0.00627 0.00000 0.00073 0.00000 0.02640 0.00000 0.00000 0.00000 0.02613 0.00000 0.00000 0.00000 Malinina, L. Teplova, M. Musunuru, K. Teplov, A. Darnell, J.C. 0000-0002-2487-9713 Burley, S.K. Darnell, R.B. Patel, D.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 96.64 90.00 159.453 37.885 38.523 C9 H12 Br N2 O9 P 403.077 n 5-BROMO-URIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking K 1 39.098 POTASSIUM ION non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N P N 2 N O N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 R C N 12 N O N 13 R C N 14 N N N 15 N C N 16 N O N 17 N N N 18 N C N 19 N O N 20 N C N 21 N C N 22 N BR N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N O N 36 N P N 37 N O N 38 N O N 39 N O N 40 N C N 41 R C N 42 N O N 43 S C N 44 N O N 45 R C N 46 N O N 47 R C Y 48 N N Y 49 N C Y 50 N N Y 51 N C Y 52 N C N 53 N N Y 54 N N Y 55 N C Y 56 N N Y 57 N C N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N N N 73 S C N 74 N C N 75 N O N 76 N C N 77 N O N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N N N 86 S C N 87 N C N 88 N O N 89 N C N 90 N C N 91 N C N 92 N N N 93 N C N 94 N N N 95 N N N 96 N O N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N N N 113 S C N 114 N C N 115 N O N 116 N C N 117 N C N 118 N O N 119 N N N 120 N O N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N N N 130 S C N 131 N C N 132 N O N 133 N C N 134 N C N 135 N O N 136 N O N 137 N O N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N O N 146 N P N 147 N O N 148 N O N 149 N O N 150 N C N 151 R C N 152 N O N 153 S C N 154 N O N 155 R C N 156 N O N 157 R C N 158 N N N 159 N C N 160 N O N 161 N N N 162 N C N 163 N N N 164 N C N 165 N C N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N N N 181 R C N 182 N C N 183 N O N 184 N C N 185 N S N 186 N O N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N O N 195 N P N 196 N O N 197 N O N 198 N O N 199 N C N 200 R C N 201 N O N 202 S C N 203 N O N 204 R C N 205 N O N 206 R C Y 207 N N Y 208 N C Y 209 N N Y 210 N C N 211 N C N 212 N O N 213 N N N 214 N C N 215 N N N 216 N N Y 217 N C N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N N N 233 S C N 234 N C N 235 N O N 236 N C N 237 N C N 238 N C N 239 N O N 240 N N N 241 N O N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N N N 253 S C N 254 N C N 255 N O N 256 N C N 257 N C N 258 N C N 259 N O N 260 N O N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N N N 272 N C N 273 N C N 274 N O N 275 N O N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N N N 282 S C N 283 N C N 284 N O N 285 N C Y 286 N C Y 287 N N Y 288 N C Y 289 N C Y 290 N N N 291 N O N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N O N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 S C N 310 N C N 311 N C N 312 N C N 313 N O N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N K N 328 N N N 329 S C N 330 N C N 331 N O N 332 N C N 333 N C N 334 N C N 335 N C N 336 N O N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N N N 351 S C N 352 N C N 353 N O N 354 N C N 355 N C N 356 N C N 357 N C N 358 N N N 359 N O N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N N N 376 S C N 377 N C N 378 N O N 379 N C N 380 N C N 381 N S N 382 N C N 383 N O N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N MG N 396 N N N 397 S C N 398 N C N 399 N O N 400 N O N 401 N C N 402 N C N 403 N SE N 404 N C N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N N N 417 S C N 418 N C N 419 N O N 420 N C Y 421 N C Y 422 N C Y 423 N C Y 424 N C Y 425 N C Y 426 N C N 427 N O N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N N N 440 S C N 441 N C N 442 N O N 443 N C N 444 N C N 445 N C N 446 N O N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N N N 457 S C N 458 N C N 459 N O N 460 N C N 461 N O N 462 N O N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N N N 471 S C N 472 N C N 473 N O N 474 R C N 475 N O N 476 N C N 477 N O N 478 N H N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N N N 488 S C N 489 N C N 490 N O N 491 N C Y 492 N C Y 493 N C Y 494 N C Y 495 N N Y 496 N C Y 497 N C Y 498 N C Y 499 N C Y 500 N C N 501 N O