0.011008
0.000000
0.000000
0.000000
0.011008
0.000000
0.000000
0.000000
0.018990
0.00000
0.00000
0.00000
Zhang, R.
Zhou, M.
Moy, S.
Collart, F.
Joachimiak, A.
Midwest Center for Structural Genomics (MCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
90.839
90.839
52.659
C10 H22 O6
238.278
PENTAETHYLENE GLYCOL
PEG400
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
O
N
2
N
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
C
N
7
N
O
N
8
N
C
N
9
N
C
N
10
N
O
N
11
N
C
N
12
N
C
N
13
N
O
N
14
N
C
N
15
N
C
N
16
N
O
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
H
N
22
N
H
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
N
N
40
S
C
N
41
N
C
N
42
N
O
N
43
N
C
N
44
N
O
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
N
N
53
S
C
N
54
N
C
N
55
N
O
N
56
N
C
N
57
N
C
N
58
N
C
N
59
N
N
N
60
N
C
N
61
N
N
N
62
N
N
N
63
N
O
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
N
N
80
S
C
N
81
N
C
N
82
N
O
N
83
N
C
N
84
N
C
N
85
N
O
N
86
N
N
N
87
N
O
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
N
N
97
S
C
N
98
N
C
N
99
N
O
N
100
N
C
N
101
N
C
N
102
N
O
N
103
N
O
N
104
N
O
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
N
N
113
R
C
N
114
N
C
N
115
N
O
N
116
N
C
N
117
N
S
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
N
N
127
S
C
N
128
N
C
N
129
N
O
N
130
N
C
N
131
N
C
N
132
N
C
N
133
N
O
N
134
N
N
N
135
N
O
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
N
N
147
S
C
N
148
N
C
N
149
N
O
N
150
N
C
N
151
N
C
N
152
N
C
N
153
N
O
N
154
N
O
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
N
N
166
N
C
N
167
N
C
N
168
N
O
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
N
C
Y
180
N
C
Y
181
N
N
Y
182
N
C
Y
183
N
C
Y
184
N
N
N
185
N
O
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
O
N
197
N
H
N
198
N
H
N
199
N
N
N
200
S
C
N
201
N
C
N
202
N
O
N
203
S
C
N
204
N
C
N
205
N
C
N
206
N
C
N
207
N
O
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
N
N
222
S
C
N
223
N
C
N
224
N
O
N
225
N
C
N
226
N
C
N
227
N
C
N
228
N
C
N
229
N
O
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
N
N
244
S
C
N
245
N
C
N
246
N
O
N
247
N
C
N
248
N
C
N
249
N
C
N
250
N
C
N
251
N
N
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
N
N
269
S
C
N
270
N
C
N
271
N
O
N
272
N
C
N
273
N
C
N
274
N
S
N
275
N
C
N
276
N
O
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
N
N
289
S
C
N
290
N
C
N
291
N
O
N
292
N
C
Y
293
N
C
Y
294
N
C
Y
295
N
