data_242D # _entry.id 242D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 242D pdb_0000242d 10.2210/pdb242d/pdb RCSB ZDFB51 ? ? WWPDB D_1000177635 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1996-09-19 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 242D _pdbx_database_status.recvd_initial_deposition_date 1996-06-20 _pdbx_database_status.deposit_site NDB _pdbx_database_status.process_site NDB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Peterson, M.R.' 1 'Harrop, S.J.' 2 'McSweeney, S.M.' 3 'Leonard, G.A.' 4 'Thompson, A.W.' 5 'Hunter, W.N.' 6 'Helliwell, J.R.' 7 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'MAD Phasing Strategies Explored with a Brominated Oligonucleotide Crystal at 1.65A Resolution.' 'J.Synchrotron Radiat.' 3 24 34 1996 JSYRES DK 0909-0495 1210 ? 16702655 10.1107/S0909049595013288 1 'Molecular Structure of a Left-Handed Double Helical DNA Fragment at Atomic Resolution' Nature 282 680 ? 1979 NATUAS UK 0028-0836 0006 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Peterson, M.R.' 1 ? primary 'Harrop, S.J.' 2 ? primary 'McSweeney, S.M.' 3 ? primary 'Leonard, G.A.' 4 ? primary 'Thompson, A.W.' 5 ? primary 'Hunter, W.N.' 6 ? primary 'Helliwell, J.R.' 7 ? 1 'Wang, A.H.-J.' 8 ? 1 'Quigley, G.J.' 9 ? 1 'Kolpak, F.J.' 10 ? 1 'Crawford, J.L.' 11 ? 1 'Van Boom, J.H.' 12 ? 1 'Van Der Marel, G.' 13 ? 1 'Rich, A.' 14 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*GP*CP*GP*(CBR)P*G)-3') ; 1889.101 2 ? ? ? ? 2 water nat water 18.015 61 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DC)(DG)(CBR)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGCGCG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DC n 1 4 DG n 1 5 CBR n 1 6 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CBR 'DNA linking' n "5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 Br N3 O7 P' 386.093 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DC 3 3 3 DC C A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 CBR 5 5 5 CBR C A . n A 1 6 DG 6 6 6 DG G A . n B 1 1 DC 1 7 7 DC C B . n B 1 2 DG 2 8 8 DG G B . n B 1 3 DC 3 9 9 DC C B . n B 1 4 DG 4 10 10 DG G B . n B 1 5 CBR 5 11 11 CBR C B . n B 1 6 DG 6 12 12 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 13 13 HOH HOH A . C 2 HOH 2 15 15 HOH HOH A . C 2 HOH 3 18 18 HOH HOH A . C 2 HOH 4 19 19 HOH HOH A . C 2 HOH 5 20 20 HOH HOH A . C 2 HOH 6 21 21 HOH HOH A . C 2 HOH 7 22 22 HOH HOH A . C 2 HOH 8 26 26 HOH HOH A . C 2 HOH 9 28 28 HOH HOH A . C 2 HOH 10 31 31 HOH HOH A . C 2 HOH 11 33 33 HOH HOH A . C 2 HOH 12 35 35 HOH HOH A . C 2 HOH 13 37 37 HOH HOH A . C 2 HOH 14 38 38 HOH HOH A . C 2 HOH 15 39 39 HOH HOH A . C 2 HOH 16 41 41 HOH HOH A . C 2 HOH 17 42 42 HOH HOH A . C 2 HOH 18 44 44 HOH HOH A . C 2 HOH 19 46 46 HOH HOH A . C 2 HOH 20 47 47 HOH HOH A . C 2 HOH 21 51 51 HOH HOH A . C 2 HOH 22 57 57 HOH HOH A . C 2 HOH 23 58 58 HOH HOH A . C 2 HOH 24 59 59 HOH HOH A . C 2 HOH 25 68 68 HOH HOH A . C 2 HOH 26 69 69 HOH HOH A . C 2 HOH 27 70 70 HOH HOH A . C 2 HOH 28 71 71 HOH HOH A . C 2 HOH 29 73 73 HOH HOH A . D 2 HOH 1 14 14 HOH HOH B . D 2 HOH 2 16 16 HOH HOH B . D 2 HOH 3 17 17 HOH HOH B . D 2 HOH 4 23 23 HOH HOH B . D 2 HOH 5 24 24 HOH HOH B . D 2 HOH 6 25 25 HOH HOH B . D 2 HOH 7 27 27 HOH HOH B . D 2 HOH 8 29 29 HOH HOH B . D 2 HOH 9 30 30 HOH HOH B . D 2 HOH 10 32 32 HOH HOH B . D 2 HOH 11 34 34 HOH HOH B . D 2 HOH 12 36 36 HOH HOH B . D 2 HOH 13 40 40 HOH HOH B . D 2 HOH 14 43 43 HOH HOH B . D 2 HOH 15 45 45 HOH HOH B . D 2 HOH 16 48 48 HOH HOH B . D 2 HOH 17 49 49 HOH HOH B . D 2 HOH 18 50 50 HOH HOH B . D 2 HOH 19 52 52 HOH HOH B . D 2 HOH 20 53 53 HOH HOH B . D 2 HOH 21 54 54 HOH HOH B . D 2 HOH 22 55 55 HOH HOH B . D 2 HOH 23 56 56 HOH HOH B . D 2 HOH 24 60 60 HOH HOH B . D 2 HOH 25 61 61 HOH HOH B . D 2 HOH 26 62 62 HOH HOH B . D 2 HOH 27 63 63 HOH HOH B . D 2 HOH 28 64 64 HOH HOH B . D 2 HOH 29 65 65 HOH HOH B . D 2 HOH 30 66 66 HOH HOH B . D 2 HOH 31 67 67 HOH HOH B . D 2 HOH 32 72 72 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MLPHARE phasing . ? 1 NUCLSQ refinement . ? 2 DENZO 'data reduction' . ? 3 CCP4 'data scaling' . ? 4 # _cell.entry_id 242D _cell.length_a 17.970 _cell.length_b 30.980 _cell.length_c 44.850 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 242D _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 242D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.65 _exptl_crystal.density_percent_sol 25.55 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.crystal_id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1993-09-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SRS BEAMLINE PX9.5' _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline PX9.5 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _refine.entry_id 242D _refine.ls_number_reflns_obs 3151 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.000 _refine.ls_d_res_high 1.650 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.17 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 240 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 61 _refine_hist.number_atoms_total 303 _refine_hist.d_res_high 1.650 _refine_hist.d_res_low 8.