0.012598 0.007273 0.000000 0.000000 0.014546 0.000000 0.000000 0.000000 0.002977 0.00000 0.00000 0.00000 Roussel, A. Lescar, J. Vaney, M.C. Wengler, G. Wengler, G. Rey, F.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 79.380 79.380 335.910 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Structure STRUE6 2005 0969-2126 14 75 86 10.1016/j.str.2005.09.014 16407067 Structure and interactions at the viral surface of the envelope protein E1 of Semliki Forest virus. 2006 US Cell(Cambridge,Mass.) CELLB5 0998 0092-8674 105 137 148 10.1016/S0092-8674(01)00303-8 11301009 The fusion glycoprotein shell of Semliki Forest Virus: an icosahedral assembly primed for fusogenic activation at endosomal pH. 2001 UK Nature NATUAS 0006 0028-0836 427 320 325 10.1038/nature02239 14737160 Conformational change and protein-protein interactions of the fusion protein of Semliki Forest virus. 2004 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 1998-09-29 GRAPHITE SINGLE WAVELENGTH M x-ray 1 0.945 1.0 BM14 ESRF 0.945 SYNCHROTRON ESRF BEAMLINE BM14 42690.125 Structural polyprotein (P130) Spike glycoprotein E1 1 nat polymer 18.015 water 88 nat water no no YEHSTVMPNVVGFPYKAHIERPGYSPLTLQMQVVETSLEPTLNLEYITCEYKTVVPSPYVKCCGASECSTKEKPDYQCKV YTGVYPFMWGGAYCFCDSENTQLSEAYVDRSDVCRHDHASAYKAHTASLKAKVRVMYGNVNQTVDVYVNGDHAVTIGGTQ FIFGPLSSAWTPFDNKIVVYKDEVFNQDFPPYGSGQPGRFGDIQSRTVESNDLYANTALKLARPSPGMVHVPYTQTPSGF KYWLKEKGTALNTKAPFGCQIKTNPVRAMNCAVGNIPVSMNLPDSAFTRIVEAPTIIDLTCTVATCTHSSDFGGVLTLTY KTNKNGDCSVHSHSNVATLQEATAKVKTAGKVTLHFSTASASPSFVVSLCSARATCSASCEPPKDHIVPYA YEHSTVMPNVVGFPYKAHIERPGYSPLTLQMQVVETSLEPTLNLEYITCEYKTVVPSPYVKCCGASECSTKEKPDYQCKV YTGVYPFMWGGAYCFCDSENTQLSEAYVDRSDVCRHDHASAYKAHTASLKAKVRVMYGNVNQTVDVYVNGDHAVTIGGTQ FIFGPLSSAWTPFDNKIVVYKDEVFNQDFPPYGSGQPGRFGDIQSRTVESNDLYANTALKLARPSPGMVHVPYTQTPSGF KYWLKEKGTALNTKAPFGCQIKTNPVRAMNCAVGNIPVSMNLPDSAFTRIVEAPTIIDLTCTVATCTHSSDFGGVLTLTY KTNKNGDCSVHSHSNVATLQEATAKVKTAGKVTLHFSTASASPSFVVSLCSARATCSASCEPPKDHIVPYA A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Alphavirus sample 11033 Semliki forest virus 1 3.6 63 EVAPORATION 8.1 PEG 8K, pH 8.1, EVAPORATION, temperature 293K 293 repository Initial release Version format compliance Advisory Refinement description Version format compliance 1 0 2006-01-17 1 1 2008-04-30 1 2 2011-07-13 Crystal Structure Of The Fusion Glycoprotein E1 From Semliki Forest Virus. Only the Carbon alpha atoms. Crystal Structure Of The Homotrimer Of Fusion Glycoprotein E1 From Semliki Forest Virus in its post-fusion trimeric form. RCSB Y RCSB 