C
Y
296
N
C
Y
297
N
C
Y
298
N
C
N
299
N
O
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
N
N
312
S
C
N
313
N
C
N
314
N
O
N
315
N
C
N
316
N
C
N
317
N
C
N
318
N
O
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
N
N
329
S
C
N
330
N
C
N
331
N
O
N
332
N
C
N
333
N
O
N
334
N
O
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
N
N
343
S
C
N
344
N
C
N
345
N
O
N
346
R
C
N
347
N
O
N
348
N
C
N
349
N
O
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
N
N
360
S
C
N
361
N
C
N
362
N
O
N
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
N
Y
368
N
C
Y
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
C
N
373
N
O
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
N
N
387
S
C
N
388
N
C
N
389
N
O
N
390
N
C
Y
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
C
N
397
N
O
N
398
N
O
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
N
N
411
S
C
N
412
N
C
N
413
N
O
N
414
N
C
N
415
N
C
N
416
N
C
N
417
N
O
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
doub
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
doub
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
doub
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
doub
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
doub
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
doub
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
doub
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
Y
177
N
sing
Y
178
N
doub
Y
179
N
doub
N
180
N
sing
Y
181
N
sing
N
182
N
sing
Y
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
doub
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
doub
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
doub
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
doub
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
Y
285
N
doub
Y
286
N
sing
Y
287
N
sing
N
288
N
sing
Y
289
N
doub
N
290
N
sing
Y
291
N
doub
N
292
N
sing
Y
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
doub
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
doub
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
Y
354
N
doub
Y
355
N
sing
Y
356
N
sing
N
357
N
sing
Y
358
N
doub
Y
359
N
sing
Y
360
N
sing
N
361
N
sing
Y
362
N
sing
Y
363
N
doub
N
364
N
sing
Y
365
N
doub
N
366
N
sing
Y
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
doub
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
Y
382
N
doub
Y
383
N
sing
Y
384
N
sing
N
385
N
sing
Y
386
N
doub
N
387
