0.01087 0.00000 0.00056 0.00000 0.01473 0.00000 0.00000 0.00000 0.01335 0.00000 0.00000 0.00000 Kitayner, M. Rozenberg, H. Kessler, N. Rabinovich, D. Shakked, Z. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 92.97 90.00 91.997 67.903 74.989 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N P N 160 N O N 161 N O N 162 N O N 163 N C N 164 R C N 165 N O N 166 S C N 167 N O N 168 N C N 169 R C Y 170 N N Y 171 N C Y 172 N N Y 173 N C N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N N Y 180 N C N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N P N 197 N O N 198 N O N 199 N O N 200 N C N 201 R C N 202 N O N 203 S C N 204 N O N 205 N C N 206 R C N 207 N N N 208 N C N 209 N O N 210 N N N 211 N C N 212 N O N 213 N C N 214 N C N 215 N C N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N C N 238 N O N 239 N N N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N C N 258 N O N 259 N O N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 N C N 272 N C N 273 N O N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N N N 281 S C N 282 N C N 283 N O N 284 N C Y 285 N C Y 286 N N Y 287 N C Y 288 N C Y 289 N N N 290 N O N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N O N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 S C N 309 N C N 310 N C N 311 N C N 312 N O N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N N N 327 S C N 328 N C N 329 N O N 330 N C N 331 N C N 332 N C N 333 N C N 334 N O N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C N 353 N C N 354 N C N 355 N C N 356 N N N 357 N O N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N N N 374 S C N 375 N C N 376 N O N 377 N C N 378 N C N 379 N S N 380 N C N 381 N O N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N N N 394 S C N 395 N C N 396 N O N 397 N C Y 398 N C Y 399 N C Y 400 N C Y 401 N C Y 402 N C Y 403 N C N 404 N O N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N N N 417 S C N 418 N C N 419 N O N 420 N C N 421 N C N 422 N C N 423 N O N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N N N 434 S C N 435 N C N 436 N O N 437 N C N 438 N O N 439 N O N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N N N 448 S C N 449 N C N 450 N O N 451 R C N 452 N O N 453 N C N 454 N O N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N N N 465 S C N 466 N C N 467 N O N 468 N C Y 469 N C Y 470 N C Y 471 N C Y 472 N N Y 473 N C Y 474 N C Y 475 N C Y 476 N C Y 477 N C N 478 N O N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 491 N N N 492 S C N 493 N C N 494 N O N 495 N C Y 496 N C Y 497 N C Y 498 N C Y 499 N C Y 500 N C Y 501 N C N 502 N O N 503 N O N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N N N 516 S C N 517 N C N 518 N O N 519 N C N 520 N C N 521 N C N 522 N O N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 534 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing Y 289 N sing Y 290 N doub Y 291 N doub N 292 N sing Y 293 N sing N 294 N sing Y 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N doub N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N doub N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N doub N 393 N sing N 394 N sing N 395 N sing N 396 N sing Y 397 N doub Y 398 N sing Y 399 N sing N 400 N sing Y 401 N doub N 402 N sing Y 403 N doub N 404 N sing Y 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N doub N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N doub N 462 N sing N 463 N sing N 464 N sing N 465 N sing Y 466 N doub Y 467 N sing Y 468 N sing N 469 N sing Y 470 N doub Y 471 N sing Y 472 N sing N 473 N sing Y 474 N sing Y 475 N doub N 476 N sing Y 477 N doub N 478 N sing Y 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N doub N 490 N sing N 491 N sing N 492 N sing N 493 N sing Y 494 N doub Y 495 N sing Y 496 N sing N 497 N sing Y 498 N doub N 499 N sing Y 500 N doub N 501 N sing Y 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N doub N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing US Mol.Cell MOCEFL 2168 1097-2765 22 741 753 10.1016/j.molcel.2006.05.015 16793544 Structural Basis of DNA Recognition by p53 Tetramers 2006 10.2210/pdb2ady/pdb pdb_00002ady 100 1 Osmic Inc. MSC - Blue Confocal Mirrors IMAGE PLATE 2004-10-05 RIGAKU RAXIS IV++ Osmic Inc. MSC - Blue Confocal Mirrors SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RUH3R 