2005-08-05 REL REL HOH water HOH 1 2 HOH HOH 392 A HOH 2 2 HOH HOH 393 A HOH 3 2 HOH HOH 394 A HOH 4 2 HOH HOH 395 A HOH 5 2 HOH HOH 396 A HOH 6 2 HOH HOH 397 A HOH 7 2 HOH HOH 398 A HOH 8 2 HOH HOH 399 A HOH 9 2 HOH HOH 400 A HOH 10 2 HOH HOH 401 A HOH 11 2 HOH HOH 402 A HOH 12 2 HOH HOH 403 A HOH 13 2 HOH HOH 404 A HOH 14 2 HOH HOH 405 A HOH 15 2 HOH HOH 406 A HOH 16 2 HOH HOH 407 A HOH 17 2 HOH HOH 408 A HOH 18 2 HOH HOH 409 A HOH 19 2 HOH HOH 410 A HOH 20 2 HOH HOH 411 A HOH 21 2 HOH HOH 412 A HOH 22 2 HOH HOH 413 A HOH 23 2 HOH HOH 414 A HOH 24 2 HOH HOH 415 A HOH 25 2 HOH HOH 416 A HOH 26 2 HOH HOH 417 A HOH 27 2 HOH HOH 418 A HOH 28 2 HOH HOH 419 A HOH 29 2 HOH HOH 420 A HOH 30 2 HOH HOH 421 A HOH 31 2 HOH HOH 422 A HOH 32 2 HOH HOH 423 A HOH 33 2 HOH HOH 424 A HOH 34 2 HOH HOH 425 A HOH 35 2 HOH HOH 426 A HOH 36 2 HOH HOH 427 A HOH 37 2 HOH HOH 428 A HOH 38 2 HOH HOH 429 A HOH 39 2 HOH HOH 430 A HOH 40 2 HOH HOH 431 A HOH 41 2 HOH HOH 432 A HOH 42 2 HOH HOH 433 A HOH 43 2 HOH HOH 434 A HOH 44 2 HOH HOH 435 A HOH 45 2 HOH HOH 436 A HOH 46 2 HOH HOH 437 A HOH 47 2 HOH HOH 438 A HOH 48 2 HOH HOH 439 A HOH 49 2 HOH HOH 440 A HOH 50 2 HOH HOH 441 A HOH 51 2 HOH HOH 442 A HOH 52 2 HOH HOH 443 A HOH 53 2 HOH HOH 444 A HOH 54 2 HOH HOH 445 A HOH 55 2 HOH HOH 446 A HOH 56 2 HOH HOH 447 A HOH 57 2 HOH HOH 448 A HOH 58 2 HOH HOH 449 A HOH 59 2 HOH HOH 450 A HOH 60 2 HOH HOH 451 A HOH 61 2 HOH HOH 452 A HOH 62 2 HOH HOH 453 A HOH 63 2 HOH HOH 454 A HOH 64 2 HOH HOH 455 A HOH 65 2 HOH HOH 456 A HOH 66 2 HOH HOH 457 A HOH 67 2 HOH HOH 458 A HOH 68 2 HOH HOH 459 A HOH 69 2 HOH HOH 460 A HOH 70 2 HOH HOH 461 A HOH 71 2 HOH HOH 462 A HOH 72 2 HOH HOH 463 A HOH 73 2 HOH HOH 464 A HOH 74 2 HOH HOH 465 A HOH 75 2 HOH HOH 466 A HOH 76 2 HOH HOH 467 A HOH 77 2 HOH HOH 468 A HOH 78 2 HOH HOH 469 A HOH 79 2 HOH HOH 470 A HOH 80 2 HOH HOH 471 A HOH 81 2 HOH HOH 472 A HOH 82 2 HOH HOH 473 A HOH 83 2 HOH HOH 474 A HOH 84 2 HOH HOH 475 A HOH 85 2 HOH HOH 476 A HOH 86 2 HOH HOH 477 A HOH 87 2 HOH HOH 478 A HOH 88 2 HOH HOH 479 A TYR 1 n 1 TYR 1 A GLU 2 n 2 GLU 2 A HIS 3 n 3 HIS 3 A SER 4 n 4 SER 4 A THR 5 n 5 THR 5 A VAL 6 n 6 VAL 6 A MET 7 n 7 MET 7 A PRO 8 n 8 PRO 8 A ASN 9 n 9 ASN 9 A VAL 10 n 10 VAL 10 A VAL 11 n 11 VAL 11 A GLY 12 n 12 GLY 12 A PHE 13 n 13 PHE 13 A PRO 14 n 14 PRO 14 A TYR 15 n 15 TYR 15 A LYS 16 n 16 LYS 16 A ALA 17 n 17 ALA 17 A HIS 18 n 18 HIS 18 A ILE 19 n 19 ILE 19 A GLU 20 n 20 GLU 20 A ARG 21 n 21 ARG 21 A PRO 22 n 22 PRO 22 A GLY 23 n 23 GLY 23 A TYR 24 n 24 TYR 