1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Loh, J.
Huang, Q.
Petros, A.M.
Nettesheim, D.
van Dyk, L.F.
Labrada, L.
Speck, S.H.
Levine, B.
Olejniczak, E.T.
Virgin, H.W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Plos Pathog.
1553-7366
1
e10
e10
10.1371/journal.ppat.0010010
16201011
A surface groove essential for viral Bcl-2 function during chronic infection in vivo.
2005
10.2210/pdb2abo/pdb
pdb_00002abo
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
15752.925
bcl-2 homolog
truncated Bcl-2 homolog
1
man
polymer
no
no
MSHKKSGTYWATLITAFLKTVSKVEELDCVDSAVLVDVSKIITLTQEFRRHYDSVYRADYGPALKNWKRDLSKLFTSLFV
DVINSGRIVGFFDVGRYVCEEVLCPGSWTEDHELLNDCMTHFFIENNLMNHFPLED
MSHKKSGTYWATLITAFLKTVSKVEELDCVDSAVLVDVSKIITLTQEFRRHYDSVYRADYGPALKNWKRDLSKLFTSLFV
DVINSGRIVGFFDVGRYVCEEVLCPGSWTEDHELLNDCMTHFFIENNLMNHFPLED
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Murine herpesvirus 68
Rhadinovirus
Escherichia
Escherichia coli
sample
gamma HV68
33708
Murid herpesvirus 4
469008
Escherichia coli BL21(DE3)
BL21 (DE3)
pET21d(+)
plasmid
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
1
0
2006-05-16
1
1
2008-04-30
1
2
2011-07-13
1
3
2022-03-09
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
RCSB
Y
RCSB
2005-07-15
REL
1
20mM Tris
7.8
ambient
303
K
simulated annealing
1
minimized average structure
.1 mM HV68-viral BCL2 U-15N, 13C, 20mM Tris; 90% H2O, 10% D2O
100% D2O
.5 mM HV68-viral BCL2 U-15N, 13C, 75% 2H ; 20mM Tris; 90% H2O, 10% D2O
90% H2O/10% D2O
brunger
refinement
CNS
800
Bruker
DRX
500
Bruker
DRX
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
SER
6
n
6
SER
6
A
GLY
7
n
7
GLY
7
A
THR
8
n
8
THR
8
A
TYR
9
n
9
TYR
9
A
TRP
10
n
10
TRP
10
A
ALA
11
n
11
ALA
11
A
THR
12
n
12
THR
12
A
LEU
13
n
13
LEU
13
A
ILE
14
n
14
ILE
14
A
THR
15
n
15
THR
15
A
ALA
16
n
16
ALA
16
A
PHE
17
n
17
PHE
17
A
LEU
18
n
18
LEU
18
A
LYS
19
n
19
LYS
19
A
THR
20
n
20
THR
20
A
VAL
21
n
21
VAL
21
A
SER
22
n
22
SER
22
A
LYS
23
n
23
LYS
23
A
VAL
24
n
24
VAL
24
A
GLU
25
n
25
GLU
25
A
GLU
26
n
26
GLU
26
A
LEU
27
n
27
LEU
27
A
ASP
28
n
28
ASP
28
A
CYS
29
n
29
CYS
29
A
VAL
30
n
30
VAL
30
A
ASP
31
n
31
ASP
31
A
SER
32
n
32
SER
32
A
ALA
33
n
33
ALA
33
A
VAL
34
n
34
VAL
34
A
LEU
35
n
35
LEU
35
A
VAL
36
n
36
VAL
36
A
ASP
37
n
37
ASP
37
A
VAL
38
n
38
VAL
38
A
SER
39
n
39
SER
39
A
LYS
40
n
40
LYS
40
A
ILE
41
n
41
ILE
41
A
ILE
42
n
42
ILE
42
A
THR
43
n
43
THR
43
A
LEU
44
n
44
LEU
44
A
THR
45
n
45
THR
45
A
GLN
46
n
46
GLN
46
A
GLU
47
n
47
GLU
47
A
PHE
48
n
48
PHE
48
A
ARG
49
n
49
ARG
49
A
ARG
50
n
50
ARG
50
A
HIS
51
n
51
HIS
51
A
TYR
52
n
52
TYR
52
A
ASP
53
n
53
ASP
53
A
SER
54
n
54
SER
54
A
VAL
55
n
55
VAL
55
A
TYR
56
n
56
TYR
56
A
ARG
57
n
57
ARG
57
A
ALA
58
n
58
ALA
58
A
ASP
59
n
59
ASP
59
A
TYR
60
n
60
TYR
60
A
GLY
61
n
61
GLY
61
A
PRO
62
n
62
PRO
62
A
ALA
63
n
63
ALA
63
A
LEU
64
n
64
LEU
64
A
LYS
65
n
65
LYS
65
A
ASN
66
n
66
ASN
66
A
TRP
67
n
67