N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N N N 515 S C N 516 N C N 517 N O N 518 N C Y 519 N C Y 520 N C Y 521 N C Y 522 N C Y 523 N C Y 524 N C N 525 N O N 526 N O N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 534 N H N 535 N H N 536 N H N 537 N H N 538 N O N 539 N P N 540 N O N 541 N O N 542 N O N 543 N C N 544 R C N 545 N O N 546 S C N 547 N O N 548 R C N 549 N O N 550 R C N 551 N N N 552 N C N 553 N O N 554 N N N 555 N C N 556 N O N 557 N C N 558 N C N 559 N H N 560 N H N 561 N H N 562 N H N 563 N H N 564 N H N 565 N H N 566 N H N 567 N H N 568 N H N 569 N H N 570 N H N 571 N H N 572 N N N 573 S C N 574 N C N 575 N O N 576 N C N 577 N C N 578 N C N 579 N O N 580 N H N 581 N H N 582 N H N 583 N H N 584 N H N 585 N H N 586 N H N 587 N H N 588 N H N 589 N H N 590 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N doub N 28 N sing N 29 N sing N 30 N sing N 31 N doub N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N doub N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing Y 60 N sing Y 61 N sing Y 62 N doub N 63 N sing Y 64 N sing Y 65 N sing Y 66 N doub N 67 N sing Y 68 N doub N 69 N sing N 70 N sing Y 71 N sing Y 72 N doub N 73 N sing Y 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N doub N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N doub N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N doub N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N doub N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N doub N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N doub N 171 N sing N 172 N doub N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N doub N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing Y 217 N sing Y 218 N sing Y 219 N doub N 220 N sing Y 221 N sing N 222 N sing Y 223 N doub N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N doub N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N doub N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N doub N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N doub N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N doub N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N doub N 286 N sing N 287 N sing N 288 N sing N 289 N sing Y 290 N sing Y 291 N doub Y 292 N doub N 293 N sing Y 294 N sing N 295 N sing Y 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N doub N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N doub N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N doub N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N doub N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N doub N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N doub N 413 N sing N 414 N sing N 415 N sing N 416 N sing Y 417 N doub Y 418 N sing Y 419 N sing N 420 N sing Y 421 N doub N 422 N sing Y 423 N doub N 424 N sing Y 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N doub N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N doub N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N doub N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N doub N 482 N sing N 483 N sing N 484 N sing N 485 N sing Y 486 N doub Y 487 N sing Y 488 N sing N 489 N sing Y 490 N doub Y 491 N sing Y 492 N sing N 493 N sing Y 494 N sing Y 495 N doub N 496 N sing Y 497 N doub N 498 N sing Y 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N doub N 510 N sing N 511 N sing N 512 N sing N 513 N sing Y 514 N doub Y 515 N sing Y 516 N sing N 517 N sing Y 518 N doub N 519 N sing Y 520 N doub N 521 N sing Y 522 N sing N 523 N sing N 524 N sing N 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N doub N 530 N sing N 531 N sing N 532 N sing N 533 N sing N 534 N sing N 535 N sing N 536 N sing N 537 N sing N 538 N sing N 539 N sing N 540 N sing N 541 N sing N 542 N sing N 543 N sing N 544 N sing N 545 N sing N 546 N sing N 547 N sing N 548 N sing N 549 N sing N 550 N sing N 551 N sing N 552 N sing N 553 N doub N 554 N sing N 555 N sing N 556 N sing N 557 N doub N 558 N sing N 559 N doub N 560 N sing N 561 N sing N 562 N sing N 563 N sing N 564 N sing N 565 N sing N 566 N sing N 567 N sing N 568 N doub N 569 N sing N 570 N sing N 571 N sing N 572 N sing N 573 N sing N 574 N sing N 575 N sing N 576 N sing N 577 N sing N 578 N sing N 579 N sing UK Structure STRUE6 2005 0969-2126 19 930 944 10.1016/j.str.2011.05.002 21742260 Protein-RNA and protein-protein recognition by dual KH1/2 domains of the neuronal splicing factor Nova-1. 