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function n_bond_d 1.413 0.010 ? ? 'X-RAY DIFFRACTION' ? n_angle_d 2.404 0.150 ? ? 'X-RAY DIFFRACTION' ? n_planar_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_angle_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_angle_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_bond_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_dihedral_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_impr_tor ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_d 1.542 0.010 ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_angle_d 3.045 0.150 ? ? 'X-RAY DIFFRACTION' ? n_plane_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_chiral_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_singtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? n_multtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? n_xhyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 242D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 242D _struct.title 'MAD PHASING STRATEGIES EXPLORED WITH A BROMINATED OLIGONUCLEOTIDE CRYSTAL AT 1.65 A RESOLUTION.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 242D _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'Z-DNA, DOUBLE HELIX, MODIFIED, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 242D _struct_ref.pdbx_db_accession 242D _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 242D A 1 ? 6 ? 242D 1 ? 6 ? 1 6 2 1 242D B 1 ? 6 ? 242D 7 ? 12 ? 7 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DG 4 "O3'" ? ? ? 1_555 A CBR 5 P ? ? A DG 4 A CBR 5 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale2 covale both ? A CBR 5 "O3'" ? ? ? 1_555 A DG 6 P ? ? A CBR 5 A DG 6 1_555 ? ? ? ? ? ? ? 1.598 ? ? covale3 covale both ? B DG 4 "O3'" ? ? ? 1_555 B CBR 5 P ? ? B DG 10 B CBR 11 1_555 ? ? ? ? ? ? ? 1.594 ? ? covale4 covale both ? B CBR 5 "O3'" ? ? ? 1_555 B DG 6 P ? ? B CBR 11 B DG 12 1_555 ? ? ? ? ? ? ? 1.610 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B CBR 5 N3 ? ? A DG 2 B CBR 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B CBR 5 O2 ? ? A DG 2 B CBR 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B CBR 5 N4 ? ? A DG 2 B CBR 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A CBR 5 N3 ? ? ? 1_555 B DG 2 N1 ? ? A CBR 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A CBR 5 N4 ? ? ? 1_555 B DG 2 O6 ? ? A CBR 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A CBR 5 O2 ? ? ? 1_555 B DG 2 N2 ? ? A CBR 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 43 ? ? O B HOH 72 ? ? 2.09 2 1 O A HOH 58 ? ? O B HOH 40 ? ? 2.18 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O4'" A DC 3 ? ? "C4'" A DC 3 ? ? 1.386 1.446 -0.060 0.010 N 2 1 "O4'" A DG 4 ? ? "C4'" A DG 4 ? ? 1.382 1.446 -0.064 0.010 N 3 1 "O4'" B DG 10 ? ? "C4'" B DG 10 ? ? 1.383 1.446 -0.063 0.010 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C6 A DG 2 ? ? N1 A DG 2 ? ? C2 A DG 2 ? ? 120.69 125.10 -4.41 0.60 N 2 1 C5 A DG 2 ? ? C6 A DG 2 ? ? N1 A DG 2 ? ? 115.15 111.50 3.65 0.50 N 3 1 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 111.01 108.30 2.71 0.30 N 4 1 C2 A DC 3 ? ? N3 A DC 3 ? ? C4 A DC 3 ? ? 123.05 119.90 3.15 0.50 N 5 1 N3 A DC 3 ? ? C4 A DC 3 ? ? C5 A DC 3 ? ? 119.27 121.90 -2.63 0.40 N 6 1 "O5'" A DG 4 ? ? "C5'" A DG 4 ? ? "C4'" A DG 4 ? ? 103.26 109.40 -6.14 0.80 N 7 1 C5 A DG 4 ? ? C6 A DG 4 ? ? N1 A DG 4 ? ? 114.88 111.50 3.38 0.50 N 8 1 "O5'" A DG 6 ? ? "C5'" A DG 6 ? ? "C4'" A DG 6 ? ? 103.65 109.40 -5.75 0.80 N 9 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.33 108.30 3.03 0.30 N 10 1 C6 A DG 6 ? ? N1 A DG 6 ? ? C2 A DG 6 ? ? 121.44 125.10 -3.66 0.60 N 11 1 C5 A DG 6 ? ? C6 A DG 6 ? ? N1 A DG 6 ? ? 114.71 111.50 3.21 0.50 N 12 1 "O4'" B DC 7 ? ? "C1'" B DC 7 ? ? "C2'" B DC 7 ? ? 100.87 105.90 -5.03 0.80 N 13 1 "O4'" B DC 7 ? ? "C1'" B DC 7 ? ? N1 B DC 7 ? ? 110.17 108.30 1.87 0.30 N 14 1 C2 B DC 7 ? ? N3 B DC 7 ? ? C4 B DC 7 ? ? 123.44 119.90 3.54 0.50 N 15 1 N3 B DC 7 ? ? C4 B DC 7 ? ? C5 B DC 7 ? ? 118.85 121.90 -3.05 0.40 N 16 1 "O4'" B DG 8 ? ? "C1'" B DG 8 ? ? N9 B DG 8 ? ? 110.40 108.30 2.10 0.30 N 17 1 C6 B DG 8 ? ? N1 B DG 8 ? ? C2 B DG 8 ? ? 120.68 125.10 -4.42 0.60 N 18 1 C5 B DG 8 ? ? C6 B DG 8 ? ? N1 B DG 8 ? ? 115.61 111.50 4.11 0.50 N 19 1 C5 B DG 8 ? ? C6 B DG 8 ? ? O6 B DG 8 ? ? 124.77 128.60 -3.83 0.60 N 20 1 OP1 B DC 9 ? ? P B DC 9 ? ? OP2 B DC 9 ? ? 109.67 119.60 -9.93 1.50 N 21 1 "O4'" B DC 9 ? ? "C1'" B DC 9 ? ? N1 B DC 9 ? ? 110.93 108.30 2.63 0.30 N 22 1 C2 B DC 9 ? ? N3 B DC 9 ? ? C4 B DC 9 ? ? 123.18 119.90 3.28 0.50 N 23 1 N3 B DC 9 ? ? C4 B DC 9 ? ? C5 B DC 9 ? ? 119.35 121.90 -2.55 0.40 N 24 1 C6 B DG 10 ? ? N1 B DG 10 ? ? C2 B DG 10 ? ? 121.39 125.10 -3.71 0.60 N 25 1 C5 B DG 10 ? ? C6 B DG 10 ? ? N1 B DG 10 ? ? 114.91 111.50 3.41 0.50 N 26 1 C6 B DG 12 ? ? N1 B DG 12 ? ? C2 B DG 12 ? ? 