1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Bjorndahl, T.C.
Andrew, L.C.
Wishart, D.S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C2 H4 O
44.053
ACETYL GROUP
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
C9 H18 N2 O3
202.251
n
ethyl (4~{S})-4,7-bis(azanyl)-7-oxidanylidene-heptanoate
L-peptide COOH carboxy terminus
N
1
N
C
N
2
N
O
N
3
N
C
N
4
N
H
N
5
N
H
N
6
N
H
N
7
N
H
N
8
N
N
N
9
S
C
N
10
N
C
N
11
N
O
N
12
N
C
N
13
N
O
N
14
N
H
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
N
N
22
S
C
N
23
N
C
N
24
N
O
N
25
N
C
N
26
N
C
N
27
N
C
N
28
N
N
N
29
N
C
N
30
N
N
N
31
N
N
N
32
N
O
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
N
N
49
S
C
N
50
N
C
N
51
N
O
N
52
N
C
N
53
N
C
N
54
N
O
N
55
N
N
N
56
N
O
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
N
N
66
S
C
N
67
N
C
N
68
N
O
N
69
N
C
N
70
N
C
N
71
N
O
N
72
N
O
N
73
N
O
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
N
N
82
R
C
N
83
N
C
N
84
N
O
N
85
N
C
N
86
N
S
N
87
N
O
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
N
N
96
S
C
N
97
N
C
N
98
N
O
N
99
N
C
N
100
N
C
N
101
N
C
N
102
N
O
N
103
N
N
N
104
N
O
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
N
N
116
S
C
N
117
N
C
N
118
N
O
N
119
N
C
N
120
N
C
N
121
N
C
N
122
N
O
N
123
N
O
N
124
N
O
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
N
N
135
N
C
N
136
N
C
N
137
N
O
N
138
N
O
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
N
N
145
S
C
N
146
N
C
N
147
N
O
N
148
N
C
Y
149
N
C
Y
150
N
N
Y
151
N
C
Y
152
N
C
Y
153
N
N
N
154
N
O
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
N
N
166
S
C
N
167
N
C
N
168
N
O
N
169
S
C
N
170
N
C
N
171
N
C
N
172
N
C
N
173
N
O
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
N
N
188
S
C
N
189
N
C
N
190
N
O
N
191
N
C
N
192
N
C
N
193
N
C
N
194
N
C
N
195
N
O
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
N
N
210
S
C
N
211
N
C
N
212
N
O
N
213
N
C
N
214
N
C
N
215
N
C
N
216
N
C
N
217
N
N
N
218
N
O
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
N
N
235
S
C
N
236
N
C
N
237
N
O
N
238
N
C
N
239
N
C
N
240
N
S
N
241
N
C
N
242
N
O
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
N
N
255
S
C
N
256
N
C
N
257
N
O
N
258
N
C
Y
259
N
C
Y
260
N
C
Y
261
N
C
Y
262
N
C
Y
263
N
C
Y
264
N
C
N
265
N
O
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
N
N
278
S
C
N
279
N
C
N
280
N
O
N
281
N
C
N
282
N
C
N
283
N
C
N
284
N
O
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
N
N
295
S
C
N
296
N
C
N
297
N
O
N
298
N
C
N
299
N
O
N
300
N
O
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
N
N
309
S
C
N
310
N
C
N
311
N
O
N
312
R
C
N
313
N
O
N
314
N
C
N
315
N
O
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
N
N
326
S
C
N
327
N
C
N
328
N
O
N
329
N
C
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
N
336
N
O
N
337
N
O
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
N
C
N
354
N
C
N
355
N
C
N
356
N
O
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
N
N
369
S
C
N
370
N
C
N
371
N
C
N
372
N
C
N
373
N
O
N
374
N
N
N
375
N
C
N
376
N
C
N
377
N
C
N
378
N
O
N
379
N
O
N
380
N
C
N
381
N
C
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
doub
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
doub
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
doub
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
doub
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
doub
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
doub
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
doub
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
doub
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
Y
146
N
sing
Y
147
N
doub
Y
148
N
doub
N
149
N
sing
Y
150
N
sing
N
151
N
sing
Y
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
doub
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
doub
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
doub
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