3663.392 5'-D(*CP*GP*GP*AP*CP*AP*TP*GP*TP*CP*CP*G)-3' 2 syn polymer 22505.582 Cellular tumor antigen p53 residues 94-293 2 man polymer 65.409 ZINC ION 2 syn non-polymer 18.015 water 213 nat water Tumor suppressor p53, Phosphoprotein p53, Antigen NY-CO-13 no no (DC)(DG)(DG)(DA)(DC)(DA)(DT)(DG)(DT)(DC)(DC)(DG) CGGACATGTCCG E,F polydeoxyribonucleotide no no SSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVV RRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILT IITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKG SSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVV RRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILT IITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKG A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample 9606 Homo sapiens 562 Escherichia coli plasmid Pet27b 1 2.3 46. VAPOR DIFFUSION, HANGING DROP 6.2 Ammonium Fluoride, PEG 3350, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 Ammonium Fluoride 1 PEG 3350 1 H2O 1 Ammonium Fluoride 2 PEG 3350 2 H2O 2 -11.722 1 19 E 1 F 12 -1.409 E_DC1:DG12_F 1 -17.077 -0.192 0.576 0.141 -0.619 1 19 E 2 F 11 4.476 E_DG2:DC11_F 2 -6.342 -0.353 -0.048 -0.066 -8.337 1 19 E 3 F 10 2.085 E_DG3:DC10_F 3 -12.714 -0.005 -0.482 -0.169 6.217 1 20 E 4 F 9 9.944 E_DA4:DT9_F 4 -15.814 0.316 0.176 -0.006 21.098 1 19 E 5 F 8 1.478 E_DC5:DG8_F 5 -7.690 -0.010 -0.493 -0.121 -4.313 1 20 E 6 F 7 9.508 E_DA6:DT7_F 6 -14.466 0.211 0.099 -0.107 3.807 1 20 E 7 F 6 4.888 E_DT7:DA6_F 7 -12.139 0.136 0.197 -0.263 -18.257 1 19 E 8 F 5 1.447 E_DG8:DC5_F 8 -16.316 -0.219 -0.427 -0.146 -8.209 1 20 E 9 F 4 -4.325 E_DT9:DA4_F 9 -10.934 0.140 0.213 -0.437 3.406 1 19 E 10 F 3 2.638 E_DC10:DG3_F 10 -9.987 0.240 -0.153 -0.325 -13.266 1 19 E 11 F 2 -0.168 E_DC11:DG2_F 11 -8.622 -0.040 0.654 -0.318 2.796 37.615 E E 1 2 15.194 F F 12 11 2.914 9.692 -0.418 -0.049 EE_DC1DG2:DC11DG12_FF 1 1.195 -1.873 36.370 -1.196 0.787 3.487 37.183 E E 2 3 6.955 F F 11 10 3.457 4.424 -0.107 0.512 EE_DG2DG3:DC10DC11_FF 2 1.305 -2.052 36.906 0.175 0.353 2.816 32.862 E E 3 4 0.797 F F 10 9 2.943 0.450 1.061 0.222 EE_DG3DA4:DT9DC10_FF 3 -3.595 6.367 32.667 0.325 -2.419 2.975 22.938 E E 4 5 -3.994 F F 9 8 2.914 -1.587 0.701 -1.011 EE_DA4DC5:DG8DT9_FF 4 -0.054 0.135 22.884 -2.036 -1.780 3.779 48.965 E E 5 6 12.589 F F 8 7 3.801 10.364 0.134 0.266 EE_DC5DA6:DT7DG8_FF 5 0.575 -0.698 47.919 -0.599 -0.110 2.816 22.296 E E 6 7 15.172 F F 7 6 3.008 5.773 -0.308 -0.385 EE_DA6DT7:DA6DT7_FF 6 -3.798 9.981 21.211 -2.971 -0.503 3.678 44.153 E E 7 8 8.327 F F 6 5 3.724 6.240 -0.385 -0.062 EE_DT7DG8:DC5DA6_FF 7 0.505 -0.674 43.729 -0.747 0.566 3.146 33.072 E E 8 9 1.759 F F 5 4 3.073 0.998 -0.916 -0.926 EE_DG8DT9:DA4DC5_FF 8 -5.016 8.846 32.685 -1.788 0.798 2.941 31.834 E E 9 10 -9.638 F F 4 3 2.947 -5.262 0.088 -0.194 EE_DT9DC10:DG3DA4_FF 9 1.343 -2.461 31.379 0.518 0.062 3.810 37.115 E E 10 11 -7.978 F F 3 2 3.754 -5.052 -0.231 -0.664 EE_DC10DC11:DG2DG3_FF 10 -4.568 7.214 36.506 -0.257 -0.348 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_validate_close_contact struct_site repository Initial release Version format compliance Version format compliance Advisory Data collection Database references Derived calculations Refinement description 1 0 2006-07-11 1 1 2008-04-30 1 2 2011-07-13 1 3 2023-10-25 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.auth_seq_id_2 _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Tumor suppressor protein p53/DNA Complex (I) Tumor suppressor protein p53/DNA Complex (III) Tumor suppressor protein p53/DNA Complex (II) RCSB Y PDBJ 2005-07-21 REL REL ZN ZINC ION HOH water 1TSR PDB ENTRY 1TSR PDB experimental model ZN 1 3 ZN ZN 1 A ZN 1 3 ZN ZN 1 B HOH 49 4 HOH HOH 49 E HOH 69 4 HOH HOH 69 E HOH 73 4 HOH HOH 73 E HOH 83 4 HOH HOH 83 E HOH 97 4 HOH HOH 97 E HOH 108 4 HOH HOH 108 E HOH 113 4 HOH HOH 113 E HOH 132 4 HOH HOH 132 E HOH 134 4 HOH HOH 134 E HOH 149 4 HOH HOH 149 E HOH 153 4 HOH HOH 153 E HOH 166 4 HOH HOH 166 E HOH 180 4 HOH HOH 180 E HOH 183 4 HOH HOH 183 E HOH 188 4 HOH HOH 188 E HOH 190 4 HOH HOH 190 E HOH 204 4 HOH HOH 204 E HOH 2 4 HOH HOH 13 F HOH 4 4 HOH HOH 14 F HOH 29 4 HOH HOH 15 F HOH 37 4 HOH HOH 16 F HOH 56 4 HOH HOH 17 F HOH 63 4 HOH HOH 18 F HOH 152 4 HOH HOH 19 F HOH 158 4 HOH HOH 20 F HOH 159 4 HOH HOH 