N
sing
Y
388
N
doub
N
389
N
sing
Y
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
doub
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
To be Published
0353
The 1.9A crystal structure of the MutT/nudix family protein from Enterococcus faecalis
10.2210/pdb2azw/pdb
pdb_00002azw
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
mirrors
CCD
2005-02-06
ADSC QUANTUM 315
Si 111 channel
SINGLE WAVELENGTH
M
x-ray
1
0.9798
1.0
19-ID
APS
0.9798
SYNCHROTRON
APS BEAMLINE 19-ID
17044.043
MutT/nudix family protein
1
man
polymer
238.278
PENTAETHYLENE GLYCOL
1
syn
non-polymer
18.015
water
160
nat
water
no
no
MKTPTFGKREETLTYQTRYAAYIIVSKPENNTMVLVQAPNGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIGCYLGE
ADEYFYSNHRQTAYYNPGYFYVANTWRQLSEPLERTNTLHWVAPEEAVRLLKRGSHRWAVEKWLAAAS
MKTPTFGKREETLTYQTRYAAYIIVSKPENNTMVLVQAPNGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIGCYLGE
ADEYFYSNHRQTAYYNPGYFYVANTWRQLSEPLERTNTLHWVAPEEAVRLLKRGSHRWAVEKWLAAAS
A
APC28983
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Enterococcus
Enterococcus faecalis
V583
Escherichia
Escherichia coli
sample
226185
Enterococcus faecalis
469008
Escherichia coli BL21(DE3)
BL21(DE3)
plasmid
pET15b
1
3.19
61
VAPOR DIFFUSION, SITTING DROP
7.5
0.1M HEPES, 25% PEG3350, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
Midwest Center for Structural Genomics
MCSG
PSI, Protein Structure Initiative
chem_comp_atom
chem_comp_bond
database_2
struct_site
repository
Initial release
Version format compliance
Advisory
Source and taxonomy
Version format compliance
Data collection
Database references
Derived calculations
1
0
2006-01-10
1
1
2008-05-01
1
2
2011-07-13
1
3
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
RCSB
Y
RCSB
2005-09-12
REL
REL
1PE
PENTAETHYLENE GLYCOL
HOH
water
DRG
1
2
1PE
1PE
188
A
HOH
1
3
HOH
HOH
189
A
HOH
2
3
HOH
HOH
190
A
HOH
3
3
HOH
HOH
191
A
HOH
6
3
HOH
HOH
192
A
HOH
7
3
HOH
HOH
193
A
HOH
8
3
HOH
HOH
194
A
HOH
9
3
HOH
HOH
195
A
HOH
10
3
HOH
HOH
196
A
HOH
11
3
HOH
HOH
197
A
HOH
12
3
HOH
HOH
198
A
HOH
13
3
HOH
HOH
199
A
HOH
14
3
HOH
HOH
200
A
HOH
16
3
HOH
HOH
201
A
HOH
17
3
HOH
HOH
202
A
HOH
18
3
HOH
HOH
203
A
HOH
19
3
HOH
HOH
204
A
HOH
20
3
HOH
HOH
205
A
HOH
22
3
HOH
HOH
206
A
HOH
23
3
HOH
HOH
207
A
HOH
24
3
HOH
HOH
208
A
HOH
25
3
HOH
HOH
209
A
HOH
27
3
HOH
HOH
210
A
HOH
28
3
HOH
HOH
211
A
HOH
30
3
HOH
HOH
212
A
HOH
31
3
HOH
HOH
213
A
HOH
32
3
HOH
HOH
214
A
HOH
33
3
HOH
HOH