doub
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
doub
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
Y
252
N
doub
Y
253
N
sing
Y
254
N
sing
N
255
N
sing
Y
256
N
doub
N
257
N
sing
Y
258
N
doub
N
259
N
sing
Y
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
doub
N
326
N
sing
Y
327
N
doub
N
328
N
sing
Y
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
doub
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
doub
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
46
12945
12958
10.1021/bi7010866
17944485
NMR solution structures of the apo and peptide-inhibited human rhinovirus 3C protease (Serotype 14): structural and dynamic comparison
2007
10.2210/pdb2b0f/pdb
pdb_00002b0f
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
x-ray
1
1.0
20021.877
Protease 3C
3.4.22.28
Human Rhinovirus serotype 14 3C Protease
1
man
polymer
801.970
Ace-LEALFQ-ethylpropionate
1
syn
polymer
Picornain 3C,P3C
no
no
GPNTEFALSLLRKNIMTITTSKGEFTGLGIHDRVCVIPTHAQPGDDVLVNGQKIRVKDKYKLVDPENINLELTVLTLDRN
EKFRDIRGFISEDLEGVDATLVVHSNNFTNTILEVGPVTMAGLINLSSTPTNRMIRYDYATKTGQCGGVLCATGKIFGIH
VGGNGRQGFSAQLKKQYFVEKQ
GPNTEFALSLLRKNIMTITTSKGEFTGLGIHDRVCVIPTHAQPGDDVLVNGQKIRVKDKYKLVDPENINLELTVLTLDRN
EKFRDIRGFISEDLEGVDATLVVHSNNFTNTILEVGPVTMAGLINLSSTPTNRMIRYDYATKTGQCGGVLCATGKIFGIH
VGGNGRQGFSAQLKKQYFVEKQ
A
polypeptide(L)
no
yes
(ACE)LEALF(YTF)
XLEALFQ
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Rhinovirus
Human rhinovirus B
Escherichia
Escherichia coli
sample
1
182
12131
rhinovirus B14
469008
Escherichia coli BL21(DE3)
BL21-DE3
plasmid
Biological sequence
pLysS
atom_site
chem_comp
database_2
entity
entity_name_com
entity_poly
entity_poly_seq
entity_src_gen
pdbx_entity_src_syn
pdbx_poly_seq_scheme
pdbx_unobs_or_zero_occ_atoms
struct_conn
struct_ref
struct_ref_seq
atom_site
chem_comp_atom
chem_comp_bond
struct_conn
repository
Initial release
Version format compliance
Atomic model
Database references
Derived calculations
Non-polymer description
Structure summary
Version format compliance
Other
Advisory
Atomic model
Database references
Derived calculations
Non-polymer description
Polymer sequence
Source and taxonomy
Structure summary
Atomic model
Data collection
Derived calculations
1
0
2006-09-05
1
1
2008-05-01
1
2
2011-07-13
1
3
2012-12-12
2
0
2023-03-01
3
0
2023-11-15
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.group_PDB
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.type_symbol
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.id
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.type
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_entity.formula_weight
_entity.pdbx_description
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
_entity_src_gen.pdbx_beg_seq_num
_entity_src_gen.pdbx_end_seq_num
_entity_src_gen.pdbx_gene_src_scientific_name
_entity_src_gen.pdbx_host_org_vector_type
_entity_src_gen.pdbx_seq_type
_pdbx_entity_src_syn.ncbi_taxonomy_id
_pdbx_entity_src_syn.organism_scientific
_pdbx_entity_src_syn.pdbx_beg_seq_num
_pdbx_entity_src_syn.pdbx_end_seq_num
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_auth_seq_align_end
_struct_ref_seq.seq_align_end
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_atom_id
_atom_site.label_atom_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr2_label_atom_id
Same protein of a different serotype (2) shares 51% sequence identity
Polio 3C protease, another homologue sharing 46% seqence identity.
RCSB
Y
RCSB
2005-09-13
REL
REL
Peptidyl inhibitor synthesized via solid and solution phase pedtide synthesis
32630
synthetic construct
sample
1
7
Inhibitor
Ace-LEALFQ-ethylpropionate
Peptide-like
H-bond donors determined from 15N HSQC exchanged into D2O. 3J HNHA couplings determined from HNHA. 13C-seperated NOESY collected in 99.96% D2O without wet water suppression to achieve cross strand beta-sheet HA-HA NOEs.
