0.010192
0.005884
0.000000
0.000000
0.011769
0.000000
0.000000
0.000000
0.004930
0.00000
0.00000
0.00000
Nair, D.T.
Johnson, R.E.
Prakash, L.
Prakash, S.
Aggarwal, A.K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
98.114
98.114
202.823
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C9 H16 N3 O13 P3
467.157
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
non-polymer
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O6 P
291.198
n
2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
O
N
89
N
P
N
90
N
O
N
91
N
O
N
92
N
O
N
93
N
C
N
94
R
C
N
95
N
O
N
96
S
C
N
97
N
O
N
98
N
C
N
99
R
C
Y
100
N
N
Y
101
N
C
Y
102
N
N
Y
103
N
C
Y
104
N
C
N
105
N
N
Y
106
N
N
Y
107
N
C
Y
108
N
N
Y
109
N
C
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
O
N
125
N
P
N
126
N
O
N
127
N
O
N
128
N
O
N
129
N
C
N
130
R
C
N
131
N
O
N
132
S
C
N
133
N
O
N
134
N
C
N
135
R
C
N
136
N
N
N
137
N
C
N
138
N
O
N
139
N
N
N
140
N
C
N
141
N
N
N
142
N
C
N
143
N
C
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
N
C
N
160
N
N
N
161
N
C
N
162
N
C
N
163
N
C
N
164
N
O
N
165
N
N
N
166
R
C
N
167
N
C
N
168
S
C
N
169
R
C
N
170
N
O
N
171
N
O
N
172
N
C
N
173
N
O
N
174
R
P
N
175
N
O
N
176
N
O
N
177
N
O
N
178
S
P
N
179
N
O
N
180
N
O
N
181
N
O
N
182
N
P
N
183
N
O
N
184
N
O
N
185
N
O
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
O
N
203
N
P
N
204
N
O
N
205
N
O
N
206
N
O
N
207
N
C
N
208
R
C
N
209
N
O
N
210
S
C
N
211
N
O
N
212
N
C
N
213
R
C
Y
214
N
N
Y
215
N
C
Y
216
N
N
Y
217
N
C
N
218
N
C
N
219
N
O
N
220
N
N
N
221
N
C
N
222
N
N
N
223
N
N
Y
224
N
C
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
N
N
240
N
C
N
241
N
N
N
242
N
C
N
243
N
C
N
244
N
C
N
245
N
O
N
246
N
N
N
247
R
C
N
248
N
C
N
249
N
C
N
250
S
C
N
251
N
O
N
252
N
C
N
253
N
O
N
254
N
P
N
255
N
O
N
256
N
O
N
257
N
O
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
O
N
273
N
P
N
274
N
O
N
275
N
O
N
276
N
O
N
277
N
C
N
278
R
C
N
279
N
O
N
280
S
C
N
281
N
O
N
282
N
C
N
283
R
C
N
284
N
N
N
285
N
C
N
286
N
O
N
287
N
N
N
288
N
C
N
289
N
O
N
290
N
C
N
291
N
C
N
292
N
C
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
N
N
309
S
C
N
310
N
C
N
311
N
O
N
312
N
C
N
313
N
C
N
314
N
C
N
315
N
O
N
316
N
N
N
317
N
O
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
N
N
329
S
C
N
330
N
C
N
331
N
O
N
332
N
C
N
333
N
C
N
334
N
C
N
335
N
O
N
336
N
O
N
337
N
O
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
N
N
348
N
C
N
349
N
C
N
350
N
O
N
351
N
O
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
N
N
358
S
C
N
359
N
C
N
360
N
O
N
361
N
C
Y
362
N
C
Y
363
N
N
Y
364
N
C
Y
365
N
C
Y
366
N
N
N
367
N
O
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
O
N
379
N
H
N
380
N
H
N
381
N
N
N
382
S
C
N
383
N
C
N
384
N
O
N
385
S
C
N
386
N
C
N
387
N
C
N
388
N
C
N
389
N
O
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
N
N
404
S
C
N
405
N
C
N
406
N
O
N
407
N
C
N
408
N
C
N
409
N
C
N
410
N
C
N
411
N
O
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
N
N
426
S
C
N
427
N
C
N
428
N
O
N
429
N
C
N
430
N
C
N
431
N
C
N
432
N
C
N
433
N
N
N
434
N
O
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
N
N
451
S
C
N
452
N
C
N
453
N
O
N
454
N
C
N
455
N
C
N
456
N
S
N
457
N
C
N
458
N
O
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
MG
N
471
N
N
N
472
S
C
N
473
N
C
N
474
N
O
N
475
N
C
Y
476
N
C
Y
477
N
C
Y
478
N
C
Y
479
N
C
Y
480
N
C
Y
481
N
C
N
482
N
O
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
N
N
495
S
C
N
496
N
C
N
497
N
O
N
498
N
C
N
499
N
C
N
500
N
C
N
501
N
O
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
N
N
512
S
C
N
513
N
C
N
514
N
O
N
515
N
C
N
516
N
O
N
517
N
O
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
H
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
N
N
526
S
C
N
527
N
C
N
528
N
O
N
529
R
C
N
530
N
O
N
531
N
C
N
532
N
O
N
533
N
H
N
534
N
H
N
535
N
H
N
536
N
H
N
537
N
H
N
538
N
H
N
539
N
H
N
540
N
H
N
541
N
H
N
542
N
N
N
543
S
C
N
544
N
C
N
545
N
O
N
546
N
C
Y
547
N
C
Y
548
N
C
Y
549
N
C
Y
550
N
C
Y
551
N
C
Y
552
N
C
N
553
N
O
N
554
N
O
N
555
N
H
N
556
N
H
N
557
N
H
N
558
N
H
N
559
N
H
N
560
N
H
N
561
N
H
N
562
N
H
N
563
N
H
N
564
N
H
N
565
N
H
N
566
N
N
N
567
S
C
N
568
N
C
N
569
N
O
N
570
N
C
N
571
N
C
N
572
N
C
N
573
N
O
N
574
N
H
N
575
N
H
N
576
N
H
N
577
N
H
N
578
N
H
N
579
N
H
N
580
N
H
N
581
N
H
N
582
N
H
N
583
N
H
N
584
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
doub
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
doub
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
Y
224
N
sing
Y
225
N
sing
Y
226
N
doub
N
227
N
sing
Y
228
N
sing
N
229
N
sing
Y
230
N
doub
N
231
N
doub
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
doub
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
doub
N
246
N
sing
N
247
N
sing
N
248
N
doub
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
doub
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
doub
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
doub
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
doub
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
doub
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
Y
368
N
sing
Y
369
N
doub
Y
370
N
doub
N
371
N
sing
Y
372
N
sing
N
373
N
sing
Y
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
doub
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
doub
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
doub
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
doub
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
doub
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
Y
476
N
doub
Y
477
N
sing
Y
478
N
sing
N
479
N
sing
Y
480
N
doub
N
481
N
sing
Y
482
N
doub
N
483
N
sing
Y
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
doub
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
doub
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
doub
N
525
N
sing
N
526
N
sing
N
527
N
sing
N
528
N
sing
N
529
N
sing
N
530
N
sing
N
531
N
sing
N
532
N
sing
N
533
N
sing
N
534
N
sing
N
535
N
sing
N
536
N
sing
N
537
N
sing
N
538
N
sing
N
539
N
sing
N
540
N
doub
N
541
N
sing
N
542
N
sing
N
543
N
sing
N
544
N
sing
Y
545
N
doub
Y
546
N
sing
Y
547
N
sing
N
548
N
sing
Y
549
N
doub
N
550
N
sing
Y
551
N
doub
N
552
N
sing
Y
553
N
sing
N
554
N
sing
N
555
N
sing
N
556
N
sing
N
557
N
sing
N
558
N
sing
N
559
N
sing
N
560
N
sing
N
561
N
sing
N
562
N
sing
N
563
N
sing
N
564
N
doub
N
565
N
sing
N
566
N
sing
N
567
N
sing
N
568
N
sing
N
569
N
sing
N
570
N
sing
N
571
N
sing
N
572
N
sing
N
573
N
sing
N
574
N
sing
N
575
N
sing
UK
Structure
STRUE6
2005
0969-2126
13
1569
1577
10.1016/j.str.2005.08.010
16216587
Human DNA Polymerase iota Incorporates dCTP Opposite Template G via a G.C+ Hoogsteen Base Pair.