120.70 125.10 -4.40 0.60 N 27 1 C5 B DG 12 ? ? C6 B DG 12 ? ? N1 B DG 12 ? ? 114.92 111.50 3.42 0.50 N # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A CBR 5 A CBR 5 ? DC ? 2 B CBR 5 B CBR 11 ? DC ? # loop_ _refine_B_iso.class _refine_B_iso.details _refine_B_iso.treatment _refine_B_iso.pdbx_refine_id 'ALL ATOMS' TR isotropic 'X-RAY DIFFRACTION' 'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION' # loop_ _refine_occupancy.class _refine_occupancy.treatment _refine_occupancy.pdbx_refine_id 'ALL ATOMS' fix 'X-RAY DIFFRACTION' 'ALL WATERS' fix 'X-RAY DIFFRACTION' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CBR BR BR N N 1 CBR P P N N 2 CBR OP1 O N N 3 CBR OP2 O N N 4 CBR "O5'" O N N 5 CBR N1 N N N 6 CBR C6 C N N 7 CBR C2 C N N 8 CBR O2 O N N 9 CBR N3 N N N 10 CBR C4 C N N 11 CBR N4 N N N 12 CBR C5 C N N 13 CBR "C2'" C N N 14 CBR "C5'" C N N 15 CBR "C4'" C N R 16 CBR "O4'" O N N 17 CBR "C1'" C N R 18 CBR "C3'" C N S 19 CBR "O3'" O N N 20 CBR OP3 O N N 21 CBR HOP2 H N N 22 CBR H6 H N N 23 CBR H41 H N N 24 CBR H42 H N N 25 CBR "H2'" H N N 26 CBR "H2''" H N N 27 CBR "H5'" H N N 28 CBR "H5''" H N N 29 CBR "H4'" H N N 30 CBR "H1'" H N N 31 CBR "H3'" H N N 32 CBR "HO3'" H N N 33 CBR HOP3 H N N 34 DC OP3 O N N 35 DC P P N N 36 DC OP1 O N N 37 DC OP2 O N N 38 DC "O5'" O N N 39 DC "C5'" C N N 40 DC "C4'" C N R 41 DC "O4'" O N N 42 DC "C3'" C N S 43 DC "O3'" O N N 44 DC "C2'" C N N 45 DC "C1'" C N R 46 DC N1 N N N 47 DC C2 C N N 48 DC O2 O N N 49 DC N3 N N N 50 DC C4 C N N 51 DC N4 N N N 52 DC C5 C N N 53 DC C6 C N N 54 DC HOP3 H N N 55 DC HOP2 H N N 56 DC "H5'" H N N 57 DC "H5''" H N N 58 DC "H4'" H N N 59 DC "H3'" H N N 60 DC "HO3'" H N N 61 DC "H2'" H N N 62 DC "H2''" H N N 63 DC "H1'" H N N 64 DC H41 H N N 65 DC H42 H N N 66 DC H5 H N N 67 DC H6 H N N 68 DG OP3 O N N 69 DG P P N N 70 DG OP1 O N N 71 DG OP2 O N N 72 DG "O5'" O N N 73 DG "C5'" C N N 74 DG "C4'" C N R 75 DG "O4'" O N N 76 DG "C3'" C N S 77 DG "O3'" O N N 78 DG "C2'" C N N 79 DG "C1'" C N R 80 DG N9 N Y N 81 DG C8 C Y N 82 DG N7 N Y N 83 DG C5 C Y N 84 DG C6 C N N 85 DG O6 O N N 86 DG N1 N N N 87 DG C2 C N N 88 DG N2 N N N 89 DG N3 N N N 90 DG C4 C Y N 91 DG HOP3 H N N 92 DG HOP2 H N N 93 DG "H5'" H N N 94 DG "H5''" H N N 95 DG "H4'" H N N 96 DG "H3'" H N N 97 DG "HO3'" H N N 98 DG "H2'" H N N 99 DG "H2''" H N N 100 DG "H1'" H N N 101 DG H8 H N N 102 DG H1 H N N 103 DG H21 H N N 104 DG H22 H N N 105 HOH O O N N 106 HOH H1 H N N 107 HOH H2 H N N 108 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal CBR BR C5 sing N N 1 CBR P OP1 doub N N 2 CBR P OP2 sing N N 3 CBR P "O5'" sing N N 4 CBR P OP3 sing N N 5 CBR OP2 HOP2 sing N N 6 CBR "O5'" "C5'" sing N N 7 CBR N1 C6 sing N N 8 CBR N1 C2 sing N N 9 CBR N1 "C1'" sing N N 10 CBR C6 C5 doub N N 11 CBR C6 H6 sing N N 12 CBR C2 O2 doub N N 13 CBR C2 N3 sing N N 14 CBR N3 C4 doub N N 15 CBR C4 N4 sing N N 16 CBR C4 C5 sing N N 17 CBR N4 H41 sing N N 18 CBR N4 H42 sing N N 19 CBR "C2'" "C1'" sing N N 20 CBR "C2'" "C3'" sing N N 21 CBR "C2'" "H2'" sing N N 22 CBR "C2'" "H2''" sing N N 23 CBR "C5'" "C4'" sing N N 24 CBR "C5'" "H5'" sing N N 25 CBR "C5'" "H5''" sing N N 26 CBR "C4'" "O4'" sing N N 27 CBR "C4'" "C3'" sing N N 28 CBR "C4'" "H4'" sing N N 29 CBR "O4'" "C1'" sing N N 30 CBR "C1'" "H1'" sing N N 31 CBR "C3'" "O3'" sing N N 32 CBR "C3'" "H3'" sing N N 33 CBR "O3'" "HO3'" sing N N 34 CBR OP3 HOP3 sing N N 35 DC OP3 P sing N N 36 DC OP3 HOP3 sing N N 37 DC P OP1 doub N N 38 DC P OP2 sing N N 39 DC P "O5'" sing N N 40 DC OP2 HOP2 sing N N 41 DC "O5'" "C5'" sing N N 42 DC "C5'" "C4'" sing N N 43 DC "C5'" "H5'" sing N N 44 DC "C5'" "H5''" sing N N 45 DC "C4'" "O4'" sing N N 46 DC "C4'" "C3'" sing N N 47 DC "C4'" "H4'" sing N N 48 DC "O4'" "C1'" sing N N 49 DC "C3'" "O3'" sing N N 50 DC "C3'" "C2'" sing N N 51 DC "C3'" "H3'" sing N N 52 DC "O3'" "HO3'" sing N N 53 DC "C2'" "C1'" sing N N 54 DC "C2'" "H2'" sing N N 55 DC "C2'" "H2''" sing N N 56 DC "C1'" N1 sing N N 57 DC "C1'" "H1'" sing N N 58 DC N1 C2 sing N N 59 DC N1 C6 sing N N 60 DC C2 O2 doub N N 61 DC C2 N3 sing N N 62 DC N3 C4 doub N N 63 DC C4 N4 sing N N 64 DC C4 C5 sing N N 65 DC N4 H41 sing N N 66 DC N4 H42 sing N N 67 DC C5 C6 doub N N 68 DC C5 H5 sing N N 69 DC C6 H6 sing N N 70 DG OP3 P sing N N 71 DG OP3 HOP3 sing N N 72 DG P OP1 doub N N 73 DG P OP2 sing N N 74 DG P "O5'" sing N N 75 DG OP2 HOP2 sing N N 76 DG "O5'" "C5'" sing N N 77 DG "C5'" "C4'" sing N N 78 DG "C5'" "H5'" sing N N 79 DG "C5'" "H5''" sing N N 80 DG "C4'" "O4'" sing N N 81 DG "C4'" "C3'" sing N N 82 DG "C4'" "H4'" sing N N 83 DG "O4'" "C1'" sing N N 84 DG "C3'" "O3'" sing N N 85 DG "C3'" "C2'" sing N N 86 DG "C3'" "H3'" sing N N 87 DG "O3'" "HO3'" sing N N 88 DG "C2'" "C1'" sing N N 89 DG "C2'" "H2'" sing N N 90 DG "C2'" "H2''" sing N N 91 DG "C1'" N9 sing N N 92 DG "C1'" "H1'" sing N N 93 DG N9 C8 sing Y N 94 DG N9 C4 sing Y N 95 DG C8 N7 doub Y N 96 DG C8 H8 sing N N 97 DG N7 C5 sing Y N 98 DG C5 C6 sing N N 99 DG C5 C4 doub Y N 100 DG C6 O6 doub N N 101 DG C6 N1 sing N N 102 DG N1 C2 sing N N 103 DG N1 H1 sing N N 104 DG C2 N2 sing N N 105 DG C2 N3 doub N N 106 DG N2 H21 sing N N 107 DG N2 H22 sing N N 108 DG N3 C4 sing N N 109 HOH O H1 sing N N 110 HOH O H2 sing N N 111 # _ndb_struct_conf_na.entry_id 242D _ndb_struct_conf_na.feature 'z-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 6 1_555 -0.245 -0.194 -0.009 2.517 1.802 1.868 1 A_DC1:DG12_B A 1 ? B 12 ? 