0.010192 0.005884 0.000000 0.000000 0.011769 0.000000 0.000000 0.000000 0.004930 0.00000 0.00000 0.00000 Nair, D.T. Johnson, R.E. Prakash, L. Prakash, S. Aggarwal, A.K. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 98.114 98.114 202.823 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C9 H16 N3 O13 P3 467.157 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE non-polymer C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O6 P 291.198 n 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N N N 159 N C N 160 N N N 161 N C N 162 N C N 163 N C N 164 N O N 165 N N N 166 R C N 167 N C N 168 S C N 169 R C N 170 N O N 171 N O N 172 N C N 173 N O N 174 R P N 175 N O N 176 N O N 177 N O N 178 S P N 179 N O N 180 N O N 181 N O N 182 N P N 183 N O N 184 N O N 185 N O N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N O N 203 N P N 204 N O N 205 N O N 206 N O N 207 N C N 208 R C N 209 N O N 210 S C N 211 N O N 212 N C N 213 R C Y 214 N N Y 215 N C Y 216 N N Y 217 N C N 218 N C N 219 N O N 220 N N N 221 N C N 222 N N N 223 N N Y 224 N C N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N N N 240 N C N 241 N N N 242 N C N 243 N C N 244 N C N 245 N O N 246 N N N 247 R C N 248 N C N 249 N C N 250 S C N 251 N O N 252 N C N 253 N O N 254 N P N 255 N O N 256 N O N 257 N O N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N O N 273 N P N 274 N O N 275 N O N 276 N O N 277 N C N 278 R C N 279 N O N 280 S C N 281 N O N 282 N C N 283 R C N 284 N N N 285 N C N 286 N O N 287 N N N 288 N C N 289 N O N 290 N C N 291 N C N 292 N C N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N N N 309 S C N 310 N C N 311 N O N 312 N C N 313 N C N 314 N C N 315 N O N 316 N N N 317 N O N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N N N 329 S C N 330 N C N 331 N O N 332 N C N 333 N C N 334 N C N 335 N O N 336 N O N 337 N O N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N N N 348 N C N 349 N C N 350 N O N 351 N O N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N N N 358 S C N 359 N C N 360 N O N 361 N C Y 362 N C Y 363 N N Y 364 N C Y 365 N C Y 366 N N N 367 N O N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N O N 379 N H N 380 N H N 381 N N N 382 S C N 383 N C N 384 N O N 385 S C N 386 N C N 387 N C N 388 N C N 389 N O N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N N N 404 S C N 405 N C N 406 N O N 407 N C N 408 N C N 409 N C N 410 N C N 411 N O N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N N N 426 S C N 427 N C N 428 N O N 429 N C N 430 N C N 431 N C N 432 N C N 433 N N N 434 N O N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N N N 451 S C N 452 N C N 453 N O N 454 N C N 455 N C N 456 N S N 457 N C N 458 N O N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N MG N 471 N N N 472 S C N 473 N C N 474 N O N 475 N C Y 476 N C Y 477 N C Y 478 N C Y 479 N C Y 480 N C Y 481 N C N 482 N O N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 491 N H N 492 N H N 493 N H N 494 N N N 495 S C N 496 N C N 497 N O N 498 N C N 499 N C N 500 N C N 501 N O N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N N N 512 S C N 513 N C N 514 N O N 515 N C N 516 N O N 517 N O N 518 N H N 519 N H N 520 N H N 521 N H N 522 N H N 523 N H N 524 N H N 525 N N N 526 S C N 527 N C N 528 N O N 529 R C N 530 N O N 531 N C N 532 N O N 533 N H N 534 N H N 535 N H N 536 N H N 537 N H N 538 N H N 539 N H N 540 N H N 541 N H N 542 N N N 543 S C N 544 N C N 545 N O N 546 N C Y 547 N C Y 548 N C Y 549 N C Y 550 N C Y 551 N C Y 552 N C N 553 N O N 554 N O N 555 N H N 556 N H N 557 N H N 558 N H N 559 N H N 560 N H N 561 N H N 562 N H N 563 N H N 564 N H N 565 N H N 566 N N N 567 S C N 568 N C N 569 N O N 570 N C N 571 N C N 572 N C N 573 N O N 574 N H N 575 N H N 576 N H N 577 N H N 578 N H N 579 N H N 580 N H N 581 N H N 582 N H N 583 N H N 584 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N doub N 161 N doub N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N doub N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N doub N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing Y 224 N sing Y 225 N sing Y 226 N doub N 227 N sing Y 228 N sing N 229 N sing Y 230 N doub N 231 N doub N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N doub N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N doub N 245 N doub N 246 N sing N 247 N sing N 248 N doub N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N doub N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N doub N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N doub N 304 N sing N 305 N sing N 306 N doub N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N doub N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N doub N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N doub N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N doub N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N doub N 364 N sing N 365 N sing N 366 N sing N 367 N sing Y 368 N sing Y 369 N doub Y 370 N doub N 371 N sing Y 372 N sing N 373 N sing Y 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N doub N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N doub N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N doub N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N doub N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N doub N 472 N sing N 473 N sing N 474 N sing N 475 N sing Y 476 N doub Y 477 N sing Y 478 N sing N 479 N sing Y 480 N doub N 481 N sing Y 482 N doub N 483 N sing Y 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N doub N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N