215
A
HOH
34
3
HOH
HOH
216
A
HOH
35
3
HOH
HOH
217
A
HOH
37
3
HOH
HOH
218
A
HOH
38
3
HOH
HOH
219
A
HOH
39
3
HOH
HOH
220
A
HOH
40
3
HOH
HOH
221
A
HOH
41
3
HOH
HOH
222
A
HOH
42
3
HOH
HOH
223
A
HOH
43
3
HOH
HOH
224
A
HOH
44
3
HOH
HOH
225
A
HOH
45
3
HOH
HOH
226
A
HOH
46
3
HOH
HOH
227
A
HOH
47
3
HOH
HOH
228
A
HOH
48
3
HOH
HOH
229
A
HOH
49
3
HOH
HOH
230
A
HOH
50
3
HOH
HOH
231
A
HOH
51
3
HOH
HOH
232
A
HOH
52
3
HOH
HOH
233
A
HOH
53
3
HOH
HOH
234
A
HOH
54
3
HOH
HOH
235
A
HOH
55
3
HOH
HOH
236
A
HOH
57
3
HOH
HOH
237
A
HOH
58
3
HOH
HOH
238
A
HOH
59
3
HOH
HOH
239
A
HOH
61
3
HOH
HOH
240
A
HOH
62
3
HOH
HOH
241
A
HOH
63
3
HOH
HOH
242
A
HOH
64
3
HOH
HOH
243
A
HOH
65
3
HOH
HOH
244
A
HOH
66
3
HOH
HOH
245
A
HOH
67
3
HOH
HOH
246
A
HOH
68
3
HOH
HOH
247
A
HOH
69
3
HOH
HOH
248
A
HOH
70
3
HOH
HOH
249
A
HOH
71
3
HOH
HOH
250
A
HOH
72
3
HOH
HOH
251
A
HOH
73
3
HOH
HOH
252
A
HOH
74
3
HOH
HOH
253
A
HOH
76
3
HOH
HOH
254
A
HOH
77
3
HOH
HOH
255
A
HOH
78
3
HOH
HOH
256
A
HOH
79
3
HOH
HOH
257
A
HOH
80
3
HOH
HOH
258
A
HOH
81
3
HOH
HOH
259
A
HOH
82
3
HOH
HOH
260
A
HOH
83
3
HOH
HOH
261
A
HOH
84
3
HOH
HOH
262
A
HOH
85
3
HOH
HOH
263
A
HOH
87
3
HOH
HOH
264
A
HOH
88
3
HOH
HOH
265
A
HOH
91
3
HOH
HOH
266
A
HOH
92
3
HOH
HOH
267
A
HOH
93
3
HOH
HOH
268
A
HOH
94
3
HOH
HOH
269
A
HOH
95
3
HOH
HOH
270
A
HOH
96
3
HOH
HOH
271
A
HOH
97
3
HOH
HOH
272
A
HOH
100
3
HOH
HOH
273
A
HOH
101
3
HOH
HOH
274
A
HOH
102
3
HOH
HOH
275
A
HOH
103
3
HOH
HOH
276
A
HOH
104
3
HOH
HOH
277
A
HOH
106
3
HOH
HOH
278
A
HOH
107
3
HOH
HOH
279
A
HOH
108
3
HOH
HOH
280
A
HOH
109
3
HOH
HOH
281
A
HOH
110
3
HOH
HOH
282
A
HOH
111
3
HOH
HOH
283
A
HOH
112
3
HOH
HOH
284
A
HOH
113
3
HOH
HOH
285
A
HOH
114
3
HOH
HOH
286
A
HOH
115
3
HOH
HOH
287
A
HOH
116
3
HOH
HOH
288
A
HOH
117
3
HOH
HOH
289
A
HOH
119
3
HOH
HOH
290
A
HOH
120
3
HOH
HOH
291
A
HOH
121
3
HOH
HOH
292
A
HOH
122
3
HOH
HOH
293
A
HOH
123
3
HOH
HOH
294
A
HOH
125
3
HOH
HOH
295
A
HOH
126
3
HOH
HOH
296
A
HOH
127
3
HOH
HOH
297
A
HOH
129
3
HOH
HOH
298
A
HOH
131
3
HOH
HOH
299
A
HOH
133
3
HOH
HOH
300
A
HOH
135
3
HOH
HOH
301
A
HOH
138
3
HOH
HOH
302
A
HOH
139
3
HOH
HOH
303
A
HOH
141
3
HOH
HOH
304
A
HOH
142
3
HOH
HOH
305
A
HOH
144
3
HOH
HOH
306
A
HOH
145
3
HOH
HOH
307
A
HOH
147
3
HOH
HOH
308
A
HOH
148
3
HOH
HOH
309
A
HOH
149
3
HOH
HOH
310
A
HOH
150
3
HOH
HOH
311
A
HOH
151
3
HOH
HOH
312
A
HOH
152
3
HOH
HOH
313
A
HOH
153
3
HOH
HOH
314
A
HOH
154
3
HOH
HOH
315
A
HOH
155
3
HOH
HOH
316
A
HOH
156
3
HOH
HOH
317
A
HOH