back calculated data agree with experimental NOESY spectrum,structures with acceptable covalent geometry,structures with favorable non-bond energy,structures with the least restraint violations,structures with the lowest energy
100
20
3D_13C-separated_NOESY
3D_15N-separated_NOESY
3D_13C-separated_NOESY
2D NOESY
HNHA
15N HSQC
20mM KH2PO4
6.5
ambient
25
K
20mM KH2PO4
6.5
ambient
25
K
simulated annealing
molecular dynamics
torsion angle dynamics
RECOORD water refinement
1
lowest energy
0.75mM HRV14-3C with covalent inhibitor
20mM KH2PO4
15mM DTT
0.5mM EDTA
0.1mM DSS
pH 6.5; 90% H2O, 10% D2O
90% H2O/10% D2O
0.75mM HRV14-3C with covalent inhibitor
20mM KH2PO4
15mM DTT
0.5mM EDTA
0.1mM DSS
pD 6.5; 99.96% D2O
99.96% D2O
Brunger
structure solution
X-PLOR
XPLOR-NIH v.2.10
Brunger
refinement
CNS
1.1
500
Varian
INOVA
GLY
1
n
1
GLY
1
A
PRO
2
n
2
PRO
2
A
ASN
3
n
3
ASN
3
A
THR
4
n
4
THR
4
A
GLU
5
n
5
GLU
5
A
PHE
6
n
6
PHE
6
A
ALA
7
n
7
ALA
7
A
LEU
8
n
8
LEU
8
A
SER
9
n
9
SER
9
A
LEU
10
n
10
LEU
10
A
LEU
11
n
11
LEU
11
A
ARG
12
n
12
ARG
12
A
LYS
13
n
13
LYS
13
A
ASN
14
n
14
ASN
14
A
ILE
15
n
15
ILE
15
A
MET
16
n
16
MET
16
A
THR
17
n
17
THR
17
A
ILE
18
n
18
ILE
18
A
THR
19
n
19
THR
19
A
THR
20
n
20
THR
20
A
SER
21
n
21
SER
21
A
LYS
22
n
22
LYS
22
A
GLY
23
n
23
GLY
23
A
GLU
24
n
24
GLU
24
A
PHE
25
n
25
PHE
25
A
THR
26
n
26
THR
26
A
GLY
27
n
27
GLY
27
A
LEU
28
n
28
LEU
28
A
GLY
29
n
29
GLY
29
A
ILE
30
n
30
ILE
30
A
HIS
31
n
31
HIS
31
A
ASP
32
n
32
ASP
32
A
ARG
33
n
33
ARG
33
A
VAL
34
n
34
VAL
34
A
CYS
35
n
35
CYS
35
A
VAL
36
n
36
VAL
36
A
ILE
37
n
37
ILE
37
A
PRO
38
n
38
PRO
38
A
THR
39
n
39
THR
39
A
HIS
40
n
40
HIS
40
A
ALA
41
n
41
ALA
41
A
GLN
42
n
42
GLN
42
A
PRO
43
n
43
PRO
43
A
GLY
44
n
44
GLY
44
A
ASP
45
n
45
ASP
45
A
ASP
46
n
46
ASP
46
A
VAL
47
n
47
VAL
47
A
LEU
48
n
48
LEU
48
A
VAL
49
n
49
VAL
49
A
ASN
50
n
50
ASN
50
A
GLY
51
n
51
GLY
51
A
GLN
52
n
52
GLN
52
A
LYS
53
n
53
LYS
53
A
ILE
54
n
54
ILE
54
A
ARG
55
n
55
ARG
55
A
VAL
56
n
56
VAL
56
A
LYS
57
n
57
LYS
57
A
ASP
58
n
58
ASP
58
A
LYS
59
n
59
LYS
59
A
TYR
60
n
60
TYR
60
A
LYS
61
n
61
LYS
61
A
LEU
62
n
62
LEU
62
A
VAL
63
n
63
VAL
63
A
ASP
64
n
64
ASP
64
A
PRO
65
n
65
PRO
65
A
GLU
66
n
66
GLU
66
A
ASN
67
n
67
ASN
67
A
ILE
68
n
68
ILE
68
A
ASN
69
n
69
ASN
69
A
LEU
70
n
70
LEU
70
A
GLU
71
n
71
GLU
71
A
LEU
72
n
72
LEU
72
A
THR
73
n
73
THR
73
A
VAL
74
n
74
VAL
74
A
LEU
75
n
75
LEU
75
A
THR
76
n
76
THR
76
A
LEU
77
n
77
LEU
77
A
ASP
78
n
78
ASP
78
A
ARG
79
n
79
ARG
79
A
ASN
80
n
80
ASN
80
A
GLU
81
n
81
GLU
81
A
LYS
82
n
82
LYS
82
A
PHE
83
n
83
PHE
83
A
ARG
84
n
84
ARG
84
A
ASP
85
n
85
ASP
85
A
ILE
86
n
86
ILE
86
A
ARG
87
n
87
ARG
87
A
GLY
88
n
88
GLY
88
A
PHE
89
n
89
PHE
89
A
