0.010286
0.000000
0.000000
0.000000
0.010286
0.000000
0.000000
0.000000
0.009011
0.00000
0.00000
0.00000
Zhou, T.
Hamer, D.H.
Hendrickson, W.A.
Sattentau, Q.J.
Kwong, P.D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
97.224
97.224
110.976
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CA
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
N
N
90
S
C
N
91
N
C
N
92
N
O
N
93
N
C
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
N
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
S
C
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
N
N
129
N
C
N
130
N
C
N
131
N
O
N
132
N
O
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
N
N
139
S
C
N
140
N
C
N
141
N
O
N
142
N
C
Y
143
N
C
Y
144
N
N
Y
145
N
C
Y
146
N
C
Y
147
N
N
N
148
N
O
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
S
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
N
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
S
N
238
N
C
N
239
N
O
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
Y
261
N
C
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
N
N
275
S
C
N
276
N
C
N
277
N
O
N
278
N
C
N
279
N
C
N
280
N
C
N
281
N
O
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
N
296
N
O
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
R
C
N
310
N
O
N
311
N
C
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
N
N
323
S
C
N
324
N
C
N
325
N
O
N
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
N
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
Y
359
N
C
N
360
N
O
N
361
N
O
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
N
N
374
S
C
N
375
N
C
N
376
N
O
N
377
N
C
N
378
N
C
N
379
N
C
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
Proc.Natl.Acad.Sci.Usa
PNASA6
0040
0027-8424
102
14575
14580
10.1073/pnas.0507267102
16195378
Interfacial metal and antibody recognition.
2005
10.2210/pdb2adj/pdb
pdb_00002adj
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298
1
Osmic Mirror
IMAGE PLATE
2003-10-03
MARRESEARCH
Osmic Mirror
SINGLE WAVELENGTH
M
x-ray
1
1.54
1.0
1.54
ROTATING ANODE
RIGAKU
23721.117
Q425 Fab Light chain
1
nat
polymer
23929.635
Q425 Fab Heavy chain
1
nat
polymer
40.078
CALCIUM ION
1
syn
non-polymer
18.015
water
30
nat
water
no
no
ETTVTQSPASLSVAIGEKVTIRCITSTDIDDDMNWYQQKPGEPPKFFISEGNTLRPGVPSRFSSSGYGTDFVFTIENMLS
EDVADYYCLQSDTLPLTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL
NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
ETTVTQSPASLSVAIGEKVTIRCITSTDIDDDMNWYQQKPGEPPKFFISEGNTLRPGVPSRFSSSGYGTDFVFTIENMLS
EDVADYYCLQSDTLPLTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL
NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
A
polypeptide(L)
no
no
EVQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKGLEWVATISSGGSYTYYPDNVKGRFTISRDNAKNTLY
LQMSSLKSEDTAMYYCARHEDGNWNYFDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVT
WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC
EVQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKGLEWVATISSGGSYTYYPDNVKGRFTISRDNAKNTLY
LQMSSLKSEDTAMYYCARHEDGNWNYFDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVT
WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Hydridoma
Mus
sample
10090
Mus musculus
house mouse
Hydridoma
Mus
sample
10090
Mus musculus
1
2.737
55.1
VAPOR DIFFUSION, HANGING DROP
5.5
PEG4000, Sodium Acetate, Calcium, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0 K
298.0
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2005-09-20
1
1
2008-04-30
1
2
2011-07-13
1
3
2023-08-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
SEQUENCE
THE SEQUENCE OF FAB PROTEIN IS NOT AVAILABLE AT Genbank OR SWS SEQUENCE DATABASE AT THE TIME OF PROCESSING.