157
3
HOH
HOH
318
A
HOH
3
3
HOH
HOH
319
A
HOH
4
3
HOH
HOH
320
A
HOH
5
3
HOH
HOH
321
A
HOH
6
3
HOH
HOH
322
A
HOH
7
3
HOH
HOH
323
A
HOH
8
3
HOH
HOH
324
A
HOH
9
3
HOH
HOH
325
A
HOH
10
3
HOH
HOH
326
A
HOH
11
3
HOH
HOH
327
A
HOH
12
3
HOH
HOH
328
A
HOH
13
3
HOH
HOH
329
A
HOH
14
3
HOH
HOH
330
A
HOH
15
3
HOH
HOH
331
A
HOH
16
3
HOH
HOH
332
A
HOH
17
3
HOH
HOH
333
A
HOH
18
3
HOH
HOH
334
A
HOH
19
3
HOH
HOH
335
A
HOH
20
3
HOH
HOH
336
A
HOH
21
3
HOH
HOH
337
A
HOH
22
3
HOH
HOH
338
A
HOH
23
3
HOH
HOH
339
A
HOH
24
3
HOH
HOH
340
A
HOH
25
3
HOH
HOH
341
A
HOH
26
3
HOH
HOH
342
A
HOH
27
3
HOH
HOH
343
A
HOH
28
3
HOH
HOH
344
A
HOH
30
3
HOH
HOH
345
A
HOH
31
3
HOH
HOH
346
A
HOH
32
3
HOH
HOH
347
A
HOH
33
3
HOH
HOH
348
A
n
1
1
A
LYS
2
n
2
LYS
2
A
THR
3
n
3
THR
3
A
PRO
4
n
4
PRO
4
A
THR
5
n
5
THR
5
A
PHE
6
n
6
PHE
6
A
GLY
7
n
7
GLY
7
A
LYS
8
n
8
LYS
8
A
ARG
9
n
9
ARG
9
A
GLU
10
n
10
GLU
10
A
GLU
11
n
11
GLU
11
A
THR
12
n
12
THR
12
A
LEU
13
n
13
LEU
13
A
THR
14
n
14
THR
14
A
TYR
15
n
15
TYR
15
A
GLN
16
n
16
GLN
16
A
THR
17
n
17
THR
17
A
ARG
18
n
18
ARG
18
A
TYR
19
n
19
TYR
19
A
ALA
20
n
20
ALA
20
A
ALA
21
n
21
ALA
21
A
TYR
22
n
22
TYR
22
A
ILE
23
n
23
ILE
23
A
ILE
24
n
24
ILE
24
A
VAL
25
n
25
VAL
25
A
SER
26
n
26
SER
26
A
LYS
27
n
27
LYS
27
A
PRO
28
n
28
PRO
28
A
GLU
29
n
29
GLU
29
A
ASN
30
n
30
ASN
30
A
ASN
31
n
31
ASN
31
A
THR
32
n
32
THR
32
A
MET
33
n
33
MET
33
A
VAL
34
n
34
VAL
34
A
LEU
35
n
35
LEU
35
A
VAL
36
n
36
VAL
36
A
GLN
37
n
37
GLN
37
A
ALA
38
n
38
ALA
38
A
PRO
39
n
39
PRO
39
A
ASN
40
n
40
ASN
40
A
GLY
41
n
41
GLY
41
A
ALA
42
n
42
ALA
42
A
TYR
43
n
43
TYR
43
A
PHE
44
n
44
PHE
44
A
LEU
45
n
45
LEU
45
A
PRO
46
n
46
PRO
46
A
GLY
47
n
47
GLY
47
A
GLY
48
n
48
GLY
48
A
GLU
49
n
49
GLU
49
A
ILE
50
n
50
ILE
50
A
GLU
51
n
51
GLU
51
A
GLY
52
n
52
GLY
52
A
THR
53
n
53
THR
53
A
GLU
54
n
54
GLU
54
A
THR
55
n
55
THR
55
A
LYS
56
n
56
LYS
56
A
GLU
57
n
57
GLU
57
A
GLU
58
n
58
GLU
58
A
ALA
59
n
59
ALA
59
A
ILE
60
n
60
ILE
60
A
HIS
61
n
61
HIS
61
A
ARG
62
n
62
ARG
62
A
GLU
63
n
63
GLU
63
A
VAL
64
n
64
VAL
64
A
LEU
65
n
65
LEU
65
A
GLU
66
n
66
GLU
66
A
GLU
67
n
67
GLU
67
A
LEU
68
n
68
LEU
68
A
GLY
69
n
69
GLY
69
A
ILE
70
n
70
ILE
70
A
SER
71
n
71
SER
71
A
VAL
72
n
72
VAL
72
A
GLU
73
n
73
GLU
73
A
ILE
74
n
74
ILE
74
A
GLY
75
n
75
GLY
75
A
CYS
76
n
76
CYS
76
A
TYR
77
n
77
TYR
77
A
LEU
78
n
78
LEU
78
A
GLY
79
n
79
GLY
79
A
GLU
80
n
80
GLU
80
A
ALA
81
n
81
ALA
81
A
ASP
82
n
82
ASP
82
A
GLU
83
n
83
