0.017126 0.000000 0.000000 0.000000 0.017126 0.000000 0.000000 0.000000 0.006141 0.00000 0.00000 0.00000 Pichler, A. Knipscheer, P. Oberhofer, E. Van Dijk, W.J. Korner, R. Velgaard Olsen, J. Jentsch, S. Melchior, F. Sixma, T.K. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 58.391 58.391 162.842 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C N 377 N C N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing US Nat.Struct.Mol.Biol. 1545-9993 12 264 10.1038/NSMB903 15723079 Sumo Imodification of the Ubiquitin Conjugating Enzyme E2-25K 2005 10.2210/pdb2bf8/pdb pdb_00002bf8 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 TOROIDAL MIRROR 2003-09-07 ADSC ADSC Q4R DOUBLE CRYSTAL, SI(111), SI(311) SINGLE WAVELENGTH M x-ray 1 0.939 1.0 ID14-4 ESRF 0.939 SYNCHROTRON ESRF BEAMLINE ID14-4 COVALENT ISOPEPTIDE LINK BETWEEN E2-25K LYSINE 14 AND SUMO C-TERMINUS 17846.412 UBIQUITIN-CONJUGATING ENZYME E2-25 KDA 6.3.2.19 CONSERVED CORE DOMAIN, RESIDUES 1-154 1 man polymer COVALENT ISOPEPTIDE LINK BETWEEN E2-25K LYSINE 14 AND SUMO C-TERMINUS 8970.248 UBIQUITIN-LIKE PROTEIN SMT3C RESIDUES 21-97 1 man polymer 18.015 water 83 nat water E2-25K, UBIQUITIN-PROTEIN LIGASE, UBIQUITIN CARRIER PROTEIN, E2(25K), HUNTINGTIN INTERACTING PROTEIN 2, HIP-2 SUMO, UBIQUITIN-HOMOLOGY DOMAIN PROTEIN PIC1, UBIQUITIN-LIKE PROTEIN UBL1, UBIQUITIN-RELATED PROTEIN SUMO-1, GAP MODIFYING PROTEIN 1, GMP1, SENTRIN no no GAMAMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFI TKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA GAMAMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFI TKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA A polypeptide(L) no no YIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGG YIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGG B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n BOVINE sample 9913 BOS TAURUS 469008 ESCHERICHIA COLI BL21(DE3) PETM30 HUMAN sample 9606 HOMO SAPIENS 469008 ESCHERICHIA COLI BL21(DE3) PET11A 20 2.4 48.2 8.50 100 MM TRIS PH 8.5 200 MM MAGNESIUM CHLORIDE 17% PEG 4000 10 % GLYCEROL chem_comp_atom chem_comp_bond database_2 pdbx_database_status pdbx_initial_refinement_model repository Initial release Advisory Version format compliance Data collection Database