RCSB
Y
RCSB
2005-07-20
REL
REL
CA
CALCIUM ION
HOH
water
2ADG
pdb entry 2ADG
PDB
experimental model
CA2
3000
3
CA
CA
3000
A
HOH
2001
4
HOH
HOH
2001
A
HOH
2002
4
HOH
HOH
2002
A
HOH
2005
4
HOH
HOH
2005
A
HOH
2010
4
HOH
HOH
2010
A
HOH
2012
4
HOH
HOH
2012
A
HOH
2016
4
HOH
HOH
2016
A
HOH
2022
4
HOH
HOH
2022
A
HOH
2027
4
HOH
HOH
2027
A
HOH
2032
4
HOH
HOH
2032
A
HOH
2044
4
HOH
HOH
2044
A
HOH
2003
4
HOH
HOH
2003
B
HOH
2004
4
HOH
HOH
2004
B
HOH
2007
4
HOH
HOH
2007
B
HOH
2008
4
HOH
HOH
2008
B
HOH
2009
4
HOH
HOH
2009
B
HOH
2011
4
HOH
HOH
2011
B
HOH
2014
4
HOH
HOH
2014
B
HOH
2017
4
HOH
HOH
2017
B
HOH
2019
4
HOH
HOH
2019
B
HOH
2023
4
HOH
HOH
2023
B
HOH
2024
4
HOH
HOH
2024
B
HOH
2025
4
HOH
HOH
2025
B
HOH
2026
4
HOH
HOH
2026
B
HOH
2028
4
HOH
HOH
2028
B
HOH
2029
4
HOH
HOH
2029
B
HOH
2031
4
HOH
HOH
2031
B
HOH
2033
4
HOH
HOH
2033
B
HOH
2052
4
HOH
HOH
2052
B
HOH
2059
4
HOH
HOH
2059
B
HOH
2065
4
HOH
HOH
2065
B
GLU
1
n
1
GLU
1
A
THR
2
n
2
THR
2
A
THR
3
n
3
THR
3
A
VAL
4
n
4
VAL
4
A
THR
5
n
5
THR
5
A
GLN
6
n
6
GLN
6
A
SER
7
n
7
SER
7
A
PRO
8
n
8
PRO
8
A
ALA
9
n
9
ALA
9
A
SER
10
n
10
SER
10
A
LEU
11
n
11
LEU
11
A
SER
12
n
12
SER
12
A
VAL
13
n
13
VAL
13
A
ALA
14
n
14
ALA
14
A
ILE
15
n
15
ILE
15
A
GLY
16
n
16
GLY
16
A
GLU
17
n
17
GLU
17
A
LYS
18
n
18
LYS
18
A
VAL
19
n
19
VAL
19
A
THR
20
n
20
THR
20
A
ILE
21
n
21
ILE
21
A
ARG
22
n
22
ARG
22
A
CYS
23
n
23
CYS
23
A
ILE
24
n
24
ILE
24
A
THR
25
n
25
THR
25
A
SER
26
n
26
SER
26
A
THR
27
n
27
THR
27
A
ASP
28
n
28
ASP
28
A
ILE
29
n
29
ILE
29
A
ASP
30
n
30
ASP
30
A
ASP
31
n
31
ASP
31
A
ASP
32
n
32
ASP
32
A
MET
33
n
33
MET
33
A
ASN
34
n
34
ASN
34
A
TRP
35
n
35
TRP
35
A
TYR
36
n
36
TYR
36
A
GLN
37
n
37
GLN
37
A
GLN
38
n
38
GLN
38
A
LYS
39
n
39
LYS
39
A
PRO
40
n
40
PRO
40
A
GLY
41
n
41
GLY
41
A
GLU
42
n
42
GLU
42
A
PRO
43
n
43
PRO
43
A
PRO
44
n
44
PRO
44
A
LYS
45
n
45
LYS
45
A
PHE
46
n
46
PHE
46
A
PHE
47
n
47
PHE
47
A
ILE
48
n
48
ILE
48
A
SER
49
n
49
SER
49
A
GLU
50
n
50
GLU
50
A
GLY
51
n
51
GLY
51
A
ASN
52
n
52
ASN
52
A
THR
53
n
53
THR
53
A
LEU
54
n
54
LEU
54
A
ARG
55
n
55
ARG
55
A
PRO
56
n
56
PRO
56
A
GLY
57
n
57
GLY
57
A
VAL
58
n
58
VAL
58
A
PRO
59
n
59
PRO
59
A
SER
60
n
60
SER
60
A
ARG
61
n
61
ARG
61
A
PHE
62
n
62
PHE
62
A
SER
63
n
63
SER
63
A
SER
64
n
64
SER
64
A
SER
65
n
65
SER
65
A
GLY
66
n
66
GLY
66
A
TYR
67
n
67
TYR
67
A
GLY
68
n
68
GLY
68
A
THR
69
n
69
THR
69
A
ASP
70
n
70
ASP
70
A
PHE
71
n
71
PHE
71
A
VAL
72
n
72
VAL
72
A
PHE
73
n
73
PHE
73
A
THR
74
n
74
THR
74
A
ILE
75
n
75
ILE
75
A
GLU
76
n
76
GLU
76
A
ASN
77
n
77
ASN
77
A
MET
78
n
78
MET
78
A
LEU
79
n
79
LEU
79
A
SER
80
n
80
SER
80
A
GLU
81
n
81
GLU
81
A
ASP
82
n
82
ASP
82
A
VAL
83
n
83
VAL
83
A
ALA
84
n
84
ALA
84
A
ASP
85
n
85