21 F HOH 164 4 HOH HOH 22 F HOH 165 4 HOH HOH 23 F HOH 168 4 HOH HOH 24 F HOH 178 4 HOH HOH 25 F HOH 1 4 HOH HOH 294 A HOH 5 4 HOH HOH 295 A HOH 6 4 HOH HOH 296 A HOH 7 4 HOH HOH 297 A HOH 8 4 HOH HOH 298 A HOH 9 4 HOH HOH 299 A HOH 10 4 HOH HOH 300 A HOH 11 4 HOH HOH 301 A HOH 14 4 HOH HOH 302 A HOH 15 4 HOH HOH 303 A HOH 17 4 HOH HOH 304 A HOH 19 4 HOH HOH 305 A HOH 22 4 HOH HOH 306 A HOH 23 4 HOH HOH 307 A HOH 25 4 HOH HOH 308 A HOH 27 4 HOH HOH 309 A HOH 30 4 HOH HOH 310 A HOH 31 4 HOH HOH 311 A HOH 32 4 HOH HOH 312 A HOH 33 4 HOH HOH 313 A HOH 34 4 HOH HOH 314 A HOH 36 4 HOH HOH 315 A HOH 38 4 HOH HOH 316 A HOH 41 4 HOH HOH 317 A HOH 45 4 HOH HOH 318 A HOH 47 4 HOH HOH 319 A HOH 51 4 HOH HOH 320 A HOH 54 4 HOH HOH 321 A HOH 57 4 HOH HOH 322 A HOH 58 4 HOH HOH 323 A HOH 66 4 HOH HOH 324 A HOH 68 4 HOH HOH 325 A HOH 70 4 HOH HOH 326 A HOH 71 4 HOH HOH 327 A HOH 72 4 HOH HOH 328 A HOH 74 4 HOH HOH 329 A HOH 77 4 HOH HOH 330 A HOH 78 4 HOH HOH 331 A HOH 79 4 HOH HOH 332 A HOH 81 4 HOH HOH 333 A HOH 82 4 HOH HOH 334 A HOH 84 4 HOH HOH 335 A HOH 85 4 HOH HOH 336 A HOH 88 4 HOH HOH 337 A HOH 90 4 HOH HOH 338 A HOH 91 4 HOH HOH 339 A HOH 92 4 HOH HOH 340 A HOH 94 4 HOH HOH 341 A HOH 95 4 HOH HOH 342 A HOH 96 4 HOH HOH 343 A HOH 99 4 HOH HOH 344 A HOH 104 4 HOH HOH 345 A HOH 105 4 HOH HOH 346 A HOH 107 4 HOH HOH 347 A HOH 110 4 HOH HOH 348 A HOH 114 4 HOH HOH 349 A HOH 116 4 HOH HOH 350 A HOH 117 4 HOH HOH 351 A HOH 118 4 HOH HOH 352 A HOH 119 4 HOH HOH 353 A HOH 120 4 HOH HOH 354 A HOH 121 4 HOH HOH 355 A HOH 125 4 HOH HOH 356 A HOH 126 4 HOH HOH 357 A HOH 130 4 HOH HOH 358 A HOH 131 4 HOH HOH 359 A HOH 138 4 HOH HOH 360 A HOH 139 4 HOH HOH 361 A HOH 140 4 HOH HOH 362 A HOH 141 4 HOH HOH 363 A HOH 142 4 HOH HOH 364 A HOH 144 4 HOH HOH 365 A HOH 145 4 HOH HOH 366 A HOH 146 4 HOH HOH 367 A HOH 147 4 HOH HOH 368 A HOH 154 4 HOH HOH 369 A HOH 157 4 HOH HOH 370 A HOH 161 4 HOH HOH 371 A HOH 163 4 HOH HOH 372 A HOH 169 4 HOH HOH 373 A HOH 170 4 HOH HOH 374 A HOH 171 4 HOH HOH 375 A HOH 172 4 HOH HOH 376 A HOH 173 4 HOH HOH 377 A HOH 174 4 HOH HOH 378 A HOH 175 4 HOH HOH 379 A HOH 177 4 HOH HOH 380 A HOH 182 4 HOH HOH 381 A HOH 185 4 HOH HOH 382 A HOH 186 4 HOH HOH 383 A HOH 187 4 HOH HOH 384 A HOH 189 4 HOH HOH 385 A HOH 191 4 HOH HOH 386 A HOH 192 4 HOH HOH 387 A HOH 193 4 HOH HOH 388 A HOH 194 4 HOH HOH 389 A HOH 196 4 HOH HOH 390 A HOH 197 4 HOH HOH 391 A HOH 198 4 HOH HOH 392 A HOH 199 4 HOH HOH 393 A HOH 201 4 HOH HOH 394 A HOH 202 4 HOH HOH 395 A HOH 205 4 HOH HOH 396 A HOH 206 4 HOH HOH 397 A HOH 207 4 HOH HOH 398 A HOH 208 4 HOH HOH 399 A HOH 3 4 HOH HOH 294 B HOH 12 4 HOH HOH 295 B HOH 13 4 HOH HOH 296 B HOH 16 4 HOH HOH 297 B HOH 18 4 HOH HOH 298 B HOH 20 4 HOH HOH 299 B HOH 21 4 HOH HOH 300 B HOH 24 4 HOH HOH 301 B HOH 26 4 HOH HOH 302 B HOH 28 4 HOH HOH 303 B HOH 35 4 HOH HOH 304 B HOH 39 4 HOH HOH 305 B HOH 40 4 HOH HOH 306 B HOH 42 4 HOH HOH 307 B HOH 43 4 HOH HOH 308 B HOH 44 4 HOH HOH 309 B HOH 46 4 HOH HOH 310 B HOH 48 4 HOH HOH 311 B HOH 50 4 HOH HOH 312 B HOH 52 4 HOH HOH 313 B HOH 53 4 HOH HOH 314 B HOH 55 4 HOH HOH 315 B HOH 59 4 HOH HOH 316 B HOH 60 4 HOH HOH 317 B HOH 61 4 HOH HOH 318 B HOH 62 4 HOH HOH 319 B HOH 64 4 HOH HOH 320 B HOH 65 4 HOH HOH 321 B HOH 67 4 HOH HOH 322 B HOH 75 4 HOH HOH 323 B HOH 76 4 HOH HOH 324 B HOH 80 4 HOH HOH 325 B HOH 86 4 HOH HOH 326 B HOH 87 4 HOH HOH 327 B HOH 89 4 HOH HOH 328 B HOH 93 4 HOH HOH 329 B HOH 98 4 HOH HOH 330 B HOH 100 4 HOH HOH 331 B HOH 101 4 HOH HOH 332 B HOH 102 4 HOH HOH 333 B HOH 103 4 HOH HOH 334 B HOH 106 4 HOH HOH 335 B HOH 109 4 HOH HOH 336 B HOH 111 4 HOH HOH 337 B HOH 112 4 HOH HOH 338 B HOH 115 4 HOH HOH 339 B HOH 122 4 HOH HOH 340 B HOH 123 4 HOH HOH 341 B HOH 124 4 HOH HOH 342 B HOH 127 4 HOH HOH 343 B HOH 128 4 HOH HOH 344 B HOH 129 4 HOH HOH 345 B HOH 133 4 HOH HOH 346 B HOH 135 4 HOH HOH 347 B HOH 136 4 HOH HOH 348 B HOH 137 4 HOH HOH 349 B HOH 143 4 HOH HOH 350 B HOH 148 4 HOH HOH 351 B HOH 150 4 HOH HOH 352 B HOH 151 4 HOH HOH 353 B HOH 155 4 HOH HOH 354 B HOH 156 4 HOH HOH 355 B HOH 160 4 HOH HOH 356 B HOH 162 4 HOH HOH 357 B HOH 167 4 HOH HOH 358 B HOH 176 4 HOH HOH 359 B HOH 179 4 HOH HOH 360 B HOH 181 4 HOH HOH 361 B HOH 184 4 HOH HOH 362 B HOH 195 4 HOH HOH 363 B HOH 200 4 HOH HOH 364 B HOH 203 4 HOH HOH 365 B HOH 209 4 HOH HOH 