ILE
90
n
90
ILE
90
A
SER
91
n
91
SER
91
A
GLU
92
n
92
GLU
92
A
ASP
93
n
93
ASP
93
A
LEU
94
n
94
LEU
94
A
GLU
95
n
95
GLU
95
A
GLY
96
n
96
GLY
96
A
VAL
97
n
97
VAL
97
A
ASP
98
n
98
ASP
98
A
ALA
99
n
99
ALA
99
A
THR
100
n
100
THR
100
A
LEU
101
n
101
LEU
101
A
VAL
102
n
102
VAL
102
A
VAL
103
n
103
VAL
103
A
HIS
104
n
104
HIS
104
A
SER
105
n
105
SER
105
A
ASN
106
n
106
ASN
106
A
ASN
107
n
107
ASN
107
A
PHE
108
n
108
PHE
108
A
THR
109
n
109
THR
109
A
ASN
110
n
110
ASN
110
A
THR
111
n
111
THR
111
A
ILE
112
n
112
ILE
112
A
LEU
113
n
113
LEU
113
A
GLU
114
n
114
GLU
114
A
VAL
115
n
115
VAL
115
A
GLY
116
n
116
GLY
116
A
PRO
117
n
117
PRO
117
A
VAL
118
n
118
VAL
118
A
THR
119
n
119
THR
119
A
MET
120
n
120
MET
120
A
ALA
121
n
121
ALA
121
A
GLY
122
n
122
GLY
122
A
LEU
123
n
123
LEU
123
A
ILE
124
n
124
ILE
124
A
ASN
125
n
125
ASN
125
A
LEU
126
n
126
LEU
126
A
SER
127
n
127
SER
127
A
SER
128
n
128
SER
128
A
THR
129
n
129
THR
129
A
PRO
130
n
130
PRO
130
A
THR
131
n
131
THR
131
A
ASN
132
n
132
ASN
132
A
ARG
133
n
133
ARG
133
A
MET
134
n
134
MET
134
A
ILE
135
n
135
ILE
135
A
ARG
136
n
136
ARG
136
A
TYR
137
n
137
TYR
137
A
ASP
138
n
138
ASP
138
A
TYR
139
n
139
TYR
139
A
ALA
140
n
140
ALA
140
A
THR
141
n
141
THR
141
A
LYS
142
n
142
LYS
142
A
THR
143
n
143
THR
143
A
GLY
144
n
144
GLY
144
A
GLN
145
n
145
GLN
145
A
CYS
146
n
146
CYS
146
A
GLY
147
n
147
GLY
147
A
GLY
148
n
148
GLY
148
A
VAL
149
n
149
VAL
149
A
LEU
150
n
150
LEU
150
A
CYS
151
n
151
CYS
151
A
ALA
152
n
152
ALA
152
A
THR
153
n
153
THR
153
A
GLY
154
n
154
GLY
154
A
LYS
155
n
155
LYS
155
A
ILE
156
n
156
ILE
156
A
PHE
157
n
157
PHE
157
A
GLY
158
n
158
GLY
158
A
ILE
159
n
159
ILE
159
A
HIS
160
n
160
HIS
160
A
VAL
161
n
161
VAL
161
A
GLY
162
n
162
GLY
162
A
GLY
163
n
163
GLY
163
A
ASN
164
n
164
ASN
164
A
GLY
165
n
165
GLY
165
A
ARG
166
n
166
ARG
166
A
GLN
167
n
167
GLN
167
A
GLY
168
n
168
GLY
168
A
PHE
169
n
169
PHE
169
A
SER
170
n
170
SER
170
A
ALA
171
n
171
ALA
171
A
GLN
172
n
172
GLN
172
A
LEU
173
n
173
LEU
173
A
LYS
174
n
174
LYS
174
A
LYS
175
n
175
LYS
175
A
GLN
176
n
176
GLN
176
A
TYR
177
n
177
TYR
177
A
PHE
178
n
178
PHE
178
A
VAL
179
n
179
VAL
179
A
GLU
180
n
180
GLU
180
A
LYS
181
n
181
LYS
181
A
GLN
182
n
182
GLN
182
A
ACE
1
n
1
ACE
1
B
LEU
2
n
2
LEU
2
B
GLU
3
n
3
GLU
3
B
ALA
4
n
4
ALA
4
B
LEU
5
n
5
LEU
5
B
PHE
6
n
6
PHE
6
B
GLN
7
n
7
YTF
7
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
MET
16
A
N
MET
16
A
O
GLY
27
A
O
GLY
27
A
N
LEU
28
A
N
LEU
28
A
O
VAL
36
A
O
VAL
36
A
N
CYS
35
A
N
CYS
35
A
O
LEU
75
A
O
LEU
75
A
O
LEU
72
A
O
LEU
72
A
N
LEU
62
A
N
LEU
62
A
O
ILE
54
A
O
ILE
54
A
N
VAL
47
A
N
VAL
47
A
O
LEU
48
A
O
LEU
48
A
N
THR
19
A
N
THR
19
A
N
THR
119
A
N
THR
119