24 A SER 25 n 25 SER 25 A PRO 26 n 26 PRO 26 A LEU 27 n 27 LEU 27 A THR 28 n 28 THR 28 A LEU 29 n 29 LEU 29 A GLN 30 n 30 GLN 30 A MET 31 n 31 MET 31 A GLN 32 n 32 GLN 32 A VAL 33 n 33 VAL 33 A VAL 34 n 34 VAL 34 A GLU 35 n 35 GLU 35 A THR 36 n 36 THR 36 A SER 37 n 37 SER 37 A LEU 38 n 38 LEU 38 A GLU 39 n 39 GLU 39 A PRO 40 n 40 PRO 40 A THR 41 n 41 THR 41 A LEU 42 n 42 LEU 42 A ASN 43 n 43 ASN 43 A LEU 44 n 44 LEU 44 A GLU 45 n 45 GLU 45 A TYR 46 n 46 TYR 46 A ILE 47 n 47 ILE 47 A THR 48 n 48 THR 48 A CYS 49 n 49 CYS 49 A GLU 50 n 50 GLU 50 A TYR 51 n 51 TYR 51 A LYS 52 n 52 LYS 52 A THR 53 n 53 THR 53 A VAL 54 n 54 VAL 54 A VAL 55 n 55 VAL 55 A PRO 56 n 56 PRO 56 A SER 57 n 57 SER 57 A PRO 58 n 58 PRO 58 A TYR 59 n 59 TYR 59 A VAL 60 n 60 VAL 60 A LYS 61 n 61 LYS 61 A CYS 62 n 62 CYS 62 A CYS 63 n 63 CYS 63 A GLY 64 n 64 GLY 64 A ALA 65 n 65 ALA 65 A SER 66 n 66 SER 66 A GLU 67 n 67 GLU 67 A CYS 68 n 68 CYS 68 A SER 69 n 69 SER 69 A THR 70 n 70 THR 70 A LYS 71 n 71 LYS 71 A GLU 72 n 72 GLU 72 A LYS 73 n 73 LYS 73 A PRO 74 n 74 PRO 74 A ASP 75 n 75 ASP 75 A TYR 76 n 76 TYR 76 A GLN 77 n 77 GLN 77 A CYS 78 n 78 CYS 78 A LYS 79 n 79 LYS 79 A VAL 80 n 80 VAL 80 A TYR 81 n 81 TYR 81 A THR 82 n 82 THR 82 A GLY 83 n 83 GLY 83 A VAL 84 n 84 VAL 84 A TYR 85 n 85 TYR 85 A PRO 86 n 86 PRO 86 A PHE 87 n 87 PHE 87 A MET 88 n 88 MET 88 A TRP 89 n 89 TRP 89 A GLY 90 n 90 GLY 90 A GLY 91 n 91 GLY 91 A ALA 92 n 92 ALA 92 A TYR 93 n 93 TYR 93 A CYS 94 n 94 CYS 94 A PHE 95 n 95 PHE 95 A CYS 96 n 96 CYS 96 A ASP 97 n 97 ASP 97 A SER 98 n 98 SER 98 A GLU 99 n 99 GLU 99 A ASN 100 n 100 ASN 100 A THR 101 n 101 THR 101 A GLN 102 n 102 GLN 102 A LEU 103 n 103 LEU 103 A SER 104 n 104 SER 104 A GLU 105 n 105 GLU 105 A ALA 106 n 106 ALA 106 A TYR 107 n 107 TYR 107 A VAL 108 n 108 VAL 108 A ASP 109 n 109 ASP 109 A ARG 110 n 110 ARG 110 A SER 111 n 111 SER 111 A ASP 112 n 112 ASP 112 A VAL 113 n 113 VAL 113 A CYS 114 n 114 CYS 114 A ARG 115 n 115 ARG 115 A HIS 116 n 116 HIS 116 A ASP 117 n 117 ASP 117 A HIS 118 n 118 HIS 118 A ALA 119 n 119 ALA 119 A SER 120 n 120 SER 120 A ALA 121 n 121 ALA 121 A TYR 122 n 122 TYR 122 A LYS 123 n 123 LYS 123 A ALA 124 n 124 ALA 124 A HIS 125 n 125 HIS 125 A THR 126 n 126 THR 126 A ALA 127 n 127 ALA 127 A SER 128 n 128 SER 128 A LEU 129 n 129 LEU 129 A LYS 130 n 130 LYS 130 A ALA 131 n 131 ALA 131 A LYS 132 n 132 LYS 132 A VAL 133 n 133 VAL 133 A ARG 134 n 134 ARG 134 A VAL 135 n 135 VAL 135 A MET 136 n 136 MET 136 A TYR 137 n 137 TYR 137 A GLY 138 n 138 GLY 138 A