1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Schein, C.H. Oezguen, N. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Peptides 0196-9781 27 1676 1684 10.1016/j.peptides.2006.01.018 16540201 NMR structure of the viral peptide linked to the genome (VPg) of poliovirus. 2006 US Proteins PSFGEY 0867 1097-0134 10.1002/prot.20891 16498624 Novel, structure-based mechanism for uridylylation of the genome-linked peptide (VPg) of picornaviruses 2006 10.2210/pdb2bbp/pdb pdb_00002bbp 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 2357.749 Genome linked protein VPg residues 1-22 1 syn polymer no no GAYTGLPNKKPNVPTIRTAKVQ GAYTGLPNKKPNVPTIRTAKVQ A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n database_2 pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2006-03-28 1 1 2008-05-01 1 2 2011-07-13 1 3 2022-03-09 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name NMR structures of the peptide linked to the genome (VPg) of poliovirus in a stabilizing solvent RCSB Y RCSB 2005-10-17 REL REL This sequence occurs naturally in human poliovirus serotype 1. sample target function 50 10 2D NOESY 2D TOCSY 10 mM 7.2 1 atm 283 K Refinement of the NOE assignment is performed iteratively. NOAH passes geometrical constraints derived from the NOE list to DIAMOD. DIAMOD calculates a bundle of structures with least violation of the constraints. The new bundle of structures is the basis for refinement of the assignments in NOAH. automatic NOE assignment in combination with distance geometry 1 fewest violations 3.7 mM peptide, 10 mM Na phosphate buffer, pH 7.2, DSS, 10% D20, 90% H2O 10% D20, 90% H2O Mumenthaler, C. et al. structure solution NOAH 2.0 Guentert, P. et al. structure solution DIAMOD 2.2 Accelerys data analysis Felix Guentert, P. et al. refinement DIAMOD 2.2 600 Varian UNITYPLUS 750 Varian UNITYPLUS GLY 1 n 1 GLY 1 A ALA 2 n 2 ALA 2 A TYR 3 n 3 TYR 3 A THR 4 n 4 THR 4 A GLY 5 n 5 GLY 5 A LEU 6 n 6 LEU 6 A PRO 7 n 7 PRO 7 A ASN 8 n 8 ASN 8 A LYS 9 n 9 LYS 9 A LYS 10 n 10 LYS 10 A PRO 11 n 11 PRO 11 A ASN 12 n 12 ASN 12 A VAL 13 n 13 VAL 13 A PRO 14 n 14 PRO 14 A THR 15 n 15 THR 15 A ILE 16 n 16 ILE 16 A ARG 17 n 17 ARG 17 A THR 18 n 18 THR 18 A ALA 19 n 19 ALA 19 A LYS 20 n 20 LYS 20 A VAL 21 n 21 VAL 21 A GLN 22 n 22 GLN 22 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A ALA 2 -157.39 -61.18 1 A TYR 3 49.36 91.49 1 A ASN 8 -167.26 -46.92 1 A LYS 9 -173.34 143.06 1 A LYS 10 -17.75 96.67 1 A PRO 11 -74.97 -73.54 1 A THR 15 -154.80 86.61 1 A ARG 17 34.94 73.51 1 A THR 18 -150.36 -36.06 2 A TYR 3 12.45 90.23 2 A THR 4 -112.15 73.26 2 A ASN 8 -166.83 -47.36 2 A LYS 10 -22.18 98.04 2 A PRO 11 -74.95 -71.37 2 A THR 15 -150.77 86.53 2 A THR 18 -143.88 -35.68 3 A TYR 3 49.01 76.01 3 A ASN 8 -168.26 -46.15 3 A LYS 10 -23.18 98.14 3 A ASN 12 -170.51 -43.84 3 A THR 15 55.56 79.13 3 A ILE 16 39.10 45.61 3 A ARG 17 37.08 70.53 3 A THR 18 -148.83 -25.54 4 A ALA 2 -163.05 -51.68 4 A TYR 3 52.09 91.93 4 A ASN 8 -169.29 -47.00 4 A LYS 10 -21.86 98.37 4 A PRO 11 -75.05 -70.26 4 A THR 15 -154.30 86.50 4 A ARG 17 39.52 65.06 4 A THR 18 -140.91 -36.30 5 A TYR 3 44.50 88.66 5 A ASN 8 -168.69 -48.15 5 A LYS 10 -21.61 97.90 5 A PRO 11 -75.01 -72.20 5 A THR 18 -143.65 -37.93 5 A LYS 20 -130.06 -98.89 5 A VAL 21 -159.71 -58.76 6 A TYR 3 175.84 53.46 6 A THR 4 -106.35 77.22 6 A ASN 8 -168.31 -48.99 6 A LYS 10 -20.30 98.45 6 A PRO 11 -74.93 -70.21 6 A LYS 20 -116.07 73.92 7 A ALA 2 68.19 115.92 7 A TYR 3 -173.11 -27.31 7 A LEU 6 -149.64 40.73 7 A ASN 8 -167.58 -32.81 7 A LYS 10 -29.87 101.36 8 A TYR 3 48.50 86.50 8 A LEU 6 36.26 57.15 8 A ASN 8 -169.00 -54.06 8 A LYS 9 178.03 140.18 8 A LYS 10 -10.42 90.41 8 A THR 15 -150.06 85.91 8 A THR 18 -145.75 -37.62 9 A ALA 2 68.34 115.86 9 A TYR 3 -173.13 -27.29 9 A LEU 6 -149.65 40.83 9 A ASN 8 -167.54 -32.82 9 A LYS 10 -29.80 101.34 10 A TYR 3 48.50 86.49 10 A LEU 6 36.29 57.14 10 A ASN 8 -169.09 -54.04 10 A LYS 9 178.06 140.20 10 A LYS 10 -10.47 90.44 10 A THR 15 -150.03 85.98 10 A THR 18 -145.74 -37.55 NMR structures of the peptide linked to the genome (VPg) of poliovirus 1 N N VIRAL PROTEIN VPg, RNA transcription primer, flexible structure, viral polymerase, picornavirus, VIRAL PROTEIN POLG_POL1M UNP 1 1544 P03300 GAYTGLPNKKPNVPTIRTAKVQ 1544 1565 2BBP 1 22 P03300 A 1 1 22 1 P 1