doub N 512 N sing N 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N doub N 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N sing N 530 N sing N 531 N sing N 532 N sing N 533 N sing N 534 N sing N 535 N sing N 536 N sing N 537 N sing N 538 N sing N 539 N sing N 540 N doub N 541 N sing N 542 N sing N 543 N sing N 544 N sing Y 545 N doub Y 546 N sing Y 547 N sing N 548 N sing Y 549 N doub N 550 N sing Y 551 N doub N 552 N sing Y 553 N sing N 554 N sing N 555 N sing N 556 N sing N 557 N sing N 558 N sing N 559 N sing N 560 N sing N 561 N sing N 562 N sing N 563 N sing N 564 N doub N 565 N sing N 566 N sing N 567 N sing N 568 N sing N 569 N sing N 570 N sing N 571 N sing N 572 N sing N 573 N sing N 574 N sing N 575 N sing UK Structure STRUE6 2005 0969-2126 13 1569 1577 10.1016/j.str.2005.08.010 16216587 Human DNA Polymerase iota Incorporates dCTP Opposite Template G via a G.C+ Hoogsteen Base Pair. 2005 10.2210/pdb2alz/pdb pdb_00002alz 110.0 1 CCD 2004-10-01 ADSC QUANTUM 315 SINGLE WAVELENGTH M x-ray 1 1.072 1.0 X25 NSLS 1.072 SYNCHROTRON NSLS BEAMLINE X25 DNA template 2762.808 5'-D(*TP*GP*GP*GP*GP*TP*CP*CP*T)-3' 1 syn polymer DNA primer 2091.414 5'-D(*AP*GP*GP*AP*CP*CP*(DOC))-3' 1 syn polymer 44037.047 DNA polymerase iota 2.7.7.7 1 man polymer 24.305 MAGNESIUM ION 2 syn non-polymer 467.157 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE 1 syn non-polymer 18.015 water 79 nat water RAD30 homolog B, Eta2 E.C.2.7.7.7 no no (DT)(DG)(DG)(DG)(DG)(DT)(DC)(DC)(DT) TGGGGTCCT T polydeoxyribonucleotide no yes (DA)(DG)(DG)(DA)(DC)(DC)(DOC) AGGACCC P polydeoxyribonucleotide no no ASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGEDLTRYRE MSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMR EAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTF SPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTVRL IIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLK ASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGEDLTRYRE MSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMR EAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTF SPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTVRL IIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo baker's yeast Saccharomyces sample POLI, RAD30B 9606 Homo sapiens 4932 Saccharomyces cerevisiae BJ5464 plasmid pBJ941 1 2.70 54.20 6.50 16% PEG 5K MME, 0.4 M Ammonium Sulfate, 0.1 M MES buffer, pH 6.5, hanging drop, pH 6.50 1.714 1 19 T 841 P 873 0.892 T_DG841:DOC873_P 1 -1.275 -0.143 -0.124 -0.080 -11.285 1 19 T 842 P 872 -0.910 T_DG842:DC872_P 2 -6.326 -0.047 -0.284 -0.216 -13.053 1 19 T 843 P 871 -2.162 T_DG843:DC871_P 3 -9.659 0.026 -0.600 -0.155 -11.856 1 20 T 844 P 870 -2.914 T_DT844:DA870_P 4 -5.877 -0.081 -0.171 -0.203 0.033 1 19 T 845 P 869 -0.810 T_DC845:DG869_P 5 -3.074 0.014 -0.036 -0.083 -4.237 1 19 T 846 P 868 2.124 T_DC846:DG868_P 6 -2.115 0.058 -0.116 0.003 -5.591 1 20 T 847 P 867 -4.158 T_DT847:DA867_P 7 -5.930 0.007 0.266 -0.247 3.603 26.140 T T 841 842 8.338 P P 873 872 3.793 3.755 0.533 -1.281 TT_DG841DG842:DC872DOC873_PP 1 1.970 -4.375 25.800 -3.994 -0.568 2.670 32.307 T T 842 843 22.788 P P 872 871 3.443 12.331 0.538 -1.509 TT_DG842DG843:DC871DC872_PP 2 4.509 -8.332 29.584 -4.849 -0.184 3.063 32.174 T T 843 844 10.502 P P 871 870 3.261 5.789 -0.589 -0.959 TT_DG843DT844:DA870DC871_PP 3 -1.324 2.403 31.635 -2.740 0.831 3.045 30.868 T T 844 845 5.497 P P 870 869 3.095 2.922 0.008 -0.394 TT_DT844DC845:DG869DA870_PP 4 -0.062 0.117 30.732 -1.274 -0.026 3.451 36.607 T T 845 846 1.421 P P 869 868 3.471 0.892 -0.077 -0.736 TT_DC845DC846:DG868DG869_PP 5 0.603 -0.960 36.592 -1.301 0.211 3.374 29.022 T T 846 847 5.608 P P 868 867 3.366 2.800 -0.771 -0.458 TT_DC846DT847:DA867DG868_PP 6 -3.400 6.809 28.693 -1.552 0.763 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_conn_type struct_site repository Initial release Version format compliance Advisory Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2005-10-25 1 1 2008-04-30 1 2 2011-07-13 1 3 2023-08-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn_type.id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2005-08-08 REL REL MG MAGNESIUM ION DCP 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE HOH water 1T3N PDB ENTRY 1T3N PDB experimental model MG 872 4 MG MG 872 A MG 871 4 MG MG 871 A DCP 875 5 DCP DCP 875 A HOH 903 6 HOH HOH 903 T HOH 930 6 HOH HOH 930 T HOH 968 6 HOH HOH 968 T HOH 974 6 HOH HOH 974 T HOH 993 6 HOH HOH 993 T HOH 945 6 HOH HOH 945 P HOH 950 6 HOH HOH 950 P HOH 976 6 HOH HOH 976 P HOH 1014 6 HOH HOH 1014 P HOH 902 6 HOH HOH 902 A HOH 905 6 HOH HOH 905 A HOH 906 6 HOH HOH 906 A HOH 907 6 HOH HOH 907 A HOH 908 6 HOH HOH 908 A HOH 909 6 HOH HOH 909 A HOH 910 6 HOH HOH 910 A HOH 911 6 HOH HOH 911 A HOH 912 6 HOH HOH 912 A HOH 913 6 HOH HOH 913 A HOH 914 6 HOH HOH 914 A HOH 915 6 HOH HOH 915 A HOH 916 6 HOH HOH 916 A HOH 917 6 HOH HOH 917 A HOH 919 6 HOH HOH 919 A HOH 920 6 HOH HOH 920 A HOH 921 6 HOH HOH 921 A HOH 922 6 HOH HOH 922 A HOH 923 6 HOH HOH 923 A HOH 924 6 HOH HOH 924 A HOH 925 6 HOH HOH 925 A HOH 926 6 HOH HOH 926 A HOH 928 6 HOH HOH 928 A HOH 929 6 HOH HOH 929 A HOH 933 6 HOH HOH 933 A HOH 935 6 HOH HOH 935 A HOH 937 6 HOH HOH 937 A HOH 938 6 HOH HOH 938 A HOH 939 6 HOH HOH 939 A HOH 940 6 HOH HOH 940 A HOH 943 6 HOH HOH 943 A HOH 944 6 HOH HOH 944 A HOH 946 6 HOH HOH 946 A HOH 949 6 HOH HOH 949 A HOH 954 6 HOH HOH 954 A HOH 956 6 HOH HOH 956 A HOH 959 6 HOH HOH 959 A HOH 960 6 HOH HOH 960 A HOH 961 6 HOH HOH 961 A HOH 962 6 HOH HOH 962 A HOH 967 6 HOH HOH 967 A HOH 970 6 HOH HOH 970 A