366 B HOH 210 4 HOH HOH 367 B HOH 211 4 HOH HOH 368 B HOH 212 4 HOH HOH 369 B HOH 213 4 HOH HOH 370 B C 1 n 1 DC 1 E G 2 n 2 DG 2 E G 3 n 3 DG 3 E A 4 n 4 DA 4 E C 5 n 5 DC 5 E A 6 n 6 DA 6 E T 7 n 7 DT 7 E G 8 n 8 DG 8 E T 9 n 9 DT 9 E C 10 n 10 DC 10 E C 11 n 11 DC 11 E G 12 n 12 DG 12 E C 1 n 1 DC 1 F G 2 n 2 DG 2 F G 3 n 3 DG 3 F A 4 n 4 DA 4 F C 5 n 5 DC 5 F A 6 n 6 DA 6 F T 7 n 7 DT 7 F G 8 n 8 DG 8 F T 9 n 9 DT 9 F C 10 n 10 DC 10 F C 11 n 11 DC 11 F G 12 n 12 DG 12 F n 1 94 A SER 95 n 2 SER 95 A SER 96 n 3 SER 96 A VAL 97 n 4 VAL 97 A PRO 98 n 5 PRO 98 A SER 99 n 6 SER 99 A GLN 100 n 7 GLN 100 A LYS 101 n 8 LYS 101 A THR 102 n 9 THR 102 A TYR 103 n 10 TYR 103 A GLN 104 n 11 GLN 104 A GLY 105 n 12 GLY 105 A SER 106 n 13 SER 106 A TYR 107 n 14 TYR 107 A GLY 108 n 15 GLY 108 A PHE 109 n 16 PHE 109 A ARG 110 n 17 ARG 110 A LEU 111 n 18 LEU 111 A GLY 112 n 19 GLY 112 A PHE 113 n 20 PHE 113 A LEU 114 n 21 LEU 114 A HIS 115 n 22 HIS 115 A SER 116 n 23 SER 116 A GLY 117 n 24 GLY 117 A THR 118 n 25 THR 118 A ALA 119 n 26 ALA 119 A LYS 120 n 27 LYS 120 A SER 121 n 28 SER 121 A VAL 122 n 29 VAL 122 A THR 123 n 30 THR 123 A CYS 124 n 31 CYS 124 A THR 125 n 32 THR 125 A TYR 126 n 33 TYR 126 A SER 127 n 34 SER 127 A PRO 128 n 35 PRO 128 A ALA 129 n 36 ALA 129 A LEU 130 n 37 LEU 130 A ASN 131 n 38 ASN 131 A LYS 132 n 39 LYS 132 A MET 133 n 40 MET 133 A PHE 134 n 41 PHE 134 A CYS 135 n 42 CYS 135 A GLN 136 n 43 GLN 136 A LEU 137 n 44 LEU 137 A ALA 138 n 45 ALA 138 A LYS 139 n 46 LYS 139 A THR 140 n 47 THR 140 A CYS 141 n 48 CYS 141 A PRO 142 n 49 PRO 142 A VAL 143 n 50 VAL 143 A GLN 144 n 51 GLN 144 A LEU 145 n 52 LEU 145 A TRP 146 n 53 TRP 146 A VAL 147 n 54 VAL 147 A ASP 148 n 55 ASP 148 A SER 149 n 56 SER 149 A THR 150 n 57 THR 150 A PRO 151 n 58 PRO 151 A PRO 152 n 59 PRO 152 A PRO 153 n 60 PRO 153 A GLY 154 n 61 GLY 154 A THR 155 n 62 THR 155 A ARG 156 n 63 ARG 156 A VAL 157 n 64 VAL 157 A ARG 158 n 65 ARG 158 A ALA 159 n 66 ALA 159 A MET 160 n 67 MET 160 A ALA 161 n 68 ALA 161 A ILE 162 n 69 ILE 162 A TYR 163 n 70 TYR 163 A LYS 164 n 71 LYS 164 A GLN 165 n 72 GLN 165 A SER 166 n 73 SER 166 A GLN 167 n 74 GLN 167 A HIS 168 n 75 HIS 168 A MET 169 n 76 MET 169 A THR 170 n 77 THR 170 A GLU 171 n 78 GLU 171 A VAL 172 n 79 VAL 172 A VAL 173 n 80 VAL 173 A ARG 174 n 81 ARG 174 A ARG 175 n 82 ARG 175 A CYS 176 n 83 CYS 176 A PRO 177 n 84 PRO 177 A HIS 178 n 85 HIS 178 A HIS 179 n 86 HIS 179 A GLU 180 n 87 GLU 180 A ARG 181 n 88 ARG 181 A CYS 182 n 89 CYS 182 A SER 183 n 90 SER 183 A ASP 184 n 91 ASP 184 A SER 185 n 92 SER 185 A ASP 186 n 93 ASP 186 A GLY 187 n 94 GLY 187 A LEU 188 n 95 LEU 188 A ALA 189 n 96 ALA 189 A PRO 190 n 97 PRO 190 A PRO 191 n 98 PRO 191 A GLN 192 n 99 GLN 192 A HIS 193 n 100 HIS 193 A LEU 194 n 101 LEU 194 A ILE 195 n 102 ILE 195 A ARG 196 n 103 ARG 196 A VAL 197 n 104 VAL 197 A GLU 198 n 105 GLU 198 A GLY 199 n 106 GLY 199 A ASN 200 n 107 ASN 200 A LEU 201 n 108 LEU 201 A ARG 202 n 109 ARG 202 A VAL 203 n 110 VAL 203 A GLU 204 n 111 GLU 204 A TYR 205 n 112 TYR 205 A LEU 206 n 113 LEU 206 A ASP 207 n 114 ASP 207 A ASP 208 n 115 ASP 208 A ARG 209 n 116 ARG 209 A ASN 210 n 117 ASN 210 A THR 211 n 118 THR 211 A PHE 212 n 119 PHE 212 A ARG 213 n 120 ARG 213 A HIS 214 n 121 HIS 214 A SER 215 n 122 SER 215 A VAL 216 n 123 VAL 216 A VAL 217 n 124 VAL 217 A VAL 218 n 125 VAL 218 A PRO 219 n 126 PRO 219 A TYR 220 n 127 TYR 220 A GLU 221 n 128 GLU 221 A PRO 222 n 129 PRO 222 A PRO 223 n 130 PRO 223 A GLU 224 n 131 GLU 224 A VAL 225 n 132 VAL 225 A GLY 226 n 133 GLY 226 A SER 227 n 134 SER 227 A ASP 228 n 135 ASP 228 A CYS 229 n 136 CYS 229 A THR 230 n 137 THR 230 A THR 231 n 138 THR 231 A ILE 232 n 139 ILE 232 A HIS 233 n 140 HIS 233 A TYR 234 n 141 TYR 234 A ASN 235 n 142 ASN 235 A TYR 236 n 143 TYR 236 A MET 237 n 144 MET 237 A CYS 238 n 145 CYS 238 A ASN 239 n 146 ASN 239 A SER 240 n 147 SER 240 A SER 241 n 148 SER 241 A CYS 242 n 149 CYS 242 A MET 243 n 150 MET 243 A GLY 244 n 151 GLY 244 A GLY 245 n 152 GLY 245 A MET 246 n 153 MET 246 A ASN 247 n 154 ASN 247 A ARG 248 n 155 ARG 248 A ARG 249 n 156 ARG 249 A PRO 250 n 157 PRO 250 A ILE 251 n 158 ILE 251 A LEU 252 n 159 LEU 252 A THR 253 n 160 THR 253 A ILE 254 n 161 ILE 254 A ILE 255 n 162 ILE 255 A THR 256 n 163 THR 256 A LEU 257 n 164 LEU 257 A GLU 