2011 0000-0002-2487-9713 10.2210/pdb2anr/pdb pdb_00002anr 100 1 CCD 2003-02-07 ADSC QUANTUM 4 SINGLE WAVELENGTH M x-ray 1 0.919826 1.0 X4A NSLS 0.919826 SYNCHROTRON NSLS BEAMLINE X4A 8090.747 5'-R(*CP*(5BU)P*CP*GP*CP*GP*GP*AP*UP*CP*AP*GP*UP*CP*AP*CP*CP*CP*AP*AP*GP*CP*GP*AP*G)-3' 1 syn polymer 19282.838 RNA-binding protein Nova-1 KH1/KH2 domains E218N 1 man polymer 39.098 POTASSIUM ION 1 syn non-polymer 24.305 MAGNESIUM ION 2 syn non-polymer 18.015 water 106 nat water Neuro-oncological ventral antigen 1,Ventral neuron-specific protein 1 no yes C(5BU)CGCGGAUCAGUCACCCAAGCGAG CUCGCGGAUCAGUCACCCAAGCGAG B polyribonucleotide no yes PLGSQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIRE (MSE)PQNVAKTEPVSILQPQTTVNPDRANQVKIIVPNSTAGLIIGKGGATVKAI(MSE)EQSGAWVQLSQKPDGINLQN RVVTVSGEPEQNRKAVELIIQKIQEDPQ PLGSQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMP QNVAKTEPVSILQPQTTVNPDRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQNRVVTVSGEPE QNRKAVELIIQKIQEDPQ A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Mouse Homo Escherichia sample 1 178 Nova1 10090 Mus musculus 562 Escherichia coli Biological sequence 1 2.40 48.43 VAPOR DIFFUSION 5.6 PEG 4000, isopropanol, potassium cloride, magnesium cloride, pH 5.6, VAPOR DIFFUSION, temperature 293K 293 PEG 4000 1 isopropanol 1 potassium chloride 1 magnesium chloride 1 H2O 1 PEG 4000 2 potassium chloride 2 magnesium chloride 2 -5.998 1 19 B 201 B 225 -8.856 B_C201:G225_B 1 -6.004 -0.616 0.407 -0.103 5.385 1 20 B 202 B 224 -5.907 B_5BU202:A224_B 2 -6.928 -0.460 0.237 -0.275 11.735 1 19 B 203 B 223 0.375 B_C203:G223_B 3 -14.575 0.282 0.006 -0.248 -0.724 1 19 B 204 B 222 2.444 B_G204:C222_B 4 -8.690 -0.198 -0.133 -0.200 -1.385 1 19 B 205 B 221 2.244 B_C205:G221_B 5 -9.098 0.512 -0.005 -0.026 -0.170 10 11 B 206 B 220 -2.934 B_G206:A220_B 6 -10.511 6.810 0.247 -4.110 19.288 9 11 B 207 B 219 8.829 B_G207:A219_B 7 12.060 6.354 0.928 -4.676 -43.732 1 B 208 B 218 -40.412 B_A208:C218_B 8 -17.087 -4.098 -2.168 -1.162 3.224 32.211 B B 201 202 -8.062 B B 225 224 3.030 -4.451 -0.278 -1.551 BB_C2015BU202:A224G225_BB 1 -3.488 6.318 31.724 -2.032 -0.098 2.917 34.343 B B 202 203 4.813 B B 224 223 3.061 2.839 0.298 -1.589 BB_5BU202C203:G223A224_BB 2 -0.741 1.256 34.221 -3.098 -0.611 2.828 33.116 B B 203 204 16.279 B B 223 222 3.425 9.143 -0.408 -1.837 BB_C203G204:C222G223_BB 3 -3.892 6.930 31.629 -4.732 0.073 3.159 30.300 B B 204 205 5.026 B B 222 221 3.328 2.622 -0.413 -2.126 BB_G204C205:G221C222_BB 4 -2.357 4.520 30.099 -4.593 0.317 3.258 59.762 B B 205 206 7.424 B B 221 220 3.390 7.379 -0.450 -0.776 BB_C205G206:A220G221_BB 5 2.995 -3.013 59.278 -1.155 0.605 2.969 32.713 B B 206 207 10.232 B B 220 219 3.092 5.712 0.885 -1.036 BB_G206G207:A219A220_BB 6 5.162 -9.248 31.818 -2.768 -0.732 -0.705 11.303 B B 207 208 46.148 B B 219 218 4.701 7.630 -3.679 -1.987 BB_G207A208:C218A219_BB 7 5.767 -34.875 6.030 -19.013 25.425 software audit_author citation_author pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site database_2 struct_ref_seq_dif chem_comp_atom chem_comp_bond pdbx_initial_refinement_model chem_comp_atom chem_comp_bond entity entity_name_com entity_src_gen pdbx_entity_src_syn pdbx_struct_mod_residue struct_ref struct_ref_seq struct_ref_seq_dif repository Initial release Version format compliance Advisory Version format compliance Database references Refinement description Database references Derived calculations Structure summary Database references Data collection Refinement description Data collection Database references Derived calculations Source and taxonomy Structure summary 1 0 2006-10-24 1 1 2008-04-30 1 2 2011-07-13 1 3 2011-11-02 1 4 2017-10-11 1 5 2021-02-03 1 6 2021-10-20 1 7 2023-08-23 1 8 2023-11-15 1 9 2023-12-20 _software.classification _software.contact_author _software.contact_author_email _software.date _software.language _software.location _software.name _software.type _software.version _audit_author.identifier_ORCID _citation_author.identifier_ORCID _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _chem_comp_atom.atom_id _chem_comp_bond.atom_id_2 _entity.pdbx_description _entity.pdbx_mutation _entity_name_com.name _entity_src_gen.gene_src_common_name _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_seq_type _struct_ref.db_code _struct_ref.db_name _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_seq_one_letter_code _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end _struct_ref_seq.pdbx_db_accession _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end Crystal structure (1) of Nova-1 KH1/KH2 tandem with 25nt RNA hairpin RCSB Y RCSB 2005-08-11 REL REL K POTASSIUM ION MG MAGNESIUM ION HOH water sample 1 25 2ANN PDB ENTRY 2ANN PDB experimental model K 301 3 K K 301 B MG 302 4 MG MG 302 B MG 306 4 MG MG 306 B HOH 303 5 HOH HOH 303 B HOH 304 5 HOH HOH 304 B HOH 307 5 HOH HOH 307 B HOH 308 5 HOH HOH 308 B HOH 309 5 HOH HOH 309 B HOH 310 5 HOH HOH 310 B HOH 311 5 HOH HOH 311 B HOH 312 5 HOH HOH 312 B HOH 313 5 HOH HOH 313 B HOH 314 5 HOH HOH 314 B HOH 315 5 HOH HOH 315 B HOH 317 5 HOH HOH 317 B HOH 318 5 HOH HOH 318 B HOH 319 5 HOH HOH 319 B HOH 320 5 HOH HOH 320 B HOH 321 5 HOH HOH 321 B HOH 322 5 HOH HOH 322 B HOH 323 5 HOH HOH 323 B HOH 324 5 HOH HOH 324 B HOH 325 5 HOH HOH 325 B HOH 326 5 HOH HOH 326 B HOH 327 5 HOH HOH 327 B HOH 328 5 HOH HOH 328 B HOH 329 5 HOH HOH 329 B HOH 330 5 HOH HOH 330 B HOH 331 5 HOH HOH 331 B HOH 332 5 HOH HOH 332 B HOH 333 5 HOH HOH 333 B HOH 334 5 HOH HOH 334 B HOH 335 5 HOH HOH 335 B HOH 336 5 HOH HOH 336 B HOH 338 5 HOH HOH 338 B HOH 339 5 HOH HOH 339 B HOH 340 5 HOH HOH 340 B HOH 341 5 HOH HOH 341 B HOH 342 5 HOH HOH 342 B HOH 343 5 HOH HOH 343 B HOH 344 5 HOH HOH 344 B HOH 347 5 HOH HOH 347 B HOH 348 5 HOH HOH 348 B HOH 349 5 HOH HOH 349 B HOH 350 5 HOH HOH 350 B HOH 351 5 HOH HOH 351 B HOH 352 5 HOH HOH 352 B HOH 354 5 HOH HOH 354 B HOH 355 5 HOH HOH 355 B HOH 409 5 HOH HOH 409 B HOH 415 5 HOH HOH 415 B HOH 450 5 HOH HOH 450 B HOH 457 5 HOH HOH 457 B HOH 346 5 HOH HOH 346 A HOH 353 5 HOH HOH 353 A HOH 356 5 HOH HOH 356 A HOH 401 5 HOH HOH 401 A HOH 402 5 HOH HOH 402 A HOH 403 5 HOH HOH 403 A HOH 404 5 HOH HOH 404 A HOH 405 5 HOH HOH 405 A HOH 406 5 HOH HOH 406 A HOH 407 5 HOH HOH 407 A HOH 408 5 HOH HOH 408 A HOH 410 5 HOH HOH 410 A HOH 411 5 HOH HOH 411 A HOH 412 5 HOH HOH 412 A HOH 413 5 HOH HOH 413 A HOH 414 5 HOH HOH 414 A HOH 416 5 HOH HOH 416 A HOH 417 5 HOH HOH 417 A HOH 418 5 HOH HOH 418 A HOH 419 5 HOH HOH 419 A HOH 420 5 HOH HOH 420 A HOH 421 5 HOH HOH 421 A HOH 422 5 HOH HOH 422 A HOH 423 5 HOH HOH 423 A HOH 424 5 HOH HOH 424 A HOH 425 5 HOH HOH 425 A HOH 426 5 HOH HOH 426 A HOH 427 5 HOH HOH 427 A HOH 428 5 HOH HOH 428 A HOH 429 5 HOH HOH 429 A HOH 430 5 HOH HOH 430 A HOH 431 5 HOH HOH 431 A HOH 432 5 HOH HOH 432 A HOH 433 5 HOH HOH 433 A HOH 434 5 HOH HOH 434 A HOH 435 5 HOH HOH 435 A HOH 436 5 HOH HOH 436 A HOH 437 5 HOH HOH 437 A HOH 438 5 HOH HOH 438 A HOH 439 5 HOH HOH 439 A HOH 440 5 HOH HOH 440 A HOH 441 5 HOH HOH 441 A HOH 442 5 HOH HOH 442 A HOH 443 5 HOH HOH 443 A HOH 444 5 HOH HOH 444 A HOH 445 5 HOH HOH 445 A HOH 446 5 HOH HOH 446 A HOH 447 5 HOH HOH 447 A HOH 448 5 HOH HOH 448 A HOH 449 5 HOH HOH 449 A HOH 451 5 HOH HOH 451 A HOH 452 5 HOH HOH 452 A HOH 453 5 HOH HOH 453 A HOH 454 5 HOH HOH 454 A HOH 455 5 HOH HOH 455 A HOH 456 5 HOH HOH 456 A C 201 n 1 C 201 B 5BU 202 n 2 5BU 202 B C 203 n 3 C 203 B G 204 n 4 G 204 B C 205 n 5 C 205 B G 206 n 6 G 206 B G 207 n 7 G 207 B A 208 n 8 A 208 B U 209 n 9 U 209 B C 210 n 10 C 210 B A 211 n 11 A 211 B G 212 n 12 G 212 B U 213 n 13 U 213 B C 214 n 14 C 214 B A 215 n 15 A 215 B C 216 n 16 C 216 B C 217 n 17 C 217 B C 218 n 18 C 218 B A 219 n 19 A 219 B A 220 n 20 A 220 B G 221 n 21 G 221 B C 222 n 22 C 222 B G 223 n 23 G 223 B A 224 n 24 A 224 B G 225 n 25 G 225 B n 1 1 A n 2 2 A GLY 3 n 3 GLY 3 A SER 4 n 4 SER 4 A GLN 5 n 5 GLN 5 A TYR 6 n 6 TYR 6 A PHE 7 n 7 PHE 7 A LEU 8 n 8 LEU 8 A LYS 9 n 9 LYS 9 A VAL 10 n 10 VAL 10 A LEU 11 n 11 LEU 11 A ILE 12 n 12 ILE 12 A PRO 13 n 13 PRO 