ASN 139 n 139 ASN 139 A VAL 140 n 140 VAL 140 A ASN 141 n 141 ASN 141 A GLN 142 n 142 GLN 142 A THR 143 n 143 THR 143 A VAL 144 n 144 VAL 144 A ASP 145 n 145 ASP 145 A VAL 146 n 146 VAL 146 A TYR 147 n 147 TYR 147 A VAL 148 n 148 VAL 148 A ASN 149 n 149 ASN 149 A GLY 150 n 150 GLY 150 A ASP 151 n 151 ASP 151 A HIS 152 n 152 HIS 152 A ALA 153 n 153 ALA 153 A VAL 154 n 154 VAL 154 A THR 155 n 155 THR 155 A ILE 156 n 156 ILE 156 A GLY 157 n 157 GLY 157 A GLY 158 n 158 GLY 158 A THR 159 n 159 THR 159 A GLN 160 n 160 GLN 160 A PHE 161 n 161 PHE 161 A ILE 162 n 162 ILE 162 A PHE 163 n 163 PHE 163 A GLY 164 n 164 GLY 164 A PRO 165 n 165 PRO 165 A LEU 166 n 166 LEU 166 A SER 167 n 167 SER 167 A SER 168 n 168 SER 168 A ALA 169 n 169 ALA 169 A TRP 170 n 170 TRP 170 A THR 171 n 171 THR 171 A PRO 172 n 172 PRO 172 A PHE 173 n 173 PHE 173 A ASP 174 n 174 ASP 174 A ASN 175 n 175 ASN 175 A LYS 176 n 176 LYS 176 A ILE 177 n 177 ILE 177 A VAL 178 n 178 VAL 178 A VAL 179 n 179 VAL 179 A TYR 180 n 180 TYR 180 A LYS 181 n 181 LYS 181 A ASP 182 n 182 ASP 182 A GLU 183 n 183 GLU 183 A VAL 184 n 184 VAL 184 A PHE 185 n 185 PHE 185 A ASN 186 n 186 ASN 186 A GLN 187 n 187 GLN 187 A ASP 188 n 188 ASP 188 A PHE 189 n 189 PHE 189 A PRO 190 n 190 PRO 190 A PRO 191 n 191 PRO 191 A TYR 192 n 192 TYR 192 A GLY 193 n 193 GLY 193 A SER 194 n 194 SER 194 A GLY 195 n 195 GLY 195 A GLN 196 n 196 GLN 196 A PRO 197 n 197 PRO 197 A GLY 198 n 198 GLY 198 A ARG 199 n 199 ARG 199 A PHE 200 n 200 PHE 200 A GLY 201 n 201 GLY 201 A ASP 202 n 202 ASP 202 A ILE 203 n 203 ILE 203 A GLN 204 n 204 GLN 204 A SER 205 n 205 SER 205 A ARG 206 n 206 ARG 206 A THR 207 n 207 THR 207 A VAL 208 n 208 VAL 208 A GLU 209 n 209 GLU 209 A SER 210 n 210 SER 210 A ASN 211 n 211 ASN 211 A ASP 212 n 212 ASP 212 A LEU 213 n 213 LEU 213 A TYR 214 n 214 TYR 214 A ALA 215 n 215 ALA 215 A ASN 216 n 216 ASN 216 A THR 217 n 217 THR 217 A ALA 218 n 218 ALA 218 A LEU 219 n 219 LEU 219 A LYS 220 n 220 LYS 220 A LEU 221 n 221 LEU 221 A ALA 222 n 222 ALA 222 A ARG 223 n 223 ARG 223 A PRO 224 n 224 PRO 224 A SER 225 n 225 SER 225 A PRO 226 n 226 PRO 226 A GLY 227 n 227 GLY 227 A MET 228 n 228 MET 228 A VAL 229 n 229 VAL 229 A HIS 230 n 230 HIS 230 A VAL 231 n 231 VAL 231 A PRO 232 n 232 PRO 232 A TYR 233 n 233 TYR 233 A THR 234 n 234 THR 234 A GLN 235 n 235 GLN 235 A THR 236 n 236 THR 236 A PRO 237 n 237 PRO 237 A SER 238 n 238 SER 238 A GLY 239 n 239 GLY 239 A PHE 240 n 240 PHE 240 A LYS 241 n 241 LYS 241 A TYR 242 n 242 TYR 242 A TRP 243 n 243 TRP 243 