258 n 165 GLU 258 A ASP 259 n 166 ASP 259 A SER 260 n 167 SER 260 A SER 261 n 168 SER 261 A GLY 262 n 169 GLY 262 A ASN 263 n 170 ASN 263 A LEU 264 n 171 LEU 264 A LEU 265 n 172 LEU 265 A GLY 266 n 173 GLY 266 A ARG 267 n 174 ARG 267 A ASN 268 n 175 ASN 268 A SER 269 n 176 SER 269 A PHE 270 n 177 PHE 270 A GLU 271 n 178 GLU 271 A VAL 272 n 179 VAL 272 A ARG 273 n 180 ARG 273 A VAL 274 n 181 VAL 274 A CYS 275 n 182 CYS 275 A ALA 276 n 183 ALA 276 A CYS 277 n 184 CYS 277 A PRO 278 n 185 PRO 278 A GLY 279 n 186 GLY 279 A ARG 280 n 187 ARG 280 A ASP 281 n 188 ASP 281 A ARG 282 n 189 ARG 282 A ARG 283 n 190 ARG 283 A THR 284 n 191 THR 284 A GLU 285 n 192 GLU 285 A GLU 286 n 193 GLU 286 A GLU 287 n 194 GLU 287 A ASN 288 n 195 ASN 288 A LEU 289 n 196 LEU 289 A ARG 290 n 197 ARG 290 A LYS 291 n 198 LYS 291 A LYS 292 n 199 LYS 292 A n 200 293 A SER 94 n 1 SER 94 B SER 95 n 2 SER 95 B SER 96 n 3 SER 96 B VAL 97 n 4 VAL 97 B PRO 98 n 5 PRO 98 B SER 99 n 6 SER 99 B GLN 100 n 7 GLN 100 B LYS 101 n 8 LYS 101 B THR 102 n 9 THR 102 B TYR 103 n 10 TYR 103 B GLN 104 n 11 GLN 104 B GLY 105 n 12 GLY 105 B SER 106 n 13 SER 106 B TYR 107 n 14 TYR 107 B GLY 108 n 15 GLY 108 B PHE 109 n 16 PHE 109 B ARG 110 n 17 ARG 110 B LEU 111 n 18 LEU 111 B GLY 112 n 19 GLY 112 B PHE 113 n 20 PHE 113 B LEU 114 n 21 LEU 114 B HIS 115 n 22 HIS 115 B SER 116 n 23 SER 116 B GLY 117 n 24 GLY 117 B THR 118 n 25 THR 118 B ALA 119 n 26 ALA 119 B LYS 120 n 27 LYS 120 B SER 121 n 28 SER 121 B VAL 122 n 29 VAL 122 B THR 123 n 30 THR 123 B CYS 124 n 31 CYS 124 B THR 125 n 32 THR 125 B TYR 126 n 33 TYR 126 B SER 127 n 34 SER 127 B PRO 128 n 35 PRO 128 B ALA 129 n 36 ALA 129 B LEU 130 n 37 LEU 130 B ASN 131 n 38 ASN 131 B LYS 132 n 39 LYS 132 B MET 133 n 40 MET 133 B PHE 134 n 41 PHE 134 B CYS 135 n 42 CYS 135 B GLN 136 n 43 GLN 136 B LEU 137 n 44 LEU 137 B ALA 138 n 45 ALA 138 B LYS 139 n 46 LYS 139 B THR 140 n 47 THR 140 B CYS 141 n 48 CYS 141 B PRO 142 n 49 PRO 142 B VAL 143 n 50 VAL 143 B GLN 144 n 51 GLN 144 B LEU 145 n 52 LEU 145 B TRP 146 n 53 TRP 146 B VAL 147 n 54 VAL 147 B ASP 148 n 55 ASP 148 B SER 149 n 56 SER 149 B THR 150 n 57 THR 150 B PRO 151 n 58 PRO 151 B PRO 152 n 59 PRO 152 B PRO 153 n 60 PRO 153 B GLY 154 n 61 GLY 154 B THR 155 n 62 THR 155 B ARG 156 n 63 ARG 156 B VAL 157 n 64 VAL 157 B ARG 158 n 65 ARG 158 B ALA 159 n 66 ALA 159 B MET 160 n 67 MET 160 B ALA 161 n 68 ALA 161 B ILE 162 n 69 ILE 162 B TYR 163 n 70 TYR 163 B LYS 164 n 71 LYS 164 B GLN 165 n 72 GLN 165 B SER 166 n 73 SER 166 B GLN 167 n 74 GLN 167 B HIS 168 n 75 HIS 168 B MET 169 n 76 MET 169 B THR 170 n 77 THR 170 B GLU 171 n 78 GLU 171 B VAL 172 n 79 VAL 172 B VAL 173 n 80 VAL 173 B ARG 174 n 81 ARG 174 B ARG 175 n 82 ARG 175 B CYS 176 n 83 CYS 176 B PRO 177 n 84 PRO 177 B HIS 178 n 85 HIS 178 B HIS 179 n 86 HIS 179 B GLU 180 n 87 GLU 180 B ARG 181 n 88 ARG 181 B CYS 182 n 89 CYS 182 B SER 183 n 90 SER 183 B ASP 184 n 91 ASP 184 B SER 185 n 92 SER 185 B ASP 186 n 93 ASP 186 B GLY 187 n 94 GLY 187 B LEU 188 n 95 LEU 188 B ALA 189 n 96 ALA 189 B PRO 190 n 97 PRO 190 B PRO 191 n 98 PRO 191 B GLN 192 n 99 GLN 192 B HIS 193 n 100 HIS 193 B LEU 194 n 101 LEU 194 B ILE 195 n 102 ILE 195 B ARG 196 n 103 ARG 196 B VAL 197 n 104 VAL 197 B GLU 198 n 105 GLU 198 B GLY 199 n 106 GLY 199 B ASN 200 n 107 ASN 200 B LEU 201 n 108 LEU 201 B ARG 202 n 109 ARG 202 B VAL 203 n 110 VAL 203 B GLU 204 n 111 GLU 204 B TYR 205 n 112 TYR 205 B LEU 206 n 113 LEU 206 B ASP 207 n 114 ASP 207 B ASP 208 n 115 ASP 208 B ARG 209 n 116 ARG 209 B ASN 210 n 117 ASN 210 B THR 211 n 118 THR 211 B PHE 212 n 119 PHE 212 B ARG 213 n 120 ARG 213 B HIS 214 n 121 HIS 214 B SER 215 n 122 SER 215 B VAL 216 n 123 VAL 216 B VAL 217 n 124 VAL 217 B VAL 218 n 125 VAL 218 B PRO 219 n 126 PRO 219 B TYR 220 n 127 TYR 220 B GLU 221 n 128 GLU 221 B PRO 222 n 129 PRO 222 B PRO 223 n 130 PRO 223 B GLU 224 n 131 GLU 224 B VAL 225 n 132 VAL 225 B GLY 226 n 133 GLY 226 B SER 227 n 134 SER 227 B ASP 228 n 135 ASP 228 B CYS 229 n 136 CYS 229 B THR 230 n 137 THR 230 B THR 231 n 138 THR 231 B ILE 232 n 139 ILE 232 B HIS 233 n 140 HIS 233 B TYR 234 n 141 TYR 234 B ASN 235 n 142 ASN 235 B TYR 236 n 143 TYR 236 B MET 237 n 144 MET 237 B CYS 238 n 145 CYS 238 B ASN 239 n 146 ASN 239 B SER 240 n 147 SER 240 B SER 241 n 148 SER 241 B CYS 242 n 