references Other Refinement description 1 0 2005-02-16 1 1 2011-07-13 1 2 2023-12-13 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_sf STRUCTURE DETERMINATION OF THE SMALL UBIQUITIN -RELATED MODIFIER SUMO-1, NMR, 10 STRUCTURES STRUCTURE OF HUMAN SENP2 IN COMPLEX WITH SUMO-1 CRYSTAL STRUCTURE OF UBIQUITIN CONJUGATING ENZYME E2-25K PDBE Y PDBE 2004-12-06 REL REL HOH water COVALENT ISOPEPTIDE BOND BETWEEN E2-25K LYSINE 14 AND SUMO C-TERMINUS 1FZY PDB ENTRY 1FZY PDB experimental model HOH 2001 3 HOH HOH 2001 A HOH 2002 3 HOH HOH 2002 A HOH 2003 3 HOH HOH 2003 A HOH 2004 3 HOH HOH 2004 A HOH 2005 3 HOH HOH 2005 A HOH 2006 3 HOH HOH 2006 A HOH 2007 3 HOH HOH 2007 A HOH 2008 3 HOH HOH 2008 A HOH 2009 3 HOH HOH 2009 A HOH 2010 3 HOH HOH 2010 A HOH 2011 3 HOH HOH 2011 A HOH 2012 3 HOH HOH 2012 A HOH 2013 3 HOH HOH 2013 A HOH 2014 3 HOH HOH 2014 A HOH 2015 3 HOH HOH 2015 A HOH 2016 3 HOH HOH 2016 A HOH 2017 3 HOH HOH 2017 A HOH 2018 3 HOH HOH 2018 A HOH 2019 3 HOH HOH 2019 A HOH 2020 3 HOH HOH 2020 A HOH 2021 3 HOH HOH 2021 A HOH 2022 3 HOH HOH 2022 A HOH 2023 3 HOH HOH 2023 A HOH 2024 3 HOH HOH 2024 A HOH 2025 3 HOH HOH 2025 A HOH 2026 3 HOH HOH 2026 A HOH 2027 3 HOH HOH 2027 A HOH 2028 3 HOH HOH 2028 A HOH 2029 3 HOH HOH 2029 A HOH 2030 3 HOH HOH 2030 A HOH 2031 3 HOH HOH 2031 A HOH 2032 3 HOH HOH 2032 A HOH 2033 3 HOH HOH 2033 A HOH 2034 3 HOH HOH 2034 A HOH 2035 3 HOH HOH 2035 A HOH 2036 3 HOH HOH 2036 A HOH 2037 3 HOH HOH 2037 A HOH 2038 3 HOH HOH 2038 A HOH 2039 3 HOH HOH 2039 A HOH 2040 3 HOH HOH 2040 A HOH 2041 3 HOH HOH 2041 A HOH 2042 3 HOH HOH 2042 A HOH 2043 3 HOH HOH 2043 A HOH 2044 3 HOH HOH 2044 A HOH 2045 3 HOH HOH 2045 A HOH 2046 3 HOH HOH 2046 A HOH 2047 3 HOH HOH 2047 A HOH 2048 3 HOH HOH 2048 A HOH 2049 3 HOH HOH 2049 A HOH 2050 3 HOH HOH 2050 A HOH 2051 3 HOH HOH 2051 A HOH 2052 3 HOH HOH 2052 A HOH 2053 3 HOH HOH 2053 A HOH 2054 3 HOH HOH 2054 A HOH 2055 3 HOH HOH 2055 A HOH 2056 3 HOH HOH 2056 A HOH 2057 3 HOH HOH 2057 A HOH 2058 3 HOH HOH 2058 A HOH 2059 3 HOH HOH 2059 A HOH 2060 3 HOH HOH 2060 A HOH 2061 3 HOH HOH 2061 A HOH 2062 3 HOH HOH 2062 A HOH 2063 3 HOH HOH 2063 A HOH 2064 3 HOH HOH 2064 A HOH 2065 3 HOH HOH 2065 A HOH 2066 3 HOH HOH 2066 A HOH 2067 3 HOH HOH 2067 A HOH 2068 3 HOH HOH 