GLU
83
A
TYR
84
n
84
TYR
84
A
PHE
85
n
85
PHE
85
A
TYR
86
n
86
TYR
86
A
SER
87
n
87
SER
87
A
ASN
88
n
88
ASN
88
A
HIS
89
n
89
HIS
89
A
ARG
90
n
90
ARG
90
A
GLN
91
n
91
GLN
91
A
THR
92
n
92
THR
92
A
ALA
93
n
93
ALA
93
A
TYR
94
n
94
TYR
94
A
TYR
95
n
95
TYR
95
A
ASN
96
n
96
ASN
96
A
PRO
97
n
97
PRO
97
A
GLY
98
n
98
GLY
98
A
TYR
99
n
99
TYR
99
A
PHE
100
n
100
PHE
100
A
TYR
101
n
101
TYR
101
A
VAL
102
n
102
VAL
102
A
ALA
103
n
103
ALA
103
A
ASN
104
n
104
ASN
104
A
THR
105
n
105
THR
105
A
TRP
106
n
106
TRP
106
A
ARG
107
n
107
ARG
107
A
GLN
108
n
108
GLN
108
A
LEU
109
n
109
LEU
109
A
SER
110
n
110
SER
110
A
GLU
111
n
111
GLU
111
A
PRO
112
n
112
PRO
112
A
LEU
113
n
113
LEU
113
A
n
114
114
A
ARG
115
n
115
ARG
115
A
THR
116
n
116
THR
116
A
ASN
117
n
117
ASN
117
A
THR
118
n
118
THR
118
A
LEU
119
n
119
LEU
119
A
HIS
120
n
120
HIS
120
A
TRP
121
n
121
TRP
121
A
VAL
122
n
122
VAL
122
A
ALA
123
n
123
ALA
123
A
PRO
124
n
124
PRO
124
A
GLU
125
n
125
GLU
125
A
GLU
126
n
126
GLU
126
A
ALA
127
n
127
ALA
127
A
VAL
128
n
128
VAL
128
A
ARG
129
n
129
ARG
129
A
LEU
130
n
130
LEU
130
A
LEU
131
n
131
LEU
131
A
LYS
132
n
132
LYS
132
A
ARG
133
n
133
ARG
133
A
GLY
134
n
134
GLY
134
A
SER
135
n
135
SER
135
A
HIS
136
n
136
HIS
136
A
ARG
137
n
137
ARG
137
A
TRP
138
n
138
TRP
138
A
ALA
139
n
139
ALA
139
A
VAL
140
n
140
VAL
140
A
GLU
141
n
141
GLU
141
A
LYS
142
n
142
LYS
142
A
TRP
143
n
143
TRP
143
A
LEU
144
n
144
LEU
144
A
ALA
145
n
145
ALA
145
A
ALA
146
n
146
ALA
146
A
ALA
147
n
147
ALA
147
A
SER
148
n
148
SER
148
A
1.6277
-1.2929
-0.1907
1.9140
0.3670
3.7925
0.1489
0.1072
0.0377
-0.1941
-0.0874
-0.1544
0.2894
0.3522
-0.0615
-0.0521
0.0860
0.0066
-0.0274
-0.0024
-0.0655
refined
16.5160
33.9600
12.5200
X-RAY DIFFRACTION
A
2
A
2
A
50
A
50
X-RAY DIFFRACTION
1
A
51
A
51
A
99
A
99
X-RAY DIFFRACTION
1
A
100
A
100
A
148
A
148
X-RAY DIFFRACTION
1
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
PHE
6
A
N
PHE
6
A
O
TYR
84
A
O
TYR
84
A
N
PHE
85
A
N
PHE
85
A
O
TYR
94
A
O
TYR
94
A
O
TYR
95
A
O
TYR
95
A
N
GLN
16
A
N
GLN
16
A
N
PHE
6
A
N
PHE
6
A
O
TYR
84
A
O
TYR
84
A
N
PHE
85
A
N
PHE
85
A
O
TYR
94
A
O
TYR
94
A
O
ALA
103
A
O
ALA
103
A
N
ILE
24
A
N
ILE
24
A
N
ALA
21
A
N
ALA
21
A
O
GLY
48
A
O
GLY
48
A
N
LYS
27
A
N
LYS
27
A
O
THR
32
A
O
THR
32
A
N
VAL
36
A
N
VAL
36
A
O
PHE
44
A
O
PHE
44
A
N
LYS
27
A
N
LYS
27
A
O
THR
32
A
O
THR
32
A
N
GLN
37
A
N
GLN
37
A
O
THR
118
A
O
THR
118
1
A
MET
1
A
MET
1
1
Y
1
A
GLU