2005
10.2210/pdb2alz/pdb
pdb_00002alz
110.0
1
CCD
2004-10-01
ADSC QUANTUM 315
SINGLE WAVELENGTH
M
x-ray
1
1.072
1.0
X25
NSLS
1.072
SYNCHROTRON
NSLS BEAMLINE X25
DNA template
2762.808
5'-D(*TP*GP*GP*GP*GP*TP*CP*CP*T)-3'
1
syn
polymer
DNA primer
2091.414
5'-D(*AP*GP*GP*AP*CP*CP*(DOC))-3'
1
syn
polymer
44037.047
DNA polymerase iota
2.7.7.7
1
man
polymer
24.305
MAGNESIUM ION
2
syn
non-polymer
467.157
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
1
syn
non-polymer
18.015
water
79
nat
water
RAD30 homolog B, Eta2
E.C.2.7.7.7
no
no
(DT)(DG)(DG)(DG)(DG)(DT)(DC)(DC)(DT)
TGGGGTCCT
T
polydeoxyribonucleotide
no
yes
(DA)(DG)(DG)(DA)(DC)(DC)(DOC)
AGGACCC
P
polydeoxyribonucleotide
no
no
ASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGEDLTRYRE
MSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMR
EAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTF
SPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTVRL
IIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLK
ASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGEDLTRYRE
MSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMR
EAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTF
SPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTVRL
IIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
baker's yeast
Saccharomyces
sample
POLI, RAD30B
9606
Homo sapiens
4932
Saccharomyces cerevisiae
BJ5464
plasmid
pBJ941
1
2.70
54.20
6.50
16% PEG 5K MME, 0.4 M Ammonium Sulfate, 0.1 M MES
buffer, pH 6.5, hanging drop, pH 6.50
1.714
1
19
T
841
P
873
0.892
T_DG841:DOC873_P
1
-1.275
-0.143
-0.124
-0.080
-11.285
1
19
T
842
P
872
-0.910
T_DG842:DC872_P
2
-6.326
-0.047
-0.284
-0.216
-13.053
1
19
T
843
P
871
-2.162
T_DG843:DC871_P
3
-9.659
0.026
-0.600
-0.155
-11.856
1
20
T
844
P
870
-2.914
T_DT844:DA870_P
4
-5.877
-0.081
-0.171
-0.203
0.033
1
19
T
845
P
869
-0.810
T_DC845:DG869_P
5
-3.074
0.014
-0.036
-0.083
-4.237
1
19
T
846
P
868
2.124
T_DC846:DG868_P
6
-2.115
0.058
-0.116
0.003
-5.591
1
20
T
847
P
867
-4.158
T_DT847:DA867_P
7
-5.930
0.007
0.266
-0.247
3.603
26.140
T
T
841
842
8.338
P
P
873
872
3.793
3.755
0.533
-1.281
TT_DG841DG842:DC872DOC873_PP
1
1.970
-4.375
25.800
-3.994
-0.568
2.670
32.307
T
T
842
843
22.788
P
P
872
871
3.443
12.331
0.538
-1.509
TT_DG842DG843:DC871DC872_PP
2
4.509
-8.332
29.584
-4.849
-0.184
3.063
32.174
T
T
843
844
10.502
P
P
871
870
3.261
5.789
-0.589
-0.959
TT_DG843DT844:DA870DC871_PP
3
-1.324
2.403
31.635
-2.740
0.831
3.045
30.868
T
T
844
845
5.497
P
P
870
869
3.095
2.922
0.008
-0.394
TT_DT844DC845:DG869DA870_PP
4
-0.062
0.117
30.732
-1.274
-0.026
3.451
36.607
T
T
845
846
1.421
P
P
869
868
3.471
0.892
-0.077
-0.736
TT_DC845DC846:DG868DG869_PP
5
0.603
-0.960
36.592
-1.301
0.211
3.374
29.022
T
T
846
847
5.608
P
P
868
867
3.366
2.800
-0.771
-0.458
TT_DC846DT847:DA867DG868_PP
6
-3.400
6.809
28.693
-1.552
0.763
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_conn_type
struct_site
repository
Initial release
Version format compliance
Advisory
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2005-10-25
1
1
2008-04-30
1
2
2011-07-13
1
3
2023-08-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn_type.id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2005-08-08
REL
REL
MG
MAGNESIUM ION
DCP
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
HOH
water
1T3N
PDB ENTRY 1T3N
PDB
experimental model
MG
872
4
MG
MG
872
A
MG
871
4
MG
MG
871
A
DCP
875
5
DCP
DCP
875
A
HOH
903
6
HOH
HOH
903
T
HOH
930
6
HOH
HOH
930
T
HOH
968
6
HOH
HOH
968
T
HOH
974
6
HOH
HOH
974
T
HOH
993
6
HOH
HOH
993
T
HOH
945
6
HOH
HOH
945
P
HOH
950
6
HOH
HOH
950
P
HOH
976
6
HOH
HOH
976
P
HOH
1014
6
HOH
HOH
1014
P
HOH
902
6
HOH
HOH
902
A
HOH
905
6
HOH
HOH
905
A
HOH
906
6
HOH
HOH
906
A
HOH
907
6
HOH
HOH
907
A
HOH
908
6
HOH
HOH
908
A
HOH
909
6
HOH
HOH
909
A
HOH
910
6
HOH
HOH
910
A
HOH
911
6
HOH
HOH
911
A
HOH
912
6
HOH
HOH
912
A
HOH
913
6
HOH
HOH
913
A
HOH
914
6
HOH
HOH
914
A
HOH
915
6
HOH
HOH
915
A
HOH
916
6
HOH
HOH
916
A
HOH
917
6
HOH
HOH
917
A
HOH
919
6
HOH
HOH
919
A
HOH
920
6
HOH
HOH
920
A
HOH
921
6
HOH
HOH
921
A
HOH
922
6
HOH
HOH
922
A
HOH
923
6
HOH
HOH
923
A
HOH
924
6
HOH
HOH
924
A
HOH
925
6
HOH
HOH
925
A
HOH
926
6
HOH
HOH
926
A
HOH
928
6
HOH
HOH
928
A
HOH
929
6
HOH
HOH
929
A
HOH
933
6
HOH
HOH
933
A
HOH
935
6
HOH
HOH
935
A
HOH
937
6
HOH
HOH
937
A
HOH
938
6
HOH
HOH
938
A
HOH
939
6
HOH
HOH
939
A
HOH
940
6
HOH
HOH
940
A
HOH
943
6
HOH
HOH
943
A
HOH
944
6
HOH
HOH
944
A
HOH
946
6
HOH
HOH
946
A
HOH
949
6
HOH
HOH
949
A
HOH
954
6
HOH
HOH
954
A
HOH
956
6
HOH
HOH
956
A
HOH
959
6
HOH
HOH
959
A
HOH
960
6
HOH
HOH
960
A
HOH
961
6
HOH
HOH
961
A
HOH
962
6
HOH
HOH
962
A
HOH
967
6
HOH
HOH
967
A
HOH
970
6
HOH
HOH
970
A
HOH
972
6
HOH
HOH
972
A
HOH
973
6
HOH
HOH
973
A
HOH
975
6
HOH
HOH
975
A
HOH
977
6
HOH
HOH
977
A
HOH
978
6
HOH
HOH
978
A
HOH
979
6
HOH
HOH
979
A
HOH
982
6
HOH
HOH
982
A
HOH
983
6
HOH
HOH
983
A
HOH
984
6
HOH
HOH
984
A
HOH
986
6
HOH
HOH
986
A
HOH
987
6
HOH
HOH
987
A
HOH
988
6
HOH
HOH
988
A
HOH
989
6
HOH
HOH
989
A
HOH
995
6
HOH
HOH
995
A
HOH
998
6
HOH
HOH
998
A
HOH
999
6
HOH
HOH
999
A
HOH
1001
6
HOH
HOH
1001
A
HOH
1003
6
HOH
HOH
1003
A
HOH
1006
6
HOH
HOH
1006
A
HOH
1007
6
HOH
HOH
1007
A
HOH
1009
6
HOH
HOH
1009
A
HOH
1011
6
HOH
HOH
1011
A
HOH
1012
6
HOH
HOH
1012
A
HOH
1013
6
HOH
HOH
1013
A
HOH
1015
6
HOH
HOH
1015
A
HOH
1016
6
HOH
HOH
1016
A
HOH
1017
6
HOH
HOH
1017
A
HOH
1018
6
HOH
HOH
1018
A
T
839
n
1
DT
839
T
G
840
n
2
DG
840
T
G
841
n
3
DG
841
T
G
842
n
4
DG
842
T
G
843
n
5
DG
843
T
T
844
n
6
DT