A LEU 244 n 244 LEU 244 A LYS 245 n 245 LYS 245 A GLU 246 n 246 GLU 246 A LYS 247 n 247 LYS 247 A GLY 248 n 248 GLY 248 A THR 249 n 249 THR 249 A ALA 250 n 250 ALA 250 A LEU 251 n 251 LEU 251 A ASN 252 n 252 ASN 252 A THR 253 n 253 THR 253 A LYS 254 n 254 LYS 254 A ALA 255 n 255 ALA 255 A PRO 256 n 256 PRO 256 A PHE 257 n 257 PHE 257 A GLY 258 n 258 GLY 258 A CYS 259 n 259 CYS 259 A GLN 260 n 260 GLN 260 A ILE 261 n 261 ILE 261 A LYS 262 n 262 LYS 262 A THR 263 n 263 THR 263 A ASN 264 n 264 ASN 264 A PRO 265 n 265 PRO 265 A VAL 266 n 266 VAL 266 A ARG 267 n 267 ARG 267 A ALA 268 n 268 ALA 268 A MET 269 n 269 MET 269 A ASN 270 n 270 ASN 270 A CYS 271 n 271 CYS 271 A ALA 272 n 272 ALA 272 A VAL 273 n 273 VAL 273 A GLY 274 n 274 GLY 274 A ASN 275 n 275 ASN 275 A ILE 276 n 276 ILE 276 A PRO 277 n 277 PRO 277 A VAL 278 n 278 VAL 278 A SER 279 n 279 SER 279 A MET 280 n 280 MET 280 A ASN 281 n 281 ASN 281 A LEU 282 n 282 LEU 282 A PRO 283 n 283 PRO 283 A ASP 284 n 284 ASP 284 A SER 285 n 285 SER 285 A ALA 286 n 286 ALA 286 A PHE 287 n 287 PHE 287 A THR 288 n 288 THR 288 A ARG 289 n 289 ARG 289 A ILE 290 n 290 ILE 290 A VAL 291 n 291 VAL 291 A GLU 292 n 292 GLU 292 A ALA 293 n 293 ALA 293 A PRO 294 n 294 PRO 294 A THR 295 n 295 THR 295 A ILE 296 n 296 ILE 296 A ILE 297 n 297 ILE 297 A ASP 298 n 298 ASP 298 A LEU 299 n 299 LEU 299 A THR 300 n 300 THR 300 A CYS 301 n 301 CYS 301 A THR 302 n 302 THR 302 A VAL 303 n 303 VAL 303 A ALA 304 n 304 ALA 304 A THR 305 n 305 THR 305 A CYS 306 n 306 CYS 306 A THR 307 n 307 THR 307 A HIS 308 n 308 HIS 308 A SER 309 n 309 SER 309 A SER 310 n 310 SER 310 A ASP 311 n 311 ASP 311 A PHE 312 n 312 PHE 312 A GLY 313 n 313 GLY 313 A GLY 314 n 314 GLY 314 A VAL 315 n 315 VAL 315 A LEU 316 n 316 LEU 316 A THR 317 n 317 THR 317 A LEU 318 n 318 LEU 318 A THR 319 n 319 THR 319 A TYR 320 n 320 TYR 320 A LYS 321 n 321 LYS 321 A THR 322 n 322 THR 322 A ASN 323 n 323 ASN 323 A LYS 324 n 324 LYS 324 A ASN 325 n 325 ASN 325 A GLY 326 n 326 GLY 326 A ASP 327 n 327 ASP 327 A CYS 328 n 328 CYS 328 A SER 329 n 329 SER 329 A VAL 330 n 330 VAL 330 A HIS 331 n 331 HIS 331 A SER 332 n 332 SER 332 A HIS 333 n 333 HIS 333 A SER 334 n 334 SER 334 A ASN 335 n 335 ASN 335 A VAL 336 n 336 VAL 336 A ALA 337 n 337 ALA 337 A THR 338 n 338 THR 338 A LEU 339 n 339 LEU 339 A GLN 340 n 340 GLN 340 A GLU 341 n 341 GLU 341 A ALA 342 n 342 ALA 342 A THR 343 n 343 THR 343 A ALA 344 n 344 ALA 344 A LYS 345 n 345 LYS 345 A VAL 346 n 346 VAL 346 A LYS 347 n 347 LYS 347 A THR 348 n 348 THR 