2068 A HOH 2069 3 HOH HOH 2069 A HOH 2070 3 HOH HOH 2070 A HOH 2001 3 HOH HOH 2001 B HOH 2002 3 HOH HOH 2002 B HOH 2003 3 HOH HOH 2003 B HOH 2004 3 HOH HOH 2004 B HOH 2005 3 HOH HOH 2005 B HOH 2006 3 HOH HOH 2006 B HOH 2007 3 HOH HOH 2007 B HOH 2008 3 HOH HOH 2008 B HOH 2009 3 HOH HOH 2009 B HOH 2010 3 HOH HOH 2010 B HOH 2011 3 HOH HOH 2011 B HOH 2012 3 HOH HOH 2012 B HOH 2013 3 HOH HOH 2013 B n 1 -3 A n 2 -2 A n 3 -1 A n 4 0 A n 5 1 A ALA 2 n 6 ALA 2 A ASN 3 n 7 ASN 3 A ILE 4 n 8 ILE 4 A ALA 5 n 9 ALA 5 A VAL 6 n 10 VAL 6 A GLN 7 n 11 GLN 7 A ARG 8 n 12 ARG 8 A ILE 9 n 13 ILE 9 A LYS 10 n 14 LYS 10 A ARG 11 n 15 ARG 11 A GLU 12 n 16 GLU 12 A PHE 13 n 17 PHE 13 A LYS 14 n 18 LYS 14 A GLU 15 n 19 GLU 15 A VAL 16 n 20 VAL 16 A LEU 17 n 21 LEU 17 A LYS 18 n 22 LYS 18 A SER 19 n 23 SER 19 A GLU 20 n 24 GLU 20 A GLU 21 n 25 GLU 21 A THR 22 n 26 THR 22 A SER 23 n 27 SER 23 A LYS 24 n 28 LYS 24 A ASN 25 n 29 ASN 25 A GLN 26 n 30 GLN 26 A ILE 27 n 31 ILE 27 A LYS 28 n 32 LYS 28 A VAL 29 n 33 VAL 29 A ASP 30 n 34 ASP 30 A LEU 31 n 35 LEU 31 A VAL 32 n 36 VAL 32 A ASP 33 n 37 ASP 33 A GLU 34 n 38 GLU 34 A ASN 35 n 39 ASN 35 A PHE 36 n 40 PHE 36 A THR 37 n 41 THR 37 A GLU 38 n 42 GLU 38 A LEU 39 n 43 LEU 39 A ARG 40 n 44 ARG 40 A GLY 41 n 45 GLY 41 A GLU 42 n 46 GLU 42 A ILE 43 n 47 ILE 43 A ALA 44 n 48 ALA 44 A GLY 45 n 49 GLY 45 A PRO 46 n 50 PRO 46 A PRO 47 n 51 PRO 47 A ASP 48 n 52 ASP 48 A THR 49 n 53 THR 49 A PRO 50 n 54 PRO 50 A TYR 51 n 55 TYR 51 A GLU 52 n 56 GLU 52 A GLY 53 n 57 GLY 53 A GLY 54 n 58 GLY 54 A ARG 55 n 59 ARG 55 A TYR 56 n 60 TYR 56 A GLN 57 n 61 GLN 57 A LEU 58 n 62 LEU 58 A GLU 59 n 63 GLU 59 A ILE 60 n 64 ILE 60 A LYS 61 n 65 LYS 61 A ILE 62 n 66 ILE 62 A PRO 63 n 67 PRO 63 A GLU 64 n 68 GLU 64 A THR 65 n 69 THR 65 A TYR 66 n 70 TYR 66 A PRO 67 n 71 PRO 67 A PHE 68 n 72 PHE 68 A ASN 69 n 73 ASN 69 A PRO 70 n 74 PRO 70 A PRO 71 n 75 PRO 71 A LYS 72 n 76 LYS 72 A VAL 73 n 77 VAL 73 A ARG 74 n 78 ARG 74 A PHE 75 n 79 PHE 75 A ILE 76 n 80 ILE 76 A THR 77 n 81 THR 77 A LYS 78 n 82 LYS 78 A ILE 79 n 83 ILE 79 A TRP 80 n 84 TRP 80 A HIS 81 n 85 HIS 81 A PRO 82 n 86 PRO 82 A ASN 83 n 87 ASN 83 A ILE 84 n 88 ILE 84 A SER 85 n 89 SER 85 A SER 86 n 90 SER 86 A VAL 87 n 91 VAL 87 A THR 88 n 92 THR 88 A GLY 89 n 