ASP
85
A
TYR
86
n
86
TYR
86
A
TYR
87
n
87
TYR
87
A
CYS
88
n
88
CYS
88
A
LEU
89
n
89
LEU
89
A
GLN
90
n
90
GLN
90
A
SER
91
n
91
SER
91
A
ASP
92
n
92
ASP
92
A
THR
93
n
93
THR
93
A
LEU
94
n
94
LEU
94
A
PRO
95
n
95
PRO
95
A
LEU
96
n
96
LEU
96
A
THR
97
n
97
THR
97
A
PHE
98
n
98
PHE
98
A
GLY
99
n
99
GLY
99
A
SER
100
n
100
SER
100
A
GLY
101
n
101
GLY
101
A
THR
102
n
102
THR
102
A
LYS
103
n
103
LYS
103
A
LEU
104
n
104
LEU
104
A
GLU
105
n
105
GLU
105
A
ILE
106
n
106
ILE
106
A
LYS
107
n
107
LYS
107
A
ARG
108
n
108
ARG
108
A
ALA
109
n
109
ALA
109
A
ASP
110
n
110
ASP
110
A
ALA
111
n
111
ALA
111
A
ALA
112
n
112
ALA
112
A
PRO
113
n
113
PRO
113
A
THR
114
n
114
THR
114
A
VAL
115
n
115
VAL
115
A
SER
116
n
116
SER
116
A
ILE
117
n
117
ILE
117
A
PHE
118
n
118
PHE
118
A
PRO
119
n
119
PRO
119
A
PRO
120
n
120
PRO
120
A
SER
121
n
121
SER
121
A
SER
122
n
122
SER
122
A
GLU
123
n
123
GLU
123
A
GLN
124
n
124
GLN
124
A
LEU
125
n
125
LEU
125
A
THR
126
n
126
THR
126
A
SER
127
n
127
SER
127
A
GLY
128
n
128
GLY
128
A
GLY
129
n
129
GLY
129
A
ALA
130
n
130
ALA
130
A
SER
131
n
131
SER
131
A
VAL
132
n
132
VAL
132
A
VAL
133
n
133
VAL
133
A
CYS
134
n
134
CYS
134
A
PHE
135
n
135
PHE
135
A
LEU
136
n
136
LEU
136
A
ASN
137
n
137
ASN
137
A
ASN
138
n
138
ASN
138
A
PHE
139
n
139
PHE
139
A
TYR
140
n
140
TYR
140
A
PRO
141
n
141
PRO
141
A
LYS
142
n
142
LYS
142
A
ASP
143
n
143
ASP
143
A
ILE
144
n
144
ILE
144
A
ASN
145
n
145
ASN
145
A
VAL
146
n
146
VAL
146
A
LYS
147
n
147
LYS
147
A
TRP
148
n
148
TRP
148
A
LYS
149
n
149
LYS
149
A
ILE
150
n
150
ILE
150
A
ASP
151
n
151
ASP
151
A
GLY
152
n
152
GLY
152
A
SER
153
n
153
SER
153
A
GLU
154
n
154
GLU
154
A
ARG
155
n
155
ARG
155
A
GLN
156
n
156
GLN
156
A
ASN
157
n
157
ASN
157
A
GLY
158
n
158
GLY
158
A
VAL
159
n
159
VAL
159
A
LEU
160
n
160
LEU
160
A
ASN
161
n
161
ASN
161
A
SER
162
n
162
SER
162
A
TRP
163
n
163
TRP
163
A
THR
164
n
164
THR
164
A
ASP
165
n
165
ASP
165
A
GLN
166
n
166
GLN
166
A
ASP
167
n
167
ASP
167
A
SER
168
n
168
SER
168
A
LYS
169
n
169
LYS
169
A
ASP
170
n
170
ASP
170
A
SER
171
n
171
SER
171
A
THR
172
n
172
THR
172
A
TYR
173
n
173
TYR
173
A
SER
174
n
174
SER
174
A
MET
175
n
175
MET
175
A
SER
176
n
176
SER
176
A
SER
177
n
177
SER
177
A
THR
178
n
178
THR
178
A
LEU
179
n
179
LEU
179
A
THR
180
n
180
THR
180
A
LEU
181
n
181
LEU
181
A
THR
182
n
182
THR
182
A
LYS
183
n
183
LYS
183
A
ASP
184
n
184
ASP
184
A
GLU
185
n
185
GLU
185
A
TYR
186
n
186
TYR
186
A
GLU
187
n
187
GLU
187
A
ARG
188
n
188
ARG
188
A
HIS
189
n
189
HIS
189
A
ASN
190
n
190
ASN
190
A
SER
191
n
191
SER
191
A
TYR
192
n
192
TYR
192
A
THR
193
n
193
THR
193
A
CYS
194
n
194
CYS
194
A
GLU
195
n
195
GLU
195
A
ALA
196
n
196
ALA
196
A
THR
197
n
197
THR
197
A