844
T
C
845
n
7
DC
845
T
C
846
n
8
DC
846
T
T
847
n
9
DT
847
T
A
867
n
1
DA
867
P
G
868
n
2
DG
868
P
G
869
n
3
DG
869
P
A
870
n
4
DA
870
P
C
871
n
5
DC
871
P
C
872
n
6
DC
872
P
DOC
873
n
7
DOC
873
P
ALA
25
n
1
ALA
25
A
SER
26
n
2
SER
26
A
SER
27
n
3
SER
27
A
ARG
28
n
4
ARG
28
A
VAL
29
n
5
VAL
29
A
ILE
30
n
6
ILE
30
A
VAL
31
n
7
VAL
31
A
HIS
32
n
8
HIS
32
A
VAL
33
n
9
VAL
33
A
ASP
34
n
10
ASP
34
A
LEU
35
n
11
LEU
35
A
ASP
36
n
12
ASP
36
A
CYS
37
n
13
CYS
37
A
PHE
38
n
14
PHE
38
A
TYR
39
n
15
TYR
39
A
ALA
40
n
16
ALA
40
A
GLN
41
n
17
GLN
41
A
VAL
42
n
18
VAL
42
A
GLU
43
n
19
GLU
43
A
MET
44
n
20
MET
44
A
ILE
45
n
21
ILE
45
A
SER
46
n
22
SER
46
A
ASN
47
n
23
ASN
47
A
PRO
48
n
24
PRO
48
A
GLU
49
n
25
GLU
49
A
LEU
50
n
26
LEU
50
A
LYS
51
n
27
LYS
51
A
ASP
52
n
28
ASP
52
A
LYS
53
n
29
LYS
53
A
PRO
54
n
30
PRO
54
A
LEU
55
n
31
LEU
55
A
GLY
56
n
32
GLY
56
A
VAL
57
n
33
VAL
57
A
GLN
58
n
34
GLN
58
A
GLN
59
n
35
GLN
59
A
LYS
60
n
36
LYS
60
A
TYR
61
n
37
TYR
61
A
LEU
62
n
38
LEU
62
A
VAL
63
n
39
VAL
63
A
VAL
64
n
40
VAL
64
A
THR
65
n
41
THR
65
A
CYS
66
n
42
CYS
66
A
ASN
67
n
43
ASN
67
A
TYR
68
n
44
TYR
68
A
GLU
69
n
45
GLU
69
A
ALA
70
n
46
ALA
70
A
ARG
71
n
47
ARG
71
A
LYS
72
n
48
LYS
72
A
LEU
73
n
49
LEU
73
A
GLY
74
n
50
GLY
74
A
VAL
75
n
51
VAL
75
A
LYS
76
n
52
LYS
76
A
LYS
77
n
53
LYS
77
A
LEU
78
n
54
LEU
78
A
MET
79
n
55
MET
79
A
ASN
80
n
56
ASN
80
A
VAL
81
n
57
VAL
81
A
ARG
82
n
58
ARG
82
A
ASP
83
n
59
ASP
83
A
ALA
84
n
60
ALA
84
A
LYS
85
n
61
LYS
85
A
GLU
86
n
62
GLU
86
A
LYS
87
n
63
LYS
87
A
CYS
88
n
64
CYS
88
A
PRO
89
n
65
PRO
89
A
GLN
90
n
66
GLN
90
A
LEU
91
n
67
LEU
91
A
VAL
92
n
68
VAL
92
A
LEU
93
n
69
LEU
93
A
VAL
94
n
70
VAL
94
A
ASN
95
n
71
ASN
95
A
GLY
96
n
72
GLY
96
A
GLU
97
n
73
GLU
97
A
ASP
98
n
74
ASP
98
A
LEU
99
n
75
LEU
99
A
THR
100
n
76
THR
100
A
ARG
101
n
77
ARG
101
A
TYR
102
n
78
TYR
102
A
ARG
103
n
79
ARG
103
A
GLU
104
n
80
GLU
104
A
MET
105
n
81
MET
105
A
SER
106
n
82
SER
106
A
TYR
107
n
83
TYR
107
A
LYS
108
n
84
LYS
108
A
VAL
109
n
85
VAL
109
A
THR
110
n
86
THR
110
A
GLU
111
n
87
GLU
111
A
LEU
112
n
88
LEU
112
A
LEU
113
n
89
LEU
113
A
GLU
114
n
90
GLU
114
A
GLU
115
n
91
GLU
115
A
PHE
116
n
92
PHE
116
A
SER
117
n
93
SER
117
A
PRO
118
n
94
PRO
118
A
VAL
119
n
95
VAL
119
A
VAL
120
n
96
VAL
120
A
GLU
121
n
97
GLU
121
A
ARG
122
n
98
ARG
122
A
LEU
123
n
99
LEU
123
A
GLY
124
n
100
GLY
124
A
PHE
125
n
101
PHE
125
A
ASP
126
n
102
ASP
126
A
GLU
127
n
103
GLU
127
A
ASN
128
n
104
ASN
128
A
PHE
129
n
105
PHE
129
A
VAL
130
n
106
VAL
130
A
ASP
131
n
107
ASP
131
A
LEU
132
n
108
LEU
132
A
THR
133
n
109
THR
133
A
GLU
134
n
110
GLU
134
A
MET
135
n
111
MET
135
A
VAL
136
n
112
VAL
136
A
GLU
137
n
113
GLU
137
A
LYS
138
n
114
LYS
138
A
ARG
139
n
115
ARG
139
A
LEU
140
n
116
LEU
140
A
GLN
141
n
117
GLN
141
A
GLN
142
n
118
GLN
142
A
LEU
143
n
119
LEU
143
A
GLN
144
n
120
GLN
144
A
SER
145
n
121
SER
145
A
ASP
146
n
122
ASP
146
A
GLU
147
n
123
GLU
147
A
LEU
148
n
124
LEU
148
A
SER
149
n
125
SER
149
A
ALA
150
n
126
ALA
150
A
VAL
151
n
127
VAL
151
A
THR
152
n
128
THR
152
A
VAL
153
n
129
VAL
153
A
SER
154
n
130
SER
154
A
GLY
155
n
131
GLY
155
A
HIS
156
n
132
HIS
156
A
VAL
157
n
133
VAL
157
A
TYR
158
n
134
TYR
158
A
ASN
159
n
135
ASN
159
A
ASN
160
n
136
ASN
160
A
GLN
161
n
137
GLN
161
A
SER
162
n
138
SER
162
A
ILE
163
n
139
ILE
163
A
ASN
164
n
140
ASN
164
A
LEU
165
n
141
LEU
165
A
LEU
166
n
142
LEU
166
A
ASP
167
n
143
ASP
167
A
VAL
168
n
144
VAL
168
A
LEU
169
n
145
LEU
169
A
HIS
170
n
146
HIS
170
A
ILE
171
n
147
ILE
171
A
ARG
172
n
148
ARG
172
A
LEU
173
n
149
LEU
173
A
LEU
174
n
150
LEU
174
A
VAL
175
n
151
VAL
175
A
GLY
176
n
152
GLY
176
A
SER
177
n
153
SER
177
A
GLN
178
n
154
GLN
178
A
ILE
179
n
155
ILE
179
A
ALA
180
n
156
ALA
180
A
ALA
181
n
157
ALA
181
A
GLU
182
n
158
GLU
182
A
MET
183
n
159
MET
183
A
ARG
184
n
160
ARG
184
A
GLU
185
n
161
GLU
185
A
ALA
186
n
162
ALA
186
A
MET
187
n
163
MET
187
A
TYR
188
n
164
TYR
188
A
ASN
189
n
165
ASN
189
A
GLN
190
n
166
GLN
190
A
LEU
191
n
167
LEU
191
A
GLY
192
n
168
GLY
192
A
LEU
193
n
169
LEU
193
A
THR
194
n
170
THR
194
A
GLY
195
n
171
GLY
195
A
CYS
196
n
172
CYS
196
A
ALA
197
n
173
ALA
197
A
GLY
198
n
174
GLY
198
A
VAL
199
n
175
VAL
199
A
ALA
200
n
176
ALA
200
A
SER
201
n
177
SER
201
A
ASN
202
n
178
ASN
202
A
LYS
203
n
179
LYS
203
A
LEU
204
n
180
LEU
204
A
LEU
205
n
181
LEU
205
A
ALA
206
n
182
ALA
206
A
LYS
207
n
183
LYS
207
A
LEU
208
n
184
LEU
208
A
VAL
209
n
185
VAL
209
A
SER
210
n
186
SER
210
A
GLY
211
n
187
GLY
211
A
VAL
212
n
188
VAL
212
A
PHE
213
n
189
PHE
213
A
LYS
214
n
190
LYS
214
A
PRO
215
n
191
PRO
215
A
ASN
216
n
192
ASN
216
A
GLN
217
n
193
GLN
217
A
GLN
218
n
194
GLN
218
A
THR
219
n
195
THR
219
A
VAL
220
n
196
VAL
220
A
LEU
221
n
197
LEU
221
A
LEU
222
n
198
LEU
222
A
PRO
223
n
199
PRO
223
A
GLU
224
n
200
GLU
224
A
SER
225
n
201
SER
225
A
CYS
226
n
202
CYS
226
A
GLN
227
n
203
GLN
227
A
HIS
228
n
204
HIS
228
A
LEU
229
n
205
LEU
229
A
ILE
230
n
206
ILE
230
A
HIS
231
n
207
HIS
231
A
SER
232
n
208
SER
232
A
LEU
233
n
209
LEU
233
A
ASN
234
n
210
ASN
234
A
HIS
235
n
211
HIS
235
A
ILE
236
n
212
ILE
236
A
LYS
237
n
213
LYS
237
A
GLU
238
n
214
GLU
238
A
ILE
239
n
215
ILE
239
A
PRO
240
n
216
PRO
240
A
GLY
241
n
217
GLY
241
A
ILE
242
n
218
ILE
242
A
GLY
243
n
219
GLY
243
A
TYR
244
n
220
TYR
244
A
LYS
245
n
221
LYS
245
A
THR
246
n
222
THR
246
A
ALA
247
n
223
ALA
247
A
LYS
248
n
224
LYS
248
A
CYS
249
n
225
CYS
249
A
LEU
250
n
226
LEU
250
A
GLU
251
n
227
GLU
251
A
ALA
252
n
228
ALA
252
A
LEU
253
n
229
LEU
253
A
GLY