A
O
ARG
136
A
O
ARG
136
A
N
ILE
135
A
N
ILE
135
A
O
SER
170
A
O
SER
170
A
O
GLN
167
A
O
GLN
167
A
N
ASN
164
A
N
ASN
164
A
O
LEU
113
A
O
LEU
113
A
N
LEU
101
A
N
LEU
101
A
N
VAL
102
A
N
VAL
102
A
O
VAL
149
A
O
VAL
149
A
N
ALA
152
A
N
ALA
152
A
O
LYS
155
A
O
LYS
155
A
N
GLY
163
A
N
GLY
163
B
O
LEU
5
B
O
LEU
5
B
O
LEU
5
B
O
LEU
5
A
N
GLY
163
A
N
GLY
163
1
A
O
GLN
182
A
O
GLN
182
1
Y
2
A
O
GLN
182
A
O
GLN
182
1
Y
3
A
O
GLN
182
A
O
GLN
182
1
Y
4
A
O
GLN
182
A
O
GLN
182
1
Y
5
A
O
GLN
182
A
O
GLN
182
1
Y
6
A
O
GLN
182
A
O
GLN
182
1
Y
7
A
O
GLN
182
A
O
GLN
182
1
Y
8
A
O
GLN
182
A
O
GLN
182
1
Y
9
A
O
GLN
182
A
O
GLN
182
1
Y
10
A
O
GLN
182
A
O
GLN
182
1
Y
11
A
O
GLN
182
A
O
GLN
182
1
Y
12
A
O
GLN
182
A
O
GLN
182
1
Y
13
A
O
GLN
182
A
O
GLN
182
1
Y
14
A
O
GLN
182
A
O
GLN
182
1
Y
15
A
O
GLN
182
A
O
GLN
182
1
Y
16
A
O
GLN
182
A
O
GLN
182
1
Y
17
A
O
GLN
182
A
O
GLN
182
1
Y
18
A
O
GLN
182
A
O
GLN
182
1
Y
19
A
O
GLN
182
A
O
GLN
182
1
Y
20
A
O
GLN
182
A
O
GLN
182
1
Y
2
A
A
H
O
LEU
LEU
62
72
1.52
2
A
A
O
H
GLY
HIS
148
160
1.54
2
A
A
O
H
THR
ARG
119
136
1.57
2
A
A
H
O
LEU
LEU
101
113
1.58
3
A
A
O
HG
LEU
SER
126
127
1.49
3
A
B
H
O
SER
ALA
127
4
1.55
3
A
A
O
H
GLY
HIS
148
160
1.59
3
A
A
H
O
LEU
LEU
62
72
1.59
4
A
A
HG1
OE2
THR
GLU
100
114
1.56
5
A
A
O
HG
LEU
SER
126
127
1.38
5
A
A
OE1
HZ1
GLU
LYS
92
175
1.51
5
A
A
H
O
ILE
VAL
30
34
1.56
5
A
A
O
H
GLY
HIS
148
160
1.57
6
A
A
H
O
ASP
ILE
64
68
1.56
7
A
A
O
H
ASP
ASN
64
67
1.48
7
A
A
H
O
LEU
LEU
62
72
1.56
8
A
A
H
O
ILE
SER
135
170
1.57
8
A
A
OD2
HE
ASP
ARG
45
55
1.59
8
A
A
O
H
GLY
HIS
148
160
1.60
9
A
A
H
O
LEU
LEU
62
72
1.51
9
A
A
OD2
HH
ASP
TYR
64
177
1.56
9
A
A
O
H
PHE
LEU
157
173
1.56
9
A
A
H
O
ILE
SER
135
170
1.58
9
A
A
HD22
O
ASN
ARG
14
84
1.58
10
A
A
O
HZ1
GLU
LYS
95
155
1.55
10
A
A
O
H
ASP
ASN
64
67
1.57
10
A
A
O
H
GLY
HIS
148
160
1.59
11
A
A
OD2
HE
ASP
ARG
64
133
1.56
11
A
A
OD2
HH22
ASP
ARG
138
166
1.58
11
A
A
H
O
ASP
ILE
64
68
1.58
11
A
A
O
H
THR
ARG
119
136
1.59
12
A
A
H
O
ILE
SER
135
170
1.57
12
A
A
OD1
HH11
ASP
ARG
64
133
1.59
13
A
A
H
O
ILE
SER
135
170
1.54
13
A
A
O
H
GLY
HIS
148
160
1.55
13
A
A
H
O
LEU
LEU
62
72
1.59
13
A
A
O
H
THR
ARG
119
136
1.60
14
A
A
O
HG
SER
SER
127
128
1.39
14
A
A
OD2
HE
ASP
ARG
64
133
1.53
14
A
A
H
O
THR
ARG
119
136
1.54
14
A
A
H
O
LEU
LEU
62
72
1.56
14
A
A
H
O
ILE
SER
135
170
1.58
15
A
A
O
H
GLY
HIS
148
160
1.54
15
A
A
HD22
O
ASN
GLY
14
29
1.57
16
A
A
O
H
HIS
VAL
31
34
1.56
16
A
A
H
O
ILE
SER
135
170
1.57
17
A
A
O
HG
LEU
SER
126
127
1.46
18
A
A
O
H
THR
ARG
119
136
1.58
18
A
A
H
O
ASP
ILE
64
68
1.60
19
A
A
O
HG
LEU
SER
126
127
1.49
19
A
A
H
O
ILE
SER
135
170
1.56
19
A
A
O
H
GLY
HIS
148
160
1.57
20
A
A
O
HG
LEU
SER
126
127
1.44
9
A
ARG
133
0.081