93 GLY 89 A ALA 90 n 94 ALA 90 A ILE 91 n 95 ILE 91 A CYS 92 n 96 CYS 92 A LEU 93 n 97 LEU 93 A ASP 94 n 98 ASP 94 A ILE 95 n 99 ILE 95 A LEU 96 n 100 LEU 96 A LYS 97 n 101 LYS 97 A ASP 98 n 102 ASP 98 A GLN 99 n 103 GLN 99 A TRP 100 n 104 TRP 100 A ALA 101 n 105 ALA 101 A ALA 102 n 106 ALA 102 A ALA 103 n 107 ALA 103 A MET 104 n 108 MET 104 A THR 105 n 109 THR 105 A LEU 106 n 110 LEU 106 A ARG 107 n 111 ARG 107 A THR 108 n 112 THR 108 A VAL 109 n 113 VAL 109 A LEU 110 n 114 LEU 110 A LEU 111 n 115 LEU 111 A SER 112 n 116 SER 112 A LEU 113 n 117 LEU 113 A GLN 114 n 118 GLN 114 A ALA 115 n 119 ALA 115 A LEU 116 n 120 LEU 116 A LEU 117 n 121 LEU 117 A ALA 118 n 122 ALA 118 A ALA 119 n 123 ALA 119 A ALA 120 n 124 ALA 120 A GLU 121 n 125 GLU 121 A PRO 122 n 126 PRO 122 A ASP 123 n 127 ASP 123 A ASP 124 n 128 ASP 124 A PRO 125 n 129 PRO 125 A GLN 126 n 130 GLN 126 A ASP 127 n 131 ASP 127 A ALA 128 n 132 ALA 128 A VAL 129 n 133 VAL 129 A VAL 130 n 134 VAL 130 A ALA 131 n 135 ALA 131 A ASN 132 n 136 ASN 132 A GLN 133 n 137 GLN 133 A TYR 134 n 138 TYR 134 A LYS 135 n 139 LYS 135 A GLN 136 n 140 GLN 136 A ASN 137 n 141 ASN 137 A PRO 138 n 142 PRO 138 A GLU 139 n 143 GLU 139 A MET 140 n 144 MET 140 A PHE 141 n 145 PHE 141 A LYS 142 n 146 LYS 142 A GLN 143 n 147 GLN 143 A THR 144 n 148 THR 144 A ALA 145 n 149 ALA 145 A ARG 146 n 150 ARG 146 A LEU 147 n 151 LEU 147 A TRP 148 n 152 TRP 148 A ALA 149 n 153 ALA 149 A HIS 150 n 154 HIS 150 A VAL 151 n 155 VAL 151 A TYR 152 n 156 TYR 152 A ALA 153 n 157 ALA 153 A GLY 154 n 158 GLY 154 A ALA 155 n 159 ALA 155 A TYR 21 n 1 TYR 21 B ILE 22 n 2 ILE 22 B LYS 23 n 3 LYS 23 B LEU 24 n 4 LEU 24 B LYS 25 n 5 LYS 25 B VAL 26 n 6 VAL 26 B ILE 27 n 7 ILE 27 B GLY 28 n 8 GLY 28 B GLN 29 n 9 GLN 29 B ASP 30 n 10 ASP 30 B SER 31 n 11 SER 31 B SER 32 n 12 SER 32 B GLU 33 n 13 GLU 33 B ILE 34 n 14 ILE 34 B HIS 35 n 15 HIS 35 B PHE 36 n 16 PHE 36 B LYS 37 n 17 LYS 37 B VAL 38 n 18 VAL 38 B LYS 39 n 19 LYS 39 B MET 40 n 20 MET 40 B THR 41 n 21 THR 41 B THR 42 n 22 THR 42 B HIS 43 n 23 HIS 43 B LEU 44 n 24 LEU 44 B LYS 45 n 25 LYS 45 B LYS 46 n 26 LYS 46 B LEU 47 n 27 LEU 47 B LYS 48 n 28 LYS 48 B GLU 49 n 29 GLU 49 B SER 50 n 30 SER 50 B TYR 51 n 31 TYR 51 B CYS 52 n 32 CYS 52 B GLN 53 n 33 GLN 53 B ARG 