19 1 1 A DG 2 1_555 B CBR 5 1_555 0.389 -0.083 0.102 -5.785 -1.931 2.302 2 A_DG2:CBR11_B A 2 ? B 11 ? 19 1 1 A DC 3 1_555 B DG 4 1_555 -0.373 -0.145 0.131 1.803 -0.769 2.632 3 A_DC3:DG10_B A 3 ? B 10 ? 19 1 1 A DG 4 1_555 B DC 3 1_555 0.166 -0.160 0.181 -1.406 5.014 3.264 4 A_DG4:DC9_B A 4 ? B 9 ? 19 1 1 A CBR 5 1_555 B DG 2 1_555 -0.390 -0.133 0.046 6.172 -2.527 1.046 5 A_CBR5:DG8_B A 5 ? B 8 ? 19 1 1 A DG 6 1_555 B DC 1 1_555 0.264 -0.055 0.043 -5.825 -1.635 1.046 6 A_DG6:DC7_B A 6 ? B 7 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 6 1_555 A DG 2 1_555 B CBR 5 1_555 -0.125 5.352 3.734 -1.216 -3.647 -5.828 -21.476 -8.527 5.890 31.712 -10.578 -6.981 1 AA_DC1DG2:CBR11DG12_BB A 1 ? B 12 ? A 2 ? B 11 ? 1 A DG 2 1_555 B CBR 5 1_555 A DC 3 1_555 B DG 4 1_555 0.187 -1.012 3.316 -0.226 -4.233 -51.624 1.444 0.199 3.230 4.851 -0.259 -51.786 2 AA_DG2DC3:DG10CBR11_BB A 2 ? B 11 ? A 3 ? B 10 ? 1 A DC 3 1_555 B DG 4 1_555 A DG 4 1_555 B DC 3 1_555 0.119 5.384 3.700 -0.013 -1.798 -9.089 -28.266 0.699 4.672 11.200 -0.079 -9.265 3 AA_DC3DG4:DC9DG10_BB A 3 ? B 10 ? A 4 ? B 9 ? 1 A DG 4 1_555 B DC 3 1_555 A CBR 5 1_555 B DG 2 1_555 -0.458 -0.950 3.370 1.680 -1.982 -50.888 1.246 -0.412 3.345 2.305 1.953 -50.950 4 AA_DG4CBR5:DG8DC9_BB A 4 ? B 9 ? A 5 ? B 8 ? 1 A CBR 5 1_555 B DG 2 1_555 A DG 6 1_555 B DC 1 1_555 0.181 5.576 3.762 -1.086 -2.162 -10.640 -24.826 -1.310 4.789 11.463 -5.760 -10.911 5 AA_CBR5DG6:DC7DG8_BB A 5 ? B 8 ? A 6 ? B 7 ? # _atom_sites.entry_id 242D _atom_sites.fract_transf_matrix[1][1] 0.055650 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.032280 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022300 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DC A 1 1 ? 19.816 17.580 18.416 1.00 8.33 ? 1 DC A "O5'" 1 ATOM 2 C "C5'" . DC A 1 1 ? 20.062 16.639 19.497 1.00 4.97 ? 1 DC A "C5'" 1 ATOM 3 C "C4'" . DC A 1 1 ? 18.870 15.729 19.555 1.00 8.41 ? 1 DC A "C4'" 1 ATOM 4 O "O4'" . DC A 1 1 ? 17.700 16.320 20.061 1.00 10.52 ? 1 DC A "O4'" 1 ATOM 5 C "C3'" . DC A 1 1 ? 18.446 14.955 18.313 1.00 5.35 ? 1 DC A "C3'" 1 ATOM 6 O "O3'" . DC A 1 1 ? 18.009 13.640 18.739 1.00 10.20 ? 1 DC A "O3'" 1 ATOM 7 C "C2'" . DC A 1 1 ? 17.207 15.750 17.829 1.00 5.57 ? 1 DC A "C2'" 1 ATOM 8 C "C1'" . DC A 1 1 ? 16.587 16.116 19.160 1.00 4.94 ? 1 DC A "C1'" 1 ATOM 9 N N1 . DC A 1 1 ? 15.781 17.338 19.102 1.00 7.41 ? 1 DC A N1 1 ATOM 10 C C2 . DC A 1 1 ? 14.398 17.187 18.932 1.00 8.36 ? 1 DC A C2 1 ATOM 11 O O2 . DC A 1 1 ? 13.904 16.072 18.793 1.00 7.86 ? 1 DC A O2 1 ATOM 12 N N3 . DC A 1 1 ? 13.640 18.316 18.882 1.00 3.88 ? 1 DC A N3 1 ATOM 13 C C4 . DC A 1 1 ? 14.174 19.564 19.008 1.00 3.42 ? 1 DC A C4 1 ATOM 14 N N4 . DC A 1 1 ? 13.372 20.619 18.977 1.00 6.75 ? 1 DC A N4 1 ATOM 15 C C5 . DC A 1 1 ? 15.585 19.712 19.223 1.00 10.70 ? 1 DC A C5 1 ATOM 16 C C6 . DC A 1 1 ? 16.322 18.582 19.254 1.00 6.53 ? 1 DC A C6 1 ATOM 17 P P . DG A 1 2 ? 19.021 12.389 18.667 1.00 12.93 ? 2 DG A P 1 ATOM 18 O OP1 . DG A 1 2 ? 19.717 12.525 17.381 1.00 14.90 ? 2 DG A OP1 1 ATOM 19 O OP2 . DG A 1 2 ? 18.219 11.130 18.793 1.00 14.52 ? 2 DG A OP2 1 ATOM 20 O "O5'" . DG A 1 2 ? 19.978 12.575 19.913 1.00 6.22 ? 2 DG A "O5'" 1 ATOM 21 C "C5'" . DG A 1 2 ? 19.503 12.532 21.245 1.00 5.89 ? 2 DG A "C5'" 1 ATOM 22 C "C4'" . DG A 1 2 ? 20.700 12.850 22.128 1.00 7.45 ? 2 DG A "C4'" 1 ATOM 23 O "O4'" . DG A 1 2 ? 21.078 14.178 21.855 1.00 7.64 ? 2 DG A "O4'" 1 ATOM 24 C "C3'" . DG A 1 2 ? 20.317 12.782 23.612 1.00 4.00 ? 2 DG A "C3'" 1 ATOM 25 O "O3'" . DG A 1 2 ? 20.744 11.566 24.222 1.00 14.03 ? 2 DG A "O3'" 1 ATOM 26 C "C2'" . DG A 1 2 ? 20.958 14.002 24.231 1.00 8.48 ? 2 DG A "C2'" 1 ATOM 27 C "C1'" . DG A 1 2 ? 21.357 14.865 23.092 1.00 8.60 ? 2 DG A "C1'" 1 ATOM 28 N N9 . DG A 1 2 ? 20.630 16.140 23.078 1.00 5.85 ? 2 DG A N9 1 ATOM 29 C C8 . DG A 1 2 ? 21.211 17.391 23.034 1.00 4.82 ? 2 DG A C8 1 ATOM 30 N N7 . DG A 1 2 ? 20.339 18.363 22.975 1.00 9.68 ? 2 DG A N7 1 ATOM 31 C C5 . DG A 1 2 ? 19.104 17.710 22.984 1.00 8.43 ? 2 DG A C5 1 ATOM 32 C C6 . DG A 1 2 ? 17.777 18.223 22.926 1.00 7.11 ? 2 DG A C6 1 ATOM 33 O O6 . DG A 1 2 ? 17.453 19.418 22.863 1.00 7.77 ? 2 DG A O6 1 ATOM 34 N N1 . DG A 1 2 ? 16.783 17.273 22.917 1.00 7.16 ? 2 DG A N1 1 ATOM 35 C C2 . DG A 1 2 ? 17.092 15.933 22.957 1.00 3.97 ? 2 DG A C2 1 ATOM 36 N N2 . DG A 1 2 ? 16.040 15.110 22.957 1.00 2.01 ? 2 DG A N2 1 ATOM 37 N N3 . DG A 1 2 ? 18.314 15.398 23.020 1.00 5.77 ? 2 DG A N3 1 ATOM 38 C C4 . DG A 1 2 ? 19.278 16.348 23.029 1.00 6.60 ? 2 DG A C4 1 ATOM 39 P P . DC A 1 3 ? 