149 CYS 242 B MET 243 n 150 MET 243 B GLY 244 n 151 GLY 244 B GLY 245 n 152 GLY 245 B MET 246 n 153 MET 246 B ASN 247 n 154 ASN 247 B ARG 248 n 155 ARG 248 B ARG 249 n 156 ARG 249 B PRO 250 n 157 PRO 250 B ILE 251 n 158 ILE 251 B LEU 252 n 159 LEU 252 B THR 253 n 160 THR 253 B ILE 254 n 161 ILE 254 B ILE 255 n 162 ILE 255 B THR 256 n 163 THR 256 B LEU 257 n 164 LEU 257 B GLU 258 n 165 GLU 258 B ASP 259 n 166 ASP 259 B SER 260 n 167 SER 260 B SER 261 n 168 SER 261 B GLY 262 n 169 GLY 262 B ASN 263 n 170 ASN 263 B LEU 264 n 171 LEU 264 B LEU 265 n 172 LEU 265 B GLY 266 n 173 GLY 266 B ARG 267 n 174 ARG 267 B ASN 268 n 175 ASN 268 B SER 269 n 176 SER 269 B PHE 270 n 177 PHE 270 B GLU 271 n 178 GLU 271 B VAL 272 n 179 VAL 272 B ARG 273 n 180 ARG 273 B VAL 274 n 181 VAL 274 B CYS 275 n 182 CYS 275 B ALA 276 n 183 ALA 276 B CYS 277 n 184 CYS 277 B PRO 278 n 185 PRO 278 B GLY 279 n 186 GLY 279 B ARG 280 n 187 ARG 280 B ASP 281 n 188 ASP 281 B ARG 282 n 189 ARG 282 B ARG 283 n 190 ARG 283 B THR 284 n 191 THR 284 B GLU 285 n 192 GLU 285 B GLU 286 n 193 GLU 286 B GLU 287 n 194 GLU 287 B ASN 288 n 195 ASN 288 B LEU 289 n 196 LEU 289 B ARG 290 n 197 ARG 290 B LYS 291 n 198 LYS 291 B n 199 292 B n 200 293 B author_defined_assembly 8 octameric A CYS 176 C SG CYS 83 1_555 A ZN 1 E ZN ZN 1_555 A HIS 179 C ND1 HIS 86 1_555 107.4 A CYS 176 C SG CYS 83 1_555 A ZN 1 E ZN ZN 1_555 A CYS 238 C SG CYS 145 1_555 105.0 A HIS 179 C ND1 HIS 86 1_555 A ZN 1 E ZN ZN 1_555 A CYS 238 C SG CYS 145 1_555 110.2 A CYS 176 C SG CYS 83 1_555 A ZN 1 E ZN ZN 1_555 A CYS 242 C SG CYS 149 1_555 113.8 A HIS 179 C ND1 HIS 86 1_555 A ZN 1 E ZN ZN 1_555 A CYS 242 C SG CYS 149 1_555 107.3 A CYS 238 C SG CYS 145 1_555 A ZN 1 E ZN ZN 1_555 A CYS 242 C SG CYS 149 1_555 113.1 B CYS 176 D SG CYS 83 1_555 B ZN 1 F ZN ZN 1_555 B HIS 179 D ND1 HIS 86 1_555 105.5 B CYS 176 D SG CYS 83 1_555 B ZN 1 F ZN ZN 1_555 B CYS 238 D SG CYS 145 1_555 108.8 B HIS 179 D ND1 HIS 86 1_555 B ZN 1 F ZN ZN 1_555 B CYS 238 D SG CYS 145 1_555 102.6 B CYS 176 D SG CYS 83 1_555 B ZN 1 F ZN ZN 1_555 B CYS 242 D SG CYS 149 1_555 118.7 B HIS 179 D ND1 HIS 86 1_555 B ZN 1 F ZN ZN 1_555 B CYS 242 D SG CYS 149 1_555 111.1 B CYS 238 D SG CYS 145 1_555 B ZN 1 F ZN ZN 1_555 B CYS 242 D SG CYS 149 1_555 108.8 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 2_556 -x,y,-z+1 crystal symmetry operation -3.8854101481 0.0000000000 74.8882748431 A N ARG 110 C N ARG 17 A O TRP 146 C O TRP 53 A N VAL 143 C N VAL 50 A O ILE 232 C O ILE 139 A O ASN 235 C O ASN 142 A N ARG 196 C N ARG 103 A N THR 125 C N THR 32 A O PHE 134 C O PHE 41 A N MET 133 C N MET 40 A O GLU 271 C O GLU 178 A O PHE 270 C O PHE 177 A N THR 253 C N THR 160 A O THR 256 C O THR 163 A N ARG 158 C N ARG 65 A N VAL 157 C N VAL 64 A O VAL 218 C O VAL 125 A O SER 215 C O SER 122 A N LEU 206 C N LEU 113 B N GLY 112 D N GLY 19 B O GLN 144 D O GLN 51 B N LEU 145 D N LEU 52 B O THR 230 D O THR 137 B O ASN 235 D O ASN 142 B N ARG 196 D N ARG 103 B N THR 125 D N THR 32 B O PHE 134 D O PHE 41 B N MET 133 D N MET 40 B O GLU 271 D O GLU 178 B O VAL 272 D O VAL 179 B N ILE 251 D N ILE 158 B O ILE 254 D O ILE 161 B N MET 160 D N MET 67 B N VAL 157 D N VAL 64 B O VAL 218 D O VAL 125 B O VAL 217 D O VAL 124 B N GLU 204 D N GLU 111 1 A CG ARG 290 C CG ARG 197 1 Y 1 A CD ARG 290 C CD ARG 197 1 Y 1 A NE ARG 290 C NE ARG 197 1 Y 1 A CZ ARG 290 C CZ ARG 197 1 Y 1 A NH1 ARG 290 C NH1 ARG 197 1 Y 1 A NH2 ARG 290 C NH2 ARG 197 1 Y 1 A CG LYS 291 C CG LYS 198 1 Y 1 A CD LYS 291 C CD LYS 198 1 Y 1 A CE LYS 291 C CE LYS 198 1 Y 1 A NZ LYS 291 C NZ LYS 198 1 Y 1 A CA LYS 292 C CA LYS 199 1 Y 1 A C LYS 292 C C LYS 199 1 Y 1 A O LYS 292 C O LYS 199 1 Y 1 A CB LYS 292 C CB LYS 199 1 Y 1 A CG LYS 292 C CG LYS 199 1 Y 1 A CD LYS 292 C CD LYS 199 1 Y 1 A CE LYS 292 C CE LYS 199 1 Y 1 A NZ LYS 292 C NZ LYS 199 1 Y 1 B C LYS 291 D C LYS 198 1 Y 1 B O LYS 291 D O LYS 198 1 Y 1 B CB LYS 291 D CB LYS 198 1 Y 1 B CG LYS 291 D CG LYS 198 1 Y 1 B CD LYS 291 D CD LYS 198 1 Y 1 B CE LYS 291 D CE LYS 198 1 Y 1 B NZ LYS 291 D NZ LYS 198 1 Y 1 A SER 94 C SER 1 1 Y 1 A GLY 293 C GLY 200 1 Y 1 B LYS 292 D LYS 199 1 Y 1 B GLY 293 D GLY 200 1 Y 1 A A O O HOH HOH 347 372 2.06 1 F F C5' O DA HOH 4 23 2.08 1 A A O O CYS HOH 229 347 2.11 1 B B OE2 O GLU HOH 258 360 2.11 1 B B O N ALA SER 