54 n 34 ARG 54 B GLN 55 n 35 GLN 55 B GLY 56 n 36 GLY 56 B VAL 57 n 37 VAL 57 B PRO 58 n 38 PRO 58 B MET 59 n 39 MET 59 B ASN 60 n 40 ASN 60 B SER 61 n 41 SER 61 B LEU 62 n 42 LEU 62 B ARG 63 n 43 ARG 63 B PHE 64 n 44 PHE 64 B LEU 65 n 45 LEU 65 B PHE 66 n 46 PHE 66 B GLU 67 n 47 GLU 67 B GLY 68 n 48 GLY 68 B GLN 69 n 49 GLN 69 B ARG 70 n 50 ARG 70 B ILE 71 n 51 ILE 71 B ALA 72 n 52 ALA 72 B ASP 73 n 53 ASP 73 B ASN 74 n 54 ASN 74 B HIS 75 n 55 HIS 75 B THR 76 n 56 THR 76 B PRO 77 n 57 PRO 77 B LYS 78 n 58 LYS 78 B GLU 79 n 59 GLU 79 B LEU 80 n 60 LEU 80 B GLY 81 n 61 GLY 81 B MET 82 n 62 MET 82 B GLU 83 n 63 GLU 83 B GLU 84 n 64 GLU 84 B GLU 85 n 65 GLU 85 B ASP 86 n 66 ASP 86 B VAL 87 n 67 VAL 87 B ILE 88 n 68 ILE 88 B GLU 89 n 69 GLU 89 B VAL 90 n 70 VAL 90 B TYR 91 n 71 TYR 91 B GLN 92 n 72 GLN 92 B GLU 93 n 73 GLU 93 B GLN 94 n 74 GLN 94 B THR 95 n 75 THR 95 B GLY 96 n 76 GLY 96 B GLY 97 n 77 GLY 97 B 3.5484 -1.0822 -1.9575 9.4825 2.9418 3.3554 0.0625 -0.0756 -0.0922 0.4331 -0.1307 -0.7976 0.3162 -0.1059 0.0682 -0.1357 -0.1081 0.0391 -0.2368 -0.0434 -0.2961 refined 40.1950 17.7830 69.7720 X-RAY DIFFRACTION 4.7404 -4.0568 -2.5666 9.4991 0.2981 8.4715 0.7684 1.0786 1.1827 -0.7803 -0.4570 -0.4250 -1.6759 -0.7391 -0.3114 0.3663 0.1206 0.0810 0.3577 0.3002 0.1638 refined 17.9910 52.2470 74.2110 X-RAY DIFFRACTION A 1 A 155 X-RAY DIFFRACTION 1 B 20 B 97 X-RAY DIFFRACTION 2 author_and_software_defined_assembly PQS 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ASP 30 A N ASP 34 A O ARG 40 A O ARG 44 A N ILE 43 A N ILE 47 A O TYR 56 A O TYR 60 A N LYS 61 A N LYS 65 A O LYS 72 A O LYS 76 B N VAL 38 B N VAL 18 B O ILE 22 B O ILE 2 B N LYS 25 B N LYS 5 B O ASP 86 B O ASP 66 B N TYR 91 B N TYR 71 B O ARG 63 B O ARG 43 B N PHE 66 B N PHE 46 B O GLN 69 B O GLN 49 1 A GLY -3 A GLY 1 1 Y 1 A ALA -2 A ALA 2 1 Y 1 A MET -1 A MET 3 1 Y 1 A ALA 0 A ALA 4 1 Y 1 A MET 1 A MET 5 1 Y 1 A B NZ C LYS GLY 14 97 1.32 1 5.75 0.90 118.30 124.05 A A A CB CG OD2 ASP ASP ASP 30 30 30 N 1 5.47 0.90 118.30 123.77 A A A CB CG OD2 ASP ASP ASP 48 48 48 N 1 A B O NH1 ALA ARG 119 54 2.11 1_555 7_556 1 A LYS 97 -124.09 -113.98 1 A ALA 119 -155.51 88.36 1 A ASN 137 -151.02 72.95 1 B SER 31 93.73 17.97 1 B THR 41 -110.08 55.61 1 B ASN 60 84.58 -8.44 