13 A SER 14 n 14 SER 14 A TYR 15 n 15 TYR 15 A ALA 16 n 16 ALA 16 A ALA 17 n 17 ALA 17 A GLY 18 n 18 GLY 18 A SER 19 n 19 SER 19 A ILE 20 n 20 ILE 20 A ILE 21 n 21 ILE 21 A GLY 22 n 22 GLY 22 A LYS 23 n 23 LYS 23 A GLY 24 n 24 GLY 24 A GLY 25 n 25 GLY 25 A GLN 26 n 26 GLN 26 A THR 27 n 27 THR 27 A ILE 28 n 28 ILE 28 A VAL 29 n 29 VAL 29 A GLN 30 n 30 GLN 30 A LEU 31 n 31 LEU 31 A GLN 32 n 32 GLN 32 A LYS 33 n 33 LYS 33 A GLU 34 n 34 GLU 34 A THR 35 n 35 THR 35 A GLY 36 n 36 GLY 36 A ALA 37 n 37 ALA 37 A THR 38 n 38 THR 38 A ILE 39 n 39 ILE 39 A LYS 40 n 40 LYS 40 A LEU 41 n 41 LEU 41 A SER 42 n 42 SER 42 A LYS 43 n 43 LYS 43 A SER 44 n 44 SER 44 A LYS 45 n 45 LYS 45 A ASP 46 n 46 ASP 46 A PHE 47 n 47 PHE 47 A TYR 48 n 48 TYR 48 A PRO 49 n 49 PRO 49 A GLY 50 n 50 GLY 50 A THR 51 n 51 THR 51 A THR 52 n 52 THR 52 A GLU 53 n 53 GLU 53 A ARG 54 n 54 ARG 54 A VAL 55 n 55 VAL 55 A CYS 56 n 56 CYS 56 A LEU 57 n 57 LEU 57 A ILE 58 n 58 ILE 58 A GLN 59 n 59 GLN 59 A GLY 60 n 60 GLY 60 A THR 61 n 61 THR 61 A ILE 62 n 62 ILE 62 A GLU 63 n 63 GLU 63 A ALA 64 n 64 ALA 64 A LEU 65 n 65 LEU 65 A ASN 66 n 66 ASN 66 A ALA 67 n 67 ALA 67 A VAL 68 n 68 VAL 68 A HIS 69 n 69 HIS 69 A GLY 70 n 70 GLY 70 A PHE 71 n 71 PHE 71 A ILE 72 n 72 ILE 72 A ALA 73 n 73 ALA 73 A GLU 74 n 74 GLU 74 A LYS 75 n 75 LYS 75 A ILE 76 n 76 ILE 76 A ARG 77 n 77 ARG 77 A GLU 78 n 78 GLU 78 A MSE 79 n 79 MSE 79 A PRO 80 n 80 PRO 80 A GLN 81 n 81 GLN 81 A ASN 82 n 82 ASN 82 A n 83 83 A n 84 84 A n 85 85 A n 86 86 A n 87 87 A n 88 88 A n 89 89 A n 90 90 A n 91 91 A n 92 92 A n 93 93 A n 94 94 A n 95 95 A n 96 96 A n 97 97 A n 98 98 A n 99 99 A PRO 100 n 100 PRO 100 A ASP 101 n 101 ASP 101 A ARG 102 n 102 ARG 102 A ALA 103 n 103 ALA 103 A ASN 104 n 104 ASN 104 A GLN 105 n 105 GLN 105 A VAL 106 n 106 VAL 106 A LYS 107 n 107 LYS 107 A ILE 108 n 108 ILE 108 A ILE 109 n 109 ILE 109 A VAL 110 n 110 VAL 110 A PRO 111 n 111 PRO 111 A ASN 112 n 112 ASN 112 A SER 113 n 113 SER 113 A THR 114 n 114 THR 114 A ALA 115 n 115 ALA 115 A GLY 116 n 116 GLY 116 A LEU 117 n 117 LEU 117 A ILE 118 n 118 ILE 118 A ILE 119 n 119 ILE 119 A GLY 120 n 120 GLY 120 A LYS 121 n 121 LYS 121 A GLY 122 n 122 GLY 122 A GLY 123 n 123 GLY 123 A ALA 124 n 124 ALA 124 A THR 125 n 125 THR 125 A VAL 126 n 126 VAL 126 A LYS 127 n 127 LYS 127 A ALA 128 n 128 ALA 128 A ILE 129 n 129 ILE 129 A MSE 130 n 130 MSE 130 A GLU 131 n 131 GLU 131 A GLN 132 n 132 GLN 132 A SER 133 n 133 SER 133 A GLY 134 n 134 GLY 134 A ALA 135 n 135 ALA 135 A TRP 136 n 136 TRP 136 A VAL 137 n 137 VAL 137 A GLN 138 n 138 GLN 138 A LEU 139 n 139 LEU 139 A SER 140 n 140 SER 140 A GLN 141 n 141 GLN 141 A LYS 142 n 142 LYS 142 A PRO 143 n 143 PRO 143 A n 144 144 A n 145 145 A n 146 146 A n 147 147 A LEU 148 n 148 LEU 148 A GLN 149 n 149 GLN 149 A ASN 150 n 150 ASN 150 A ARG 151 n 151 ARG 151 A VAL 152 n 152 VAL 152 A VAL 153 n 153 VAL 153 A THR 154 n 154 THR 154 A VAL 155 n 155 VAL 155 A SER 156 n 156 SER 156 A GLY 157 n 157 GLY 157 A GLU 158 n 158 GLU 158 A PRO 159 n 159 PRO 159 A GLU 160 n 160 GLU 160 A GLN 161 n 161 GLN 161 A ASN 162 n 162 ASN 162 A ARG 163 n 163 ARG 163 A LYS 164 n 164 LYS 164 A ALA 165 n 165 ALA 165 A VAL 166 n 166 VAL 166 A GLU 167 n 167 GLU 167 A LEU 168 n 168 LEU 168 A ILE 169 n 169 ILE 169 A ILE 170 n 170 ILE 170 A GLN 171 n 171 GLN 171 A LYS 172 n 172 LYS 172 A ILE 173 n 173 ILE 173 A GLN 174 n 174 GLN 174 A GLU 175 n 175 GLU 175 A ASP 176 n 176 ASP 176 A PRO 177 n 177 PRO 177 A GLN 178 n 178 GLN 178 A 3.7787 1.0571 1.3332 2.7356 0.1923 2.3635 -0.0263 0.0314 -0.1331 0.6712 -0.0459 -0.4716 0.0107 0.0039 0.0722 0.1949 0.0523 -0.0789 0.0778 -0.0104 0.2368 refined 63.5814 4.8748 10.8711 X-RAY DIFFRACTION 1.2181 0.3749 1.2297 2.7282 0.6884 2.1422 0.1339 0.2452 0.0350 0.0746 -0.0422 -0.1659 -0.0263 -0.4289 -0.0917 0.0928 0.0576 0.1082 0.3052 0.0056 0.1404 refined 48.8347 -16.8254 -1.6941 X-RAY DIFFRACTION A 3 B 3 A 178 B 178 X-RAY DIFFRACTION 1 ALL B 201 A 1 B 225 A 25 X-RAY DIFFRACTION 2 ALL author_defined_assembly 2 dimeric B G 206 A O6 G 6 1_555 B K 301 C K K 1_555 B G 207 A N1 G 7 1_555 55.5 B G 206 A O6 G 6 1_555 B K 301 C K K 1_555 B G 207 A O6 G 7 1_555 82.1 B G 207 