19.729 10.461 24.773 1.00 30.82 ? 3 DC A P 1 ATOM 40 O OP1 . DC A 1 3 ? 20.495 9.288 25.324 1.00 22.31 ? 3 DC A OP1 1 ATOM 41 O OP2 . DC A 1 3 ? 18.922 10.059 23.572 1.00 27.12 ? 3 DC A OP2 1 ATOM 42 O "O5'" . DC A 1 3 ? 18.836 11.185 25.876 1.00 10.58 ? 3 DC A "O5'" 1 ATOM 43 C "C5'" . DC A 1 3 ? 18.136 10.384 26.858 1.00 8.42 ? 3 DC A "C5'" 1 ATOM 44 C "C4'" . DC A 1 3 ? 16.738 10.932 27.006 1.00 6.42 ? 3 DC A "C4'" 1 ATOM 45 O "O4'" . DC A 1 3 ? 16.750 12.222 27.512 1.00 5.98 ? 3 DC A "O4'" 1 ATOM 46 C "C3'" . DC A 1 3 ? 15.864 10.935 25.764 1.00 3.62 ? 3 DC A "C3'" 1 ATOM 47 O "O3'" . DC A 1 3 ? 14.562 10.421 25.997 1.00 11.16 ? 3 DC A "O3'" 1 ATOM 48 C "C2'" . DC A 1 3 ? 15.840 12.411 25.365 1.00 2.83 ? 3 DC A "C2'" 1 ATOM 49 C "C1'" . DC A 1 3 ? 15.939 13.089 26.719 1.00 3.47 ? 3 DC A "C1'" 1 ATOM 50 N N1 . DC A 1 3 ? 16.549 14.429 26.607 1.00 3.52 ? 3 DC A N1 1 ATOM 51 C C2 . DC A 1 3 ? 15.671 15.512 26.468 1.00 2.00 ? 3 DC A C2 1 ATOM 52 O O2 . DC A 1 3 ? 14.461 15.326 26.441 1.00 4.52 ? 3 DC A O2 1 ATOM 53 N N3 . DC A 1 3 ? 16.214 16.744 26.373 1.00 4.51 ? 3 DC A N3 1 ATOM 54 C C4 . DC A 1 3 ? 17.552 16.967 26.400 1.00 4.55 ? 3 DC A C4 1 ATOM 55 N N4 . DC A 1 3 ? 18.050 18.199 26.302 1.00 7.78 ? 3 DC A N4 1 ATOM 56 C C5 . DC A 1 3 ? 18.444 15.856 26.535 1.00 7.81 ? 3 DC A C5 1 ATOM 57 C C6 . DC A 1 3 ? 17.892 14.636 26.651 1.00 6.90 ? 3 DC A C6 1 ATOM 58 P P . DG A 1 4 ? 14.156 8.873 25.849 1.00 12.45 ? 4 DG A P 1 ATOM 59 O OP1 . DG A 1 4 ? 14.907 8.344 24.674 1.00 9.36 ? 4 DG A OP1 1 ATOM 60 O OP2 . DG A 1 4 ? 12.669 8.790 25.670 1.00 13.35 ? 4 DG A OP2 1 ATOM 61 O "O5'" . DG A 1 4 ? 14.629 8.227 27.212 1.00 6.01 ? 4 DG A "O5'" 1 ATOM 62 C "C5'" . DG A 1 4 ? 14.161 8.737 28.485 1.00 3.56 ? 4 DG A "C5'" 1 ATOM 63 C "C4'" . DG A 1 4 ? 14.940 7.914 29.498 1.00 5.36 ? 4 DG A "C4'" 1 ATOM 64 O "O4'" . DG A 1 4 ? 16.299 8.124 29.364 1.00 6.41 ? 4 DG A "O4'" 1 ATOM 65 C "C3'" . DG A 1 4 ? 14.575 8.193 30.946 1.00 4.79 ? 4 DG A "C3'" 1 ATOM 66 O "O3'" . DG A 1 4 ? 13.553 7.310 31.412 1.00 6.80 ? 4 DG A "O3'" 1 ATOM 67 C "C2'" . DG A 1 4 ? 15.873 8.158 31.699 1.00 4.48 ? 4 DG A "C2'" 1 ATOM 68 C "C1'" . DG A 1 4 ? 16.932 8.301 30.664 1.00 4.74 ? 4 DG A "C1'" 1 ATOM 69 N N9 . DG A 1 4 ? 17.694 9.557 30.664 1.00 3.48 ? 4 DG A N9 1 ATOM 70 C C8 . DG A 1 4 ? 19.050 9.694 30.695 1.00 9.36 ? 4 DG A C8 1 ATOM 71 N N7 . DG A 1 4 ? 19.469 10.919 30.632 1.00 5.61 ? 4 DG A N7 1 ATOM 72 C C5 . DG A 1 4 ? 18.288 11.671 30.538 1.00 4.76 ? 4 DG A C5 1 ATOM 73 C C6 . DG A 1 4 ? 18.084 13.073 30.435 1.00 2.89 ? 4 DG A C6 1 ATOM 74 O O6 . DG A 1 4 ? 18.949 13.965 30.399 1.00 8.04 ? 4 DG A O6 1 ATOM 75 N N1 . DG A 1 4 ? 16.772 13.460 30.350 1.00 2.57 ? 4 DG A N1 1 ATOM 76 C C2 . DG A 1 4 ? 15.747 12.541 30.354 1.00 5.18 ? 4 DG A C2 1 ATOM 77 N N2 . DG A 1 4 ? 14.528 13.070 30.242 1.00 2.00 ? 4 DG A N2 1 ATOM 78 N N3 . DG A 1 4 ? 15.891 11.210 30.453 1.00 5.00 ? 4 DG A N3 1 ATOM 79 C C4 . DG A 1 4 ? 17.189 10.848 30.547 1.00 5.49 ? 4 DG A C4 1 HETATM 80 BR BR . CBR A 1 5 ? 17.989 9.892 34.438 1.00 13.18 ? 5 CBR A BR 1 HETATM 81 P P . CBR A 1 5 ? 12.146 7.874 31.928 1.00 12.62 ? 5 CBR A P 1 HETATM 82 O OP1 . CBR A 1 5 ? 11.416 6.602 32.300 1.00 14.16 ? 5 CBR A OP1 1 HETATM 83 O OP2 . CBR A 1 5 ? 11.345 8.654 30.955 1.00 9.77 ? 5 CBR A OP2 1 HETATM 84 O "O5'" . CBR A 1 5 ? 12.550 8.756 33.201 1.00 6.00 ? 5 CBR A "O5'" 1 HETATM 85 N N1 . CBR A 1 5 ? 14.683 12.241 34.255 1.00 4.09 ? 5 CBR A N1 1 HETATM 86 C C6 . CBR A 1 5 ? 15.522 11.167 34.358 1.00 3.55 ? 5 CBR A C6 1 HETATM 87 C C2 . CBR A 1 5 ? 15.202 13.513 34.021 1.00 3.53 ? 5 CBR A C2 1 HETATM 88 O O2 . CBR A 1 5 ? 14.438 14.488 33.932 1.00 6.06 ? 5 CBR A O2 1 HETATM 89 N N3 . CBR A 1 5 ? 16.542 13.621 33.891 1.00 4.43 ? 5 CBR A N3 1 HETATM 90 C C4 . CBR A 1 5 ? 17.390 12.569 33.999 1.00 4.73 ? 5 CBR A C4 1 HETATM 91 N N4 . CBR A 1 5 ? 18.705 12.770 33.883 1.00 5.28 ? 5 CBR A N4 1 HETATM 92 C C5 . CBR A 1 5 ? 16.858 11.272 34.241 1.00 6.21 ? 5 CBR A C5 1 HETATM 93 C "C2'" . CBR A 1 5 ? 12.543 12.049 33.035 1.00 5.50 ? 5 CBR A "C2'" 1 HETATM 94 C "C5'" . CBR A 1 5 ? 11.585 8.982 34.259 1.00 2.91 ? 5 CBR A "C5'" 1 HETATM 95 C "C4'" . CBR A 1 5 ? 11.612 10.446 34.559 1.00 3.70 ? 5 CBR A "C4'" 1 HETATM 96 O "O4'" . CBR A 1 5 ? 12.859 10.885 35.035 1.00 5.76 ? 5 CBR A "O4'" 1 HETATM 97 C "C1'" . CBR A 1 5 ? 13.226 12.123 34.389 1.00 4.82 ? 5 CBR A "C1'" 1 HETATM 98 C "C3'" . CBR A 1 5 ? 11.203 11.393 33.439 1.00 10.52 ? 5 CBR A "C3'" 1 HETATM 99 O "O3'" . CBR A 1 5 ? 10.301 12.396 33.959 1.00 5.21 ? 5 CBR A "O3'" 1 ATOM 100 P P . DG A 1 6 ? 8.726 12.262 33.726 1.00 10.95 ? 6 DG A P 1 ATOM 101 O OP1 . DG A 1 6 ? 8.526 11.727 32.363 1.00 14.16 ? 6 DG A OP1 1 ATOM 102 O OP2 . DG A 1 6 ? 8.125 13.615 33.923 1.00 18.82 ? 6 DG A OP2 1 ATOM 103 O "O5'" . DG A 1 6 ? 8.242 11.185 34.802 1.00 7.37 ? 6 DG A "O5'" 1 ATOM 104 C "C5'" . DG A 1 6 ? 7.933 11.569 36.137 1.00 3.06 ? 6 DG A "C5'" 1 ATOM 105 C "C4'" . DG A 1 6 ? 7.498 10.254 36.801 1.00 7.49 ? 