HIS
198
n
198
HIS
198
A
LYS
199
n
199
LYS
199
A
THR
200
n
200
THR
200
A
SER
201
n
201
SER
201
A
THR
202
n
202
THR
202
A
SER
203
n
203
SER
203
A
PRO
204
n
204
PRO
204
A
ILE
205
n
205
ILE
205
A
VAL
206
n
206
VAL
206
A
LYS
207
n
207
LYS
207
A
SER
208
n
208
SER
208
A
PHE
209
n
209
PHE
209
A
ASN
210
n
210
ASN
210
A
ARG
211
n
211
ARG
211
A
n
212
212
A
n
213
213
A
n
214
214
A
GLU
1
n
1
GLU
1
B
VAL
2
n
2
VAL
2
B
GLN
3
n
3
GLN
3
B
LEU
4
n
4
LEU
4
B
VAL
5
n
5
VAL
5
B
GLU
6
n
6
GLU
6
B
SER
7
n
7
SER
7
B
GLY
8
n
8
GLY
8
B
GLY
9
n
9
GLY
9
B
ASP
10
n
10
ASP
10
B
LEU
11
n
11
LEU
11
B
VAL
12
n
12
VAL
12
B
LYS
13
n
13
LYS
13
B
PRO
14
n
14
PRO
14
B
GLY
15
n
15
GLY
15
B
GLY
16
n
16
GLY
16
B
SER
17
n
17
SER
17
B
LEU
18
n
18
LEU
18
B
LYS
19
n
19
LYS
19
B
LEU
20
n
20
LEU
20
B
SER
21
n
21
SER
21
B
CYS
22
n
22
CYS
22
B
ALA
23
n
23
ALA
23
B
ALA
24
n
24
ALA
24
B
SER
25
n
25
SER
25
B
GLY
26
n
26
GLY
26
B
PHE
27
n
27
PHE
27
B
THR
28
n
28
THR
28
B
PHE
29
n
29
PHE
29
B
SER
30
n
30
SER
30
B
SER
31
n
31
SER
31
B
TYR
32
n
32
TYR
32
B
GLY
33
n
33
GLY
33
B
MET
34
n
34
MET
34
B
SER
35
n
35
SER
35
B
TRP
36
n
36
TRP
36
B
VAL
37
n
37
VAL
37
B
ARG
38
n
38
ARG
38
B
GLN
39
n
39
GLN
39
B
THR
40
n
40
THR
40
B
PRO
41
n
41
PRO
41
B
ASP
42
n
42
ASP
42
B
LYS
43
n
43
LYS
43
B
GLY
44
n
44
GLY
44
B
LEU
45
n
45
LEU
45
B
GLU
46
n
46
GLU
46
B
TRP
47
n
47
TRP
47
B
VAL
48
n
48
VAL
48
B
ALA
49
n
49
ALA
49
B
THR
50
n
50
THR
50
B
ILE
51
n
51
ILE
51
B
SER
52
n
52
SER
52
B
SER
53
n
53
SER
53
B
GLY
54
n
54
GLY
54
B
GLY
55
n
55
GLY
55
B
SER
56
n
56
SER
56
B
TYR
57
n
57
TYR
57
B
THR
58
n
58
THR
58
B
TYR
59
n
59
TYR
59
B
TYR
60
n
60
TYR
60
B
PRO
61
n
61
PRO
61
B
ASP
62
n
62
ASP
62
B
ASN
63
n
63
ASN
63
B
VAL
64
n
64
VAL
64
B
LYS
65
n
65
LYS
65
B
GLY
66
n
66
GLY
66
B
ARG
67
n
67
ARG
67
B
PHE
68
n
68
PHE
68
B
THR
69
n
69
THR
69
B
ILE
70
n
70
ILE
70
B
SER
71
n
71
SER
71
B
ARG
72
n
72
ARG
72
B
ASP
73
n
73
ASP
73
B
ASN
74
n
74
ASN
74
B
ALA
75
n
75
ALA
75
B
LYS
76
n
76
LYS
76
B
ASN
77
n
77
ASN
77
B
THR
78
n
78
THR
78
B
LEU
79
n
79
LEU
79
B
TYR
80
n
80
TYR
80
B
LEU
81
n
81
LEU
81
B
GLN
82
n
82
GLN
82
B
MET
82
n
83
A
MET
82
B
SER
82
n
84
B
SER
82
B
SER
82
n
85
C
SER
82
B
LEU
82
n
86
D
LEU
82
B
LYS
83
n
87
LYS
83
B
SER
84
n
88
SER
84
B
GLU
85
n
89
GLU
85
B
ASP
86
n
90
ASP
86
B
THR
87
n
91
THR
87
B
ALA
88
n
92
ALA
88
B
MET
89
n
93
MET
89
B
TYR
90
n
94
TYR
90
B
TYR
91
n
95
TYR
91
B
CYS
92
n
96
CYS
92
B
ALA
93
n
97
ALA
93
B
ARG
94
n
98
ARG
94
B
HIS
95
n
99
HIS
95
B
GLU
96
n
100
GLU
96
B
ASP
97
n
101
ASP
97
B
GLY
98
n
102
GLY
98
B
ASN
99
n
103
ASN
99
B
TRP
100
n
104
TRP
100
B
ASN
100
n
105
A
ASN
100
B
TYR
100
n
106
B
TYR
100
B
PHE
100
n
107
C
PHE
100
B
ASP
101
n
108
ASP
101
B
TYR
102