348 A ALA 349 n 349 ALA 349 A GLY 350 n 350 GLY 350 A LYS 351 n 351 LYS 351 A VAL 352 n 352 VAL 352 A THR 353 n 353 THR 353 A LEU 354 n 354 LEU 354 A HIS 355 n 355 HIS 355 A PHE 356 n 356 PHE 356 A SER 357 n 357 SER 357 A THR 358 n 358 THR 358 A ALA 359 n 359 ALA 359 A SER 360 n 360 SER 360 A ALA 361 n 361 ALA 361 A SER 362 n 362 SER 362 A PRO 363 n 363 PRO 363 A SER 364 n 364 SER 364 A PHE 365 n 365 PHE 365 A VAL 366 n 366 VAL 366 A VAL 367 n 367 VAL 367 A SER 368 n 368 SER 368 A LEU 369 n 369 LEU 369 A CYS 370 n 370 CYS 370 A SER 371 n 371 SER 371 A ALA 372 n 372 ALA 372 A ARG 373 n 373 ARG 373 A ALA 374 n 374 ALA 374 A THR 375 n 375 THR 375 A CYS 376 n 376 CYS 376 A SER 377 n 377 SER 377 A ALA 378 n 378 ALA 378 A SER 379 n 379 SER 379 A CYS 380 n 380 CYS 380 A GLU 381 n 381 GLU 381 A PRO 382 n 382 PRO 382 A PRO 383 n 383 PRO 383 A LYS 384 n 384 LYS 384 A n 385 385 A n 386 386 A n 387 387 A n 388 388 A n 389 389 A n 390 390 A n 391 391 A 1.9396 0.7149 -4.0373 1.3447 -2.6792 15.7642 0.6278 0.1654 -0.4139 0.1736 -0.4600 0.0164 -0.3230 -1.3362 -0.1678 0.7646 -0.1969 -0.1680 0.1518 0.0940 0.1139 refined -12.7080 51.6530 171.7650 X-RAY DIFFRACTION 3.6040 4.9019 5.0578 8.6947 -0.3157 19.6051 -0.8084 0.1537 0.7379 0.2863 0.3445 1.9061 -1.9592 -2.3632 0.4638 0.9151 0.0182 0.0174 0.9271 0.0499 0.9273 refined -38.0970 41.0540 217.2140 X-RAY DIFFRACTION A 1 A 289 X-RAY DIFFRACTION 1 A 290 A 384 X-RAY DIFFRACTION 2 author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N HIS 3 A N HIS 3 A O MET 280 A O MET 280 A O ILE 276 A O ILE 276 A N MET 7 A N MET 7 A N HIS 3 A N HIS 3 A O MET 280 A O MET 280 A O SER 279 A O SER 279 A N ILE 162 A N ILE 162 A O THR 159 A O THR 159 A N ILE 156 A N ILE 156 A N ALA 17 A N ALA 17 A O LEU 29 A O LEU 29 A N GLN 30 A N GLN 30 A O MET 136 A O MET 136 A N SER 120 A N SER 120 A O VAL 179 A O VAL 179 A N VAL 178 A N VAL 178 A O PHE 185 A O PHE 185 A O VAL 144 A O VAL 144 A N VAL 133 A N VAL 133 A O MET 136 A O MET 136 A N GLN 30 A N GLN 30 A N LEU 38 A N LEU 38 A O ALA 268 A O ALA 268 A O MET 269 A O MET 269 A N GLN 260 A N GLN 260 A N VAL 54 A N VAL 54 A O TYR 107 A O TYR 107 A O LEU 103 A O LEU 103 A N TYR 59 A N TYR 59 A N VAL 54 A N VAL 54 A O TYR 107 A O TYR 107 A O SER 104 A O SER 104 A N LYS 79 A N LYS 79 A N GLN 204 A N GLN 204 A O TYR 214 A O TYR 214 A N LYS 220 A N LYS 220 A O THR 234 A O THR 234 A N THR 302 A N THR 302 A O THR 317 A O THR 317 A N LEU 316 A N LEU 316 A O LEU 354 A O LEU 354 A O SER 357 A O SER 357 A N THR 338 A N THR 338 A N