SIDE CHAIN
10
A
ARG
33
0.089
SIDE CHAIN
15
A
ARG
166
0.074
SIDE CHAIN
16
A
ARG
55
0.091
SIDE CHAIN
1
A
ASP
32
52.06
-89.21
1
A
GLN
42
61.12
69.07
1
A
ASN
67
39.99
61.98
1
A
GLU
71
80.61
7.89
1
A
GLU
95
55.75
13.48
1
A
ASN
110
69.39
70.40
1
A
TYR
139
-163.06
114.70
1
A
THR
143
-45.03
155.68
2
A
ASP
32
55.12
-90.89
2
A
HIS
40
-68.42
4.02
2
A
GLN
42
57.99
70.97
2
A
PRO
65
-55.88
-5.16
2
A
LEU
94
-74.82
-80.78
2
A
GLU
95
45.26
71.38
2
A
SER
105
-121.63
-163.91
2
A
ASN
110
74.44
71.87
2
A
SER
128
81.41
0.58
2
A
ALA
140
-69.85
90.66
2
A
THR
143
-44.30
158.92
3
A
THR
20
-118.05
-162.95
3
A
ASP
32
44.99
-101.37
3
A
GLN
42
62.51
71.38
3
A
ASP
58
-171.96
132.23
3
A
PRO
65
-48.00
-10.21
3
A
LEU
94
-100.07
-68.09
3
A
GLU
95
41.70
73.87
3
A
SER
105
-109.77
-160.67
3
A
SER
128
85.65
-3.68
3
A
TYR
139
-178.42
133.75
3
A
THR
143
-43.30
161.46
4
A
THR
20
-146.40
-157.55
4
A
ASP
32
58.36
-88.07
4
A
GLN
42
56.31
71.96
4
A
LEU
94
-60.75
-72.23
4
A
ASN
110
66.73
73.36
4
A
ALA
121
-90.07
-66.24
4
A
THR
143
-43.10
150.25
4
B
GLU
3
-114.59
71.85
5
A
ASP
32
57.18
-88.74
5
A
GLN
42
60.58
72.83
5
A
ASN
67
71.76
72.52
5
A
GLU
71
71.62
31.14
5
A
ASN
110
77.24
72.45
5
A
TYR
139
-176.12
133.19
5
A
THR
143
-42.24
158.72
6
A
ASP
32
51.65
-90.49
6
A
ARG
33
-140.15
16.36
6
A
GLN
42
62.44
73.23
6
A
GLU
71
84.07
22.00
6
A
ASP
85
-60.64
90.26
6
A
ILE
86
-96.27
32.03
6
A
LEU
94
-74.47
-81.10
6
A
GLU
95
33.32
74.08
6
A
SER
105
-129.57
-164.56
6
A
ASN
107
-90.52
-66.02
6
A
SER
128
83.37
2.34
6
A
ASP
138
-68.20
96.71
6
A
TYR
139
-175.09
121.25
6
A
THR
143
-44.08
150.20
6
B
GLU
3
-110.99
78.94
7
A
ASP
32
40.99
-84.70
7
A
ARG
33
-143.92
21.51
7
A
GLN
42
53.68
70.30
7
A
ASN
67
80.43
3.36
7
A
LEU
94
-66.98
-71.19
7
A
GLU
95
59.23
70.88
7
A
SER
105
-135.89
-159.08
7
A
SER
128
82.76
1.60
7
A
TYR
139
-171.89
127.27
7
A
THR
143
-41.37
152.99
8
A
ASP
32
44.70
-90.02
8
A
GLN
42
60.25
70.72
8
A
ASN
50
56.70
12.57
8
A
PRO
65
-45.71
-10.54
8
A
ASP
85
-67.42
81.56
8
A
LEU
94
-65.23
-73.16
8
A
HIS
104
-141.19
49.38
8
A
SER
105
-106.49
-163.15
8
A
ASN
110
58.97
72.33
8
A
ILE
124
-133.16
-159.25
8
A
SER
128
87.18
7.85
8
A
THR
143
-45.35
152.30
8
A
THR
153
-64.17
98.31
9
A
LYS
13
-98.59
-61.63
9
A
THR
20
-105.74
-163.48
9
A
ASP
32
46.78
-86.26
9
A
GLN
42
65.22
72.15
9
A
PRO
65
-52.59
-8.16
9
A
GLU
95
36.61
71.80
9
A
SER
105
-108.90
-161.18
9
A
ASN
107
-78.01
-76.69
9
A
ASN
110
80.82
-2.20
9
A
SER
128
81.84
-10.46
9
A
THR
143
-37.60
150.20
9
A
LYS
175
-35.71
-36.23
10
A
ASP
32
54.02
-94.27
10
A
HIS
40
-69.06
9.41
10
A
GLN
42
61.37
72.90
10
A
ASN
50
70.75
-9.57
10
A
ASP
58
-171.48
147.83
10
A
ASN
67
71.65
66.27
10
A
GLU
95
38.20
72.00
10
A
HIS
104
-150.49
71.96
10
A
SER
105