n
109
TYR
102
B
TRP
103
n
110
TRP
103
B
GLY
104
n
111
GLY
104
B
GLN
105
n
112
GLN
105
B
GLY
106
n
113
GLY
106
B
THR
107
n
114
THR
107
B
THR
108
n
115
THR
108
B
LEU
109
n
116
LEU
109
B
THR
110
n
117
THR
110
B
VAL
111
n
118
VAL
111
B
SER
112
n
119
SER
112
B
SER
113
n
120
SER
113
B
ALA
114
n
121
ALA
114
B
LYS
115
n
122
LYS
115
B
THR
116
n
123
THR
116
B
THR
117
n
124
THR
117
B
PRO
118
n
125
PRO
118
B
PRO
119
n
126
PRO
119
B
SER
120
n
127
SER
120
B
VAL
121
n
128
VAL
121
B
TYR
122
n
129
TYR
122
B
PRO
123
n
130
PRO
123
B
LEU
124
n
131
LEU
124
B
ALA
125
n
132
ALA
125
B
PRO
126
n
133
PRO
126
B
GLY
127
n
134
GLY
127
B
n
135
128
B
n
136
129
B
n
137
130
B
n
138
131
B
n
139
132
B
n
140
133
B
SER
134
n
141
SER
134
B
MET
135
n
142
MET
135
B
VAL
136
n
143
VAL
136
B
THR
137
n
144
THR
137
B
LEU
138
n
145
LEU
138
B
GLY
139
n
146
GLY
139
B
CYS
140
n
147
CYS
140
B
LEU
141
n
148
LEU
141
B
VAL
142
n
149
VAL
142
B
LYS
143
n
150
LYS
143
B
GLY
144
n
151
GLY
144
B
TYR
145
n
152
TYR
145
B
PHE
146
n
153
PHE
146
B
PRO
147
n
154
PRO
147
B
GLU
148
n
155
GLU
148
B
PRO
149
n
156
PRO
149
B
VAL
150
n
157
VAL
150
B
THR
151
n
158
THR
151
B
VAL
152
n
159
VAL
152
B
THR
153
n
160
THR
153
B
TRP
154
n
161
TRP
154
B
ASN
155
n
162
ASN
155
B
SER
156
n
163
SER
156
B
GLY
157
n
164
GLY
157
B
SER
158
n
165
SER
158
B
LEU
159
n
166
LEU
159
B
SER
160
n
167
SER
160
B
SER
161
n
168
SER
161
B
GLY
162
n
169
GLY
162
B
VAL
163
n
170
VAL
163
B
HIS
164
n
171
HIS
164
B
THR
165
n
172
THR
165
B
PHE
166
n
173
PHE
166
B
PRO
167
n
174
PRO
167
B
ALA
168
n
175
ALA
168
B
VAL
169
n
176
VAL
169
B
LEU
170
n
177
LEU
170
B
GLN
171
n
178
GLN
171
B
SER
172
n
179
SER
172
B
ASP
173
n
180
ASP
173
B
LEU
174
n
181
LEU
174
B
TYR
175
n
182
TYR
175
B
THR
176
n
183
THR
176
B
LEU
177
n
184
LEU
177
B
SER
178
n
185
SER
178
B
SER
179
n
186
SER
179
B
SER
180
n
187
SER
180
B
VAL
181
n
188
VAL
181
B
THR
182
n
189
THR
182
B
VAL
183
n
190
VAL
183
B
PRO
184
n
191
PRO
184
B
SER
185
n
192
SER
185
B
SER
186
n
193
SER
186
B
THR
187
n
194
THR
187
B
TRP
188
n
195
TRP
188
B
PRO
189
n
196
PRO
189
B
SER
190
n
197
SER
190
B
GLU
191
n
198
GLU
191
B
THR
192
n
199
THR
192
B
VAL
193
n
200
VAL
193
B
THR
194
n
201
THR
194
B
CYS
195
n
202
CYS
195
B
ASN
196
n
203
ASN
196
B
VAL
197
n
204
VAL
197
B
ALA
198
n
205
ALA
198
B
HIS
199
n
206
HIS
199
B
PRO
200
n
207
PRO
200
B
ALA
201
n
208
ALA
201
B
SER
202
n
209
SER
202
B
SER
203
n
210
SER
203
B
THR
204
n
211
THR
204
B
LYS
205
n
212
LYS
205
B
VAL
206
n
213
VAL
206
B
ASP
207
n
214
ASP
207
B
LYS
208
n
215
LYS
208
B
LYS
209
n
216
LYS
209
B
ILE
210
n
217
ILE
210
B
VAL
211
n
218
VAL
211
B
PRO
212
n
219
PRO
212
B
ARG
213
n
220
ARG
213
B
n
221
214
B
n
222
215
B
author_and_software_defined_assembly