254
n
230
GLY
254
A
ILE
255
n
231
ILE
255
A
ASN
256
n
232
ASN
256
A
SER
257
n
233
SER
257
A
VAL
258
n
234
VAL
258
A
ARG
259
n
235
ARG
259
A
ASP
260
n
236
ASP
260
A
LEU
261
n
237
LEU
261
A
GLN
262
n
238
GLN
262
A
THR
263
n
239
THR
263
A
PHE
264
n
240
PHE
264
A
SER
265
n
241
SER
265
A
PRO
266
n
242
PRO
266
A
LYS
267
n
243
LYS
267
A
ILE
268
n
244
ILE
268
A
LEU
269
n
245
LEU
269
A
GLU
270
n
246
GLU
270
A
LYS
271
n
247
LYS
271
A
GLU
272
n
248
GLU
272
A
LEU
273
n
249
LEU
273
A
GLY
274
n
250
GLY
274
A
ILE
275
n
251
ILE
275
A
SER
276
n
252
SER
276
A
VAL
277
n
253
VAL
277
A
ALA
278
n
254
ALA
278
A
GLN
279
n
255
GLN
279
A
ARG
280
n
256
ARG
280
A
ILE
281
n
257
ILE
281
A
GLN
282
n
258
GLN
282
A
LYS
283
n
259
LYS
283
A
LEU
284
n
260
LEU
284
A
SER
285
n
261
SER
285
A
PHE
286
n
262
PHE
286
A
GLY
287
n
263
GLY
287
A
GLU
288
n
264
GLU
288
A
ASP
289
n
265
ASP
289
A
ASN
290
n
266
ASN
290
A
SER
291
n
267
SER
291
A
PRO
292
n
268
PRO
292
A
VAL
293
n
269
VAL
293
A
ILE
294
n
270
ILE
294
A
LEU
295
n
271
LEU
295
A
SER
296
n
272
SER
296
A
GLY
297
n
273
GLY
297
A
PRO
298
n
274
PRO
298
A
PRO
299
n
275
PRO
299
A
GLN
300
n
276
GLN
300
A
SER
301
n
277
SER
301
A
PHE
302
n
278
PHE
302
A
SER
303
n
279
SER
303
A
GLU
304
n
280
GLU
304
A
GLU
305
n
281
GLU
305
A
ASP
306
n
282
ASP
306
A
SER
307
n
283
SER
307
A
PHE
308
n
284
PHE
308
A
LYS
309
n
285
LYS
309
A
LYS
310
n
286
LYS
310
A
CYS
311
n
287
CYS
311
A
SER
312
n
288
SER
312
A
SER
313
n
289
SER
313
A
GLU
314
n
290
GLU
314
A
VAL
315
n
291
VAL
315
A
GLU
316
n
292
GLU
316
A
ALA
317
n
293
ALA
317
A
LYS
318
n
294
LYS
318
A
ASN
319
n
295
ASN
319
A
LYS
320
n
296
LYS
320
A
ILE
321
n
297
ILE
321
A
GLU
322
n
298
GLU
322
A
GLU
323
n
299
GLU
323
A
LEU
324
n
300
LEU
324
A
LEU
325
n
301
LEU
325
A
ALA
326
n
302
ALA
326
A
SER
327
n
303
SER
327
A
LEU
328
n
304
LEU
328
A
LEU
329
n
305
LEU
329
A
ASN
330
n
306
ASN
330
A
ARG
331
n
307
ARG
331
A
VAL
332
n
308
VAL
332
A
CYS
333
n
309
CYS
333
A
GLN
334
n
310
GLN
334
A
ASP
335
n
311
ASP
335
A
GLY
336
n
312
GLY
336
A
ARG
337
n
313
ARG
337
A
LYS
338
n
314
LYS
338
A
PRO
339
n
315
PRO
339
A
HIS
340
n
316
HIS
340
A
THR
341
n
317
THR
341
A
VAL
342
n
318
VAL
342
A
ARG
343
n
319
ARG
343
A
LEU
344
n
320
LEU
344
A
ILE
345
n
321
ILE
345
A
ILE
346
n
322
ILE
346
A
ARG
347
n
323
ARG
347
A
ARG
348
n
324
ARG
348
A
TYR
349
n
325
TYR
349
A
SER
350
n
326
SER
350
A
SER
351
n
327
SER
351
A
GLU
352
n
328
GLU
352
A
LYS
353
n
329
LYS
353
A
HIS
354
n
330
HIS
354
A
TYR
355
n
331
TYR
355
A
GLY
356
n
332
GLY
356
A
ARG
357
n
333
ARG
357
A
GLU
358
n
334
GLU
358
A
SER
359
n
335
SER
359
A
ARG
360
n
336
ARG
360
A
GLN
361
n
337
GLN
361
A
CYS
362
n
338
CYS
362
A
PRO
363
n
339
PRO
363
A
ILE
364
n
340
ILE
364
A
PRO
365
n
341
PRO
365
A
SER
366
n
342
SER
366
A
HIS
367
n
343
HIS
367
A
VAL
368
n
344
VAL
368
A
ILE
369
n
345
ILE
369
A
GLN
370
n
346
GLN
370
A
n
347
371
A
n
348
372
A
n
349
373
A
n
350
374
A
n
351
375
A
n
352
376
A
n
353
377
A
n
354
378
A
VAL
379
n
355
VAL
379
A
MET
380
n
356
MET
380
A
THR
381
n
357
THR
381
A
PRO
382
n
358
PRO
382
A
MET
383
n
359
MET
383
A
VAL
384
n
360
VAL
384
A
ASP
385
n
361
ASP
385
A
ILE
386
n
362
ILE
386
A
LEU
387
n
363
LEU
387
A
MET
388
n
364
MET
388
A
LYS
389
n
365
LYS
389
A
LEU
390
n
366
LEU
390
A
PHE
391
n
367
PHE
391
A
ARG
392
n
368
ARG
392
A
ASN
393
n
369
ASN
393
A
MET
394
n
370
MET
394
A
n
371
395
A
n
372
396
A
n
373
397
A
n
374
398
A
n
375
399
A
n
376
400
A
n
377
401
A
n
378
402
A
n
379
403
A
THR
404
n
380
THR
404
A
LEU
405
n
381
LEU
405
A
LEU
406
n
382
LEU
406
A
SER
407
n
383
SER
407
A
VAL
408
n
384
VAL
408
A
CYS
409
n
385
CYS
409
A
PHE
410
n
386
PHE
410
A
CYS
411
n
387
CYS
411
A
ASN
412
n
388
ASN
412
A
LEU
413
n
389
LEU
413
A
LYS
414
n
390
LYS
414
A
0.3588
0.1203
0.2540
0.7846
0.4018
1.9011
0.0647
0.0336
0.0059
-0.0206
-0.1188
0.0138
0.0705
0.2142
0.0541
0.3898
0.0179
-0.0122
0.3830
-0.0092
0.3096
refined
16.3438
16.5375
6.0781
X-RAY DIFFRACTION
2.8093
-1.2040
-0.8828
2.9484
0.4688
6.0581
0.0788
0.0137
-0.3578
0.3055
-0.3291
0.6859
0.2718
-0.2846
0.2503
0.3131
-0.1281
0.1040
0.3429
-0.1294
0.4542
refined
-4.9600
16.1357
23.6401
X-RAY DIFFRACTION
2.9279
-0.9832
2.7703
2.9952
0.3580
4.0367
-0.4652
-0.0778
0.6493
-0.1231
-0.1596
-0.0863
-0.3962
-0.1495
0.6248
0.3795
0.0245
-0.1688
0.2717
-0.0415
0.4888
refined
0.4889
35.4704
-3.2889
X-RAY DIFFRACTION
6.9815
1.2328
-1.8301
8.4853
0.1166
3.7757
1.0479
-0.3472
0.6124
1.3248
-0.6834
0.9378
-0.1738
0.2586
-0.3645
0.6301
-0.2922
0.2805
0.2298
-0.2637
0.3142
refined
7.2756
41.0709
32.8688
X-RAY DIFFRACTION
1.4275
-0.6439
-0.4337
2.1999
-0.3448
0.5682
0.0301
-0.0049
0.4890
0.0384
-0.0755
0.5017
-0.1463
0.1403
0.0454
0.4032
-0.0784
0.0173
0.3192
-0.0711
0.5119
refined
4.5685
36.7789
17.2676
X-RAY DIFFRACTION
A
26
C
2
A
37
C
13
X-RAY DIFFRACTION
1
A
99
C
75
A
224
C
200
X-RAY DIFFRACTION
1
A
38
C
14
A
98
C
74
X-RAY DIFFRACTION
2
A
225
C
201
A
287
C
263
X-RAY DIFFRACTION
3
A
298
C
274
A
414
C
390
X-RAY DIFFRACTION
4
T
839
A
1
T
847
A
9
X-RAY DIFFRACTION
5
P
867
B
1
P
873
B
7
X-RAY DIFFRACTION
5
A
875
F
1
A
875
F
1
X-RAY DIFFRACTION
5
A
871
E
1
A
872
D
1
X-RAY DIFFRACTION
5
author_defined_assembly
6
hexameric
A
ASP
34
C
OD2
ASP
10
1_555
A
MG
871
E
MG
MG
1_555
A
LEU
35
C
O
LEU
11
1_555
88.3
A
ASP
34
C
OD2
ASP
10
1_555
A
MG
871
E
MG
MG
1_555
A
ASP
126
C
OD1
ASP
102
1_555
89.6
A
LEU
35
C
O
LEU
11
1_555
A
MG
871
E
MG
MG
1_555
A
ASP
126
C
OD1
ASP
102
1_555
86.8
A
ASP
34
C
OD2
ASP
10
1_555
A
MG
871
E
MG
MG
1_555
A
DCP
875
F
O1G
DCP
1_555
95.1
A
LEU
35
C
O
LEU
11
1_555