-143.16
-150.32
10
A
SER
128
74.18
-0.07
10
A
TYR
139
-174.08
137.96
10
A
ALA
140
-62.38
96.20
10
A
THR
143
-42.48
152.10
10
A
LYS
155
-162.66
113.75
11
A
ASP
32
56.25
-94.36
11
A
ARG
33
-143.52
20.25
11
A
GLN
42
48.27
72.10
11
A
ASN
67
64.02
68.36
11
A
LEU
94
-56.34
-71.36
11
A
SER
105
-124.24
-162.68
11
A
ASN
110
38.61
62.90
11
A
SER
128
82.99
66.66
11
A
PRO
130
-58.35
109.96
11
A
TYR
139
-178.20
119.93
11
A
THR
143
-38.91
155.47
11
B
GLU
3
-108.07
76.37
12
A
THR
20
-109.27
-163.57
12
A
ASP
32
45.97
-92.30
12
A
ARG
33
-142.55
19.87
12
A
GLN
42
68.01
72.87
12
A
PRO
65
-49.61
-18.49
12
A
ASP
85
-68.56
95.16
12
A
LEU
94
-75.66
-71.49
12
A
GLU
95
49.47
72.16
12
A
SER
105
-118.40
-166.98
12
A
ASN
110
70.40
34.54
12
A
TYR
139
-171.49
134.28
12
A
THR
143
-37.58
158.83
13
A
HIS
31
-171.88
146.78
13
A
ASP
32
50.28
-86.60
13
A
GLN
42
55.71
72.50
13
A
ASN
50
45.74
28.36
13
A
ASN
67
73.11
30.97
13
A
GLU
95
56.57
70.87
13
A
HIS
104
-146.36
59.62
13
A
ASN
110
64.01
71.80
13
A
SER
128
86.10
-11.24
13
A
TYR
139
-179.71
132.05
13
A
THR
143
-42.18
153.68
13
B
GLU
3
-109.99
74.21
14
A
HIS
31
-171.95
149.17
14
A
ASP
32
54.06
-87.47
14
A
GLN
42
59.14
71.64
14
A
ASN
67
64.06
68.18
14
A
ASP
85
-59.86
86.07
14
A
LEU
94
-64.72
-76.47
14
A
GLU
95
51.43
70.82
14
A
ASN
110
76.29
74.48
14
A
SER
128
80.16
1.23
14
A
TYR
139
-171.02
127.90
14
A
THR
143
-40.59
161.85
15
A
ASN
14
-145.80
-38.32
15
A
ASP
32
56.89
-78.35
15
A
GLN
42
50.10
72.83
15
A
ASN
50
73.82
-10.10
15
A
PRO
65
-43.72
-17.13
15
A
GLU
95
47.04
71.68
15
A
ASN
110
60.55
70.83
15
A
TYR
139
-170.11
126.16
15
A
THR
143
-38.86
156.93
15
A
LYS
175
-39.67
-39.96
16
A
ASP
32
43.72
-92.34
16
A
GLN
42
68.41
72.32
16
A
ASN
67
63.76
61.59
16
A
ASP
85
-66.57
99.46
16
A
LEU
94
-103.40
-68.61
16
A
VAL
97
-73.50
20.99
16
A
SER
105
-109.51
-162.44
16
A
ASN
110
79.18
72.42
16
A
THR
119
-160.21
114.89
16
A
SER
128
82.10
-1.55
16
A
THR
143
-44.03
152.61
16
A
PHE
157
-103.06
-71.21
16
B
GLU
3
-119.43
78.05
17
A
ASP
32
51.71
-91.83
17
A
ASN
67
60.75
62.06
17
A
GLU
71
85.96
7.26
17
A
LEU
94
-90.57
-78.82
17
A
GLU
95
49.70
70.31
17
A
HIS
104
-145.71
41.65
17
A
SER
105
-108.35
-164.90
17
A
ASN
110
66.43
71.47
17
A
SER
128
85.67
0.52
17
A
TYR
139
-175.06
129.84
17
A
ALA
140
-69.13
96.04
17
A
THR
143
-41.19
153.73
18
A
HIS
31
-171.83
149.93
18
A
ASP
32
46.49
-95.27
18
A
GLN
42
56.90
70.18
18
A
ASN
67
60.65
64.12
18
A
GLU
71
85.81
7.94
18
A
GLU
95
46.58
71.79
18
A
SER
128
84.31
-10.49
18
A
THR
143
-38.77
150.00
18
A
THR
153
-55.44
107.98
18
B
GLU
3
-118.22
77.11
19
A
ASP
32
57.32
-94.23
19
A
GLN
42
64.98
69.51
19
A
GLU
71
80.70
9.03
19
A
ASP
85
-69.94
80.93
19
A
GLU
95
60.70
69.25
19
A
SER
105
-108.78
-165.42