119 121 2.12 1 F F OP2 O DG HOH 2 22 2.13 1 A A O O LEU HOH 265 351 2.15 1 E B O O HOH HOH 204 330 2.16 1 B B O O HOH HOH 366 367 2.17 1 A A O O HOH HOH 396 397 2.17 1 B B ND1 O HIS HOH 214 325 2.19 1 5.92 0.30 108.30 114.22 E E E O4' C1' N1 DC DC DC 1 1 1 N 1 -5.00 0.80 109.40 104.40 E E E O5' C5' C4' DA DA DA 4 4 4 N 1 6.62 0.30 108.30 114.92 E E E O4' C1' N9 DA DA DA 4 4 4 N 1 -7.85 1.00 110.10 102.25 E E E C1' O4' C4' DC DC DC 5 5 5 N 1 -5.77 0.80 102.40 96.63 E E E C3' C2' C1' DC DC DC 5 5 5 N 1 8.98 0.30 108.30 117.28 E E E O4' C1' N1 DC DC DC 5 5 5 N 1 8.45 1.40 114.30 122.75 E E E N9 C1' C2' DA DA DA 6 6 6 N 1 -8.11 0.70 108.00 99.89 E E E O4' C1' N9 DA DA DA 6 6 6 N 1 5.92 0.30 108.30 114.22 E E E O4' C1' N1 DT DT DT 7 7 7 N 1 -3.95 0.60 122.30 118.35 E E E N3 C2 O2 DT DT DT 7 7 7 N 1 5.04 0.30 108.30 113.34 E E E O4' C1' N9 DG DG DG 8 8 8 N 1 2.51 0.40 110.80 113.31 E E E C4 C5 N7 DG DG DG 8 8 8 N 1 4.31 0.60 119.90 124.21 E E E N1 C6 O6 DG DG DG 8 8 8 N 1 -3.63 0.60 128.60 124.97 E E E C5 C6 O6 DG DG DG 8 8 8 N 1 5.84 0.30 108.30 114.14 E E E O4' C1' N9 DG DG DG 12 12 12 N 1 4.02 0.60 118.90 122.92 F F F N1 C2 O2 DC DC DC 1 1 1 N 1 -4.44 0.70 108.00 103.56 F F F O4' C1' N9 DG DG DG 2 2 2 N 1 3.52 0.30 108.30 111.82 F F F O4' C1' N9 DG DG DG 3 3 3 N 1 3.37 0.50 111.50 114.87 F F F C5 C6 N1 DG DG DG 3 3 3 N 1 4.02 0.50 106.80 110.82 F F F O4' C1' C2' DA DA DA 4 4 4 N 1 8.90 0.30 108.30 117.20 F F F O4' C1' N9 DA DA DA 4 4 4 N 1 9.41 1.50 119.60 129.01 F F F OP1 P OP2 DC DC DC 5 5 5 N 1 -8.64 0.90 105.70 97.06 F F F O5' P OP2 DC DC DC 5 5 5 N 1 -9.13 0.80 109.40 100.27 F F F O5' C5' C4' DC DC DC 5 5 5 N 1 -9.15 1.00 110.10 100.95 F F F C1' O4' C4' DC DC DC 5 5 5 N 1 -15.12 2.50 109.70 94.58 F F F C4' C3' O3' DC DC DC 5 5 5 N 1 -5.84 0.80 105.90 100.06 F F F O4' C1' C2' DC DC DC 5 5 5 N 1 -6.11 1.00 110.10 103.99 F F F C1' O4' C4' DT DT DT 7 7 7 N 1 -6.19 0.80 102.40 96.21 F F F C3' C2' C1' DT DT DT 7 7 7 N 1 -7.40 0.80 105.90 98.50 F F F O4' C1' C2' DT DT DT 7 7 7 N 1 3.13 0.30 108.30 111.43 F F F O4' C1' N1 DT DT DT 7 7 7 N 1 1.86 0.30 108.30 110.16 F F F O4' C1' N9 DG DG DG 8 8 8 N 1 3.88 0.60 119.00 122.88 F F F C4 C5 C7 DT DT DT 9 9 9 N 1 -4.47 0.60 122.90 118.43 F F F C6 C5 C7 DT DT DT 9 9 9 N 1 2.58 0.30 108.30 110.88 F F F O4' C1' N1 DC DC DC 10 10 10 N 1 2.43 0.40 121.90 124.33 F F F N3 C4 C5 DC DC DC 10 10 10 N 1 4.55 0.50 106.80 111.35 F F F O4' C1' C2' DC DC DC 11 11 11 N 1 2.72 0.30 108.30 111.02 F F F O4' C1' N1 DC DC DC 11 11 11 N 1 2.67 0.30 108.30 110.97 F F F O4' C1' N9 DG DG DG 12 12 12 N 1 E E O3' C3' DG DG 2 2 -0.059 0.006 1.419 1.360 N 1 E E O3' C3' DT DT 7 7 -0.072 0.006 1.419 1.347 N 1 E E O3' C3' DG DG 8 8 -0.041 0.006 1.419 1.378 N 1 F F O3' C3' DC DC 5 5 -0.058 0.006 1.419 1.361 N 1 F F O3' C3' DA DA 6 6 -0.043 0.006 1.419 1.376 N 1 B B CB SG CYS CYS 182 182 -0.108 0.016 1.812 1.704 N 1 A PRO 152 -67.44 -177.57 1 A SER 183 30.23 64.87 1 A GLU 224 -58.07 175.65 1 A VAL 225 -41.18 98.96 1 A ARG 248 86.01 0.78 1 B SER 116 -142.04 -19.90 1 B ALA 119 -63.40 87.70 1 B LYS 120 -2.34 -34.04 1 B PRO 153 -25.98 128.72 1 B ASN 210 -91.35 -67.75 1 B PRO 223 -53.35 -175.18 1 B ASP 259 -68.52 -159.64 1 B LEU 265 -141.72 -24.48 1 B CYS 277 -113.91 78.50 36.501 -0.770 0.000 -1.440 -0.680 0.000 1.300 0.949 0.882 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.251 0.164 0.169 0.169 2.500 37.530 773 16113 15517 5.000 96.310 10.455 0.236 RANDOM 1 ISOTROPIC THROUGHOUT 0.00 MOLECULAR REPLACEMENT 0.327 0.800 0.800 1.200 PDB ENTRY 1TSR MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 2.500 37.530 213 3792 2 486 3091 0.016 0.021 3706 1.999 2.128 5126 7.137 5.000 395 35.826 22.381 147 20.083 15.000 525 20.202 15.000 35 0.109 0.200 561 0.007 0.020 2697 0.237 0.200 1764 0.318 0.200 2407 0.222 0.200 286 0.265 0.200 76 0.273 0.200 16 2.412 3.000 2031 3.909 5.000 3217 5.961 7.000 2046 8.094 10.000 1908 0.314 0.184 2.562 51 973 20 91.020 44.5 2.5 38. 