A
MG
871
E
MG
MG
1_555
A
DCP
875
F
O1G
DCP
1_555
95.1
A
ASP
126
C
OD1
ASP
102
1_555
A
MG
871
E
MG
MG
1_555
A
DCP
875
F
O1G
DCP
1_555
175.0
A
ASP
34
C
OD2
ASP
10
1_555
A
MG
871
E
MG
MG
1_555
A
DCP
875
F
O1A
DCP
1_555
110.2
A
LEU
35
C
O
LEU
11
1_555
A
MG
871
E
MG
MG
1_555
A
DCP
875
F
O1A
DCP
1_555
160.3
A
ASP
126
C
OD1
ASP
102
1_555
A
MG
871
E
MG
MG
1_555
A
DCP
875
F
O1A
DCP
1_555
86.6
A
DCP
875
F
O1G
DCP
1_555
A
MG
871
E
MG
MG
1_555
A
DCP
875
F
O1A
DCP
1_555
90.0
A
ASP
34
C
OD2
ASP
10
1_555
A
MG
871
E
MG
MG
1_555
A
DCP
875
F
O2B
DCP
1_555
176.2
A
LEU
35
C
O
LEU
11
1_555
A
MG
871
E
MG
MG
1_555
A
DCP
875
F
O2B
DCP
1_555
88.3
A
ASP
126
C
OD1
ASP
102
1_555
A
MG
871
E
MG
MG
1_555
A
DCP
875
F
O2B
DCP
1_555
88.7
A
DCP
875
F
O1G
DCP
1_555
A
MG
871
E
MG
MG
1_555
A
DCP
875
F
O2B
DCP
1_555
86.7
A
DCP
875
F
O1A
DCP
1_555
A
MG
871
E
MG
MG
1_555
A
DCP
875
F
O2B
DCP
1_555
73.0
A
ASP
34
C
OD1
ASP
10
1_555
A
MG
872
D
MG
MG
1_555
A
ASP
126
C
OD2
ASP
102
1_555
115.2
A
ASP
34
C
OD1
ASP
10
1_555
A
MG
872
D
MG
MG
1_555
A
GLU
127
C
OE2
GLU
103
1_555
88.7
A
ASP
126
C
OD2
ASP
102
1_555
A
MG
872
D
MG
MG
1_555
A
GLU
127
C
OE2
GLU
103
1_555
98.1
A
ASP
34
C
OD1
ASP
10
1_555
A
MG
872
D
MG
MG
1_555
A
DCP
875
F
O1A
DCP
1_555
112.7
A
ASP
126
C
OD2
ASP
102
1_555
A
MG
872
D
MG
MG
1_555
A
DCP
875
F
O1A
DCP
1_555
73.0
A
GLU
127
C
OE2
GLU
103
1_555
A
MG
872
D
MG
MG
1_555
A
DCP
875
F
O1A
DCP
1_555
158.6
P
DOC
873
2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE
B
DOC
7
DC
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.5000000000
-0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
10_665
-y+1,-x+1,-z+1/6
crystal symmetry operation
49.0570000000
84.9692164669
33.8038333333
A
N
GLU
121
C
N
GLU
97
A
O
PHE
129
C
O
PHE
105
A
O
ASN
128
C
O
ASN
104
A
N
VAL
33
C
N
VAL
9
A
N
ASP
34
C
N
ASP
10
A
O
CYS
196
C
O
CYS
172
A
N
VAL
199
C
N
VAL
175
A
O
THR
219
C
O
THR
195
A
O
GLN
218
C
O
GLN
194
A
N
HIS
156
C
N
HIS
132
A
O
MET
79
C
O
MET
55
A
N
VAL
63
C
N
VAL
39
A
O
THR
65
C
O
THR
41
A
N
VAL
57
C
N
VAL
33
A
N
GLY
56
C
N
GLY
32
A
O
VAL
92
C
O
VAL
68
A
N
PHE
302
C
N
PHE
278
A
O
PHE
410
C
O
PHE
386
A
O
CYS
409
C
O
CYS
385
A
N
ARG
343
C
N
ARG
319
A
N
ILE
346
C
N
ILE
322
A
O
GLU
358
C
O
GLU
334
1
A
CG
ASP
146
C
CG
ASP
122
1
Y
1
A
OD1
ASP
146
C
OD1
ASP
122
1
Y
1
A
OD2
ASP
146
C
OD2
ASP
122
1
Y
1
A
CG
LYS
245
C
CG
LYS
221
1
Y
1
A
CD
LYS
245
C
CD
LYS
221
1
Y
1
A
CE
LYS
245
C
CE
LYS
221
1
Y
1
A
NZ
LYS
245
C
NZ
LYS
221
1
Y
1
A
CG
LYS
271
C
CG
LYS
247
1
Y
1
A
CD
LYS
271
C
CD
LYS
247
1
Y
1
A
CE
LYS
271
C
CE
LYS
247
1
Y
1
A
NZ
LYS
271
C
NZ
LYS
247
1
Y
1
A
CG1
VAL
315
C
CG1
VAL
291
1
Y
1
A
CG2
VAL
315
C
CG2
VAL
291
1
Y
1
A
CG
GLU
316
C
CG
GLU
292
1
Y
1
A
CD
GLU
316
C
CD
GLU
292
1
Y
1
A
OE1
GLU
316
C
OE1
GLU
292
1
Y
1
A
OE2
GLU
316
C
OE2
GLU
292
1
Y
1
A
CG
LYS
338
C
CG
LYS
314
1
Y
1
A
CD
LYS
338
C
CD
LYS
314
1
Y
1
A
CE
LYS
338
C
CE
LYS
314
1
Y
1
A
NZ
LYS
338
C
NZ
LYS
314
1
Y
1
A
CG
TYR
349
C
CG
TYR
325
1
Y
1
A
CD1
TYR
349
C
CD1
TYR
325
1
Y
1
A
CD2
TYR
349
C
CD2
TYR
325
1
Y
1
A
CE1
TYR
349
C
CE1
TYR
325
1
Y
1
A
CE2
TYR
349
C
CE2
TYR
325
1
Y
1
A
CZ
TYR
349
C
CZ
TYR
325
1
Y
1
A
OH
TYR
349
C
OH
TYR
325
1
Y
1
A
OG
SER
350
C
OG
SER
326
1
Y
1
A
OG
SER
351
C
OG
SER
327
1
Y
1
A
CG
GLU
352
C
CG
GLU
328
1
Y
1
A
CD
GLU
352
C
CD
GLU
328
1
Y
1
A
OE1
GLU
352
C
OE1
GLU
328
1
Y
1
A
OE2
GLU
352
C
OE2
GLU
328
1
Y
1
A
CG
LYS
353
C
CG
LYS
329
1
Y
1
A
CD
LYS
353
C
CD
LYS
329
1
Y
1
A
CE
LYS
353
C
CE
LYS
329
1
Y
1
A
NZ
LYS
353
C
NZ
LYS
329
1
Y
1
A
CG
HIS
354
C
CG
HIS
330
1
Y
1
A
ND1
HIS
354
C
ND1
HIS
330
1
Y
1
A
CD2
HIS
354
C
CD2
HIS
330
1
Y
1
A
CE1
HIS
354
C
CE1
HIS
330
1
Y
1
A
NE2
HIS
354
C
NE2
HIS
330
1
Y
1
A
CG
TYR
355
C
CG
TYR
331
1
Y
1
A
CD1
TYR
355
C
CD1
TYR
331
1
Y
1
A
CD2
TYR
355
C
CD2
TYR
331
1
Y
1
A
CE1
TYR
355
C
CE1
TYR
331
1
Y
1
A
CE2
TYR
355
C
CE2
TYR
331
1
Y
1
A
CZ
TYR
355
C
CZ
TYR
331
1
Y
1
A
OH
TYR
355
C
OH
TYR
331
1
Y
1
A
CG
HIS
367
C
CG
HIS
343
1
Y
1
A
ND1
HIS
367
C
ND1
HIS
343
1
Y
1
A
CD2
HIS
367
C
CD2
HIS
343
1
Y
1
A
CE1
HIS
367
C
CE1
HIS
343
1
Y
1
A
NE2
HIS
367
C
NE2
HIS
343
1
Y
1
A
CG1
VAL
379
C
CG1
VAL
355
1
Y
1
A
CG2
VAL
379
C
CG2
VAL
355
1
Y
1
A
CG
ASP
385
C
CG
ASP
361
1
Y
1
A
OD1
ASP
385
C
OD1
ASP
361
1
Y
1
A
OD2
ASP
385
C
OD2
ASP
361
1
Y
1
A
CG1
ILE
386
C
CG1
ILE
362
1
Y
1
A
CG2
ILE
386
C
CG2
ILE
362
1
Y
1
A
CD1
ILE
386
C
CD1
ILE
362
1
Y
1
A
CG
LYS
389
C
CG
LYS
365
1
Y
1
A
CD
LYS
389
C
CD
LYS
365
1
Y
1
A
CE
LYS
389
C
CE
LYS
365
1
Y
1
A
NZ
LYS
389
C
NZ
LYS
365
1
Y
1
A
CG
LEU
405
C
CG
LEU
381
1
Y
1
A
CD1
LEU
405
C
CD1
LEU
381
1
Y
1
A
CD2
LEU
405
C
CD2
LEU
381
1
Y
1
A
LYS
371
C
LYS
347
1
Y
1
A
LEU
372
C
LEU
348
1
Y
1
A
GLY
373
C
GLY
349
1
Y
1
A
THR
374
C
THR
350
1
Y
1
A
GLY
375
C
GLY
351
1
Y
1
A
ASN
376
C
ASN
352
1
Y
1
A
TYR
377
C
TYR
353
1
Y
1
A
ASP
378
C
ASP
354
1
Y
1
A
VAL
395
C
VAL
371
1
Y
1
A
ASN
396
C
ASN
372
1
Y
1
A
VAL
397
C
VAL
373
1
Y
1
A
LYS
398
C
LYS
374
1
Y
1
A
MET
399
C
MET
375
1
Y
1
A
PRO
400
C
PRO
376
1
Y
1
A
PHE
401
C
PHE
377
1
Y
1
A
HIS
402
C
HIS
378
1
Y
1
A
LEU
403
C
LEU
379
1
Y
1
A
A
OD2
NH1
ASP
ARG
335
337
2.12
1
A
A
ND2
O
ASN
HOH
290
902
2.15
1
T
A
OP2
OG
DT
SER
844
301
2.19
1
A
A
PHE
LYS
213
214
-147.88
1
A
A
HIS
TYR
354
355
-149.94
1
P
DC
871
0.070
SIDE CHAIN
1
-4.99
0.40
104.50
99.51
T
T
T
O4'
C4'
C3'
DT
DT
DT
839
839
839
N
1
9.83
1.20
115.70
125.53
T
T
T
C5'
C4'
C3'
DT
DT
DT
839
839
839
N
1
8.59
1.40
114.30
122.89
T
T
T
N1
C1'
C2'
DT
DT
DT
839
839
839
N
1
11.45
1.20
119.70
131.15
T
T
T
C3'
O3'
P
DT
DT
DG
839
839
840
Y
1
-6.11
0.90
105.70
99.59
T
T
T
O5'
P
OP2
DG
DG
DG