CYS 328 A N CYS 328 A O ALA 344 A O ALA 344 A N HIS 331 A N HIS 331 A O SER 368 A O SER 368 A N LEU 369 A N LEU 369 A O ALA 372 A O ALA 372 1 A HOH 412 B HOH 1 A HOH 430 B HOH 1 A ASP 385 A ASP 385 1 Y 1 A HIS 386 A HIS 386 1 Y 1 A ILE 387 A ILE 387 1 Y 1 A VAL 388 A VAL 388 1 Y 1 A PRO 389 A PRO 389 1 Y 1 A TYR 390 A TYR 390 1 Y 1 A ALA 391 A ALA 391 1 Y 1 A A ARG ILE 289 290 -148.89 1 A SER 4 -160.21 117.12 1 A HIS 18 -166.22 45.48 1 A SER 25 -47.95 157.30 1 A LEU 27 -10.49 90.68 1 A TYR 46 -171.25 -178.23 1 A GLU 72 -97.33 33.34 1 A PRO 86 -30.73 -87.93 1 A PHE 87 -104.56 -158.34 1 A ASP 97 -86.98 -78.34 1 A GLU 99 -64.24 9.63 1 A THR 126 -22.40 116.49 1 A ASN 139 -118.78 63.94 1 A TYR 180 -110.50 -94.59 1 A LYS 181 -88.95 -103.87 1 A SER 210 -38.59 130.45 1 A LEU 244 -68.90 3.34 1 A ASN 252 -51.34 -7.91 1 A HIS 308 -53.20 -79.34 1 A HIS 331 -172.87 139.91 1 A LYS 351 -161.92 107.83 1 A ALA 359 -154.02 51.00 1 A CYS 370 57.93 -116.34 4.062 -3.51 -1.76 0.00 -3.51 0.00 5.27 0.873 0.809 8 OF THE SOLVENT MOLECULES ADDED TO POSITIVE FOURIER DIFFERENCE PEAKS (ABOVE 3 SIGMA) ARE FURTHER THAN 3.5 ANGSTROMS AWAY FROM MACROMOLECULE. THE E1 PROTEIN IS GLYCOSYLATED at ASN 141. THE DENSITY WAS NOT CLEAR ENOUGH TO BUILD A SUGAR AT THIS LOCATION THUS WATER MOLECULES 71 AND 81 WERE PLACED INTO POSITIVE DENSITY NEAR THIS RESIDUE. 0.31868 0.26654 0.27199 3.00 39.0 1232 13467 10604 10.4 87.90 52.882 0.494 RANDOM LIKELY RESIDUAL 1 THROUGHOUT MIR 0.553 0.80 0.80 1.20 MAXIMUM LIKELIHOOD MASK 3.00 39.0 88 3023 0 0 2935 0.006 0.022 3020 0.001 0.020 2610 0.996 1.947 4125 0.707 3.000 6121 6.875 5.000 383 36.652 24.298 121 15.366 15.000 466 10.636 15.000 10 0.060 0.200 464 0.002 0.020 3366 0.001 0.020 589 0.175 0.200 697 0.158 0.200 2872 0.173 0.200 1471 0.078 0.200 1858 0.153 0.200 113 0.058 0.200 3 0.124 0.200 14 0.101 0.200 43 0.201 0.200 7 0.184 1.500 2457 0.017 1.500 768 0.210 2.000 3129 0.246 3.000 1310 0.378 4.500 996 0.536 0.38 3.077 72 657 20 76.10 3 39 2ALA 10666 10666 0 0 0.075 1 8.0 7.8 87.6 0.124 3.0 3.21 5.4 1 5.5 76.1 refinement REFMAC 5.2.0005 data reduction MOSFLM data scaling SCALEPACK phasing MLPHARE Structural polyprotein (P130) Crystal structure of the Semliki Forest Virus envelope protein E1 in its monomeric conformation. 