2ADY 16113 15517 0 0 0.114 1 12.8 4.2 96.2 0.443 2.5 2.56 2.9 1029 4.0 98.4 refinement Murshudov, G.N. ccp4@dl.ac.uk Fortran http://www.ccp4.ac.uk/main.html REFMAC program 5.2.0005 data extraction PDB sw-help@rcsb.rutgers.edu May. 30, 2005 C++ http://pdb.rutgers.edu/software/ PDB_EXTRACT package 1.700 data reduction DENZO data scaling SCALEPACK phasing CNS Structural Basis of DNA Recognition by p53 Tetramers (complex IV) 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N 4 N N 4 N N 4 N N 4 N N A CYS 176 C CYS 83 HELX_P A ARG 181 C ARG 88 1 1 6 A CYS 277 C CYS 184 HELX_P A ASN 288 C ASN 195 1 2 12 B CYS 176 D CYS 83 HELX_P B ARG 181 D ARG 88 1 3 6 B CYS 277 D CYS 184 HELX_P B ASN 288 D ASN 195 1 4 12 metalc 2.410 A ZN 1 E ZN ZN 1_555 A CYS 176 C SG CYS 83 1_555 metalc 2.102 A ZN 1 E ZN ZN 1_555 A HIS 179 C ND1 HIS 86 1_555 metalc 2.307 A ZN 1 E ZN ZN 1_555 A CYS 238 C SG CYS 145 1_555 metalc 2.294 A ZN 1 E ZN ZN 1_555 A CYS 242 C SG CYS 149 1_555 metalc 2.467 B ZN 1 F ZN ZN 1_555 B CYS 176 D SG CYS 83 1_555 metalc 2.076 B ZN 1 F ZN ZN 1_555 B HIS 179 D ND1 HIS 86 1_555 metalc 2.230 B ZN 1 F ZN ZN 1_555 B CYS 238 D SG CYS 145 1_555 metalc 2.265 B ZN 1 F ZN ZN 1_555 B CYS 242 D SG CYS 149 1_555 hydrog WATSON-CRICK E DC 1 A N3 DC 1 1_555 F DG 12 B N1 DG 12 1_555 hydrog WATSON-CRICK E DC 1 A N4 DC 1 1_555 F DG 12 B O6 DG 12 1_555 hydrog WATSON-CRICK E DC 1 A O2 DC 1 1_555 F DG 12 B N2 DG 12 1_555 hydrog WATSON-CRICK E DG 2 A N1 DG 2 1_555 F DC 11 B N3 DC 11 1_555 hydrog WATSON-CRICK E DG 2 A N2 DG 2 1_555 F DC 11 B O2 DC 11 1_555 hydrog WATSON-CRICK E DG 2 A O6 DG 2 1_555 F DC 11 B N4 DC 11 1_555 hydrog WATSON-CRICK E DG 3 A N1 DG 3 1_555 F DC 10 B N3 DC 10 1_555 hydrog WATSON-CRICK E DG 3 A N2 DG 3 1_555 F DC 10 B O2 DC 10 1_555 hydrog WATSON-CRICK E DG 3 A O6 DG 3 1_555 F DC 10 B N4 DC 10 1_555 hydrog WATSON-CRICK E DA 4 A N1 DA 4 1_555 F DT 9 B N3 DT 9 1_555 hydrog WATSON-CRICK E DA 4 A N6 DA 4 1_555 F DT 9 B O4 DT 9 1_555 hydrog WATSON-CRICK E DC 5 A N3 DC 5 1_555 F DG 8 B N1 DG 8 1_555 hydrog WATSON-CRICK E DC 5 A N4 DC 5 1_555 F DG 8 B O6 DG 8 1_555 hydrog WATSON-CRICK E DC 5 A O2 DC 5 1_555 F DG 8 B N2 DG 8 1_555 hydrog WATSON-CRICK E DA 6 A N1 DA 6 1_555 F DT 7 B N3 DT 7 1_555 hydrog WATSON-CRICK E DA 6 A N6 DA 6 1_555 F DT 7 B O4 DT 7 1_555 hydrog WATSON-CRICK E DT 7 A N3 DT 7 1_555 F DA 6 B N1 DA 6 1_555 hydrog WATSON-CRICK E DT 7 A O4 DT 7 1_555 F DA 6 B N6 DA 6 1_555 hydrog WATSON-CRICK E DG 8 A N1 DG 8 1_555 F DC 5 B N3 DC 5 1_555 hydrog WATSON-CRICK E DG 8 A N2 DG 8 1_555 F DC 5 B O2 DC 5 1_555 hydrog WATSON-CRICK E DG 8 A O6 DG 8 1_555 F DC 5 B N4 DC 5 1_555 hydrog WATSON-CRICK E DT 9 A N3 DT 9 1_555 F DA 4 B N1 DA 4 1_555 hydrog WATSON-CRICK E DT 9 A O4 DT 9 1_555 F DA 4 B N6 DA 4 1_555 hydrog WATSON-CRICK E DC 10 A N3 DC 10 1_555 F DG 3 B N1 DG 3 1_555 hydrog WATSON-CRICK E DC 10 A N4 DC 10 1_555 F DG 3 B O6 DG 3 1_555 hydrog WATSON-CRICK E DC 10 A O2 DC 10 1_555 F DG 3 B N2 DG 3 1_555 hydrog WATSON-CRICK E DC 11 A N3 DC 11 1_555 F DG 2 B N1 DG 2 1_555 hydrog WATSON-CRICK E DC 11 A N4 DC 11 1_555 F DG 2 B O6 DG 2 1_555 hydrog WATSON-CRICK E DC 11 A O2 DC 11 1_555 F DG 2 B N2 DG 2 1_555 APOPTOSIS/DNA Protein-DNA complexes, APOPTOSIS-DNA COMPLEX P53_HUMAN UNP 2 94 P04637 2ADY PDB 1 2ADY 94 293 2ADY 94 293 P04637 A 1 1 200 94 293 2ADY 94 293 P04637 B 1 1 200 1 12 2ADY 1 12 2ADY E 2 1 12 1 12 2ADY 1 12 2ADY F 2 1 12 4 7 4 7 anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel A ARG 110 C ARG 17 A PHE 113 C PHE 20 A CYS 141 C CYS 48 A TRP 146 C TRP 53 A THR 230 C THR 137 A TYR 236 C TYR 143 A ILE 195 C ILE 102 A GLU 198 C GLU 105 A CYS 124 C CYS 31 A SER 127 C SER 34 A LYS 132 C LYS 39 A CYS 135 C CYS 42 A LEU 264 C LEU 171 A VAL 274 C VAL 181 A ILE 251 C ILE 158 A GLU 258 C GLU 165 A ARG 156 C ARG 63 A TYR 163 C TYR 70 A HIS 214 C HIS 121 A PRO 219 C PRO 126 A GLU 204 C GLU 111 A ASP 207 C ASP 114 B ARG 110 D ARG 17 B GLY 112 D GLY 19 B CYS 141 D CYS 48 B TRP 146 D TRP 53 B CYS 229 D CYS 136 B TYR 236 D TYR 143 B ILE 195 D ILE 102 B VAL 197 D VAL 104 B CYS 124 D CYS 31 B SER 127 D SER 34 B LYS 132 D LYS 39 B CYS 135 D CYS 42 B LEU 264 D LEU 171 B VAL 274 D VAL 181 B ILE 251 D ILE 158 B GLU 258 D GLU 165 B ARG 156 D ARG 63 B TYR 163 D TYR 70 B HIS 214 D HIS 121 B PRO 219 D PRO 126 B GLU 204 D GLU 111 B ASP 207 D ASP 114 BINDING SITE FOR RESIDUE ZN A 1 A ZN 1 Software 4 BINDING SITE FOR RESIDUE ZN B 1 B ZN 1 Software 4 A CYS 176 C CYS 83 4 1_555 A HIS 179 C HIS 86 4 1_555 A CYS 238 C CYS 145 4 1_555 A CYS 242 C CYS 149 4 1_555 B CYS 176 D CYS 83 4 1_555 B HIS 179 D HIS 86 4 1_555 B CYS 238 D CYS 145 4 1_555 B CYS 242 D CYS 149 4 1_555 5 C 1 2 1