840
840
840
N
1
2.74
0.30
108.30
111.04
T
T
T
O4'
C1'
N9
DG
DG
DG
840
840
840
N
1
3.26
0.50
113.10
116.36
T
T
T
N7
C8
N9
DG
DG
DG
840
840
840
N
1
-3.99
0.40
106.40
102.41
T
T
T
C8
N9
C4
DG
DG
DG
840
840
840
N
1
2.48
0.40
105.40
107.88
T
T
T
N9
C4
C5
DG
DG
DG
840
840
840
N
1
-9.88
0.60
119.90
110.02
T
T
T
N1
C6
O6
DG
DG
DG
840
840
840
N
1
9.34
0.60
128.60
137.94
T
T
T
C5
C6
O6
DG
DG
DG
840
840
840
N
1
-5.04
0.80
102.40
97.36
T
T
T
C3'
C2'
C1'
DG
DG
DG
841
841
841
N
1
3.23
0.50
106.80
110.03
T
T
T
O4'
C1'
C2'
DG
DG
DG
841
841
841
N
1
2.13
0.30
108.30
110.43
T
T
T
O4'
C1'
N9
DG
DG
DG
841
841
841
N
1
-6.47
0.60
125.10
118.63
T
T
T
C6
N1
C2
DG
DG
DG
841
841
841
N
1
5.04
0.50
111.90
116.94
T
T
T
C2
N3
C4
DG
DG
DG
841
841
841
N
1
5.82
0.50
111.50
117.32
T
T
T
C5
C6
N1
DG
DG
DG
841
841
841
N
1
4.34
0.70
119.90
124.24
T
T
T
N3
C2
N2
DG
DG
DG
841
841
841
N
1
4.86
0.60
106.00
110.86
T
T
T
O4'
C4'
C3'
DG
DG
DG
842
842
842
N
1
16.03
2.00
112.30
128.33
T
T
T
C4'
C3'
O3'
DG
DG
DG
842
842
842
N
1
-6.26
0.70
102.20
95.94
T
T
T
C4'
C3'
C2'
DG
DG
DG
842
842
842
N
1
11.10
1.20
102.50
113.60
T
T
T
C3'
C2'
C1'
DG
DG
DG
842
842
842
N
1
-7.34
0.80
105.90
98.56
T
T
T
O4'
C1'
C2'
DG
DG
DG
842
842
842
N
1
-14.83
0.70
108.00
93.17
T
T
T
O4'
C1'
N9
DG
DG
DG
842
842
842
N
1
-4.45
0.60
125.10
120.65
T
T
T
C6
N1
C2
DG
DG
DG
842
842
842
N
1
3.53
0.50
111.50
115.03
T
T
T
C5
C6
N1
DG
DG
DG
842
842
842
N
1
-5.10
0.40
110.80
105.70
T
T
T
C4
C5
N7
DG
DG
DG
842
842
842
N
1
4.23
0.50
104.30
108.53
T
T
T
C5
N7
C8
DG
DG
DG
842
842
842
N
1
-2.78
0.40
106.40
103.62
T
T
T
C8
N9
C4
DG
DG
DG
842
842
842
N
1
4.56
0.40
105.40
109.96
T
T
T
N9
C4
C5
DG
DG
DG
842
842
842
N
1
4.69
0.60
130.40
135.09
T
T
T
C6
C5
N7
DG
DG
DG
842
842
842
N
1
-3.84
0.60
119.90
116.06
T
T
T
N1
C6
O6
DG
DG
DG
842
842
842
N
1
9.76
0.60
106.00
115.76
T
T
T
O4'
C4'
C3'
DG
DG
DG
843
843
843
N
1
-8.79
1.00
110.10
101.31
T
T
T
C1'
O4'
C4'
DG
DG
DG
843
843
843
N
1
-12.70
0.70
102.20
89.50
T
T
T
C4'
C3'
C2'
DG
DG
DG
843
843
843
N
1
-10.03
0.80
105.90
95.87
T
T
T
O4'
C1'
C2'
DG
DG
DG
843
843
843
N
1
-9.83
0.70
108.00
98.17
T
T
T
O4'
C1'
N9
DG
DG
DG
843
843
843
N
1
-3.42
0.40
110.80
107.38
T
T
T
C4
C5
N7
DG
DG
DG
843
843
843
N
1
4.49
0.50
104.30
108.79
T
T
T
C5
N7
C8
DG
DG
DG
843
843
843
N
1
-3.13
0.40
106.40
103.27
T
T
T
C8
N9
C4
DG
DG
DG
843
843
843
N
1
2.93
0.40
105.40
108.33
T
T
T
N9
C4
C5
DG
DG
DG
843
843
843
N
1
-3.78
0.60
119.90
116.12
T
T
T
N1
C6
O6
DG
DG
DG
843
843
843
N
1
-10.98
1.80
114.10
103.12
T
T
T
C5'
C4'
C3'
DT
DT
DT
844
844
844
N
1
-4.67
0.70
108.00
103.33
T
T
T
O4'
C1'
N1
DT
DT
DT
844
844
844
N
1
-4.52
0.50
121.30
116.78
T
T
T
C6
N1
C2
DT
DT
DT
844
844
844
N
1
4.09
0.60
114.60
118.69
T
T
T
N1
C2
N3
DT
DT
DT
844
844
844
N
1
7.36
0.60
115.20
122.56
T
T
T
N3
C4
C5
DT
DT
DT
844
844
844
N
1
-11.92
0.60
118.00
106.08
T
T
T
C4
C5
C6
DT
DT
DT
844
844
844
N
1
8.04
0.60
123.70
131.74
T
T
T
C5
C6
N1
DT
DT
DT
844
844
844
N
1
-10.59
0.60
119.90
109.31
T
T
T
N3
C4
O4
DT
DT
DT
844
844
844
N
1
10.43
0.60
119.00
129.43
T
T
T
C4
C5
C7
DT
DT
DT
844
844
844
N
1
-4.67
0.40
121.90
117.23
T
T
T
N3
C4
C5
DC
DC
DC
845
845
845
N
1
3.98
0.50
117.40
121.38
T
T
T
C4
C5
C6
DC
DC
DC
845
845
845
N
1
5.64
0.70
120.20
125.84
T
T
T
C5
C4
N4
DC
DC
DC
845
845
845
N
1
-11.38
0.70
108.00
96.62
T
T
T
O4'
C1'
N1
DC
DC
DC
846
846
846
N
1
4.13
0.50
119.90
124.03
T
T
T
C2
N3
C4
DC
DC
DC
846
846
846
N
1
-4.77
0.40
121.90
117.13
T
T
T
N3
C4
C5
DC
DC
DC
846
846
846
N
1
3.82
0.60
106.00
109.82
T
T
T
O4'
C4'
C3'
DT
DT
DT
847
847
847
N
1
-4.90
0.70
102.20
97.30
T
T
T
C4'
C3'
C2'
DT
DT
DT
847
847
847
N
1
-4.28
0.60
127.20
122.92
T
T
T
C2
N3
C4
DT
DT
DT
847
847
847
N
1
5.11
0.60
115.20
120.31
T
T
T
N3
C4
C5
DT
DT
DT
847
847
847
N
1
-5.10
0.60
118.00
112.90
T
T
T
C4
C5
C6
DT
DT
DT
847
847
847
N
1
-4.56
0.60
119.90
115.34
T
T
T
N3
C4
O4
DT
DT
DT
847
847
847
N
1
21.44
2.50
111.00
132.44
P
P
P
O5'
C5'
C4'
DA
DA
DA
867
867
867
N
1
-7.08
0.40
104.50
97.42
P
P
P
O4'
C4'
C3'
DA
DA
DA
867
867
867
N
1
7.35
0.70
110.30
117.65
P
P
P
C1'
O4'
C4'
DA
DA
DA
867
867
867
N
1
10.21
0.30
108.30
118.51
P
P
P
O4'
C1'
N9
DA
DA
DA
867
867
867
N
1
3.69
0.60
118.60
122.29
P
P
P
N1
C6
N6
DA
DA
DA
867
867
867
N
1
-6.29
0.80
123.70
117.41
P
P
P
C5
C6
N6
DA
DA
DA
867
867
867
N
1
7.52
0.90
116.20
123.72
P
P
P
N1
C2
N2
DG
DG
DG
868
868
868
N
1
-6.27
0.70
119.90
113.63
P
P
P
N3
C2
N2
DG
DG
DG
868
868
868
N
1
8.46
0.60
119.90
128.36
P
P
P
N1
C6
O6
DG
DG
DG
868
868
868
N
1
-7.01
0.60
128.60
121.59
P
P
P
C5
C6
O6
DG
DG
DG
868
868
868
N
1
-4.08
0.40
104.50
100.42
P
P
P
O4'
C4'
C3'
DG
DG
DG
869
869
869
N
1
8.13
0.30
108.30
116.43
P
P
P
O4'
C1'
N9
DG
DG
DG
869
869
869
N
1
4.62
0.50
111.90
116.52
P
P
P
C2
N3
C4
DG
DG
DG
869
869
869
N
1
-3.08
0.50
128.60
125.52
P
P
P
N3
C4
C5
DG
DG
DG
869
869
869
N
1
-10.70
1.20
119.70
109.00
P
P
P
C3'
O3'
P
DG
DG
DA
869
869
870
Y
1
-8.34
0.90
105.70
97.36
P
P
P
O5'
P
OP2
DA
DA
DA
870
870
870
N
1
6.01
0.60
106.00
112.01
P
P
P
O4'
C4'
C3'
DA
DA
DA
870
870
870
N
1
5.37
0.50
106.80
112.17
P
P
P
O4'
C1'
C2'
DA
DA
DA
870
870
870
N
1
4.78
0.30
108.30
113.08
P
P
P
O4'
C1'
N9
DA
DA
DA
870
870
870
N
1
-5.05
0.60
118.60
113.55
P
P
P
C6
N1
C2
DA
DA
DA
870
870
870
N
1
6.30
0.50
129.30
135.60
P
P
P
N1
C2
N3
DA
DA
DA
870
870
870
N
1
-5.80
0.50
110.60
104.80
P
P
P
C2
N3
C4
DA
DA
DA
870
870
870
N
1
6.61
1.10
110.50
117.11
P
P
P
O3'
P
OP2
DA
DC
DC
870
871
871
Y
1
6.88
1.10
110.50
117.38
P
P
P
O3'
P
OP1
DA
DC
DC
870
871
871
Y
1
-11.69
1.50
119.60
107.91
P
P
P
OP1
P
OP2
DC
DC
DC