HOH 972 6 HOH HOH 972 A HOH 973 6 HOH HOH 973 A HOH 975 6 HOH HOH 975 A HOH 977 6 HOH HOH 977 A HOH 978 6 HOH HOH 978 A HOH 979 6 HOH HOH 979 A HOH 982 6 HOH HOH 982 A HOH 983 6 HOH HOH 983 A HOH 984 6 HOH HOH 984 A HOH 986 6 HOH HOH 986 A HOH 987 6 HOH HOH 987 A HOH 988 6 HOH HOH 988 A HOH 989 6 HOH HOH 989 A HOH 995 6 HOH HOH 995 A HOH 998 6 HOH HOH 998 A HOH 999 6 HOH HOH 999 A HOH 1001 6 HOH HOH 1001 A HOH 1003 6 HOH HOH 1003 A HOH 1006 6 HOH HOH 1006 A HOH 1007 6 HOH HOH 1007 A HOH 1009 6 HOH HOH 1009 A HOH 1011 6 HOH HOH 1011 A HOH 1012 6 HOH HOH 1012 A HOH 1013 6 HOH HOH 1013 A HOH 1015 6 HOH HOH 1015 A HOH 1016 6 HOH HOH 1016 A HOH 1017 6 HOH HOH 1017 A HOH 1018 6 HOH HOH 1018 A T 839 n 1 DT 839 T G 840 n 2 DG 840 T G 841 n 3 DG 841 T G 842 n 4 DG 842 T G 843 n 5 DG 843 T T 844 n 6 DT 844 T C 845 n 7 DC 845 T C 846 n 8 DC 846 T T 847 n 9 DT 847 T A 867 n 1 DA 867 P G 868 n 2 DG 868 P G 869 n 3 DG 869 P A 870 n 4 DA 870 P C 871 n 5 DC 871 P C 872 n 6 DC 872 P DOC 873 n 7 DOC 873 P ALA 25 n 1 ALA 25 A SER 26 n 2 SER 26 A SER 27 n 3 SER 27 A ARG 28 n 4 ARG 28 A VAL 29 n 5 VAL 29 A ILE 30 n 6 ILE 30 A VAL 31 n 7 VAL 31 A HIS 32 n 8 HIS 32 A VAL 33 n 9 VAL 33 A ASP 34 n 10 ASP 34 A LEU 35 n 11 LEU 35 A ASP 36 n 12 ASP 36 A CYS 37 n 13 CYS 37 A PHE 38 n 14 PHE 38 A TYR 39 n 15 TYR 39 A ALA 40 n 16 ALA 40 A GLN 41 n 17 GLN 41 A VAL 42 n 18 VAL 42 A GLU 43 n 19 GLU 43 A MET 44 n 20 MET 44 A ILE 45 n 21 ILE 45 A SER 46 n 22 SER 46 A ASN 47 n 23 ASN 47 A PRO 48 n 24 PRO 48 A GLU 49 n 25 GLU 49 A LEU 50 n 26 LEU 50 A LYS 51 n 27 LYS 51 A ASP 52 n 28 ASP 52 A LYS 53 n 29 LYS 53 A PRO 54 n 30 PRO 54 A LEU 55 n 31 LEU 55 A GLY 56 n 32 GLY 56 A VAL 57 n 33 VAL 57 A GLN 58 n 34 GLN 58 A GLN 59 n 35 GLN 59 A LYS 60 n 36 LYS 60 A TYR 61 n 37 TYR 61 A LEU 62 n 38 LEU 62 A VAL 63 n 39 VAL 63 A VAL 64 n 40 VAL 64 A THR 65 n 41 THR 65 A CYS 66 n 42 CYS 66 A ASN 67 n 43 ASN 67 A TYR 68 n 44 TYR 68 A GLU 69 n 45 GLU 69 A ALA 70 n 46 ALA 70 A ARG 71 n 47 ARG 71 A LYS 72 n 48 LYS 72 A LEU 73 n 49 LEU 73 A GLY 74 n 50 GLY 74 A VAL 75 n 51 VAL 75 A LYS 76 n 52 LYS 76 A LYS 77 n 53 LYS 77 A LEU 78 n 54 LEU 78 A MET 79 n 55 MET 79 A ASN 80 n 56 ASN 80 A VAL 81 n 57 VAL 81 A ARG 82 n 58 ARG 82 A ASP 83 n 59 ASP 83 A ALA 84 n 60 ALA 84 A LYS 85 n 61 LYS 85 A GLU 86 n 62 GLU 86 A LYS 87 n 63 LYS 87 A CYS 88 n 64 CYS 88 A PRO 89 n 65 PRO 89 A GLN 90 n 66 GLN 90 A LEU 91 n 67 LEU 91 A VAL 92 n 68 VAL 92 A LEU 93 n 69 LEU 93 A VAL 94 n 70 VAL 94 A ASN 95 n 71 ASN 95 A GLY 96 n 72 GLY 96 A GLU 97 n 73 GLU 97 A ASP 98 n 74 ASP 98 A LEU 99 n 75 LEU 99 A THR 100 n 76 THR 100 A ARG 101 n 77 ARG 101 A TYR 102 n 78 TYR 102 A ARG 103 n 79 ARG 103 A GLU 104 n 80 GLU 104 A MET 105 n 81 MET 105 A SER 106 n 82 SER 106 A TYR 107 n 83 TYR 107 A LYS 108 n 84 LYS 108 A VAL 109 n 85 VAL 109 A THR 110 n 86 THR 110 A GLU 111 n 87 GLU 111 A LEU 112 n 88 LEU 112 A LEU 113 n 89 LEU 113 A GLU 114 n 90 GLU 114 A GLU 115 n 91 GLU 115 A PHE 116 n 92 PHE 116 A SER 117 n 93 SER 117 A PRO 118 n 94 PRO 118 A VAL 119 n 95 VAL 119 A VAL 120 n 96 VAL 120 A GLU 121 n 97 GLU 121 A ARG 122 n 98 ARG 122 A LEU 123 n 99 LEU 123 A GLY 124 n 100 GLY 124 A PHE 125 n 101 PHE 125 A ASP 126 n 102 ASP 126 A GLU 127 n 103 GLU 127 A ASN 128 n 104 ASN 128 A PHE 129 n 105 PHE 129 A VAL 130 n 106 VAL 130 A ASP 131 n 107 ASP 131 A LEU 132 n 108 LEU 132 A THR 133 n 109 THR 133 A GLU 134 n 110 GLU 134 A MET 135 n 111 MET 135 A VAL 136 n 112 VAL 136 A GLU 137 n 113 GLU 137 A LYS 138 n 114 LYS 138 A ARG 139 n 115 ARG 139 A LEU 140 n 116 LEU 140 A GLN 141 n 117 GLN 141 A GLN 142 n 118 GLN 142 A LEU 143 n 119 LEU 143 A GLN 144 n 120 GLN 144 A SER 145 n 121 SER 145 A ASP 146 n 122 ASP 146 A GLU 147 n 123 GLU 147 A LEU 148 n 124 LEU 148 A SER 149 n 125 SER 149 A ALA 150 n 126 ALA 150 A VAL 151 n 127 VAL 151 A THR 152 n 128 THR 152 A VAL 153 n 129 VAL 153 A SER 154 n 130 SER 154 A GLY 155 n 131 GLY 155 A HIS 156 n 132 HIS 156 A VAL 157 n 133 VAL 157 A TYR 158 n 134 TYR 158 A ASN 159 n 135 ASN 159 A ASN 160 n 136 ASN 160 A GLN 161 n 137 GLN 161 A SER 162 n 138 SER 162 A ILE 163 n 139 ILE 163 A ASN 164 n 140 ASN 164 A LEU 165 n 141 LEU 165 A LEU 166 n 142 LEU 166 A ASP 167 n 143 ASP 167 A VAL 168 n 144 VAL 168 A LEU 169 n 145 LEU 169 A HIS 170 n 146 HIS 170 A ILE 171 n 147 ILE 171 A ARG 172 n 148 ARG 172 A LEU 173 n 149 LEU 173 A LEU 174 n 150 LEU 174 A VAL 175 n 151 VAL 175 A GLY 176 n 152 GLY 176 A SER 177 n 153 SER 177 A GLN 178 n 154 GLN 178 A ILE 179 n 155 ILE 179 A ALA 180 n 156 ALA 180 A ALA 181 n 157 ALA 181 A GLU 182 n 158 GLU 182 A MET 183 n 159 MET 183 A ARG 184 n 160 ARG 184 A GLU 185 n 161 GLU 185 A ALA 186 n 162 ALA 186 A MET 187 n 163 MET 187 A TYR 188 n 164 TYR 188 A ASN 189 n 165 ASN 189 A GLN 190 n 166 GLN 190 A LEU 191 n 167 LEU 191 A GLY 192 n 168 GLY 192 A LEU 193 n 169 LEU 193 A THR 194 n 170 THR 194 A GLY 195 n 171 GLY 195 A CYS 196 n 172 CYS 196 A ALA 197 n 173 ALA 197 A GLY 198 n 174 GLY 198 A VAL 199 n 175 VAL 199 A ALA 200 n 176 ALA 200 A SER 201 n 177 SER 201 A ASN 202 n 178 ASN 202 A LYS 203 n 179 LYS 203 A LEU 204 n 180 LEU 204 A LEU 205 n 181 LEU 205 A ALA 206 n 182 ALA 206 A LYS 207 n 183 LYS 207 A LEU 208 n 184 LEU 208 A VAL 209 n 185 VAL 209 A SER 210 n 186 SER 210 A GLY 211 n 187 GLY 211 A VAL 212 n 188 VAL 212 A PHE 213 n 189 PHE 213 A LYS 214 n 190 LYS 214 A PRO 215 n 191 PRO 215 A ASN 216 n 192 ASN 216 A GLN 217 n 193 GLN 217 A GLN 218 n 194 GLN 218 A THR 219 n 195 THR 219 A VAL 220 n 196 VAL 220 A LEU 221 n 197 LEU 221 A LEU 222 n 198 LEU 222 A PRO 223 n 199 PRO 223 A GLU 224 n 200 GLU 224 A SER 225 n 201 SER 225 A CYS 226 