ? 28 HOH B O 1 HETATM 273 O O . HOH D 2 . ? 4.820 11.940 6.783 1.00 48.30 ? 30 HOH B O 1 HETATM 274 O O . HOH D 2 . ? 5.107 9.309 8.993 1.00 45.00 ? 31 HOH B O 1 HETATM 275 O O . HOH D 2 . ? -5.039 -5.112 18.345 1.00 43.06 ? 33 HOH B O 1 HETATM 276 O O . HOH D 2 . ? -3.583 -5.501 22.088 1.00 36.92 ? 34 HOH B O 1 HETATM 277 O O . HOH D 2 . ? -5.391 -3.350 16.036 1.00 38.19 ? 37 HOH B O 1 HETATM 278 O O . HOH D 2 . ? -3.101 5.221 13.143 1.00 53.22 ? 38 HOH B O 1 HETATM 279 O O . HOH D 2 . ? -10.166 2.652 18.015 1.00 49.39 ? 39 HOH B O 1 HETATM 280 O O . HOH D 2 . ? -12.758 -9.641 16.484 1.00 49.33 ? 41 HOH B O 1 HETATM 281 O O . HOH D 2 . ? -11.631 10.494 1.904 1.00 25.25 ? 53 HOH B O 1 HETATM 282 O O . HOH D 2 . ? -1.819 2.675 10.430 1.00 39.93 ? 56 HOH B O 1 HETATM 283 O O . HOH D 2 . ? 4.434 7.884 5.810 1.00 42.11 ? 57 HOH B O 1 HETATM 284 O O . HOH D 2 . ? 0.913 3.878 6.793 1.00 49.81 ? 58 HOH B O 1 HETATM 285 O O . HOH D 2 . ? -4.062 2.585 5.770 1.00 46.00 ? 61 HOH B O 1 HETATM 286 O O . HOH D 2 . ? -16.091 0.000 17.498 0.50 54.18 ? 63 HOH B O 1 HETATM 287 O O . HOH D 2 . ? 1.122 15.758 -1.255 1.00 43.34 ? 64 HOH B O 1 HETATM 288 O O . HOH D 2 . ? 3.523 13.357 0.588 1.00 51.19 ? 65 HOH B O 1 HETATM 289 O O . HOH D 2 . ? -12.182 12.749 0.986 1.00 41.83 ? 69 HOH B O 1 #