871
871
871
N
1
4.67
0.60
106.00
110.67
P
P
P
O4'
C4'
C3'
DC
DC
DC
871
871
871
N
1
6.12
0.30
108.30
114.42
P
P
P
O4'
C1'
N1
DC
DC
DC
871
871
871
N
1
9.70
0.60
106.00
115.70
P
P
P
O4'
C4'
C3'
DC
DC
DC
872
872
872
N
1
-9.33
1.00
110.10
100.77
P
P
P
C1'
O4'
C4'
DC
DC
DC
872
872
872
N
1
-5.75
0.70
102.20
96.45
P
P
P
C4'
C3'
C2'
DC
DC
DC
872
872
872
N
1
7.43
1.20
102.50
109.93
P
P
P
C3'
C2'
C1'
DC
DC
DC
872
872
872
N
1
6.81
1.10
110.50
117.31
P
P
P
O3'
P
OP1
DC
DOC
DOC
872
873
873
Y
1
3.01
0.50
120.30
123.31
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
71
71
71
N
1
-4.23
0.50
120.30
116.07
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
103
103
103
N
1
-6.42
0.50
120.30
113.88
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
122
122
122
N
1
-11.95
1.60
100.20
88.25
A
A
A
CG
SD
CE
MET
MET
MET
135
135
135
N
1
-4.81
0.50
120.30
115.49
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
172
172
172
N
1
-3.89
0.50
120.30
116.41
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
184
184
184
N
1
-11.57
1.50
103.20
91.63
A
A
A
N
CD
CG
PRO
PRO
PRO
215
215
215
N
1
-13.28
2.20
111.50
98.22
A
A
A
N
CA
CB
VAL
VAL
VAL
315
315
315
N
1
-3.26
0.50
120.30
117.04
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
343
343
343
N
1
23.65
1.80
110.60
134.25
A
A
A
N
CA
CB
TYR
TYR
TYR
355
355
355
N
1
T
T
C5'
C4'
DT
DT
839
839
0.061
0.007
1.512
1.573
N
1
T
T
O3'
C3'
DT
DT
839
839
0.089
0.013
1.435
1.524
N
1
T
T
C4
C5
DG
DG
841
841
-0.045
0.007
1.379
1.334
N
1
T
T
O3'
C3'
DG
DG
842
842
-0.091
0.006
1.419
1.328
N
1
T
T
C5
N7
DG
DG
842
842
-0.036
0.006
1.388
1.352
N
1
T
T
C2
N2
DG
DG
842
842
0.061
0.010
1.341
1.402
N
1
T
T
P
O5'
DG
DG
843
843
0.078
0.010
1.593
1.671
N
1
T
T
C3'
C2'
DG
DG
843
843
-0.050
0.008
1.516
1.466
N
1
T
T
C2'
C1'
DG
DG
843
843
0.076
0.010
1.519
1.595
N
1
T
T
O4'
C1'
DG
DG
843
843
-0.098
0.012
1.418
1.320
N
1
T
T
C5
N7
DG
DG
843
843
-0.056
0.006
1.388
1.332
N
1
T
T
O5'
C5'
DT
DT
844
844
0.097
0.016
1.440
1.537
N
1
T
T
C2'
C1'
DT
DT
844
844
0.072
0.010
1.519
1.591
N
1
T
T
O3'
C3'
DT
DT
844
844
-0.095
0.006
1.419
1.324
N
1
T
T
C1'
N1
DT
DT
844
844
0.090
0.013
1.488
1.578
N
1
T
T
N1
C2
DT
DT
844
844
-0.048
0.008
1.376
1.328
N
1
T
T
C4
C5
DT
DT
844
844
0.066
0.009
1.445
1.511
N
1
T
T
C5
C6
DT
DT
844
844
0.068
0.007
1.339
1.407
N
1
T
T
C5
C7
DT
DT
844
844
0.104
0.006
1.496
1.600
N
1
T
T
P
O5'
DC
DC
845
845
0.072
0.010
1.593
1.665
N
1
T
T
N1
C6
DC
DC
845
845
-0.058
0.006
1.367
1.309
N
1
T
T
N3
C4
DC
DC
845
845
-0.043
0.007
1.335
1.292
N
1
T
T
C4
N4
DC
DC
846
846
0.056
0.009
1.335
1.391
N
1
T
T
C5'
C4'
DT
DT
847
847
0.042
0.007
1.512
1.554
N
1
T
T
O3'
C3'
DT
DT
847
847
0.136
0.013
1.435
1.571
N
1
T
T
C5
C7
DT
DT
847
847
0.087
0.006
1.496
1.583
N
1
P
P
C5'
C4'
DA
DA
867
867
0.047
0.007
1.512
1.559
N
1
P
P
C4
C5
DA
DA
867
867
-0.042
0.007
1.383
1.341
N
1
P
P
P
O5'
DA
DA
870
870
0.060
0.010
1.593
1.653
N
1
P
P
C2'
C1'
DA
DA
870
870
0.070
0.010
1.519
1.589
N
1
P
P
C8
N9
DA
DA
870
870
-0.053
0.008
1.373
1.320
N
1
P
P
O3'
P
DA
DC
870
871
0.111
0.012
1.607
1.718
Y
1
P
P
O4'
C1'
DC
DC
871
871
-0.089
0.012
1.418
1.329
N
1
P
P
O3'
C3'
DC
DC
871
871
-0.101
0.006
1.419
1.318
N
1
P
P
C4
N4
DC
DC
871
871
-0.056
0.009
1.335
1.279
N
1
P
P
O4'
C4'
DC
DC
872
872
0.091
0.009
1.449
1.540
N
1
P
P
O3'
C3'
DC
DC
872
872
-0.121
0.006
1.419
1.298
N
1
A
A
CB
OG
SER
SER
46
46
-0.087
0.013
1.418
1.331
N
1
A
A
CZ
NH2
ARG
ARG
103
103
0.113
0.013
1.326
1.439
N
1
A
A
CG
SD
MET
MET
105
105
0.200
0.026
1.807
2.007
N
1
A
A
CB
OG
SER
SER
117
117
0.103
0.013
1.418
1.521
N
1
A
A
CG
CD
ARG
ARG
122
122
0.185
0.025
1.515
1.700
N
1
A
A
CD
NE
ARG
ARG
122
122
-0.110
0.017
1.460
1.350
N
1
A
A
CD
OE1
GLU
GLU
127
127
0.096
0.011
1.252
1.348
N
1
A
A
CD
OE1
GLU
GLU
134
134
0.073
0.011
1.252
1.325
N
1
A
A
CA
CB
VAL
VAL
151
151
-0.136
0.021
1.543
1.407
N
1
A
A
CD
NE
ARG
ARG
184
184
-0.132
0.017
1.460
1.328
N
1
A
A
CG
CD
GLU
GLU
185
185
0.091
0.015
1.515
1.606
N
1
A
A
CA
C
LYS
LYS
214
214
-0.248
0.026
1.525
1.277
N
1
A
A
N
CA
ASN
ASN
216
216
0.139
0.020
1.459
1.598
N
1
A
A
CB
CG2
VAL
VAL
258
258
-0.136
0.021
1.524
1.388
N
1
A
A
N
CA
TYR
TYR
355
355
0.138
0.020
1.459
1.597
N
1
T
P
O3'
O5'
DT
DA
847
867
1.80
1_555
10_665
1
A
SER
26
-117.59
-81.19
1
A
CYS
37
19.51
61.34
1
A
ASP
52
50.86
-4.76
1
A
LYS
60
58.03
-127.35
1
A
CYS
88
-161.41
85.23
1
A
ASP
146
-163.64
-49.89
1
A
PRO
215
-61.98
-86.70
1
A
HIS
235
-171.19
149.12
1
A
LYS
245
-69.83
-71.14
1
A
GLU
272
-162.76
-8.81
1
A
SER
276
-77.92
-72.90
1
A
ASP
289
-170.23
106.10
1
A
PHE
308
-168.03
83.60
1
A
LYS
310
78.79
-7.00
1
A
GLU
314
109.07
33.94
1
A
VAL
315
-169.70
-36.18
1
A
LYS
318
-143.14
-29.11
1
A
ARG
347
174.25
126.43
1
A
SER
350
163.85
-76.56
1
A
LYS
353
-63.65
5.54
1
A
HIS
354
54.26
-25.53
1
A
TYR
355
-172.88
124.93
1
A
CYS
362
-171.52
130.77
1
A
CYS
411
-121.78
-169.63
44.26
0.93000
0.46000
0.00000
0.93000
0.00000
-1.39000
0.924
0.897
0.272
0.228
2.50
50.00
2027
20339
10.000
98.1
9.853
0.223
RANDOM
LIKELY RESIDUAL
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.478
0.301
0.80
0.80
1.40
PDB ENTRY 1T3N
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
2.50
50.00
79
3305
30
322
2874
0.050
0.021
3299
3.190
2.112
4524
7.347
5.000
370
0.208
0.200
516
0.016
0.020
2309
0.302
0.200
1374
0.246
0.200
164
0.337
0.200
19
0.380
0.200
8
1.884
1.500
1860
3.335
2.000
2996
4.468
3.000
1439
6.253
4.500
1528
0.307
0.254
2.56
166
1276
20
2.500
50.000
2ALZ
20339
0.08
1
15.0
9.8
99.0
0.437
2.5
2.59
6.6
1
100
refinement
Murshudov, G.N.