n 202 CYS 226 A GLN 227 n 203 GLN 227 A HIS 228 n 204 HIS 228 A LEU 229 n 205 LEU 229 A ILE 230 n 206 ILE 230 A HIS 231 n 207 HIS 231 A SER 232 n 208 SER 232 A LEU 233 n 209 LEU 233 A ASN 234 n 210 ASN 234 A HIS 235 n 211 HIS 235 A ILE 236 n 212 ILE 236 A LYS 237 n 213 LYS 237 A GLU 238 n 214 GLU 238 A ILE 239 n 215 ILE 239 A PRO 240 n 216 PRO 240 A GLY 241 n 217 GLY 241 A ILE 242 n 218 ILE 242 A GLY 243 n 219 GLY 243 A TYR 244 n 220 TYR 244 A LYS 245 n 221 LYS 245 A THR 246 n 222 THR 246 A ALA 247 n 223 ALA 247 A LYS 248 n 224 LYS 248 A CYS 249 n 225 CYS 249 A LEU 250 n 226 LEU 250 A GLU 251 n 227 GLU 251 A ALA 252 n 228 ALA 252 A LEU 253 n 229 LEU 253 A GLY 254 n 230 GLY 254 A ILE 255 n 231 ILE 255 A ASN 256 n 232 ASN 256 A SER 257 n 233 SER 257 A VAL 258 n 234 VAL 258 A ARG 259 n 235 ARG 259 A ASP 260 n 236 ASP 260 A LEU 261 n 237 LEU 261 A GLN 262 n 238 GLN 262 A THR 263 n 239 THR 263 A PHE 264 n 240 PHE 264 A SER 265 n 241 SER 265 A PRO 266 n 242 PRO 266 A LYS 267 n 243 LYS 267 A ILE 268 n 244 ILE 268 A LEU 269 n 245 LEU 269 A GLU 270 n 246 GLU 270 A LYS 271 n 247 LYS 271 A GLU 272 n 248 GLU 272 A LEU 273 n 249 LEU 273 A GLY 274 n 250 GLY 274 A ILE 275 n 251 ILE 275 A SER 276 n 252 SER 276 A VAL 277 n 253 VAL 277 A ALA 278 n 254 ALA 278 A GLN 279 n 255 GLN 279 A ARG 280 n 256 ARG 280 A ILE 281 n 257 ILE 281 A GLN 282 n 258 GLN 282 A LYS 283 n 259 LYS 283 A LEU 284 n 260 LEU 284 A SER 285 n 261 SER 285 A PHE 286 n 262 PHE 286 A GLY 287 n 263 GLY 287 A GLU 288 n 264 GLU 288 A ASP 289 n 265 ASP 289 A ASN 290 n 266 ASN 290 A SER 291 n 267 SER 291 A PRO 292 n 268 PRO 292 A VAL 293 n 269 VAL 293 A ILE 294 n 270 ILE 294 A LEU 295 n 271 LEU 295 A SER 296 n 272 SER 296 A GLY 297 n 273 GLY 297 A PRO 298 n 274 PRO 298 A PRO 299 n 275 PRO 299 A GLN 300 n 276 GLN 300 A SER 301 n 277 SER 301 A PHE 302 n 278 PHE 302 A SER 303 n 279 SER 303 A GLU 304 n 280 GLU 304 A GLU 305 n 281 GLU 305 A ASP 306 n 282 ASP 306 A SER 307 n 283 SER 307 A PHE 308 n 284 PHE 308 A LYS 309 n 285 LYS 309 A LYS 310 n 286 LYS 310 A CYS 311 n 287 CYS 311 A SER 312 n 288 SER 312 A SER 313 n 289 SER 313 A GLU 314 n 290 GLU 314 A VAL 315 n 291 VAL 315 A GLU 316 n 292 GLU 316 A ALA 317 n 293 ALA 317 A LYS 318 n 294 LYS 318 A ASN 319 n 295 ASN 319 A LYS 320 n 296 LYS 320 A ILE 321 n 297 ILE 321 A GLU 322 n 298 GLU 322 A GLU 323 n 299 GLU 323 A LEU 324 n 300 LEU 324 A LEU 325 n 301 LEU 325 A ALA 326 n 302 ALA 326 A SER 327 n 303 SER 327 A LEU 328 n 304 LEU 328 A LEU 329 n 305 LEU 329 A ASN 330 n 306 ASN 330 A ARG 331 n 307 ARG 331 A VAL 332 n 308 VAL 332 A CYS 333 n 309 CYS 333 A GLN 334 n 310 GLN 334 A ASP 335 n 311 ASP 335 A GLY 336 n 312 GLY 336 A ARG 337 n 313 ARG 337 A LYS 338 n 314 LYS 338 A PRO 339 n 315 PRO 339 A HIS 340 n 316 HIS 340 A THR 341 n 317 THR 341 A VAL 342 n 318 VAL 342 A ARG 343 n 319 ARG 343 A LEU 344 n 320 LEU 344 A ILE 345 n 321 ILE 345 A ILE 346 n 322 ILE 346 A ARG 347 n 323 ARG 347 A ARG 348 n 324 ARG 348 A TYR 349 n 325 TYR 349 A SER 350 n 326 SER 350 A SER 351 n 327 SER 351 A GLU 352 n 328 GLU 352 A LYS 353 n 329 LYS 353 A HIS 354 n 330 HIS 354 A TYR 355 n 331 TYR 355 A GLY 356 n 332 GLY 356 A ARG 357 n 333 ARG 357 A GLU 358 n 334 GLU 358 A SER 359 n 335 SER 359 A ARG 360 n 336 ARG 360 A GLN 361 n 337 GLN 361 A CYS 362 n 338 CYS 362 A PRO 363 n 339 PRO 363 A ILE 364 n 340 ILE 364 A PRO 365 n 341 PRO 365 A SER 366 n 342 SER 366 A HIS 367 n 343 HIS 367 A VAL 368 n 344 VAL 368 A ILE 369 n 345 ILE 369 A GLN 370 n 346 GLN 370 A n 347 371 A n 348 372 A n 349 373 A n 350 374 A n 351 375 A n 352 376 A n 353 377 A n 354 378 A VAL 379 n 355 VAL 379 A MET 380 n 356 MET 380 A THR 381 n 357 THR 381 A PRO 382 n 358 PRO 382 A MET 383 n 359 MET 383 A VAL 384 n 360 VAL 384 A ASP 385 n 361 ASP 385 A ILE 386 n 362 ILE 386 A LEU 387 n 363 LEU 387 A MET 388 n 364 MET 388 A LYS 389 n 365 LYS 389 A LEU 390 n 366 LEU 390 A PHE 391 n 367 PHE 391 A ARG 392 n 368 ARG 392 A ASN 393 n 369 ASN 393 A MET 394 n 370 MET 394 A n 371 395 A n 372 396 A n 373 397 A n 374 398 A n 375 399 A n 376 400 A n 377 401 A n 378 402 A n 379 403 A THR 404 n 380 THR 404 A LEU 405 n 381 LEU 405 A LEU 406 n 382 LEU 406 A SER 407 n 383 SER 407 A VAL 408 n 384 VAL 408 A CYS 409 n 385 CYS 409 A PHE 410 n 386 PHE 410 A CYS 411 n 387 CYS 411 A ASN 412 n 388 ASN 412 A LEU 413 n 389 LEU 413 A LYS 414 n 390 LYS 414 A 0.3588 0.1203 0.2540 0.7846 0.4018 1.9011 0.0647 0.0336 0.0059 -0.0206 -0.1188 0.0138 0.0705 0.2142 0.0541 0.3898 0.0179 -0.0122 0.3830 -0.0092 0.3096 refined 16.3438 16.5375 6.0781 X-RAY DIFFRACTION 2.8093 -1.2040 -0.8828 2.9484 0.4688 6.0581 0.0788 0.0137 -0.3578 0.3055 -0.3291 0.6859 0.2718 -0.2846 0.2503 0.3131 -0.1281 0.1040 0.3429 -0.1294 0.4542 refined -4.9600 16.1357 23.6401 X-RAY DIFFRACTION 2.9279 -0.9832 2.7703 2.9952 0.3580 4.0367 -0.4652 -0.0778 0.6493 -0.1231 -0.1596 -0.0863 -0.3962 -0.1495 0.6248 0.3795 0.0245 -0.1688 0.2717 -0.0415 0.4888 refined 0.4889 35.4704 -3.2889 X-RAY DIFFRACTION 6.9815 1.2328 -1.8301 8.4853 0.1166 3.7757 1.0479 -0.3472 0.6124 1.3248 -0.6834 0.9378 -0.1738 0.2586 -0.3645 0.6301 -0.2922 0.2805 0.2298 -0.2637 0.3142 refined 7.2756 41.0709 32.8688 X-RAY DIFFRACTION 1.4275 -0.6439 -0.4337 2.1999 -0.3448 0.5682 0.0301 -0.0049 0.4890 0.0384 -0.0755 0.5017 -0.1463 0.1403 0.0454 0.4032 -0.0784 0.0173 0.3192 -0.0711 0.5119 refined 4.5685 36.7789 17.2676 X-RAY DIFFRACTION A 26 C 2 A 37 C 13 X-RAY DIFFRACTION 1 A 99 C 75 A 224 C 200 X-RAY DIFFRACTION 1 A 38 C 14 A 98 C 74 X-RAY DIFFRACTION 2 A 225 C 201 A 287 C 263 X-RAY DIFFRACTION 3 A 298 C 274 A 414 C 390 X-RAY DIFFRACTION 4 T 839 A 1 T 847 A 9 X-RAY