6 DG A "C4'" 1 ATOM 106 O "O4'" . DG A 1 6 ? 8.580 9.359 36.711 1.00 7.27 ? 6 DG A "O4'" 1 ATOM 107 C "C3'" . DG A 1 6 ? 7.178 10.430 38.285 1.00 10.75 ? 6 DG A "C3'" 1 ATOM 108 O "O3'" . DG A 1 6 ? 6.147 9.533 38.706 1.00 8.06 ? 6 DG A "O3'" 1 ATOM 109 C "C2'" . DG A 1 6 ? 8.539 10.189 38.939 1.00 6.39 ? 6 DG A "C2'" 1 ATOM 110 C "C1'" . DG A 1 6 ? 9.089 9.121 38.020 1.00 5.72 ? 6 DG A "C1'" 1 ATOM 111 N N9 . DG A 1 6 ? 10.535 9.006 38.011 1.00 6.14 ? 6 DG A N9 1 ATOM 112 C C8 . DG A 1 6 ? 11.274 7.849 38.034 1.00 3.02 ? 6 DG A C8 1 ATOM 113 N N7 . DG A 1 6 ? 12.555 8.038 37.971 1.00 6.15 ? 6 DG A N7 1 ATOM 114 C C5 . DG A 1 6 ? 12.694 9.427 37.922 1.00 6.56 ? 6 DG A C5 1 ATOM 115 C C6 . DG A 1 6 ? 13.850 10.251 37.881 1.00 7.95 ? 6 DG A C6 1 ATOM 116 O O6 . DG A 1 6 ? 15.030 9.885 37.868 1.00 6.95 ? 6 DG A O6 1 ATOM 117 N N1 . DG A 1 6 ? 13.591 11.609 37.841 1.00 6.56 ? 6 DG A N1 1 ATOM 118 C C2 . DG A 1 6 ? 12.318 12.089 37.841 1.00 3.68 ? 6 DG A C2 1 ATOM 119 N N2 . DG A 1 6 ? 12.232 13.426 37.769 1.00 3.01 ? 6 DG A N2 1 ATOM 120 N N3 . DG A 1 6 ? 11.185 11.356 37.899 1.00 4.07 ? 6 DG A N3 1 ATOM 121 C C4 . DG A 1 6 ? 11.461 10.037 37.935 1.00 5.50 ? 6 DG A C4 1 ATOM 122 O "O5'" . DC B 1 1 ? 19.665 18.616 37.778 1.00 11.00 ? 7 DC B "O5'" 1 ATOM 123 C "C5'" . DC B 1 1 ? 19.048 19.424 36.729 1.00 6.05 ? 7 DC B "C5'" 1 ATOM 124 C "C4'" . DC B 1 1 ? 17.615 18.991 36.599 1.00 4.45 ? 7 DC B "C4'" 1 ATOM 125 O "O4'" . DC B 1 1 ? 17.451 17.672 36.151 1.00 5.53 ? 7 DC B "O4'" 1 ATOM 126 C "C3'" . DC B 1 1 ? 16.743 19.161 37.837 1.00 2.37 ? 7 DC B "C3'" 1 ATOM 127 O "O3'" . DC B 1 1 ? 15.484 19.740 37.491 1.00 6.04 ? 7 DC B "O3'" 1 ATOM 128 C "C2'" . DC B 1 1 ? 16.547 17.710 38.276 1.00 5.36 ? 7 DC B "C2'" 1 ATOM 129 C "C1'" . DC B 1 1 ? 16.407 17.007 36.909 1.00 4.71 ? 7 DC B "C1'" 1 ATOM 130 N N1 . DC B 1 1 ? 16.725 15.577 37.065 1.00 3.08 ? 7 DC B N1 1 ATOM 131 C C2 . DC B 1 1 ? 15.661 14.701 37.281 1.00 2.77 ? 7 DC B C2 1 ATOM 132 O O2 . DC B 1 1 ? 14.503 15.094 37.312 1.00 8.13 ? 7 DC B O2 1 ATOM 133 N N3 . DC B 1 1 ? 15.956 13.386 37.415 1.00 5.19 ? 7 DC B N3 1 ATOM 134 C C4 . DC B 1 1 ? 17.214 12.900 37.388 1.00 4.76 ? 7 DC B C4 1 ATOM 135 N N4 . DC B 1 1 ? 17.433 11.606 37.568 1.00 6.83 ? 7 DC B N4 1 ATOM 136 C C5 . DC B 1 1 ? 18.298 13.807 37.200 1.00 2.26 ? 7 DC B C5 1 ATOM 137 C C6 . DC B 1 1 ? 18.007 15.107 37.048 1.00 2.52 ? 7 DC B C6 1 ATOM 138 P P . DG B 1 2 ? 15.161 21.287 37.532 1.00 9.62 ? 8 DG B P 1 ATOM 139 O OP1 . DG B 1 2 ? 15.727 21.900 38.756 1.00 8.48 ? 8 DG B OP1 1 ATOM 140 O OP2 . DG B 1 2 ? 13.701 21.334 37.352 1.00 15.16 ? 8 DG B OP2 1 ATOM 141 O "O5'" . DG B 1 2 ? 15.943 21.891 36.241 1.00 5.09 ? 8 DG B "O5'" 1 ATOM 142 C "C5'" . DG B 1 2 ? 15.439 21.544 34.941 1.00 2.66 ? 8 DG B "C5'" 1 ATOM 143 C "C4'" . DG B 1 2 ? 16.367 22.210 33.950 1.00 3.29 ? 8 DG B "C4'" 1 ATOM 144 O "O4'" . DG B 1 2 ? 17.678 21.767 34.192 1.00 4.90 ? 8 DG B "O4'" 1 ATOM 145 C "C3'" . DG B 1 2 ? 16.058 21.962 32.493 1.00 2.73 ? 8 DG B "C3'" 1 ATOM 146 O "O3'" . DG B 1 2 ? 15.488 23.076 31.816 1.00 9.76 ? 8 DG B "O3'" 1 ATOM 147 C "C2'" . DG B 1 2 ? 17.336 21.504 31.856 1.00 4.82 ? 8 DG B "C2'" 1 ATOM 148 C "C1'" . DG B 1 2 ? 18.354 21.430 32.968 1.00 5.00 ? 8 DG B "C1'" 1 ATOM 149 N N9 . DG B 1 2 ? 18.946 20.083 33.062 1.00 3.46 ? 8 DG B N9 1 ATOM 150 C C8 . DG B 1 2 ? 20.262 19.740 33.147 1.00 13.72 ? 8 DG B C8 1 ATOM 151 N N7 . DG B 1 2 ? 20.468 18.452 33.246 1.00 7.53 ? 8 DG B N7 1 ATOM 152 C C5 . DG B 1 2 ? 19.194 17.905 33.264 1.00 5.61 ? 8 DG B C5 1 ATOM 153 C C6 . DG B 1 2 ? 18.751 16.558 33.376 1.00 5.09 ? 8 DG B C6 1 ATOM 154 O O6 . DG B 1 2 ? 19.499 15.574 33.492 1.00 7.55 ? 8 DG B O6 1 ATOM 155 N N1 . DG B 1 2 ? 17.390 16.379 33.376 1.00 7.03 ? 8 DG B N1 1 ATOM 156 C C2 . DG B 1 2 ? 16.542 17.453 33.259 1.00 4.27 ? 8 DG B C2 1 ATOM 157 N N2 . DG B 1 2 ? 15.233 17.174 33.268 1.00 2.71 ? 8 DG B N2 1 ATOM 158 N N3 . DG B 1 2 ? 16.901 18.746 33.170 1.00 4.16 ? 8 DG B N3 1 ATOM 159 C C4 . DG B 1 2 ? 18.239 18.895 33.179 1.00 4.13 ? 8 DG B C4 1 ATOM 160 P P . DC B 1 3 ? 14.012 23.166 31.273 1.00 16.07 ? 9 DC B P 1 ATOM 161 O OP1 . DC B 1 3 ? 13.737 24.447 30.543 1.00 13.57 ? 9 DC B OP1 1 ATOM 162 O OP2 . DC B 1 3 ? 13.167 23.101 32.520 1.00 16.16 ? 9 DC B OP2 1 ATOM 163 O "O5'" . DC B 1 3 ? 13.771 21.894 30.372 1.00 6.82 ? 9 DC B "O5'" 1 ATOM 164 C "C5'" . DC B 1 3 ? 12.766 21.872 29.346 1.00 9.02 ? 9 DC B "C5'" 1 ATOM 165 C "C4'" . DC B 1 3 ? 12.174 20.477 29.292 1.00 2.64 ? 9 DC B "C4'" 1 ATOM 166 O "O4'" . DC B 1 3 ? 13.149 19.585 28.803 1.00 6.47 ? 9 DC B "O4'" 1 ATOM 167 C "C3'" . DC B 1 3 ? 11.673 19.904 30.601 1.00 4.34 ? 9 DC B "C3'" 1 ATOM 168 O "O3'" . DC B 1 3 ? 10.504 19.099 30.417 1.00 7.29 ? 9 DC B "O3'" 1 ATOM 169 C "C2'" . DC B 1 3 ? 12.840 19.016 31.067 1.00 2.88 ? 9 DC B "C2'" 1 ATOM 170 C "C1'" . DC B 1 3 ? 13.314 18.474 29.713 1.00 6.09 ? 9 DC B "C1'" 1 ATOM 171 N N1 . DC B 1 3 ? 14.724 18.038 29.763 1.00 2.00 ? 9 DC B N1 1 ATOM 172 C C2 . DC B 1 3 ? 