ccp4@dl.ac.uk
Fortran
http://www.ccp4.ac.uk/main.html
REFMAC
program
5.1.24
data extraction
PDB
sw-help@rcsb.rutgers.edu
May. 30, 2005
C++
http://pdb.rutgers.edu/software/
PDB_EXTRACT
package
1.700
data reduction
HKL-2000
data scaling
SCALEPACK
phasing
AMoRE
Ternary Complex of hPoli with DNA and dCTP
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
5
N
N
6
N
N
6
N
N
6
N
N
A
CYS
37
C
CYS
13
HELX_P
A
ASN
47
C
ASN
23
1
1
11
A
PRO
48
C
PRO
24
HELX_P
A
LYS
51
C
LYS
27
5
2
4
A
ASN
67
C
ASN
43
HELX_P
A
LEU
73
C
LEU
49
1
3
7
A
VAL
81
C
VAL
57
HELX_P
A
LYS
87
C
LYS
63
1
4
7
A
LEU
99
C
LEU
75
HELX_P
A
SER
117
C
SER
93
1
5
19
A
LEU
132
C
LEU
108
HELX_P
A
LEU
143
C
LEU
119
1
6
12
A
ASP
146
C
ASP
122
HELX_P
A
ALA
150
C
ALA
126
5
7
5
A
ASP
167
C
ASP
143
HELX_P
A
GLY
192
C
GLY
168
1
8
26
A
ASN
202
C
ASN
178
HELX_P
A
GLY
211
C
GLY
187
1
9
10
A
LEU
222
C
LEU
198
HELX_P
A
GLU
224
C
GLU
200
5
10
3
A
SER
225
C
SER
201
HELX_P
A
SER
232
C
SER
208
1
11
8
A
HIS
235
C
HIS
211
HELX_P
A
ILE
239
C
ILE
215
5
12
5
A
GLY
243
C
GLY
219
HELX_P
A
LEU
253
C
LEU
229
1
13
11
A
SER
257
C
SER
233
HELX_P
A
PHE
264
C
PHE
240
1
14
8
A
SER
265
C
SER
241
HELX_P
A
PHE
286
C
PHE
262
1
15
22
A
LYS
318
C
LYS
294
HELX_P
A
GLY
336
C
GLY
312
1
16
19
A
PRO
365
C
PRO
341
HELX_P
A
GLN
370
C
GLN
346
1
17
6
A
MET
380
C
MET
356
HELX_P
A
MET
394
C
MET
370
1
18
15
covale
1.559
both
P
DC
872
B
O3'
DC
6
1_555
P
DOC
873
B
P
DOC
7
1_555
metalc
2.228
A
ASP
34
C
OD2
ASP
10
1_555
A
MG
871
E
MG
MG
1_555
metalc
2.937
A
ASP
34
C
OD1
ASP
10
1_555
A
MG
872
D
MG
MG
1_555
metalc
2.095
A
LEU
35
C
O
LEU
11
1_555
A
MG
871
E
MG
MG
1_555
metalc
2.082
A
ASP
126
C
OD1
ASP
102
1_555
A
MG
871
E
MG
MG
1_555
metalc
3.073
A
ASP
126
C
OD2
ASP
102
1_555
A
MG
872
D
MG
MG
1_555
metalc
2.280
A
GLU
127
C
OE2
GLU
103
1_555
A
MG
872
D
MG
MG
1_555
metalc
2.332
A
MG
871
E
MG
MG
1_555
A
DCP
875
F
O1G
DCP
1_555
metalc
2.313
A
MG
871
E
MG
MG
1_555
A
DCP
875
F
O1A
DCP
1_555
metalc
2.199
A
MG
871
E
MG
MG
1_555
A
DCP
875
F
O2B
DCP
1_555
metalc
2.363
A
MG
872
D
MG
MG
1_555
A
DCP
875
F
O1A
DCP
1_555
hydrog
WATSON-CRICK
T
DG
841
A
N1
DG
3
1_555
P
DOC
873
B
N3
DOC
7
1_555
hydrog
WATSON-CRICK
T
DG
841
A
N2
DG
3
1_555
P
DOC
873
B
O2
DOC
7
1_555
hydrog
WATSON-CRICK
T
DG
841
A
O6
DG
3
1_555
P
DOC
873
B
N4
DOC
7
1_555
hydrog
WATSON-CRICK
T
DG
842
A
N1
DG
4
1_555
P
DC
872
B
N3
DC
6
1_555
hydrog
WATSON-CRICK
T
DG
842
A
N2
DG
4
1_555
P
DC
872
B
O2
DC
6
1_555
hydrog
WATSON-CRICK
T
DG
842
A
O6
DG
4
1_555
P
DC
872
B
N4
DC
6
1_555
hydrog
WATSON-CRICK
T
DG
843
A
N1
DG
5
1_555
P
DC
871
B
N3
DC
5
1_555
hydrog
WATSON-CRICK
T
DG
843
A
N2
DG
5
1_555
P
DC
871
B
O2
DC
5
1_555
hydrog
WATSON-CRICK
T
DG
843
A
O6
DG
5
1_555
P
DC
871
B
N4
DC
5
1_555
hydrog
WATSON-CRICK
T
DT
844
A
N3
DT
6
1_555
P
DA
870
B
N1
DA
4
1_555
hydrog
WATSON-CRICK
T
DT
844
A
O4
DT
6
1_555
P
DA
870
B
N6
DA
4
1_555
hydrog
WATSON-CRICK
T
DC
845
A
N3
DC
7
1_555
P
DG
869
B
N1
DG
3
1_555
hydrog
WATSON-CRICK
T
DC
845
A
N4
DC
7
1_555
P
DG
869
B
O6
DG
3
1_555
hydrog
WATSON-CRICK
T
DC
845
A
O2
DC
7
1_555
P
DG
869
B
N2
DG
3
1_555
hydrog
WATSON-CRICK
T
DC
846
A
N3
DC
8
1_555
P
DG
868
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
T
DC
846
A
N4
DC
8
1_555
P
DG
868
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
T
DC
846
A
O2
DC
8
1_555
P
DG
868
B
N2
DG
2
1_555
hydrog
WATSON-CRICK
T
DT
847
A
N3
DT
9
1_555
P
DA
867
B
N1
DA
1
1_555
hydrog
WATSON-CRICK
T
DT
847
A
O4
DT
9
1_555
P
DA
867
B
N6
DA
1
1_555
Transferase/DNA
right handed, DNA polymerase, ternary complex, template G. incoming dCTP, Hoogsteen base pair, Transferase-DNA COMPLEX
POLI_HUMAN
UNP
3
25
Q9UNA4
ASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGEDLTRYRE
MSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMR
EAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTF
SPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTVRL
IIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLK
2ALZ
PDB
1
2ALZ
2ALZ
PDB
2
2ALZ
25
414
2ALZ
25
414
Q9UNA4
A
1
1
390
839
847
2ALZ
839
847
2ALZ
T
2
1
9
867
873
2ALZ
867
873
2ALZ
P
3
1
7
6
4
4
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
120
C
VAL
96
A
LEU
123
C
LEU
99
A
GLU
127
C
GLU
103
A
ASP
131
C
ASP
107
A
ILE
30
C
ILE
6
A
LEU
35
C
LEU
11
A
GLY
195
C
GLY
171
A
ALA
200
C
ALA
176
A
GLN
218
C
GLN
194
A
VAL
220
C
VAL
196
A
HIS
156
C
HIS
132
A
VAL
157
C
VAL
133
A
MET
79
C
MET
55
A
ASN
80
C
ASN
56
A
LEU
62
C
LEU
38
A
CYS
66
C
CYS
42
A
LEU
55
C
LEU
31
A
GLN
59
C
GLN
35
A
VAL
92
C
VAL
68
A
ASN
95
C
ASN
71
A
SER
301
C
SER
277
A
SER
307
C
SER
283
A
LEU
405
C
LEU
381
A
LYS
414
C
LYS
390
A
LYS
338
C
LYS
314
A
ILE
346
C
ILE
322
A
GLU
358
C
GLU
334
A
PRO
363
C
PRO
339
BINDING SITE FOR RESIDUE MG A 872
A
MG
872
Software
6
BINDING SITE FOR RESIDUE MG A 871
A
MG
871
Software
5
BINDING SITE FOR RESIDUE DCP A 875
A
DCP
875
Software
21
A
ASP
34
C
ASP
10
6
1_555
A
ASP
126
C
ASP
102
6
1_555
A
GLU
127
C
GLU
103
6
1_555
A
MG
871
E
MG
6
1_555
A
DCP
875
F
DCP
6
1_555
P
DOC
873
B
DOC
7
6
1_555
A
ASP
34
C
ASP
10
5
1_555
A
LEU
35
C
LEU
11
5
1_555
A
ASP
126
C
ASP
102
5
1_555
A
MG
872
D
MG
5
1_555
A
DCP
875
F
DCP
5
1_555
A
ASP
34
C
ASP
10
21
1_555
A
LEU
35
C
LEU
11
21
1_555
A
ASP
36
C
ASP
12
21
1_555
A
CYS
37
C
CYS
13
21
1_555
A
PHE
38
C
PHE
14
21
1_555
A
TYR
39
C
TYR
15
21
1_555
A
VAL
64
C
VAL
40
21
1_555
A
THR
65
C
THR
41
21
1_555
A
TYR
68
C
TYR
44
21
1_555
A
ARG
71
C
ARG
47
21
1_555
A
LYS
77
C
LYS
53
21
1_555
A
ASP
126
C
ASP
102
21
1_555
A
LYS
214
C
LYS
190
21
1_555
A
MG
871
E
MG
21
1_555
A
MG
872
D
MG
21
1_555
A
HOH
908
I
HOH
21
1_555
A
HOH
923
I
HOH
21
1_555
P
DOC
873
B
DOC
7
21
1_555
T
DG
840
A
DG
2
21
1_555
T
DG
841
A
DG
3
21
1_555
T
HOH
903
G
HOH
21
1_555
179
P 65 2 2