DIFFRACTION 5 P 867 B 1 P 873 B 7 X-RAY DIFFRACTION 5 A 875 F 1 A 875 F 1 X-RAY DIFFRACTION 5 A 871 E 1 A 872 D 1 X-RAY DIFFRACTION 5 author_defined_assembly 6 hexameric A ASP 34 C OD2 ASP 10 1_555 A MG 871 E MG MG 1_555 A LEU 35 C O LEU 11 1_555 88.3 A ASP 34 C OD2 ASP 10 1_555 A MG 871 E MG MG 1_555 A ASP 126 C OD1 ASP 102 1_555 89.6 A LEU 35 C O LEU 11 1_555 A MG 871 E MG MG 1_555 A ASP 126 C OD1 ASP 102 1_555 86.8 A ASP 34 C OD2 ASP 10 1_555 A MG 871 E MG MG 1_555 A DCP 875 F O1G DCP 1_555 95.1 A LEU 35 C O LEU 11 1_555 A MG 871 E MG MG 1_555 A DCP 875 F O1G DCP 1_555 95.1 A ASP 126 C OD1 ASP 102 1_555 A MG 871 E MG MG 1_555 A DCP 875 F O1G DCP 1_555 175.0 A ASP 34 C OD2 ASP 10 1_555 A MG 871 E MG MG 1_555 A DCP 875 F O1A DCP 1_555 110.2 A LEU 35 C O LEU 11 1_555 A MG 871 E MG MG 1_555 A DCP 875 F O1A DCP 1_555 160.3 A ASP 126 C OD1 ASP 102 1_555 A MG 871 E MG MG 1_555 A DCP 875 F O1A DCP 1_555 86.6 A DCP 875 F O1G DCP 1_555 A MG 871 E MG MG 1_555 A DCP 875 F O1A DCP 1_555 90.0 A ASP 34 C OD2 ASP 10 1_555 A MG 871 E MG MG 1_555 A DCP 875 F O2B DCP 1_555 176.2 A LEU 35 C O LEU 11 1_555 A MG 871 E MG MG 1_555 A DCP 875 F O2B DCP 1_555 88.3 A ASP 126 C OD1 ASP 102 1_555 A MG 871 E MG MG 1_555 A DCP 875 F O2B DCP 1_555 88.7 A DCP 875 F O1G DCP 1_555 A MG 871 E MG MG 1_555 A DCP 875 F O2B DCP 1_555 86.7 A DCP 875 F O1A DCP 1_555 A MG 871 E MG MG 1_555 A DCP 875 F O2B DCP 1_555 73.0 A ASP 34 C OD1 ASP 10 1_555 A MG 872 D MG MG 1_555 A ASP 126 C OD2 ASP 102 1_555 115.2 A ASP 34 C OD1 ASP 10 1_555 A MG 872 D MG MG 1_555 A GLU 127 C OE2 GLU 103 1_555 88.7 A ASP 126 C OD2 ASP 102 1_555 A MG 872 D MG MG 1_555 A GLU 127 C OE2 GLU 103 1_555 98.1 A ASP 34 C OD1 ASP 10 1_555 A MG 872 D MG MG 1_555 A DCP 875 F O1A DCP 1_555 112.7 A ASP 126 C OD2 ASP 102 1_555 A MG 872 D MG MG 1_555 A DCP 875 F O1A DCP 1_555 73.0 A GLU 127 C OE2 GLU 103 1_555 A MG 872 D MG MG 1_555 A DCP 875 F O1A DCP 1_555 158.6 P DOC 873 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE B DOC 7 DC 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.5000000000 -0.8660254038 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 10_665 -y+1,-x+1,-z+1/6 crystal symmetry operation 49.0570000000 84.9692164669 33.8038333333 A N GLU 121 C N GLU 97 A O PHE 129 C O PHE 105 A O ASN 128 C O ASN 104 A N VAL 33 C N VAL 9 A N ASP 34 C N ASP 10 A O CYS 196 C O CYS 172 A N VAL 199 C N VAL 175 A O THR 219 C O THR 195 A O GLN 218 C O GLN 194 A N HIS 156 C N HIS 132 A O MET 79 C O MET 55 A N VAL 63 C N VAL 39 A O THR 65 C O THR 41 A N VAL 57 C N VAL 33 A N GLY 56 C N GLY 32 A O VAL 92 C O VAL 68 A N PHE 302 C N PHE 278 A O PHE 410 C O PHE 386 A O CYS 409 C O CYS 385 A N ARG 343 C N ARG 319 A N ILE 346 C N ILE 322 A O GLU 358 C O GLU 334 1 A CG ASP 146 C CG ASP 122 1 Y 1 A OD1 ASP 146 C OD1 ASP 122 1 Y 1 A OD2 ASP 146 C OD2 ASP 122 1 Y 1 A CG LYS 245 C CG LYS 221 1 Y 1 A CD LYS 245 C CD LYS 221 1 Y 1 A CE LYS 245 C CE LYS 221 1 Y 1 A NZ LYS 245 C NZ LYS 221 1 Y 1 A CG LYS 271 C CG LYS 247 1 Y 1 A CD LYS 271 C CD LYS 247 1 Y 1 A CE LYS 271 C CE LYS 247 1 Y 1 A NZ LYS 271 C NZ LYS 247 1 Y 1 A CG1 VAL 315 C CG1 VAL 291 1 Y 1 A CG2 VAL 315 C CG2 VAL 291 1 Y 1 A CG GLU 316 C CG GLU 292 1 Y 1 A CD GLU 316 C CD GLU 292 1 Y 1 A OE1 GLU 316 C OE1 GLU 292 1 Y 1 A OE2 GLU 316 C OE2 GLU 292 1 Y 1 A CG LYS 338 C CG LYS 314 1 Y 1 A CD LYS 338 C CD LYS 314 1 Y 1 A CE LYS 338 C CE LYS 314 1 Y 1 A NZ LYS 338 C NZ LYS 314 1 Y 1 A CG TYR 349 C CG TYR 325 1 Y 1 A CD1 TYR 349 C CD1 TYR 325 1 Y 1 A CD2 TYR 349 C CD2 TYR 325 1 Y 1 A CE1 TYR 349 C CE1 TYR 325 1 Y 1 A CE2 TYR 349 C CE2 TYR 325 1 Y 1 A CZ TYR 349 C CZ TYR 325 1 Y 1 A OH TYR 349 C OH TYR 325 1 Y 1 A OG SER 350 C OG SER 326 1 Y 1 A OG SER 351 C OG SER 327 1 Y 1 A CG GLU 352 C CG GLU 328 1 Y 1 A CD GLU 352 C CD GLU 328 1 Y 1 A OE1 GLU 352 C OE1 GLU 328 1 Y 1 A OE2 GLU 352 C OE2 GLU 328 1 Y 1 A CG LYS 353 C CG LYS 329 1 Y 1 A CD LYS 353 C CD LYS 329 1 Y 1 A CE LYS 353 C CE LYS 329 1 Y 1 A NZ LYS 353 C NZ LYS 329 1 Y 1 A CG HIS 354 C CG HIS 330 1 Y 1 A ND1 HIS 354 C ND1 HIS 330 1 Y 1 A CD2 HIS 354 C CD2 HIS 330 1 Y 1 A CE1 HIS 354 C CE1 HIS 330 1 Y 1 A NE2 HIS 354 C NE2 HIS 330 1 Y 1 A CG TYR 355 C CG TYR 331 1 Y 1 A CD1 TYR 355 C CD1 TYR 331 1 Y 1 A CD2 TYR 355 C CD2 TYR 331 1 Y 1 A CE1 TYR 355 C CE1 TYR 331 1 Y 1 A CE2 TYR 355 C CE2 TYR 331 1 Y 1 A CZ TYR 355 C CZ TYR 331 1 Y 1 A OH TYR 355 C OH TYR 331 1 Y 1 A CG HIS 367 C CG HIS 343 1 Y 1 A ND1 HIS 367 C ND1 HIS 343 1 Y 1 A CD2 HIS 367 C CD2 HIS 343 1 Y 1 A CE1 HIS 367 C CE1 HIS 343 1 Y 1 A NE2 HIS 367 C NE2 HIS 343 1 Y 1 A CG1 VAL 379 C CG1 VAL 355 1 Y 1 A CG2 VAL 379 C CG2 VAL 355 1 Y 1 A CG ASP 385 C CG ASP 361 1 Y 1 A OD1 ASP 385 C OD1 ASP 361 1 Y 1 A OD2 ASP 385 C OD2 ASP 361 1 Y 1 A CG1 ILE 386 C CG1 ILE 362 1 Y 1 A CG2 ILE 386 C CG2 ILE 362 1 Y 1 A CD1 ILE 386 C CD1 ILE 362 1 Y 1 A CG LYS 389 C CG LYS 365 1 Y 1 A CD LYS 389 C CD LYS 365 1 Y 1 A CE LYS 389 C CE LYS 365 1 Y 1 A NZ LYS 389 C NZ LYS 365 1 Y 1 A CG LEU 405 C CG LEU 381 1 Y 1 A CD1 LEU 405 C CD1 LEU 381 1 Y 1 A CD2 LEU 405 C CD2 LEU 381 1 Y 1 A LYS 371 C LYS 347 1 Y 1 A LEU 372 C LEU 348 1 Y 1 A GLY 373 C GLY 349 1 Y 1 A THR 374 C THR 350 1 Y 1 A GLY 375 C GLY 351 1 Y 1 A ASN 376 C ASN 352 1 Y 1 A TYR 377 C TYR 353 1 Y 1 A ASP 378 C ASP 354 1 Y 1 A VAL 395 C VAL 371 1 Y 1 A ASN 396 C ASN 372 1 Y 1 A VAL 397 C VAL 373 1 Y 1 A LYS 398 C LYS 374 1 Y 1 A MET 399 C MET 375 1 Y 1 A PRO 400 C PRO 376 1 Y 1 A PHE 401 C PHE 377 1 Y 1 A HIS 402 C HIS 378 1 Y 1 A LEU 403 C LEU 379 1 Y 1 A A OD2 NH1 ASP ARG 335 337 2.12 1 A A ND2 O ASN HOH 290 902 2.15 1 T A OP2 OG DT SER 844 301 2.19 