19
A
ASN
110
74.03
70.45
19
A
SER
128
70.56
62.49
19
A
THR
129
-160.80
115.27
19
A
ARG
133
70.88
34.82
19
A
THR
143
-44.22
154.22
20
A
THR
20
-102.81
-169.73
20
A
ASP
32
45.14
-92.20
20
A
ARG
33
-141.59
25.75
20
A
GLN
42
66.61
70.95
20
A
PRO
65
-44.72
-17.62
20
A
ASN
67
72.21
30.21
20
A
GLU
71
87.13
4.35
20
A
ASP
85
-66.26
91.55
20
A
LEU
94
-55.62
-70.18
20
A
GLU
95
50.61
71.27
20
A
ASN
110
73.36
72.20
20
A
PRO
117
-58.02
107.29
20
A
ALA
140
-66.30
99.41
20
A
THR
143
-38.70
150.75
NMR Structure of the Human Rhinovirus 3C Protease (serotype 14) with covalently bound Ace-LEALFQ-ethylpropionate inhibitor
1
N
N
2
N
N
A
GLY
1
A
GLY
1
HELX_P
A
ASN
14
A
ASN
14
1
1
14
A
ASP
85
A
ASP
85
HELX_P
A
ILE
90
A
ILE
90
5
2
6
A
LYS
174
A
LYS
174
HELX_P
A
VAL
179
A
VAL
179
1
3
6
covale
1.820
one
A
CYS
146
A
SG
CYS
146
1_555
B
YTF
7
B
C
YTF
7
1_555
covale
1.317
both
B
ACE
1
B
C
ACE
1
1_555
B
LEU
2
B
N
LEU
2
1_555
covale
1.328
both
B
PHE
6
B
C
PHE
6
1_555
B
YTF
7
B
N
YTF
7
1_555
HYDROLASE/HYDROLASE INHIBITOR
BETA BARREL, HYDROLASE-HYDROLASE INHIBITOR COMPLEX
POLG_HRV14
UNP
1
1538
P03303
GPNTEFALSLLRKNIMTITTSKGEFTGLGIHDRVCVIPTHAQPGDDVLVNGQKIRVKDKYKLVDPENINLELTVLTLDRN
EKFRDIRGFISEDLEGVDATLVVHSNNFTNTILEVGPVTMAGLINLSSTPTNRMIRYDYATKTGQCGGVLCATGKIFGIH
VGGNGRQGFSAQLKKQYFVEKQ
2B0F
PDB
2
1
2B0F
1538
1719
2B0F
1
182
P03303
A
1
1
182
1
7
2B0F
1
7
2B0F
B
2
1
7
7
10
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
15
A
ILE
15
A
THR
19
A
THR
19
A
GLU
24
A
GLU
24
A
HIS
31
A
HIS
31
A
VAL
34
A
VAL
34
A
ILE
37
A
ILE
37
A
ILE
68
A
ILE
68
A
ASP
78
A
ASP
78
A
GLN
52
A
GLN
52
A
ASP
64
A
ASP
64
A
ASP
46
A
ASP
46
A
VAL
49
A
VAL
49
A
ILE
15
A
ILE
15
A
THR
19
A
THR
19
A
THR
111
A
THR
111
A
LEU
126
A
LEU
126
A
PRO
130
A
PRO
130
A
ASP
138
A
ASP
138
A
GLN
167
A
GLN
167
A
GLN
172
A
GLN
172
A
LYS
155
A
LYS
155
A
ASN
164
A
ASN
164
A
THR
111
A
THR
111
A
LEU
126
A
LEU
126
A
ASP
98
A
ASP
98
A
VAL
103
A
VAL
103
A
VAL
149
A
VAL
149
A
ALA
152
A
ALA
152
A
LYS
155
A
LYS
155
A
ASN
164
A
ASN
164
B
GLU
3
B
GLU
3
B
PHE
6
B
PHE
6
A
LYS
155
A
LYS
155
A
ASN
164
A
ASN
164
BINDING SITE FOR CHAIN B OF ACE-LEALFQ-ETHYLPROPIONATE
Software
19
A
LYS
22
A
LYS
22
19
1_555
A
HIS
40
A
HIS
40
19
1_555
A
GLU
71
A
GLU
71
19
1_555
A
ILE
124
A
ILE
124
19
1_555
A
ASN
125
A
ASN
125
19
1_555
A
LEU
126
A
LEU
126
19
1_555
A
SER
127
A
SER
127
19
1_555
A
SER
128
A
SER
128
19
1_555
A
THR
141
A
THR
141
19
1_555
A
LYS
142
A
LYS
142
19
1_555
A
THR
143
A
THR
143
19
1_555
A
GLY
144
A
GLY
144
19
1_555
A
CYS
146
A
CYS
146
19
1_555
A
HIS
160
A
HIS
160
19
1_555
A
VAL
161
A
VAL
161
19
1_555
A
GLY
162
A
GLY
162
19
1_555
A
GLY
163
A
GLY
163
19
1_555
A
ASN
164
A
ASN
164
19
1_555
A
PHE
169
A
PHE
169
19
1_555
1
P 1