PISA
2
dimeric
3480
-36
19240
A
ASP
32
A
OD1
ASP
32
1_555
A
CA
3000
C
CA
CA
1_555
A
GLU
50
A
OE1
GLU
50
1_555
72.4
A
ASP
32
A
OD1
ASP
32
1_555
A
CA
3000
C
CA
CA
1_555
A
GLU
50
A
OE2
GLU
50
1_555
48.4
A
GLU
50
A
OE1
GLU
50
1_555
A
CA
3000
C
CA
CA
1_555
A
GLU
50
A
OE2
GLU
50
1_555
42.0
A
ASP
32
A
OD1
ASP
32
1_555
A
CA
3000
C
CA
CA
1_555
A
SER
91
A
O
SER
91
1_555
89.9
A
GLU
50
A
OE1
GLU
50
1_555
A
CA
3000
C
CA
CA
1_555
A
SER
91
A
O
SER
91
1_555
102.0
A
GLU
50
A
OE2
GLU
50
1_555
A
CA
3000
C
CA
CA
1_555
A
SER
91
A
O
SER
91
1_555
126.5
A
ASP
32
A
OD1
ASP
32
1_555
A
CA
3000
C
CA
CA
1_555
A
B
ASN
100
B
OD1
ASN
105
1_555
127.4
A
GLU
50
A
OE1
GLU
50
1_555
A
CA
3000
C
CA
CA
1_555
A
B
ASN
100
B
OD1
ASN
105
1_555
56.4
A
GLU
50
A
OE2
GLU
50
1_555
A
CA
3000
C
CA
CA
1_555
A
B
ASN
100
B
OD1
ASN
105
1_555
82.8
A
SER
91
A
O
SER
91
1_555
A
CA
3000
C
CA
CA
1_555
A
B
ASN
100
B
OD1
ASN
105
1_555
110.4
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
SER
7
A
N
SER
7
A
O
ARG
22
A
O
ARG
22
A
N
CYS
23
A
N
CYS
23
A
O
PHE
71
A
O
PHE
71
A
O
THR
74
A
O
THR
74
A
N
SER
63
A
N
SER
63
A
O
LEU
11
A
O
LEU
11
A
N
GLU
105
A
N
GLU
105
A
O
THR
102
A
O
THR
102
A
N
TYR
86
A
N
TYR
86
A
O
TYR
87
A
O
TYR
87
A
N
TYR
36
A
N
TYR
36
A
N
GLN
37
A
N
GLN
37
A
O
LYS
45
A
O
LYS
45
A
N
SER
49
A
N
SER
49
A
O
THR
53
A
O
THR
53
A
O
LEU
11
A
O
LEU
11
A
N
GLU
105
A
N
GLU
105
A
O
THR
102
A
O
THR
102
A
N
TYR
86
A
N
TYR
86
A
N
GLN
90
A
N
GLN
90
A
O
THR
97
A
O
THR
97
A
N
PHE
118
A
N
PHE
118
A
O
VAL
133
A
O
VAL
133
A
N
PHE
139
A
N
PHE
139
A
O
TYR
173
A
O
TYR
173
A
O
THR
178
A
O
THR
178
A
N
LEU
160
A
N
LEU
160
A
N
LYS
147
A
N
LYS
147
A
O
GLU
195
A
O
GLU
195
A
N
CYS
194
A
N
CYS
194
A
O
LYS
207
A
O
LYS
207
B
N
GLN
3
B
N
GLN
3
B
O
SER
25
B
O
SER
25
B
N
CYS
22
B
N
CYS
22
B
O
LEU
79
B
O
LEU
79
B
O
GLN
82
B
O
GLN
82
B
N
THR
69
B
N
THR
69
B
N
VAL
12
B
N
VAL
12
B
O
THR
110
B
O
THR
117
B
O
THR
107
B
O
THR
114
B
N
TYR
90
B
N
TYR
94
B
O
TYR
91
B
O
TYR
95
B
N
VAL
37
B
N
VAL
37
B
N
TRP
36
B
N
TRP
36
B
O
VAL
48
B
O
VAL
48
B
N
THR
50
B
N
THR
50
B
O
TYR
59
B
O
TYR
59
B
N
VAL
12
B
N
VAL
12
B
O
THR
110
B
O
THR
117
B
O
THR
107
B
O
THR
114
B
N
TYR
90
B
N
TYR
94
B
N
ARG
94
B
N
ARG
98
B
O
TYR
102
B
O
TYR
109
B
N
LEU
124
B
N
LEU
131
B
O
GLY
139
B
O
GLY
146
B
N
VAL
142
B
N
VAL
149
B
O
LEU
177
B
O
LEU
184
B
O
SER
180
B
O
SER
187
B
N
HIS
164
B
N
HIS
171
B
N
THR
151
B
N
THR
158
B
O
ALA
198
B
O
ALA
205
B
N
VAL
193
B
N
VAL
200
B
O
ILE
210
B
O
ILE
217
1
A
ASN
212
A
ASN
212
1
Y
1
A
GLU
213
A
GLU
213
1
Y
1
A
CYS
214
A
CYS
214
1
Y
1
B
SER
128
B
SER
135
1
Y
1
B
ALA
129
B
ALA
136
1
Y
1
B
ALA
130
B
ALA
137
1
Y
1
B
GLN
131
B
GLN
138
1
Y
1
B
THR
132
B
THR
139
1
Y
1
B
ASN
133
B
ASN
140
1
Y