1 A A PHE LYS 213 214 -147.88 1 A A HIS TYR 354 355 -149.94 1 P DC 871 0.070 SIDE CHAIN 1 -4.99 0.40 104.50 99.51 T T T O4' C4' C3' DT DT DT 839 839 839 N 1 9.83 1.20 115.70 125.53 T T T C5' C4' C3' DT DT DT 839 839 839 N 1 8.59 1.40 114.30 122.89 T T T N1 C1' C2' DT DT DT 839 839 839 N 1 11.45 1.20 119.70 131.15 T T T C3' O3' P DT DT DG 839 839 840 Y 1 -6.11 0.90 105.70 99.59 T T T O5' P OP2 DG DG DG 840 840 840 N 1 2.74 0.30 108.30 111.04 T T T O4' C1' N9 DG DG DG 840 840 840 N 1 3.26 0.50 113.10 116.36 T T T N7 C8 N9 DG DG DG 840 840 840 N 1 -3.99 0.40 106.40 102.41 T T T C8 N9 C4 DG DG DG 840 840 840 N 1 2.48 0.40 105.40 107.88 T T T N9 C4 C5 DG DG DG 840 840 840 N 1 -9.88 0.60 119.90 110.02 T T T N1 C6 O6 DG DG DG 840 840 840 N 1 9.34 0.60 128.60 137.94 T T T C5 C6 O6 DG DG DG 840 840 840 N 1 -5.04 0.80 102.40 97.36 T T T C3' C2' C1' DG DG DG 841 841 841 N 1 3.23 0.50 106.80 110.03 T T T O4' C1' C2' DG DG DG 841 841 841 N 1 2.13 0.30 108.30 110.43 T T T O4' C1' N9 DG DG DG 841 841 841 N 1 -6.47 0.60 125.10 118.63 T T T C6 N1 C2 DG DG DG 841 841 841 N 1 5.04 0.50 111.90 116.94 T T T C2 N3 C4 DG DG DG 841 841 841 N 1 5.82 0.50 111.50 117.32 T T T C5 C6 N1 DG DG DG 841 841 841 N 1 4.34 0.70 119.90 124.24 T T T N3 C2 N2 DG DG DG 841 841 841 N 1 4.86 0.60 106.00 110.86 T T T O4' C4' C3' DG DG DG 842 842 842 N 1 16.03 2.00 112.30 128.33 T T T C4' C3' O3' DG DG DG 842 842 842 N 1 -6.26 0.70 102.20 95.94 T T T C4' C3' C2' DG DG DG 842 842 842 N 1 11.10 1.20 102.50 113.60 T T T C3' C2' C1' DG DG DG 842 842 842 N 1 -7.34 0.80 105.90 98.56 T T T O4' C1' C2' DG DG DG 842 842 842 N 1 -14.83 0.70 108.00 93.17 T T T O4' C1' N9 DG DG DG 842 842 842 N 1 -4.45 0.60 125.10 120.65 T T T C6 N1 C2 DG DG DG 842 842 842 N 1 3.53 0.50 111.50 115.03 T T T C5 C6 N1 DG DG DG 842 842 842 N 1 -5.10 0.40 110.80 105.70 T T T C4 C5 N7 DG DG DG 842 842 842 N 1 4.23 0.50 104.30 108.53 T T T C5 N7 C8 DG DG DG 842 842 842 N 1 -2.78 0.40 106.40 103.62 T T T C8 N9 C4 DG DG DG 842 842 842 N 1 4.56 0.40 105.40 109.96 T T T N9 C4 C5 DG DG DG 842 842 842 N 1 4.69 0.60 130.40 135.09 T T T C6 C5 N7 DG DG DG 842 842 842 N 1 -3.84 0.60 119.90 116.06 T T T N1 C6 O6 DG DG DG 842 842 842 N 1 9.76 0.60 106.00 115.76 T T T O4' C4' C3' DG DG DG 843 843 843 N 1 -8.79 1.00 110.10 101.31 T T T C1' O4' C4' DG DG DG 843 843 843 N 1 -12.70 0.70 102.20 89.50 T T T C4' C3' C2' DG DG DG 843 843 843 N 1 -10.03 0.80 105.90 95.87 T T T O4' C1' C2' DG DG DG 843 843 843 N 1 -9.83 0.70 108.00 98.17 T T T O4' C1' N9 DG DG DG 843 843 843 N 1 -3.42 0.40 110.80 107.38 T T T C4 C5 N7 DG DG DG 843 843 843 N 1 4.49 0.50 104.30 108.79 T T T C5 N7 C8 DG DG DG 843 843 843 N 1 -3.13 0.40 106.40 103.27 T T T C8 N9 C4 DG DG DG 843 843 843 N 1 2.93 0.40 105.40 108.33 T T T N9 C4 C5 DG DG DG 843 843 843 N 1 -3.78 0.60 119.90 116.12 T T T N1 C6 O6 DG DG DG 843 843 843 N 1 -10.98 1.80 114.10 103.12 T T T C5' C4' C3' DT DT DT 844 844 844 N 1 -4.67 0.70 108.00 103.33 T T T O4' C1' N1 DT DT DT 844 844 844 N 1 -4.52 0.50 121.30 116.78 T T T C6 N1 C2 DT DT DT 844 844 844 N 1 4.09 0.60 114.60 118.69 T T T N1 C2 N3 DT DT DT 844 844 844 N 1 7.36 0.60 115.20 122.56 T T T N3 C4 C5 DT DT DT 844 844 844 N 1 -11.92 0.60 118.00 106.08 T T T C4 C5 C6 DT DT DT 844 844 844 N 1 8.04 0.60 123.70 131.74 T T T C5 C6 N1 DT DT DT 844 844 844 N 1 -10.59 0.60 119.90 109.31 T T T N3 C4 O4 DT DT DT 844 844 844 N 1 10.43 0.60 119.00 129.43 T T T C4 C5 C7 DT DT DT 844 844 844 N 1 -4.67 0.40 121.90 117.23 T T T N3 C4 C5 DC DC DC 845 845 845 N 1 3.98 0.50 117.40 121.38 T T T C4 C5 C6 DC DC DC 845 845 845 N 1 5.64 0.70 120.20 125.84 T T T C5 C4 N4 DC DC DC 845 845 845 N 1 -11.38 0.70 108.00 96.62 T T T O4' C1' N1 DC DC DC 846 846 846 N 1 4.13 0.50 119.90 124.03 T T T C2 N3 C4 DC DC DC 846 846 846 N 1 -4.77 0.40 121.90 117.13 T T T N3 C4 C5 DC DC DC 846 846 846 N 1 3.82 0.60 106.00 109.82 T T T O4' C4' C3' DT DT DT 847 847 847 N 1 -4.90 0.70 102.20 97.30 T T T C4' C3' C2' DT DT DT 847 847 847 N 1 -4.28 0.60 127.20 122.92 T T T C2 N3 C4 DT DT DT 847 847 847 N 1 5.11 0.60 115.20 120.31 T T T N3 C4 C5 DT DT DT 847 847 847 N 1 -5.10 0.60 118.00 112.90 T T T C4 C5 C6 DT DT DT 847 847 847 N 1 -4.56 0.60 119.90 115.34 T T T N3 C4 O4 DT DT DT 847 847 847 N 1 21.44 2.50 111.00 132.44 P P P O5' C5' C4' DA DA DA 867 867 867 N 1 -7.08 0.40 104.50 97.42 P P P O4' C4' C3' DA DA DA 867 867 867 N 1 7.35 0.70 110.30 117.65 P P P C1' O4' C4' DA DA DA 867 867 867 N 1 10.21 0.30 108.30 118.51 P P P O4' C1' N9 DA DA DA 867 867 867 N 1 3.69 0.60 118.60 122.29 P P P N1 C6 N6 DA DA DA 867 867 867 N 1 -6.29 0.80 123.70 117.41 P P P C5 C6 N6 DA DA DA 867 867 867 N 1 7.52 0.90 116.20 123.72 P P P N1 C2 N2 DG DG DG 868 868 868 N 1 -6.27 0.70 119.90 113.63 P P P N3 C2 N2 DG DG DG 868 868 868 N 1 8.46 0.60 119.90 128.36 P P P N1 C6 O6 DG DG DG 868 868 868 N 1 -7.01 0.60 128.60 121.59 P P P C5 C6 O6 DG DG DG 868 868 868 N 1 -4.08 0.40 104.50 100.42 P P P O4' C4' C3' DG DG DG 869 869 869 N 1 8.13 0.30 108.30 116.43 P P P O4' C1' N9 DG DG DG 869 869 869 N 1 4.62 0.50 111.90 116.52 P P P C2 N3 C4 DG DG DG 869 869 869 N 1 -3.08 0.50 128.60 125.52 P P P N3 C4 C5 DG DG DG 869 869 869 N 1 -10.70 1.20 119.70 109.00 P P P C3' O3' P DG DG DA 869 869 870 Y 1 -8.34 0.90 105.70 97.36 P P P O5' P OP2 DA DA DA 870 870 870 N 1 6.01 0.60 106.00 112.01 P P P O4' C4' C3' DA DA DA 870 870 870 N 1 5.37 0.50 106.80 112.17 P P P O4' C1' C2' DA DA DA 870 870 870 N 1 4.78 0.30 108.30 113.08 P P P O4' C1' N9 DA DA DA 870 870 870 N 1 -5.05 0.60 118.60 113.55 P P P C6 N1 C2 DA DA DA 870 870 870 N 1 6.30 0.50 129.30 135.60 P P P N1 C2 N3 DA