1 B LEU 80 66.72 -15.63 53.66 -2.04000 0.00000 0.00000 -2.04000 0.00000 4.07000 0.949 0.910 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.279 0.210 0.213 2.30 55.05 651 12545 4.900 99.6 17.029 0.217 RANDOM LIKELY RESIDUAL 1 THROUGHOUT MOLECULAR REPLACEMENT 0.315 0.258 0.80 0.80 1.20 PDB ENTRY 1FZY MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 2.30 55.05 83 1936 0 0 1853 0.018 0.022 1905 0.002 0.020 1729 1.640 1.948 2577 0.927 3.000 4052 7.276 5.000 231 35.697 25.055 91 17.644 15.000 347 20.630 15.000 10 0.095 0.200 283 0.006 0.020 2095 0.001 0.020 360 0.198 0.200 403 0.190 0.200 1782 0.183 0.200 900 0.089 0.200 1064 0.165 0.200 91 0.075 0.200 6 0.272 0.200 27 0.319 0.200 6 0.813 1.500 1512 0.173 1.500 467 0.979 2.000 1884 1.755 3.000 866 2.496 4.500 693 0.4110 0.2930 2.36 56 871 20 98.51 2.300 50.000 2BF8 13257 -3.000 0.07000 1 30.6000 13.400 99.9 0.53000 2.30 2.42 3.800 1 13.00 99.5 refinement REFMAC 5.2.0005 data reduction MOSFLM data scaling SCALA phasing AMoRE Crystal structure of SUMO modified ubiquitin conjugating enzyme E2- 25K 1 N N 2 N N 3 N N 3 N N A ALA 2 A ALA 6 HELX_P A LYS 18 A LYS 22 1 1 17 A SER 19 A SER 23 HELX_P A LYS 24 A LYS 28 1 2 6 A LEU 93 A LEU 97 HELX_P A LYS 97 A LYS 101 5 3 5 A THR 105 A THR 109 HELX_P A ALA 119 A ALA 123 1 4 15 A ASP 127 A ASP 131 HELX_P A ASN 137 A ASN 141 1 5 11 A ASN 137 A ASN 141 HELX_P A TYR 152 A TYR 156 1 6 16 B LEU 44 B LEU 24 HELX_P B GLN 55 B GLN 35 1 7 12 B LYS 78 B LYS 58 HELX_P B MET 82 B MET 62 5 8 5 LIGASE LIGASE-COMPLEX, E2-25K, E2 UBIQUITIN CONJUGATING ENZYME, SUMO, SUMO-TARGET STRUCTURE, LIGASE, STRUCTURAL PROTEOMICS IN EUROPE, SPINE, STRUCTURAL GENOMICS A TYR 66 A TYR 70 1 A PRO 67 A PRO 71 1.19 2BF8 PDB 1 2BF8 UBC1_BOVIN UNP 1 P61085 SM33_HUMAN UNP 2 P63165 -3 1 2BF8 -3 1 2BF8 A 1 1 5 1 154 2BF8 2 155 P61085 A 2 6 159 21 97 2BF8 21 97 P63165 B 3 1 77 4 5 anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A ILE 27 A ILE 31 A LEU 31 A LEU 35 A GLU 38 A GLU 42 A ALA 44 A ALA 48 A ARG 55 A ARG 59 A LYS 61 A LYS 65 A LYS 72 A LYS 76 A PHE 75 A PHE 79 B GLU 33 B GLU 13 B VAL 38 B VAL 18 B ILE 22 B ILE 2 B ILE 27 B ILE 7 B ASP 86 B ASP 66 B GLN 92 B GLN 72 B LEU 62 B LEU 42 B PHE 66 B PHE 46 B GLN 69 B GLN 49 B ARG 70 B ARG 50 96 P 43 21 2