114
A
GLU
114
1
Y
36.935
0.58
0.00
0.00
0.58
0.00
-1.15
0.957
0.947
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.22969
0.19303
0.19479
0.19479
1.9
64.28
929
17434
17228
5.1
98.82
5.430
0.086
RANDOM
LIKELY RESIDUAL
1
THROUGHOUT
0
SAD
0.126
0.124
0.80
0.80
1.20
MAXIMUM LIKELIHOOD WITH PHASES
MASK
0.040
0.026
5.0
0.5
0.32
1.9
64.28
160
1364
16
0
1188
0.010
0.022
1235
1.097
1.950
1674
6.554
5.000
144
26.646
23.387
62
14.414
15.000
193
14.104
15.000
9
0.078
0.200
175
0.004
0.020
953
0.185
0.200
541
0.299
0.200
835
0.134
0.200
145
0.179
0.200
30
0.174
0.200
26
0.745
1.500
744
1.209
2.000
1168
1.589
3.000
575
2.408
4.500
506
0.295
0.244
1.932
62
1078
20
85.91
37
1.9
64.28
2AZW
17434
17228
2.0
2.0
0.086
1
40.2
9.2
99.9
0.662
1.90
1.97
2.7
3300
1
7.3
99.7
refinement
REFMAC
5.2.0005
data collection
SBC-Collect
data scaling
HKL-2000
phasing
CNS
Crystal structure of the MutT/nudix family protein from Enterococcus faecalis
1
N
N
2
N
N
3
N
N
This protein may existed as monomer.
A
PRO
28
A
PRO
28
HELX_P
A
ASN
31
A
ASN
31
5
1
4
A
THR
55
A
THR
55
HELX_P
A
GLY
69
A
GLY
69
1
2
15
A
ALA
123
A
ALA
123
HELX_P
A
LEU
131
A
LEU
131
1
3
9
A
ARG
133
A
ARG
133
HELX_P
A
ALA
146
A
ALA
146
1
4
14
STRUCTURAL GENOMICS, UNKNOWN FUNCTION
MutT/nudix, Enterococcus faecalis, Structural genomics, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION
NP_814871
GB
1
1
29375717
MKTPTFGKREETLTYQTRYAAYIIVSKPENNTMVLVQAPNGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIGCYLGE
ADEYFYSNHRQTAYYNPGYFYVANTWRQLSEPLERTNTLHWVAPEEAVRLLKRGSHRWAVEKWLAAAS
1
148
2AZW
1
148
29375717
A
1
1
148
4
5
3
3
parallel
anti-parallel
parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
THR
5
A
THR
5
A
PHE
6
A
PHE
6
A
ILE
70
A
ILE
70
A
SER
87
A
SER
87
A
THR
92
A
THR
92
A
GLN
108
A
GLN
108
A
GLN
16
A
GLN
16
A
THR
17
A
THR
17
A
THR
5
A
THR
5
A
PHE
6
A
PHE
6
A
ILE
70
A
ILE
70
A
SER
87
A
SER
87
A
THR
92
A
THR
92
A
GLN
108
A
GLN
108
A
ALA
20
A
ALA
20
A
ILE
24
A
ILE
24
A
GLY
47
A
GLY
47
A
GLU
49
A
GLU
49
A
SER
26
A
SER
26
A
LYS
27
A
LYS
27
A
THR
32
A
THR
32
A
GLN
37
A
GLN
37
A
TYR
43
A
TYR
43
A
PHE
44
A
PHE
44
A
SER
26
A
SER
26
A
LYS
27
A
LYS
27
A
THR
32
A
THR
32
A
GLN
37
A
GLN
37
A
THR
118
A
THR
118
A
VAL
122
A
VAL
122
BINDING SITE FOR RESIDUE 1PE A 188
A
1PE
188
Software
5
A
GLU
54
A
GLU
54
5
1_555
A
LYS
56
A
LYS
56
5
1_555
A
TYR
77
A
TYR
77
5
1_555
A
TYR
99
A
TYR
99
5
1_555
A
HOH
234
C
HOH
5
1_555
96
P 43 21 2