DA DA 870 870 870 N 1 -5.80 0.50 110.60 104.80 P P P C2 N3 C4 DA DA DA 870 870 870 N 1 6.61 1.10 110.50 117.11 P P P O3' P OP2 DA DC DC 870 871 871 Y 1 6.88 1.10 110.50 117.38 P P P O3' P OP1 DA DC DC 870 871 871 Y 1 -11.69 1.50 119.60 107.91 P P P OP1 P OP2 DC DC DC 871 871 871 N 1 4.67 0.60 106.00 110.67 P P P O4' C4' C3' DC DC DC 871 871 871 N 1 6.12 0.30 108.30 114.42 P P P O4' C1' N1 DC DC DC 871 871 871 N 1 9.70 0.60 106.00 115.70 P P P O4' C4' C3' DC DC DC 872 872 872 N 1 -9.33 1.00 110.10 100.77 P P P C1' O4' C4' DC DC DC 872 872 872 N 1 -5.75 0.70 102.20 96.45 P P P C4' C3' C2' DC DC DC 872 872 872 N 1 7.43 1.20 102.50 109.93 P P P C3' C2' C1' DC DC DC 872 872 872 N 1 6.81 1.10 110.50 117.31 P P P O3' P OP1 DC DOC DOC 872 873 873 Y 1 3.01 0.50 120.30 123.31 A A A NE CZ NH1 ARG ARG ARG 71 71 71 N 1 -4.23 0.50 120.30 116.07 A A A NE CZ NH1 ARG ARG ARG 103 103 103 N 1 -6.42 0.50 120.30 113.88 A A A NE CZ NH2 ARG ARG ARG 122 122 122 N 1 -11.95 1.60 100.20 88.25 A A A CG SD CE MET MET MET 135 135 135 N 1 -4.81 0.50 120.30 115.49 A A A NE CZ NH1 ARG ARG ARG 172 172 172 N 1 -3.89 0.50 120.30 116.41 A A A NE CZ NH2 ARG ARG ARG 184 184 184 N 1 -11.57 1.50 103.20 91.63 A A A N CD CG PRO PRO PRO 215 215 215 N 1 -13.28 2.20 111.50 98.22 A A A N CA CB VAL VAL VAL 315 315 315 N 1 -3.26 0.50 120.30 117.04 A A A NE CZ NH2 ARG ARG ARG 343 343 343 N 1 23.65 1.80 110.60 134.25 A A A N CA CB TYR TYR TYR 355 355 355 N 1 T T C5' C4' DT DT 839 839 0.061 0.007 1.512 1.573 N 1 T T O3' C3' DT DT 839 839 0.089 0.013 1.435 1.524 N 1 T T C4 C5 DG DG 841 841 -0.045 0.007 1.379 1.334 N 1 T T O3' C3' DG DG 842 842 -0.091 0.006 1.419 1.328 N 1 T T C5 N7 DG DG 842 842 -0.036 0.006 1.388 1.352 N 1 T T C2 N2 DG DG 842 842 0.061 0.010 1.341 1.402 N 1 T T P O5' DG DG 843 843 0.078 0.010 1.593 1.671 N 1 T T C3' C2' DG DG 843 843 -0.050 0.008 1.516 1.466 N 1 T T C2' C1' DG DG 843 843 0.076 0.010 1.519 1.595 N 1 T T O4' C1' DG DG 843 843 -0.098 0.012 1.418 1.320 N 1 T T C5 N7 DG DG 843 843 -0.056 0.006 1.388 1.332 N 1 T T O5' C5' DT DT 844 844 0.097 0.016 1.440 1.537 N 1 T T C2' C1' DT DT 844 844 0.072 0.010 1.519 1.591 N 1 T T O3' C3' DT DT 844 844 -0.095 0.006 1.419 1.324 N 1 T T C1' N1 DT DT 844 844 0.090 0.013 1.488 1.578 N 1 T T N1 C2 DT DT 844 844 -0.048 0.008 1.376 1.328 N 1 T T C4 C5 DT DT 844 844 0.066 0.009 1.445 1.511 N 1 T T C5 C6 DT DT 844 844 0.068 0.007 1.339 1.407 N 1 T T C5 C7 DT DT 844 844 0.104 0.006 1.496 1.600 N 1 T T P O5' DC DC 845 845 0.072 0.010 1.593 1.665 N 1 T T N1 C6 DC DC 845 845 -0.058 0.006 1.367 1.309 N 1 T T N3 C4 DC DC 845 845 -0.043 0.007 1.335 1.292 N 1 T T C4 N4 DC DC 846 846 0.056 0.009 1.335 1.391 N 1 T T C5' C4' DT DT 847 847 0.042 0.007 1.512 1.554 N 1 T T O3' C3' DT DT 847 847 0.136 0.013 1.435 1.571 N 1 T T C5 C7 DT DT 847 847 0.087 0.006 1.496 1.583 N 1 P P C5' C4' DA DA 867 867 0.047 0.007 1.512 1.559 N 1 P P C4 C5 DA DA 867 867 -0.042 0.007 1.383 1.341 N 1 P P P O5' DA DA 870 870 0.060 0.010 1.593 1.653 N 1 P P C2' C1' DA DA 870 870 0.070 0.010 1.519 1.589 N 1 P P C8 N9 DA DA 870 870 -0.053 0.008 1.373 1.320 N 1 P P O3' P DA DC 870 871 0.111 0.012 1.607 1.718 Y 1 P P O4' C1' DC DC 871 871 -0.089 0.012 1.418 1.329 N 1 P P O3' C3' DC DC 871 871 -0.101 0.006 1.419 1.318 N 1 P P C4 N4 DC DC 871 871 -0.056 0.009 1.335 1.279 N 1 P P O4' C4' DC DC 872 872 0.091 0.009 1.449 1.540 N 1 P P O3' C3' DC DC 872 872 -0.121 0.006 1.419 1.298 N 1 A A CB OG SER SER 46 46 -0.087 0.013 1.418 1.331 N 1 A A CZ NH2 ARG ARG 103 103 0.113 0.013 1.326 1.439 N 1 A A CG SD MET MET 105 105 0.200 0.026 1.807 2.007 N 1 A A CB OG SER SER 117 117 0.103 0.013 1.418 1.521 N 1 A A CG CD ARG ARG 122 122 0.185 0.025 1.515 1.700 N 1 A A CD NE ARG ARG 122 122 -0.110 0.017 1.460 1.350 N 1 A A CD OE1 GLU GLU 127 127 0.096 0.011 1.252 1.348 N 1 A A CD OE1 GLU GLU 134 134 0.073 0.011 1.252 1.325 N 1 A A CA CB VAL VAL 151 151 -0.136 0.021 1.543 1.407 N 1 A A CD NE ARG ARG 184 184 -0.132 0.017 1.460 1.328 N 1 A A CG CD GLU GLU 185 185 0.091 0.015 1.515 1.606 N 1 A A CA C LYS LYS 214 214 -0.248 0.026 1.525 1.277 N 1 A A N CA ASN ASN 216 216 0.139 0.020 1.459 1.598 N 1 A A CB CG2 VAL VAL 258 258 -0.136 0.021 1.524 1.388 N 1 A A N CA TYR TYR 355 355 0.138 0.020 1.459 1.597 N 1 T P O3' O5' DT DA 847 867 1.80 1_555 10_665 1 A SER 26 -117.59 -81.19 1 A CYS 37 19.51 61.34 1 A ASP 52 50.86 -4.76 1 A LYS 60 58.03 -127.35 1 A CYS 88 -161.41 85.23 1 A ASP 146 -163.64 -49.89 1 A PRO 215 -61.98 -86.70 1 A HIS 235 -171.19 149.12 1 A LYS 245 -69.83 -71.14 1 A GLU 272 -162.76 -8.81 1 A SER 276 -77.92 -72.90 1 A ASP 289 -170.23 106.10 1 A PHE 308 -168.03 83.60 1 A LYS 310 78.79 -7.00 1 A GLU 314 109.07 33.94 1 A VAL 315 -169.70 -36.18 1 A LYS 318 -143.14 -29.11 1 A ARG 347 174.25 126.43 1 A SER 350 163.85 -76.56 1 A LYS 353 -63.65 5.54 1 A HIS 354 54.26 -25.53 1 A TYR 355 -172.88 124.93 1 A CYS 362 -171.52 130.77 1 A CYS 411 -121.78 -169.63 44.26 0.93000 0.46000 0.00000 0.93000 0.00000 -1.39000 0.924 0.897 0.272 0.228 2.50 50.00 2027 20339 10.000 98.1 9.853 0.223 RANDOM LIKELY RESIDUAL 1 THROUGHOUT 0.000 MOLECULAR REPLACEMENT 0.478 0.301 0.80 0.80 1.40 PDB ENTRY 1T3N MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 2.50 50.00 79 3305 30 322 2874 0.050 0.021 3299 3.190 2.112 4524 7.347 5.000 370 0.208 0.200 516 0.016 0.020 2309 0.302 0.200 1374 0.246 0.200 164 0.337 0.200 19 0.380 0.200 8 1.884 1.500 1860 3.335 2.000 2996 4.468 3.000 1439 6.253 4.500 1528 0.307 0.254 2.56 166 1276 20 2.500 50.000 2ALZ 20339 0.08 1 15.0 9.8 99.0 0.437 2.5 2.59 6.6 1 100 refinement Murshudov, G.N. ccp4@dl.ac.uk Fortran