1 N N 2 N N A SER 238 A SER 238 HELX_P A LYS 247 A LYS 247 1 1 10 A ALA 250 A ALA 250 HELX_P A LYS 254 A LYS 254 5 2 5 A ALA 255 A ALA 255 HELX_P A CYS 259 A CYS 259 5 3 5 A PRO 283 A PRO 283 HELX_P A PHE 287 A PHE 287 5 4 5 disulf 2.030 A CYS 49 A SG CYS 49 1_555 A CYS 114 A SG CYS 114 1_555 disulf 2.036 A CYS 62 A SG CYS 62 1_555 A CYS 94 A SG CYS 94 1_555 disulf 2.041 A CYS 63 A SG CYS 63 1_555 A CYS 96 A SG CYS 96 1_555 disulf 2.028 A CYS 68 A SG CYS 68 1_555 A CYS 78 A SG CYS 78 1_555 disulf 2.038 A CYS 259 A SG CYS 259 1_555 A CYS 271 A SG CYS 271 1_555 disulf 2.036 A CYS 301 A SG CYS 301 1_555 A CYS 376 A SG CYS 376 1_555 disulf 2.033 A CYS 306 A SG CYS 306 1_555 A CYS 380 A SG CYS 380 1_555 disulf 2.037 A CYS 328 A SG CYS 328 1_555 A CYS 370 A SG CYS 370 1_555 VIRAL PROTEIN Envelope glycoprotein, Membrane Fusion, Viral protein POLS_SFV UNP 1 816 P03315 YEHSTVMPNVVGFPYKAHIERPGYSPLTLQMQVVETSLEPTLNLEYITCEYKTVVPSPYVKCCGASECSTKEKPDYQCKV YTGVYPFMWGGAYCFCDSENTQLSEAYVDRSDVCRHDHASAYKAHTASLKAKVRVMYGNVNQTVDVYVNGDHAVTIGGTQ FIFGPLSSAWTPFDNKIVVYKDEVFNQDFPPYGSGQPGRFGDIQSRTVESNDLYANTALKLARPSPGMVHVPYTQTPSGF KYWLKEKGTALNTKAPFGCQIKTNPVRAMNCAVGNIPVSMNLPDSAFTRIVEAPTIIDLTCTVATCTHSSDFGGVLTLTY KTNKNGDCSVHSHSNVATLQEATAKVKTAGKVTLHFSTASASPSFVVSLCSARATCSASCEPPKDHIVPYA 816 1206 2ALA 1 391 P03315 A 1 1 391 3 4 5 5 3 3 2 2 4 2 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLU 2 A GLU 2 A HIS 3 A HIS 3 A ASN 275 A ASN 275 A ASN 281 A ASN 281 A VAL 6 A VAL 6 A PRO 8 A PRO 8 A GLU 2 A GLU 2 A HIS 3 A HIS 3 A ASN 275 A ASN 275 A ASN 281 A ASN 281 A THR 159 A THR 159 A PHE 163 A PHE 163 A VAL 154 A VAL 154 A ILE 156 A ILE 156 A TYR 15 A TYR 15 A ALA 17 A ALA 17 A LEU 29 A LEU 29 A THR 48 A THR 48 A ALA 119 A ALA 119 A MET 136 A MET 136 A LYS 176 A LYS 176 A VAL 179 A VAL 179 A VAL 184 A VAL 184 A ASN 186 A ASN 186 A THR 143 A THR 143 A TYR 147 A TYR 147 A ALA 119 A ALA 119 A MET 136 A MET 136 A LEU 29 A LEU 29 A THR 48 A THR 48 A ARG 267 A ARG 267 A MET 269 A MET 269 A GLN 260 A GLN 260 A LYS 262 A LYS 262 A TYR 51 A TYR 51 A VAL 54 A VAL 54 A THR 101 A THR 101 A ARG 110 A ARG 110 A TYR 59 A TYR 59 A LYS 61 A LYS 61 A TYR 51 A TYR 51 A VAL 54 A VAL 54 A THR 101 A THR 101 A ARG 110 A ARG 110 A GLN 77 A GLN 77 A THR 82 A THR 82 A ILE 203 A ILE 203 A GLN 204 A GLN 204 A TYR 214 A TYR 214 A ALA 215 A ALA 215 A LYS 220 A LYS 220 A LEU 221 A LEU 221 A TYR 233 A TYR 233 A THR 234 A THR 234 A ILE 296 A ILE 296 A THR 305 A THR 305 A GLY 314 A GLY 314 A THR 322 A THR 322 A VAL 352 A VAL 352 A THR 358 A THR 358 A ALA 337 A ALA 337 A LEU 339 A LEU 339 A GLY 326 A GLY 326 A CYS 328 A CYS 328 A ALA 344 A ALA 344 A VAL 346 A VAL 346 A HIS 331 A HIS 331 A SER 332 A SER 332 A SER 364 A SER 364 A LEU 369 A LEU 369 A ALA 372 A ALA 372 A SER 377 A SER 377 181 P 64 2 2