A N1 G 7 1_555 B K 301 C K K 1_555 B G 207 A O6 G 7 1_555 38.2 B G 206 A O6 G 6 1_555 B K 301 C K K 1_555 B MG 302 D MG MG 1_555 114.3 B G 207 A N1 G 7 1_555 B K 301 C K K 1_555 B MG 302 D MG MG 1_555 81.7 B G 207 A O6 G 7 1_555 B K 301 C K K 1_555 B MG 302 D MG MG 1_555 43.5 B G 206 A O6 G 6 1_555 B K 301 C K K 1_555 B HOH 304 F O HOH 1_555 86.7 B G 207 A N1 G 7 1_555 B K 301 C K K 1_555 B HOH 304 F O HOH 1_555 141.3 B G 207 A O6 G 7 1_555 B K 301 C K K 1_555 B HOH 304 F O HOH 1_555 139.9 B MG 302 D MG MG 1_555 B K 301 C K K 1_555 B HOH 304 F O HOH 1_555 110.9 B G 206 A O6 G 6 1_555 B K 301 C K K 1_555 B MG 306 E MG MG 1_555 35.7 B G 207 A N1 G 7 1_555 B K 301 C K K 1_555 B MG 306 E MG MG 1_555 72.9 B G 207 A O6 G 7 1_555 B K 301 C K K 1_555 B MG 306 E MG MG 1_555 109.4 B MG 302 D MG MG 1_555 B K 301 C K K 1_555 B MG 306 E MG MG 1_555 149.1 B HOH 304 F O HOH 1_555 B K 301 C K K 1_555 B MG 306 E MG MG 1_555 80.7 B G 206 A O6 G 6 1_555 B K 301 C K K 1_555 B HOH 321 F O HOH 1_555 91.5 B G 207 A N1 G 7 1_555 B K 301 C K K 1_555 B HOH 321 F O HOH 1_555 100.1 B G 207 A O6 G 7 1_555 B K 301 C K K 1_555 B HOH 321 F O HOH 1_555 71.8 B MG 302 D MG MG 1_555 B K 301 C K K 1_555 B HOH 321 F O HOH 1_555 46.1 B HOH 304 F O HOH 1_555 B K 301 C K K 1_555 B HOH 321 F O HOH 1_555 70.1 B MG 306 E MG MG 1_555 B K 301 C K K 1_555 B HOH 321 F O HOH 1_555 121.2 B G 206 A O6 G 6 1_555 B K 301 C K K 1_555 B HOH 322 F O HOH 1_555 94.2 B G 207 A N1 G 7 1_555 B K 301 C K K 1_555 B HOH 322 F O HOH 1_555 53.3 B G 207 A O6 G 7 1_555 B K 301 C K K 1_555 B HOH 322 F O HOH 1_555 69.7 B MG 302 D MG MG 1_555 B K 301 C K K 1_555 B HOH 322 F O HOH 1_555 96.2 B HOH 304 F O HOH 1_555 B K 301 C K K 1_555 B HOH 322 F O HOH 1_555 149.9 B MG 306 E MG MG 1_555 B K 301 C K K 1_555 B HOH 322 F O HOH 1_555 82.6 B HOH 321 F O HOH 1_555 B K 301 C K K 1_555 B HOH 322 F O HOH 1_555 139.8 B G 206 A O6 G 6 1_555 B K 301 C K K 1_555 B HOH 332 F O HOH 1_555 72.5 B G 207 A N1 G 7 1_555 B K 301 C K K 1_555 B HOH 332 F O HOH 1_555 99.1 B G 207 A O6 G 7 1_555 B K 301 C K K 1_555 B HOH 332 F O HOH 1_555 136.8 B MG 302 D MG MG 1_555 B K 301 C K K 1_555 B HOH 332 F O HOH 1_555 171.5 B HOH 304 F O HOH 1_555 B K 301 C K K 1_555 B HOH 332 F O HOH 1_555 73.8 B MG 306 E MG MG 1_555 B K 301 C K K 1_555 B HOH 332 F O HOH 1_555 37.0 B HOH 321 F O HOH 1_555 B K 301 C K K 1_555 B HOH 332 F O HOH 1_555 141.2 B HOH 322 F O HOH 1_555 B K 301 C K K 1_555 B HOH 332 F O HOH 1_555 77.8 B G 206 A O6 G 6 1_555 B K 301 C K K 1_555 B HOH 334 F O HOH 1_555 173.8 B G 207 A N1 G 7 1_555 B K 301 C K K 1_555 B HOH 334 F O HOH 1_555 120.6 B G 207 A O6 G 7 1_555 B K 301 C K K 1_555 B HOH 334 F O HOH 1_555 92.2 B MG 302 D MG MG 1_555 B K 301 C K K 1_555 B HOH 334 F O HOH 1_555 59.6 B HOH 304 F O HOH 1_555 B K 301 C K K 1_555 B HOH 334 F O HOH 1_555 96.3 B MG 306 E MG MG 1_555 B K 301 C K K 1_555 B HOH 334 F O HOH 1_555 150.1 B HOH 321 F O HOH 1_555 B K 301 C K K 1_555 B HOH 334 F O HOH 1_555 84.5 B HOH 322 F O HOH 1_555 B K 301 C K K 1_555 B HOH 334 F O HOH 1_555 85.9 B HOH 332 F O HOH 1_555 B K 301 C K K 1_555 B HOH 334 F O HOH 1_555 113.5 B G 206 A O6 G 6 1_555 B MG 306 E MG MG 1_555 B HOH 323 F O HOH 1_555 102.2 B G 206 A O6 G 6 1_555 B MG 306 E MG MG 1_555 B HOH 332 F O HOH 1_555 89.6 B HOH 323 F O HOH 1_555 B MG 306 E MG MG 1_555 B HOH 332 F O HOH 1_555 167.6 B G 206 A O6 G 6 1_555 B MG 306 E MG MG 1_555 B HOH 333 F O HOH 1_555 95.9 B HOH 323 F O HOH 1_555 B MG 306 E MG MG 1_555 B HOH 333 F O HOH 1_555 87.0 B HOH 332 F O HOH 1_555 B MG 306 E MG MG 1_555 B HOH 333 F O HOH 1_555 87.9 B G 207 A O6 G 7 1_555 B MG 302 D MG MG 1_555 B HOH 303 F O HOH 1_555 99.7 B G 207 A O6 G 7 1_555 B MG 302 D MG MG 1_555 B HOH 321 F O HOH 1_555 88.5 B HOH 303 F O HOH 1_555 B MG 302 D MG MG 1_555 B HOH 321 F O HOH 1_555 92.1 B G 207 A O6 G 7 1_555 B MG 302 D MG MG 1_555 B HOH 324 F O HOH 1_555 162.1 B HOH 303 F O HOH 1_555 B MG 302 D MG MG 1_555 B HOH 324 F O HOH 1_555 97.2 B HOH 321 F O HOH 1_555 B MG 302 D MG MG 1_555 B HOH 324 F O HOH 1_555 96.6 B G 207 A O6 G 7 1_555 B MG 302 D MG MG 1_555 B HOH 334 F O HOH 1_555 90.0 B HOH 303 F O HOH 1_555 B MG 302 D MG MG 1_555 B HOH 334 