http://www.ccp4.ac.uk/main.html REFMAC program 5.1.24 data extraction PDB sw-help@rcsb.rutgers.edu May. 30, 2005 C++ http://pdb.rutgers.edu/software/ PDB_EXTRACT package 1.700 data reduction HKL-2000 data scaling SCALEPACK phasing AMoRE Ternary Complex of hPoli with DNA and dCTP 1 N N 2 N N 3 N N 4 N N 4 N N 5 N N 6 N N 6 N N 6 N N A CYS 37 C CYS 13 HELX_P A ASN 47 C ASN 23 1 1 11 A PRO 48 C PRO 24 HELX_P A LYS 51 C LYS 27 5 2 4 A ASN 67 C ASN 43 HELX_P A LEU 73 C LEU 49 1 3 7 A VAL 81 C VAL 57 HELX_P A LYS 87 C LYS 63 1 4 7 A LEU 99 C LEU 75 HELX_P A SER 117 C SER 93 1 5 19 A LEU 132 C LEU 108 HELX_P A LEU 143 C LEU 119 1 6 12 A ASP 146 C ASP 122 HELX_P A ALA 150 C ALA 126 5 7 5 A ASP 167 C ASP 143 HELX_P A GLY 192 C GLY 168 1 8 26 A ASN 202 C ASN 178 HELX_P A GLY 211 C GLY 187 1 9 10 A LEU 222 C LEU 198 HELX_P A GLU 224 C GLU 200 5 10 3 A SER 225 C SER 201 HELX_P A SER 232 C SER 208 1 11 8 A HIS 235 C HIS 211 HELX_P A ILE 239 C ILE 215 5 12 5 A GLY 243 C GLY 219 HELX_P A LEU 253 C LEU 229 1 13 11 A SER 257 C SER 233 HELX_P A PHE 264 C PHE 240 1 14 8 A SER 265 C SER 241 HELX_P A PHE 286 C PHE 262 1 15 22 A LYS 318 C LYS 294 HELX_P A GLY 336 C GLY 312 1 16 19 A PRO 365 C PRO 341 HELX_P A GLN 370 C GLN 346 1 17 6 A MET 380 C MET 356 HELX_P A MET 394 C MET 370 1 18 15 covale 1.559 both P DC 872 B O3' DC 6 1_555 P DOC 873 B P DOC 7 1_555 metalc 2.228 A ASP 34 C OD2 ASP 10 1_555 A MG 871 E MG MG 1_555 metalc 2.937 A ASP 34 C OD1 ASP 10 1_555 A MG 872 D MG MG 1_555 metalc 2.095 A LEU 35 C O LEU 11 1_555 A MG 871 E MG MG 1_555 metalc 2.082 A ASP 126 C OD1 ASP 102 1_555 A MG 871 E MG MG 1_555 metalc 3.073 A ASP 126 C OD2 ASP 102 1_555 A MG 872 D MG MG 1_555 metalc 2.280 A GLU 127 C OE2 GLU 103 1_555 A MG 872 D MG MG 1_555 metalc 2.332 A MG 871 E MG MG 1_555 A DCP 875 F O1G DCP 1_555 metalc 2.313 A MG 871 E MG MG 1_555 A DCP 875 F O1A DCP 1_555 metalc 2.199 A MG 871 E MG MG 1_555 A DCP 875 F O2B DCP 1_555 metalc 2.363 A MG 872 D MG MG 1_555 A DCP 875 F O1A DCP 1_555 hydrog WATSON-CRICK T DG 841 A N1 DG 3 1_555 P DOC 873 B N3 DOC 7 1_555 hydrog WATSON-CRICK T DG 841 A N2 DG 3 1_555 P DOC 873 B O2 DOC 7 1_555 hydrog WATSON-CRICK T DG 841 A O6 DG 3 1_555 P DOC 873 B N4 DOC 7 1_555 hydrog WATSON-CRICK T DG 842 A N1 DG 4 1_555 P DC 872 B N3 DC 6 1_555 hydrog WATSON-CRICK T DG 842 A N2 DG 4 1_555 P DC 872 B O2 DC 6 1_555 hydrog WATSON-CRICK T DG 842 A O6 DG 4 1_555 P DC 872 B N4 DC 6 1_555 hydrog WATSON-CRICK T DG 843 A N1 DG 5 1_555 P DC 871 B N3 DC 5 1_555 hydrog WATSON-CRICK T DG 843 A N2 DG 5 1_555 P DC 871 B O2 DC 5 1_555 hydrog WATSON-CRICK T DG 843 A O6 DG 5 1_555 P DC 871 B N4 DC 5 1_555 hydrog WATSON-CRICK T DT 844 A N3 DT 6 1_555 P DA 870 B N1 DA 4 1_555 hydrog WATSON-CRICK T DT 844 A O4 DT 6 1_555 P DA 870 B N6 DA 4 1_555 hydrog WATSON-CRICK T DC 845 A N3 DC 7 1_555 P DG 869 B N1 DG 3 1_555 hydrog WATSON-CRICK T DC 845 A N4 DC 7 1_555 P DG 869 B O6 DG 3 1_555 hydrog WATSON-CRICK T DC 845 A O2 DC 7 1_555 P DG 869 B N2 DG 3 1_555 hydrog WATSON-CRICK T DC 846 A N3 DC 8 1_555 P DG 868 B N1 DG 2 1_555 hydrog WATSON-CRICK T DC 846 A N4 DC 8 1_555 P DG 868 B O6 DG 2 1_555 hydrog WATSON-CRICK T DC 846 A O2 DC 8 1_555 P DG 868 B N2 DG 2 1_555 hydrog WATSON-CRICK T DT 847 A N3 DT 9 1_555 P DA 867 B N1 DA 1 1_555 hydrog WATSON-CRICK T DT 847 A O4 DT 9 1_555 P DA 867 B N6 DA 1 1_555 Transferase/DNA right handed, DNA polymerase, ternary complex, template G. incoming dCTP, Hoogsteen base pair, Transferase-DNA COMPLEX POLI_HUMAN UNP 3 25 Q9UNA4 ASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGEDLTRYRE MSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMR EAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTF SPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTVRL IIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLK 2ALZ PDB 1 2ALZ 2ALZ PDB 2 2ALZ 25 414 2ALZ 25 414 Q9UNA4 A 1 1 390 839 847 2ALZ 839 847 2ALZ T 2 1 9 867 873 2ALZ 867 873 2ALZ P 3 1 7 6 4 4 anti-parallel anti-parallel anti-parallel parallel parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel A VAL 120 C VAL 96 A LEU 123 C LEU 99 A GLU 127 C GLU 103 A ASP 131 C ASP 107 A ILE 30 C ILE 6 A LEU 35 C LEU 11 A GLY 195 C GLY 171 A ALA 200 C ALA 176 A GLN 218 C GLN 194 A VAL 220 C VAL 196 A HIS 156 C HIS 132 A VAL 157 C VAL 133 A MET 79 C MET 55 A ASN 80 C ASN 56 A LEU 62 C LEU 38 A CYS 66 C CYS 42 A LEU 55 C LEU 31 A GLN 59 C GLN 35 A VAL 92 C VAL 68 A ASN 95 C ASN 71 A SER 301 C SER 277 A SER 307 C SER 283 A LEU 405 C LEU 381 A LYS 414 C LYS 390 A LYS 338 C LYS 314 A ILE 346 C ILE 322 A GLU 358 C GLU 334 A PRO 363 C PRO 339 BINDING SITE FOR RESIDUE MG A 872 A MG 872 Software 6 BINDING SITE FOR RESIDUE MG A 871 A MG 871 Software 5 BINDING SITE FOR RESIDUE DCP A 875 A DCP 875 Software 21 A ASP 34 C ASP 10 6 1_555 A ASP 126 C ASP 102 6 1_555 A GLU 127 C GLU 103 6 1_555 A MG 871 E MG 6 1_555 A DCP 875 F DCP 6 1_555 P DOC 873 B DOC 7 6 1_555 A ASP 34 C ASP 10 5 1_555 A LEU 35 C LEU 11 5 1_555 A ASP 126 C ASP 102 5 1_555 A MG 872 D MG 5 1_555 A DCP 875 F DCP 5 1_555 A ASP 34 C ASP 10 21 1_555 A LEU 35 C LEU 11 21 1_555 A ASP 36 C ASP 12 21 1_555 A CYS 37 C CYS 13 21 1_555 A PHE 38 C PHE 14 21 1_555 A TYR 39 C TYR 15 21 1_555 A VAL 64 C VAL 40 21 1_555 A THR 65 C THR 41 21 1_555 A TYR 68 C TYR 44 21 1_555 A ARG 71 C ARG 47 21 1_555 A LYS 77 C LYS 53 21 1_555 A ASP 126 C ASP 102 21 1_555 A LYS 214 C LYS 190 21 1_555 A MG 871 E MG 21 1_555 A MG 872 D MG 21 1_555 A HOH 908 I HOH 21 1_555 A HOH 923 I HOH 21 1_555 P DOC 873 B DOC 7 21 1_555 T DG 840 A DG 2 21 1_555 T DG 841 A DG 3 21 1_555 T HOH 903 G HOH 21 1_555 179 P 65 2 2