1
B
ASP
214
B
ASP
221
1
Y
1
B
CYS
215
B
CYS
222
1
Y
1
-22.72
2.70
111.00
88.28
A
A
A
N
CA
C
HIS
HIS
HIS
189
189
189
N
1
6.72
1.10
114.20
120.92
B
B
B
CA
CB
SG
CYS
CYS
CYS
140
140
140
N
1
A
SER
7
-170.38
142.37
1
A
LEU
11
179.58
106.58
1
A
ILE
15
-16.35
128.50
1
A
ASP
30
64.36
-133.01
1
A
GLU
42
163.39
154.58
1
A
PHE
47
-130.17
-33.42
1
A
GLU
76
-80.57
-73.05
1
A
SER
80
-60.69
18.79
1
A
VAL
83
-61.35
93.32
1
A
ALA
84
-152.12
-157.54
1
A
SER
91
-144.76
32.86
1
A
ALA
109
-39.58
148.77
1
A
ASP
143
-49.21
85.61
1
A
SER
153
-92.20
-126.31
1
A
GLU
154
-168.50
94.24
1
A
GLN
156
-163.16
54.26
1
A
LYS
169
-108.45
-61.93
1
A
SER
171
48.25
19.84
1
A
LEU
181
-173.39
111.62
1
A
THR
182
-22.22
143.52
1
A
ASP
184
-58.30
-70.59
1
A
GLU
185
-55.07
-9.90
1
A
TYR
186
-85.52
-83.64
1
A
GLU
187
-67.69
76.60
1
A
ARG
188
151.60
66.64
1
A
HIS
189
178.75
146.58
1
A
LYS
199
-63.91
20.65
1
A
LYS
207
-174.14
124.21
1
B
THR
28
-69.61
87.28
1
B
LYS
43
-144.04
26.10
1
B
GLU
46
-163.02
111.71
1
B
ALA
49
177.84
156.63
1
B
ASN
63
-68.16
14.54
1
B
VAL
64
-139.90
-35.60
1
B
LYS
65
-38.77
136.75
1
B
ALA
88
-174.52
-179.23
1
B
ASN
99
-117.21
-107.33
A
1
B
ASN
100
-176.87
-141.16
1
B
PHE
146
178.67
134.76
1
B
SER
156
57.76
14.41
1
B
PRO
167
-48.01
156.40
1
B
ASP
173
99.23
20.94
1
B
THR
187
-69.41
10.64
1
B
PRO
189
-88.55
35.32
1
B
SER
203
46.04
27.79
protein_rep.param
protein.top
water_rep.param
water.top
ion.param
ion.top
70.6
-1.97
0.00
0.00
-1.97
0.00
3.94
0.3
0.013
0.213
0.3
0.213
2.90
9.98
561
10984
10984
5.1
91.9
RANDOM
400986.77
0.000000
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
pdb entry 2ADG
Engh & Huber
FLAT MODEL
46.8416
0.289178
0.53
0.36
5.00
0.65
0.49
2.90
9.98
30
3299
1
0
3268
0.008
1.5
27.3
0.98
1.41
1.50
2.50
2.00
1.64
2.00
2.63
2.50
0.458
0.054
0.318
3.08
73
1573
6
4.4
84.7
64.6
2.9
10
2ADJ
10984
10984
2
2
0.21
1
17.1
5.6
92
2.9
3.03
82.8
refinement
CNS
1.1
data reduction
DENZO
data scaling
SCALEPACK
phasing
CNS
Crystal structure of monoclonal anti-CD4 antibody Q425 in complex with Calcium
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
Heterodimer of heavy and light chain
A
SER
121
A
SER
121
HELX_P
A
SER
127
A
SER
127
1
1
7
A
THR
182
A
THR
182
HELX_P
A
GLU
187
A
GLU
187
1
2
6
B
THR
28
B
THR
28
HELX_P
B
TYR
32
B
TYR
32
5
3
5
B
LYS
83
B
LYS
87
HELX_P
B
THR
87
B
THR
91
5
4
5
B
SER
156
B
SER
163
HELX_P
B
SER
158
B
SER
165
5
5
3
B
PRO
200
B
PRO
207
HELX_P
B
SER
203
B
SER
210
5
6
4
disulf
2.039
A
CYS
23
A
SG
CYS
23
1_555
A
CYS
88
A
SG
CYS
88
1_555
disulf
2.030
A
CYS
134
A
SG
CYS
134
1_555
A
CYS
194
A
SG
CYS
194
1_555
disulf
2.021
B
CYS
22
B
SG
CYS
22
1_555
B
CYS
92
B
SG
CYS
96
1_555
disulf
2.032
B
CYS
140
B
SG
CYS