F O HOH 1_555 169.4 B HOH 321 F O HOH 1_555 B MG 302 D MG MG 1_555 B HOH 334 F O HOH 1_555 84.1 B HOH 324 F O HOH 1_555 B MG 302 D MG MG 1_555 B HOH 334 F O HOH 1_555 73.5 A MSE 79 modified residue B MSE 79 MET A MSE 130 modified residue B MSE 130 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LYS 40 B N LYS 40 A O LEU 57 B O LEU 57 A O GLY 60 B O GLY 60 A N TYR 6 B N TYR 6 A N LYS 9 B N LYS 9 A O ILE 109 B O ILE 109 A N ILE 108 B N ILE 108 A O VAL 153 B O VAL 153 A O SER 156 B O SER 156 A N TRP 136 B N TRP 136 1 A PRO 1 B PRO 1 1 Y 1 A LEU 2 B LEU 2 1 Y 1 A VAL 83 B VAL 83 1 Y 1 A ALA 84 B ALA 84 1 Y 1 A LYS 85 B LYS 85 1 Y 1 A THR 86 B THR 86 1 Y 1 A GLU 87 B GLU 87 1 Y 1 A PRO 88 B PRO 88 1 Y 1 A VAL 89 B VAL 89 1 Y 1 A SER 90 B SER 90 1 Y 1 A ILE 91 B ILE 91 1 Y 1 A LEU 92 B LEU 92 1 Y 1 A GLN 93 B GLN 93 1 Y 1 A PRO 94 B PRO 94 1 Y 1 A GLN 95 B GLN 95 1 Y 1 A THR 96 B THR 96 1 Y 1 A THR 97 B THR 97 1 Y 1 A VAL 98 B VAL 98 1 Y 1 A ASN 99 B ASN 99 1 Y 1 A ASP 144 B ASP 144 1 Y 1 A GLY 145 B GLY 145 1 Y 1 A ILE 146 B ILE 146 1 Y 1 A ASN 147 B ASN 147 1 Y 1 A A MSE PRO 79 80 -138.69 1 -15.14 1.90 104.00 88.86 B B B O3' P O5' C 5BU 5BU 201 202 202 Y 1 5.91 0.70 108.50 114.41 B B B O4' C1' N9 G G G 207 207 207 N 1 5.53 0.80 101.50 107.03 B B B C3' C2' C1' G G G 212 212 212 N 1 A MSE 79 -137.63 -31.99 1 A PRO 80 -59.93 70.06 1 A GLN 141 -64.12 -87.29 1 A LYS 142 -174.83 85.78 1 A GLN 149 -97.89 33.23 1 A ASP 176 -175.84 127.13 24.996 1.720 0.000 -1.850 -0.380 0.000 -1.760 0.948 0.927 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.268 0.227 0.23 0.23 1.940 20.000 830 16805 16202 5.100 94.220 6.103 0.169 RANDOM LIKELY RESIDUAL 1 THROUGHOUT 0.00 MOLECULAR REPLACEMENT 0.218 0.186 0.800 0.800 1.400 PDB ENTRY 2ANN MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 1.940 20.000 106 1817 3 531 1177 0.013 0.021 1796 1.682 2.030 2535 7.170 5.000 152 0.110 0.200 290 0.007 0.020 1121 0.211 0.200 806 0.160 0.200 86 0.262 0.200 3 0.172 0.200 30 0.222 0.200 5 0.636 1.500 765 1.084 2.000 1238 1.699 3.000 1029 2.233 4.500 1297 0.409 0.344 1.990 61 1045 20 1.94 39.6 2ANR 16720 0.0 0.0 0.114 0.988 1 6.55 92.500 0.464 1.94 2.01 1303 0.728 1 89.6 72.400 data reduction Zbyszek Otwinowski zbyszek@mix.swmed.edu http://www.lnls.br/infra/linhasluz/denzo-hkl.htm DENZO package data scaling Zbyszek Otwinowski zbyszek@mix.swmed.edu http://www.lnls.br/infra/linhasluz/denzo-hkl.htm SCALEPACK package refinement Murshudov, G.N. ccp4@dl.ac.uk Fortran http://www.ccp4.ac.uk/main.html REFMAC program data extraction PDB sw-help@rcsb.rutgers.edu May. 30, 2005 C++ http://pdb.rutgers.edu/software/ PDB_EXTRACT package 1.700 data reduction HKL-2000 phasing AMoRE Crystal structure (II) of Nova-1 KH1/KH2 domain tandem with 25nt RNA hairpin 1 N N 2 N N 3 N N 4 N N 4 N N 5 N N 5 N N A SER 14 B SER 14 HELX_P A GLY 22 B GLY 22 1 1 9 A GLY 25 B GLY 25 HELX_P A GLY 36 B GLY 36 1 2 12 A THR 61 B THR 61 HELX_P A ARG 77 B ARG 77 1 3 17 A PRO 100 B PRO 100 HELX_P A ALA 103 B ALA 103 5 4 4 A ASN 112 B ASN 112 HELX_P A GLY 120 B GLY 120 1 5 9 A GLY 123 B GLY 123 HELX_P A SER 133 B SER 133 1 6 11 A GLU 158 B GLU 158 HELX_P A GLU 175 B GLU 175 1 7 18 covale 1.608 both B C 201 A O3' C 1 1_555 B 5BU 202 A P 5BU 2 1_555 covale 1.598 both B 5BU 202 A O3' 5BU 2 1_555 B C 203 A P C 3 1_555 covale 1.330 both A GLU 78 B C GLU 78 1_555 A MSE 79 B N MSE 79 1_555 covale 1.336 both A MSE 79 B C MSE 79 1_555 A PRO 80 B N PRO 80 1_555 covale 1.334 both A ILE 129 B C ILE 129 1_555 A MSE 130 B N MSE 130 1_555 covale 1.325 both A MSE 130 B C MSE 130 1_555 A GLU 131 B N GLU 131 1_555 metalc 2.598 B G 206 A O6 G 6 1_555 B K 301 C K K 1_555 metalc 2.203 B G 206 A O6 G 6 1_555 B MG 306 E MG MG 1_555 metalc 3.654 B G 207 A N1 G 7 1_555 B K 301 C K K 1_555 metalc 2.589 B G 207 A O6 G 7 1_555 B K 301 C K K 1_555 metalc 2.181 B G 207 A O6 G 7 1_555 B MG 302 D MG MG 1_555 metalc 3.138 B K 301 C K K 1_555 B MG 302 D MG MG 1_555 metalc 3.226 B K 301 C K K 1_555 B HOH 304 F O HOH 1_555 metalc 3.708 B K 301 C K K 1_555 B MG 306 E MG MG 1_555 metalc 2.790 B K 301 C K K 1_555 B HOH 321 F O HOH 1_555 metalc 2.834 B K 301 C K K 1_555 B HOH 322 F O