14.974 16.679 29.897 1.00 2.34 ? 9 DC B C2 1 ATOM 173 O O2 . DC B 1 3 ? 14.041 15.884 30.023 1.00 4.99 ? 9 DC B O2 1 ATOM 174 N N3 . DC B 1 3 ? 16.270 16.277 29.915 1.00 3.72 ? 9 DC B N3 1 ATOM 175 C C4 . DC B 1 3 ? 17.309 17.128 29.785 1.00 2.76 ? 9 DC B C4 1 ATOM 176 N N4 . DC B 1 3 ? 18.568 16.685 29.821 1.00 5.23 ? 9 DC B N4 1 ATOM 177 C C5 . DC B 1 3 ? 17.054 18.527 29.624 1.00 3.57 ? 9 DC B C5 1 ATOM 178 C C6 . DC B 1 3 ? 15.761 18.910 29.597 1.00 2.00 ? 9 DC B C6 1 ATOM 179 P P . DG B 1 4 ? 9.006 19.697 30.520 1.00 6.84 ? 10 DG B P 1 ATOM 180 O OP1 . DG B 1 4 ? 8.846 20.501 31.740 1.00 7.23 ? 10 DG B OP1 1 ATOM 181 O OP2 . DG B 1 4 ? 8.219 18.449 30.525 1.00 11.62 ? 10 DG B OP2 1 ATOM 182 O "O5'" . DG B 1 4 ? 8.828 20.576 29.211 1.00 3.58 ? 10 DG B "O5'" 1 ATOM 183 C "C5'" . DG B 1 4 ? 8.873 19.938 27.916 1.00 4.03 ? 10 DG B "C5'" 1 ATOM 184 C "C4'" . DG B 1 4 ? 8.837 21.027 26.867 1.00 4.18 ? 10 DG B "C4'" 1 ATOM 185 O "O4'" . DG B 1 4 ? 9.839 21.975 26.970 1.00 7.67 ? 10 DG B "O4'" 1 ATOM 186 C "C3'" . DG B 1 4 ? 8.839 20.486 25.441 1.00 2.00 ? 10 DG B "C3'" 1 ATOM 187 O "O3'" . DG B 1 4 ? 7.512 20.294 24.966 1.00 12.07 ? 10 DG B "O3'" 1 ATOM 188 C "C2'" . DG B 1 4 ? 9.618 21.507 24.643 1.00 4.70 ? 10 DG B "C2'" 1 ATOM 189 C "C1'" . DG B 1 4 ? 10.378 22.296 25.647 1.00 5.30 ? 10 DG B "C1'" 1 ATOM 190 N N9 . DG B 1 4 ? 11.822 22.070 25.661 1.00 5.67 ? 10 DG B N9 1 ATOM 191 C C8 . DG B 1 4 ? 12.798 23.030 25.647 1.00 8.66 ? 10 DG B C8 1 ATOM 192 N N7 . DG B 1 4 ? 14.019 22.556 25.719 1.00 7.75 ? 10 DG B N7 1 ATOM 193 C C5 . DG B 1 4 ? 13.832 21.185 25.777 1.00 5.56 ? 10 DG B C5 1 ATOM 194 C C6 . DG B 1 4 ? 14.769 20.118 25.898 1.00 9.98 ? 10 DG B C6 1 ATOM 195 O O6 . DG B 1 4 ? 16.008 20.238 25.966 1.00 6.94 ? 10 DG B O6 1 ATOM 196 N N1 . DG B 1 4 ? 14.210 18.858 25.961 1.00 2.92 ? 10 DG B N1 1 ATOM 197 C C2 . DG B 1 4 ? 12.863 18.678 25.921 1.00 5.49 ? 10 DG B C2 1 ATOM 198 N N2 . DG B 1 4 ? 12.442 17.403 26.010 1.00 6.47 ? 10 DG B N2 1 ATOM 199 N N3 . DG B 1 4 ? 11.926 19.644 25.836 1.00 4.40 ? 10 DG B N3 1 ATOM 200 C C4 . DG B 1 4 ? 12.489 20.867 25.768 1.00 6.31 ? 10 DG B C4 1 HETATM 201 BR BR . CBR B 1 5 ? 12.122 21.925 21.958 1.00 14.42 ? 11 CBR B BR 1 HETATM 202 P P . CBR B 1 5 ? 6.930 18.941 24.356 1.00 12.34 ? 11 CBR B P 1 HETATM 203 O OP1 . CBR B 1 5 ? 5.495 19.112 23.975 1.00 15.38 ? 11 CBR B OP1 1 HETATM 204 O OP2 . CBR B 1 5 ? 7.145 17.889 25.365 1.00 15.01 ? 11 CBR B OP2 1 HETATM 205 O "O5'" . CBR B 1 5 ? 7.852 18.759 23.047 1.00 8.44 ? 11 CBR B "O5'" 1 HETATM 206 N N1 . CBR B 1 5 ? 11.786 17.908 22.164 1.00 2.73 ? 11 CBR B N1 1 HETATM 207 C C6 . CBR B 1 5 ? 11.505 19.245 22.106 1.00 4.19 ? 11 CBR B C6 1 HETATM 208 C C2 . CBR B 1 5 ? 13.091 17.471 22.339 1.00 4.46 ? 11 CBR B C2 1 HETATM 209 O O2 . CBR B 1 5 ? 13.341 16.258 22.393 1.00 5.04 ? 11 CBR B O2 1 HETATM 210 N N3 . CBR B 1 5 ? 14.048 18.425 22.455 1.00 3.61 ? 11 CBR B N3 1 HETATM 211 C C4 . CBR B 1 5 ? 13.794 19.755 22.415 1.00 2.00 ? 11 CBR B C4 1 HETATM 212 N N4 . CBR B 1 5 ? 14.790 20.631 22.541 1.00 5.37 ? 11 CBR B N4 1 HETATM 213 C C5 . CBR B 1 5 ? 12.453 20.186 22.209 1.00 3.28 ? 11 CBR B C5 1 HETATM 214 C "C2'" . CBR B 1 5 ? 10.146 16.469 23.343 1.00 2.00 ? 11 CBR B "C2'" 1 HETATM 215 C "C5'" . CBR B 1 5 ? 7.356 17.905 21.980 1.00 7.34 ? 11 CBR B "C5'" 1 HETATM 216 C "C4'" . CBR B 1 5 ? 8.425 16.883 21.720 1.00 2.05 ? 11 CBR B "C4'" 1 HETATM 217 O "O4'" . CBR B 1 5 ? 9.627 17.434 21.272 1.00 7.50 ? 11 CBR B "O4'" 1 HETATM 218 C "C1'" . CBR B 1 5 ? 10.739 16.883 22.003 1.00 3.58 ? 11 CBR B "C1'" 1 HETATM 219 C "C3'" . CBR B 1 5 ? 8.781 15.949 22.877 1.00 4.98 ? 11 CBR B "C3'" 1 HETATM 220 O "O3'" . CBR B 1 5 ? 8.889 14.612 22.357 1.00 5.43 ? 11 CBR B "O3'" 1 ATOM 221 P P . DG B 1 6 ? 7.660 13.590 22.549 1.00 8.67 ? 12 DG B P 1 ATOM 222 O OP1 . DG B 1 6 ? 7.172 13.615 23.939 1.00 10.64 ? 12 DG B OP1 1 ATOM 223 O OP2 . DG B 1 6 ? 8.307 12.309 22.146 1.00 15.47 ? 12 DG B OP2 1 ATOM 224 O "O5'" . DG B 1 6 ? 6.538 14.036 21.509 1.00 5.75 ? 12 DG B "O5'" 1 ATOM 225 C "C5'" . DG B 1 6 ? 6.764 13.863 20.093 1.00 2.00 ? 12 DG B "C5'" 1 ATOM 226 C "C4'" . DG B 1 6 ? 5.577 14.519 19.425 1.00 5.78 ? 12 DG B "C4'" 1 ATOM 227 O "O4'" . DG B 1 6 ? 5.716 15.933 19.501 1.00 7.86 ? 12 DG B "O4'" 1 ATOM 228 C "C3'" . DG B 1 6 ? 5.443 14.191 17.932 1.00 6.47 ? 12 DG B "C3'" 1 ATOM 229 O "O3'" . DG B 1 6 ? 4.073 14.277 17.502 1.00 12.70 ? 12 DG B "O3'" 1 ATOM 230 C "C2'" . DG B 1 6 ? 6.309 15.289 17.309 1.00 3.82 ? 12 DG B "C2'" 1 ATOM 231 C "C1'" . DG B 1 6 ? 5.897 16.469 18.143 1.00 2.87 ? 12 DG B "C1'" 1 ATOM 232 N N9 . DG B 1 6 ? 6.868 17.555 18.188 1.00 5.33 ? 12 DG B N9 1 ATOM 233 C C8 . DG B 1 6 ? 6.559 18.907 18.205 1.00 9.80 ? 12 DG B C8 1 ATOM 234 N N7 . DG B 1 6 ? 7.609 19.694 18.304 1.00 12.09 ? 12 DG B N7 1 ATOM 235 C C5 . DG B 1 6 ? 8.679 18.799 18.376 1.00 6.70 ? 12 DG B C5 1 ATOM 236 C C6 . DG B 1 6 ? 10.074 19.034 18.506 1.00 5.41 ? 12 DG B C6 1 ATOM 237 O O6 . DG B 1 6 ? 10.642 20.133 18.600 1.00 8.84 ? 