147
1_555
B
CYS
195
B
SG
CYS
202
1_555
metalc
3.233
A
ASP
32
A
OD1
ASP
32
1_555
A
CA
3000
C
CA
CA
1_555
metalc
3.252
A
GLU
50
A
OE1
GLU
50
1_555
A
CA
3000
C
CA
CA
1_555
metalc
2.759
A
GLU
50
A
OE2
GLU
50
1_555
A
CA
3000
C
CA
CA
1_555
metalc
2.746
A
SER
91
A
O
SER
91
1_555
A
CA
3000
C
CA
CA
1_555
metalc
2.831
A
A
CA
3000
C
CA
CA
1_555
B
ASN
100
B
OD1
ASN
105
1_555
IMMUNE SYSTEM
anti-CD4, interfacial metal, antibody recognition, IMMUNE SYSTEM
A
SER
7
A
SER
7
1
A
PRO
8
A
PRO
8
0.27
A
LEU
94
A
LEU
94
1
A
PRO
95
A
PRO
95
-0.60
A
TYR
140
A
TYR
140
1
A
PRO
141
A
PRO
141
-0.06
B
PHE
146
B
PHE
153
1
B
PRO
147
B
PRO
154
0.09
B
GLU
148
B
GLU
155
1
B
PRO
149
B
PRO
156
0.19
B
TRP
188
B
TRP
195
1
B
PRO
189
B
PRO
196
-0.14
Q58EU4_MOUSE
UNP
1
Q58EU4
2ADJ
PDB
2
2ADJ
81
238
2ADJ
57
214
Q58EU4
A
1
57
214
1
215
2ADJ
1
215
2ADJ
B
2
1
222
4
6
4
4
3
4
6
4
4
3
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
4
A
VAL
4
A
SER
7
A
SER
7
A
VAL
19
A
VAL
19
A
THR
25
A
THR
25
A
ASP
70
A
ASP
70
A
ILE
75
A
ILE
75
A
PHE
62
A
PHE
62
A
GLY
66
A
GLY
66
A
SER
10
A
SER
10
A
VAL
13
A
VAL
13
A
THR
102
A
THR
102
A
ILE
106
A
ILE
106
A
ASP
85
A
ASP
85
A
GLN
90
A
GLN
90
A
MET
33
A
MET
33
A
GLN
38
A
GLN
38
A
LYS
45
A
LYS
45
A
SER
49
A
SER
49
A
THR
53
A
THR
53
A
LEU
54
A
LEU
54
A
SER
10
A
SER
10
A
VAL
13
A
VAL
13
A
THR
102
A
THR
102
A
ILE
106
A
ILE
106
A
ASP
85
A
ASP
85
A
GLN
90
A
GLN
90
A
THR
97
A
THR
97
A
PHE
98
A
PHE
98
A
THR
114
A
THR
114
A
PHE
118
A
PHE
118
A
SER
131
A
SER
131
A
PHE
139
A
PHE
139
A
TYR
173
A
TYR
173
A
THR
180
A
THR
180
A
VAL
159
A
VAL
159
A
TRP
163
A
TRP
163
A
VAL
146
A
VAL
146
A
ILE
150
A
ILE
150
A
SER
191
A
SER
191
A
ALA
196
A
ALA
196
A
ILE
205
A
ILE
205
A
ASN
210
A
ASN
210
B
GLN
3
B
GLN
3
B
SER
7
B
SER
7
B
LEU
18
B
LEU
18
B
SER
25
B
SER
25
B
THR
78
B
THR
78
B
MET
82
B
MET
83
A
B
THR
69
B
THR
69
B
ASP
73
B
ASP
73
B
LEU
11
B
LEU
11
B
VAL
12
B
VAL
12
B
THR
107
B
THR
114
B
VAL
111
B
VAL
118
B
ALA
88
B
ALA
92
B
ARG
94
B
ARG
98
B
MET
34
B
MET
34
B
THR
40
B
THR
40
B
GLY
44
B
GLY
44
B
ILE
51
B
ILE
51
B
THR
58
B
THR
58
B
TYR
59
B
TYR
59
B
LEU
11
B
LEU
11
B
VAL
12
B
VAL
12
B
THR
107
B
THR
114
B
VAL
111
B
VAL
118
B
ALA
88
B
ALA
92
B
ARG
94
B
ARG
98
B
TYR
102
B
TYR
109
B
TRP
103
B
TRP
110
B
SER
120
B
SER
127
B
LEU
124
B
LEU
131
B
THR
137
B
THR
144
B
TYR
145
B
TYR
152
B
TYR
175
B
TYR
182
B
THR
182
B
THR
189
B
VAL
163
B
VAL
170
B
THR
165
B
THR
172
B
THR
151
B
THR
158
B
TRP
154
B
TRP
161
B
VAL
193
B
VAL
200
B
HIS
199
B
HIS
206
B
THR
204
B
THR
211
B
ILE
210
B
ILE
217
BINDING SITE FOR RESIDUE CA A 3000
A
CA
3000
Software
4
A
ASP
32
A
ASP
32
4
1_555
A
GLU
50
A
GLU
50
4
1_555
A
SER
91
A
SER
91
4
1_555
B
ASN
100
B
ASN
105
A
4
1_555
96
P 43 21 2