TRP
67
A
LYS
68
n
68
LYS
68
A
ARG
69
n
69
ARG
69
A
ASP
70
n
70
ASP
70
A
LEU
71
n
71
LEU
71
A
SER
72
n
72
SER
72
A
LYS
73
n
73
LYS
73
A
LEU
74
n
74
LEU
74
A
PHE
75
n
75
PHE
75
A
THR
76
n
76
THR
76
A
SER
77
n
77
SER
77
A
LEU
78
n
78
LEU
78
A
PHE
79
n
79
PHE
79
A
VAL
80
n
80
VAL
80
A
ASP
81
n
81
ASP
81
A
VAL
82
n
82
VAL
82
A
ILE
83
n
83
ILE
83
A
ASN
84
n
84
ASN
84
A
SER
85
n
85
SER
85
A
GLY
86
n
86
GLY
86
A
ARG
87
n
87
ARG
87
A
ILE
88
n
88
ILE
88
A
VAL
89
n
89
VAL
89
A
GLY
90
n
90
GLY
90
A
PHE
91
n
91
PHE
91
A
PHE
92
n
92
PHE
92
A
ASP
93
n
93
ASP
93
A
VAL
94
n
94
VAL
94
A
GLY
95
n
95
GLY
95
A
ARG
96
n
96
ARG
96
A
TYR
97
n
97
TYR
97
A
VAL
98
n
98
VAL
98
A
CYS
99
n
99
CYS
99
A
GLU
100
n
100
GLU
100
A
GLU
101
n
101
GLU
101
A
VAL
102
n
102
VAL
102
A
LEU
103
n
103
LEU
103
A
CYS
104
n
104
CYS
104
A
PRO
105
n
105
PRO
105
A
GLY
106
n
106
GLY
106
A
SER
107
n
107
SER
107
A
TRP
108
n
108
TRP
108
A
THR
109
n
109
THR
109
A
GLU
110
n
110
GLU
110
A
ASP
111
n
111
ASP
111
A
HIS
112
n
112
HIS
112
A
GLU
113
n
113
GLU
113
A
LEU
114
n
114
LEU
114
A
LEU
115
n
115
LEU
115
A
ASN
116
n
116
ASN
116
A
ASP
117
n
117
ASP
117
A
CYS
118
n
118
CYS
118
A
MET
119
n
119
MET
119
A
THR
120
n
120
THR
120
A
HIS
121
n
121
HIS
121
A
PHE
122
n
122
PHE
122
A
PHE
123
n
123
PHE
123
A
ILE
124
n
124
ILE
124
A
GLU
125
n
125
GLU
125
A
ASN
126
n
126
ASN
126
A
ASN
127
n
127
ASN
127
A
LEU
128
n
128
LEU
128
A
MET
129
n
129
MET
129
A
ASN
130
n
130
ASN
130
A
HIS
131
n
131
HIS
131
A
PHE
132
n
132
PHE
132
A
PRO
133
n
133
PRO
133
A
LEU
134
n
134
LEU
134
A
GLU
135
n
135
GLU
135
A
ASP
136
n
136
ASP
136
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
MET
1
A
MET
1
1
Y
1
A
SER
2
A
SER
2
1
Y
1
A
HIS
3
A
HIS
3
1
Y
1
A
LYS
4
A
LYS
4
1
Y
1
A
LYS
5
A
LYS
5
1
Y
1
A
A
O
H
ASN
LEU
126
128
1.01
1
A
A
O
N
ASN
LEU
126
128
1.88
1
A
LYS
23
42.26
92.35
1
A
GLU
25
45.19
26.58
1
A
GLU
26
68.60
96.34
1
A
ASP
28
-98.43
53.75
1
A
CYS
29
-147.78
55.75
1
A
ALA
58
-39.16
-75.98
1
A
ASP
59
-157.71
49.67
1
A
TYR
60
-107.90
46.75
1
A
ASP
70
-150.01
62.47
1
A
ASP
81
-151.03
-54.62
1
A
GLU
101
177.92
-44.30
1
A
PRO
105
-73.43
-169.99
1
A
SER
107
-174.43
132.23
1
A
THR
109
-44.86
163.84
1
A
ASN
127
-20.43
5.08
1
A
MET
129
-38.85
-33.68
1
A
PRO
133
-39.05
94.80
1
A
LEU
134
-143.99
41.53
minimized average
NMR structure of gamma herpesvirus 68 a viral Bcl-2 homolog
1
N
N
A
THR
8
A
THR
8
HELX_P
A
SER
22
A
SER
22
1
1
15
A
ALA
33
A
ALA
33
HELX_P
A
TYR
52
A
TYR
52
1
2
20
A
SER
54
A
SER
54
HELX_P
A
ALA
58
A
ALA
58
5
3
5
A
PRO
62
A
PRO
62
HELX_P
A
ASN
66
A
ASN
66
5
4
5
A
LEU
71
A
LEU
71
HELX_P
A
THR
76
A
THR
76
1
5
6
A
ASN
84
A
ASN
84
HELX_P
A
GLU
100
A
GLU
100
1
6
17
A
THR
109
A
THR
109
HELX_P
A
ASN
126
A
ASN
126
1
7
18
A
ASN
127
A
ASN
127
HELX_P
A
HIS
131
A
HIS
131
5
8
5
VIRAL PROTEIN
viral bcl-2 homolog, murine gamma herpes virus, VIRAL PROTEIN
P89884_MHV68
UNP
1
1
P89884
1
136
2ABO
1
136
P89884
A
1
1
136
1
P 1