12 DG B O6 1 ATOM 238 N N1 . DG B 1 6 ? 10.855 17.895 18.546 1.00 5.26 ? 12 DG B N1 1 ATOM 239 C C2 . DG B 1 6 ? 10.286 16.657 18.470 1.00 6.13 ? 12 DG B C2 1 ATOM 240 N N2 . DG B 1 6 ? 11.153 15.636 18.551 1.00 5.37 ? 12 DG B N2 1 ATOM 241 N N3 . DG B 1 6 ? 8.976 16.385 18.349 1.00 5.08 ? 12 DG B N3 1 ATOM 242 C C4 . DG B 1 6 ? 8.237 17.496 18.304 1.00 3.27 ? 12 DG B C4 1 HETATM 243 O O . HOH C 2 . ? 20.682 16.769 15.955 1.00 10.23 ? 13 HOH A O 1 HETATM 244 O O . HOH C 2 . ? 8.350 7.543 34.954 1.00 12.68 ? 15 HOH A O 1 HETATM 245 O O . HOH C 2 . ? 12.020 11.241 29.485 1.00 13.42 ? 18 HOH A O 1 HETATM 246 O O . HOH C 2 . ? 11.896 5.305 34.515 1.00 24.78 ? 19 HOH A O 1 HETATM 247 O O . HOH C 2 . ? 15.815 12.132 21.626 1.00 17.15 ? 20 HOH A O 1 HETATM 248 O O . HOH C 2 . ? 15.208 23.157 19.165 1.00 19.27 ? 21 HOH A O 1 HETATM 249 O O . HOH C 2 . ? 9.556 14.803 36.828 1.00 16.29 ? 22 HOH A O 1 HETATM 250 O O . HOH C 2 . ? 14.001 6.178 36.438 1.00 32.49 ? 26 HOH A O 1 HETATM 251 O O . HOH C 2 . ? 21.163 20.025 18.927 1.00 13.30 ? 28 HOH A O 1 HETATM 252 O O . HOH C 2 . ? 21.565 11.668 34.779 1.00 28.86 ? 31 HOH A O 1 HETATM 253 O O . HOH C 2 . ? 22.081 10.436 16.538 1.00 23.56 ? 33 HOH A O 1 HETATM 254 O O . HOH C 2 . ? 8.659 8.982 31.973 1.00 21.70 ? 35 HOH A O 1 HETATM 255 O O . HOH C 2 . ? 13.392 5.289 39.697 1.00 34.33 ? 37 HOH A O 1 HETATM 256 O O . HOH C 2 . ? 20.909 20.767 21.532 1.00 23.52 ? 38 HOH A O 1 HETATM 257 O O . HOH C 2 . ? 21.287 18.545 26.279 1.00 26.65 ? 39 HOH A O 1 HETATM 258 O O . HOH C 2 . ? 17.890 7.184 24.437 1.00 33.46 ? 41 HOH A O 1 HETATM 259 O O . HOH C 2 . ? 14.346 14.188 16.686 1.00 23.77 ? 42 HOH A O 1 HETATM 260 O O . HOH C 2 . ? 10.063 13.172 30.206 1.00 22.68 ? 44 HOH A O 1 HETATM 261 O O . HOH C 2 . ? 12.771 13.881 24.522 1.00 27.68 ? 46 HOH A O 1 HETATM 262 O O . HOH C 2 . ? 10.452 7.546 28.472 1.00 24.11 ? 47 HOH A O 1 HETATM 263 O O . HOH C 2 . ? 11.493 10.990 27.028 1.00 25.75 ? 51 HOH A O 1 HETATM 264 O O . HOH C 2 . ? 18.230 21.229 20.566 1.00 22.57 ? 57 HOH A O 1 HETATM 265 O O . HOH C 2 . ? 14.145 12.946 18.806 1.00 37.27 ? 58 HOH A O 1 HETATM 266 O O . HOH C 2 . ? 18.383 21.526 24.388 1.00 30.19 ? 59 HOH A O 1 HETATM 267 O O . HOH C 2 . ? 21.750 8.911 28.041 1.00 30.20 ? 68 HOH A O 1 HETATM 268 O O . HOH C 2 . ? 18.732 12.894 14.866 1.00 38.16 ? 69 HOH A O 1 HETATM 269 O O . HOH C 2 . ? 17.989 8.892 20.564 1.00 35.24 ? 70 HOH A O 1 HETATM 270 O O . HOH C 2 . ? 21.301 13.856 27.960 1.00 36.08 ? 71 HOH A O 1 HETATM 271 O O . HOH C 2 . ? 12.629 4.107 31.502 1.00 36.51 ? 73 HOH A O 1 HETATM 272 O O . HOH D 2 . ? 9.567 16.543 26.584 1.00 9.13 ? 14 HOH B O 1 HETATM 273 O O . HOH D 2 . ? 17.851 22.194 39.755 1.00 11.01 ? 16 HOH B O 1 HETATM 274 O O . HOH D 2 . ? 12.899 18.827 34.649 1.00 14.23 ? 17 HOH B O 1 HETATM 275 O O . HOH D 2 . ? 17.248 21.832 27.826 1.00 19.78 ? 23 HOH B O 1 HETATM 276 O O . HOH D 2 . ? 21.243 15.682 35.900 1.00 21.22 ? 24 HOH B O 1 HETATM 277 O O . HOH D 2 . ? 15.911 23.333 22.137 1.00 18.84 ? 25 HOH B O 1 HETATM 278 O O . HOH D 2 . ? 12.279 16.450 35.658 1.00 23.48 ? 27 HOH B O 1 HETATM 279 O O . HOH D 2 . ? 19.712 20.090 40.118 1.00 20.09 ? 29 HOH B O 1 HETATM 280 O O . HOH D 2 . ? 10.380 12.625 19.564 1.00 19.24 ? 30 HOH B O 1 HETATM 281 O O . HOH D 2 . ? 6.264 11.235 24.876 1.00 40.72 ? 32 HOH B O 1 HETATM 282 O O . HOH D 2 . ? 9.711 22.727 18.631 1.00 30.49 ? 34 HOH B O 1 HETATM 283 O O . HOH D 2 . ? 16.322 23.732 24.890 1.00 28.34 ? 36 HOH B O 1 HETATM 284 O O . HOH D 2 . ? 13.361 13.671 20.702 1.00 15.23 ? 40 HOH B O 1 HETATM 285 O O . HOH D 2 . ? 11.146 22.850 34.241 1.00 17.28 ? 43 HOH B O 1 HETATM 286 O O . HOH D 2 . ? 22.239 13.424 37.257 1.00 28.99 ? 45 HOH B O 1 HETATM 287 O O . HOH D 2 . ? 11.622 15.574 31.408 1.00 24.88 ? 48 HOH B O 1 HETATM 288 O O . HOH D 2 . ? 5.862 15.497 25.329 1.00 21.62 ? 49 HOH B O 1 HETATM 289 O O . HOH D 2 . ? 11.874 14.698 28.149 1.00 21.89 ? 50 HOH B O 1 HETATM 290 O O . HOH D 2 . ? 20.857 18.616 29.014 1.00 22.76 ? 52 HOH B O 1 HETATM 291 O O . HOH D 2 . ? 14.828 20.362 41.114 1.00 29.31 ? 53 HOH B O 1 HETATM 292 O O . HOH D 2 . ? 9.094 16.230 29.193 1.00 22.94 ? 54 HOH B O 1 HETATM 293 O O . HOH D 2 . ? 10.837 23.844 17.094 1.00 39.97 ? 55 HOH B O 1 HETATM 294 O O . HOH D 2 . ? 8.375 12.956 28.059 1.00 41.15 ? 56 HOH B O 1 HETATM 295 O O . HOH D 2 . ? 21.716 14.683 31.672 1.00 26.74 ? 60 HOH B O 1 HETATM 296 O O . HOH D 2 . ? 9.567 13.794 26.297 1.00 35.30 ? 61 HOH B O 1 HETATM 297 O O . HOH D 2 . ? 9.094 18.743 34.438 1.00 33.73 ? 62 HOH B O 1 HETATM 298 O O . HOH D 2 . ? 6.937 10.006 21.231 1.00 27.30 ? 63 HOH B O 1 HETATM 299 O O . HOH D 2 . ? 11.680 19.495 38.357 1.00 26.48 ? 64 HOH B O 1 HETATM 300 O O . HOH D 2 . ? 7.289 21.925 16.542 1.00 35.39 ? 65 HOH B O 1 HETATM 301 O O . HOH D 2 . ? 12.674 25.299 34.331 1.00 36.32 ? 66 HOH B O 1 HETATM 302 O O . HOH D 2 . ? 20.587 11.445 37.213 1.00 28.06 ? 67 HOH B O 1 HETATM 303 O O . HOH D 2 . ? 12.149 23.083 36.061 1.00 36.50 ? 72 HOH B O 1 #