HOH 1_555 metalc 2.701 B K 301 C K K 1_555 B HOH 332 F O HOH 1_555 metalc 2.344 B K 301 C K K 1_555 B HOH 334 F O HOH 1_555 metalc 2.098 B MG 302 D MG MG 1_555 B HOH 303 F O HOH 1_555 metalc 2.345 B MG 302 D MG MG 1_555 B HOH 321 F O HOH 1_555 metalc 3.112 B MG 302 D MG MG 1_555 B HOH 324 F O HOH 1_555 metalc 2.809 B MG 302 D MG MG 1_555 B HOH 334 F O HOH 1_555 metalc 2.349 B MG 306 E MG MG 1_555 B HOH 323 F O HOH 1_555 metalc 2.246 B MG 306 E MG MG 1_555 B HOH 332 F O HOH 1_555 metalc 2.277 B MG 306 E MG MG 1_555 B HOH 333 F O HOH 1_555 hydrog WATSON-CRICK B C 201 A N3 C 1 1_555 B G 225 A N1 G 25 1_555 hydrog WATSON-CRICK B C 201 A N4 C 1 1_555 B G 225 A O6 G 25 1_555 hydrog WATSON-CRICK B C 201 A O2 C 1 1_555 B G 225 A N2 G 25 1_555 hydrog WATSON-CRICK B 5BU 202 A N3 5BU 2 1_555 B A 224 A N1 A 24 1_555 hydrog WATSON-CRICK B 5BU 202 A O4 5BU 2 1_555 B A 224 A N6 A 24 1_555 hydrog WATSON-CRICK B C 203 A N3 C 3 1_555 B G 223 A N1 G 23 1_555 hydrog WATSON-CRICK B C 203 A N4 C 3 1_555 B G 223 A O6 G 23 1_555 hydrog WATSON-CRICK B C 203 A O2 C 3 1_555 B G 223 A N2 G 23 1_555 hydrog WATSON-CRICK B G 204 A N1 G 4 1_555 B C 222 A N3 C 22 1_555 hydrog WATSON-CRICK B G 204 A N2 G 4 1_555 B C 222 A O2 C 22 1_555 hydrog WATSON-CRICK B G 204 A O6 G 4 1_555 B C 222 A N4 C 22 1_555 hydrog WATSON-CRICK B C 205 A N3 C 5 1_555 B G 221 A N1 G 21 1_555 hydrog WATSON-CRICK B C 205 A N4 C 5 1_555 B G 221 A O6 G 21 1_555 hydrog WATSON-CRICK B C 205 A O2 C 5 1_555 B G 221 A N2 G 21 1_555 hydrog TYPE_11_PAIR B G 206 A N2 G 6 1_555 B A 220 A N7 A 20 1_555 hydrog TYPE_11_PAIR B G 206 A N3 G 6 1_555 B A 220 A N6 A 20 1_555 hydrog TYPE_11_PAIR B G 207 A N2 G 7 1_555 B A 219 A N7 A 19 1_555 hydrog TYPE_11_PAIR B G 207 A N3 G 7 1_555 B A 219 A N6 A 19 1_555 hydrog A-C MISPAIR B A 208 A N6 A 8 1_555 B C 218 A O2 C 18 1_555 RNA-BINDING PROTEIN/RNA Protein-RNA complex, KH domain, Hairpin, RNA-BINDING PROTEIN-RNA COMPLEX 2ANR PDB 1 1 2ANR NOVA1_MOUSE UNP 2 0 Q9JKN6 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVA KTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLS QKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQ 201 225 2ANR 201 225 2ANR B 1 1 25 49 246 2ANR 5 178 Q9JKN6 A 2 5 178 2 expression tag PRO 1 2ANR A Q9JKN6 UNP 1 2 expression tag LEU 2 2ANR A Q9JKN6 UNP 2 2 expression tag GLY 3 2ANR A Q9JKN6 UNP 3 2 expression tag SER 4 2ANR A Q9JKN6 UNP 4 2 ARG deletion 2ANR A Q9JKN6 UNP 146 2 ILE deletion 2ANR A Q9JKN6 UNP 147 2 LYS deletion 2ANR A Q9JKN6 UNP 148 2 GLN deletion 2ANR A Q9JKN6 UNP 149 2 THR deletion 2ANR A Q9JKN6 UNP 150 2 LEU deletion 2ANR A Q9JKN6 UNP 151 2 PRO deletion 2ANR A Q9JKN6 UNP 152 2 SER deletion 2ANR A Q9JKN6 UNP 153 2 SER deletion 2ANR A Q9JKN6 UNP 154 2 PRO deletion 2ANR A Q9JKN6 UNP 155 2 THR deletion 2ANR A Q9JKN6 UNP 156 2 THR deletion 2ANR A Q9JKN6 UNP 157 2 THR deletion 2ANR A Q9JKN6 UNP 158 2 LYS deletion 2ANR A Q9JKN6 UNP 159 2 SER deletion 2ANR A Q9JKN6 UNP 160 2 SER deletion 2ANR A Q9JKN6 UNP 161 2 PRO deletion 2ANR A Q9JKN6 UNP 162 2 SER deletion 2ANR A Q9JKN6 UNP 163 2 ASP deletion 2ANR A Q9JKN6 UNP 164 2 PRO deletion 2ANR A Q9JKN6 UNP 165 2 MET deletion 2ANR A Q9JKN6 UNP 166 2 THR deletion 2ANR A Q9JKN6 UNP 167 2 THR deletion 2ANR A Q9JKN6 UNP 168 2 SER deletion 2ANR A Q9JKN6 UNP 169 2 GLU engineered mutation ASN 150 2ANR A Q9JKN6 UNP 218 150 6 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A THR 38 B THR 38 A LEU 41 B LEU 41 A GLU 53 B GLU 53 A GLY 60 B GLY 60 A TYR 6 B TYR 6 A PRO 13 B PRO 13 A GLN 105 B GLN 105 A PRO 111 B PRO 111 A ASN 150 B ASN 150 A SER 156 B SER 156 A TRP 136 B TRP 136 A LEU 139 B LEU 139 BINDING SITE FOR RESIDUE K B 301 B K 301 Software 7 BINDING SITE FOR RESIDUE MG B 302 B MG 302 Software 5 BINDING SITE FOR RESIDUE MG B 306 B MG 306 Software 4 B G 206 A G 6 7 1_555 B G 207 A G 7 7 1_555 B MG 302 D MG 7 1_555 B HOH 321 F HOH 7 1_555 B HOH 322 F HOH 7 1_555 B HOH 332 F HOH 7 1_555 B HOH 334 F HOH 7 1_555 B G 207 A G 7 5 1_555 B K 301 C K 5 1_555 B HOH 303 F HOH 5 1_555 B HOH 321 F HOH 5 1_555 B HOH 334 F HOH 5 1_555 B G 206 A G 6 4 1_555 B HOH 323 F HOH 4 1_555 B HOH 332 F HOH 4 1_555 B HOH 333 F HOH 4 1_555 5 C 1 2 1