0.007063
0.004078
0.000000
0.000000
0.008155
0.000000
0.000000
0.000000
0.022895
0.00000
0.00000
0.00000
Birtley, J.R.
Brick, P.
Curry, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
18
90.00
90.00
120.00
141.589
141.589
43.677
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
280
11520
10.1074/JBC.M413254200
15654079
Crystal Structure of Foot-and-Mouth Disease Virus 3C Protease: New Insights Into Catalytic Mechanism and Cleavage Specificity
2005
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
MIRRORS
CCD
2004-04-04
MARRESEARCH
SI 111 - CHANNEL CUT MONOCHROMATOR
MAD
M
x-ray
1
0.98
1.0
BM14
ESRF
0.98
SYNCHROTRON
ESRF BEAMLINE BM14
22963.785
FOOT-AND-MOUTH DISEASE VIRUS 3C PROTEASE
3.4.22.28
YES
2
man
polymer
18.015
water
98
nat
water
no
yes
GSGAPPTDLQK(MSE)V(MSE)GNTKPVELNLDGKTVAICCATGVFGTAYLVPRHLFAEKYDKI(MSE)LDGRA(MSE)T
DSDYRVFEFEIKVKGQD(MSE)LSDAAL(MSE)VLHRGNKVRDITKHFRDTAR(MSE)KKGTPVVGVVNNADVGRLIFSG
EALTYKDIVVS(MSE)DGDT(MSE)PGLFAYKAATRAGYAGGAVLAKDGADTFIVGTHSAGGNGVGYCSCVSRS(MSE)L
QK(MSE)KAHVEH
GSGAPPTDLQKMVMGNTKPVELNLDGKTVAICCATGVFGTAYLVPRHLFAEKYDKIMLDGRAMTDSDYRVFEFEIKVKGQ
DMLSDAALMVLHRGNKVRDITKHFRDTARMKKGTPVVGVVNNADVGRLIFSGEALTYKDIVVSMDGDTMPGLFAYKAATR
AGYAGGAVLAKDGADTFIVGTHSAGGNGVGYCSCVSRSMLQKMKAHVEH
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
FMDV
A10(61)
sample
12110
FOOT-AND-MOUTH DISEASE VIRUS
562
ESCHERICHIA COLI
B834(DE3)
PETM-11(3C)
1
1.83
32
6.50
SEE PAPER, pH 6.50
repository
Initial release
Version format compliance
Version format compliance
1
0
2005-02-04
1
1
2011-05-08
1
2
2011-07-13
SHEET
DETERMINATION METHOD: DSSP
THE SHEETS PRESENTED AS "AD BC" IN EACH CHAIN ON SHEET RECORDS
BELOW IS ACTUALLY AN 6-STRANDED BARREL THIS IS REPRESENTED BY
A 7-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS
ARE IDENTICAL.
PDBE
Y
PDBE
2005-01-10
REL
HOH
water
ENGINEERED RESIDUE IN CHAIN A B, CYS 95 TO LYS
ENGINEERED RESIDUE IN CHAIN A B, CYS 142 TO SER
ENGINEERED RESIDUE IN CHAIN A B, CYS 163 TO ALA
THIS PROTEIN CONTAINS THREE SUBSTITUTED CYS RESIDUES
(C95K, C142S) TO ENHANCE SOLUBILITY AND ONE (C163A)
WHICH SUBSTITUTES THE ACTIVE SITE NUCLEOPHILE AND
THEREFORE INACTIVATES THE ENZYME.
CRYSTALLISED SEQUENCE CONTAINS AN ADDITIONAL GLY AT N-TERM
(RESIDUE NUMBER -1). ALSO CONTAINS TRUNCATED C-TERMINUS
(BY 6 RESIDUES). DATABASE ENTRY CONTAINS A PROTEIN
SEQUENCE ERROR. THE SEQUENCE 78-RTGHALRRGTHW-89 IN THE
DATABASE ENTRY SHOULD BE REPLACED BY 78-GQDMLSDAALMV-89.
THIS IS NOT EXPLICITLY CORRECTED IN THE SEQUENCE CONFLICTS
GIVEN BELOW (CONFINED TO ENGINEERED MUTATIONS).
THE FOLLOWING RESIDUES ARE CONFLICTS BETWEEN THE PROTEIN
AND THE UNIPROT ENTRY, BUT SINCE THEY ARE NOT OBSERVED IN
THE STRUCTURE, THEY CANNOT BE GIVEN SEQADV RECORDS:
B78 (GLY), B79 (GLN), B80 (ASP), B81 (MSE)
RESIDUES A142 (SER) AND B142 (SER) ARE ENGINEERED
MUTATIONS, BUT THEY ARE NOT OBSERVED AND ARE NOT THEREFORE
RECORDED WITH SEQADV RECORDS.
HOH
2001
2
HOH
HOH
2001
A
HOH
2002
2
HOH
HOH
2002
A
HOH
2003
2
HOH
HOH
2003
A
HOH
2004
2
HOH
HOH
2004
A
HOH
2005
2
HOH
HOH
2005
A
HOH
2006
2
HOH
HOH
2006
A
HOH
2007
2
HOH
HOH
2007
A
HOH
2008
2
HOH
HOH
2008
A
HOH
2009
2
HOH
HOH
2009
A
HOH
2010
2
HOH
HOH
2010
A
HOH
2011
2
HOH
HOH
2011
A
HOH
2012
2
HOH
HOH
2012
A
HOH
2013
2
HOH
HOH
2013
A
HOH
2014
2
HOH
HOH
2014
A
HOH
2015
2
HOH
HOH
2015
A
HOH
2016
2
HOH
HOH
2016
A
HOH
2017
2
HOH
HOH
2017
A
HOH
2018
2
HOH
HOH
2018
A
HOH
2019
2
HOH
HOH
2019
A
HOH
2020
2
HOH
HOH
2020
A
HOH
2021
2
HOH
HOH
2021
A
HOH
2022
2
HOH
HOH
2022
A
HOH
2023
2
HOH
HOH
2023
A
HOH
2024
2
HOH
HOH
2024
A
HOH
2025
2
HOH
HOH
2025
A
HOH
2026
2
HOH
HOH
2026
A
HOH
2027
2
HOH
HOH
2027
A
HOH
2028
2
HOH
HOH
2028
A
HOH
2029
2
HOH
HOH
2029
A
HOH
2030
2
HOH
HOH
2030
A
HOH
2031
2
HOH
HOH
2031
A
HOH
2032
2
HOH
HOH
2032
A
HOH
2033
2
HOH
HOH
2033
A
HOH
2034
2
HOH
HOH
2034
A
HOH
2035
2
HOH
HOH
2035
A
HOH
2036
2
HOH
HOH
2036
A
HOH
2037
2
HOH
HOH
2037
A
HOH
2038
2
HOH
HOH
2038
A
HOH
2039
2
HOH
HOH
2039
A
HOH
2040
2
HOH
HOH
2040
A
HOH
2041
2
HOH
HOH
2041
A
HOH
2042
2
HOH
HOH
2042
A
HOH
2043
2
HOH
HOH
2043
A
HOH
2044
2
HOH
HOH
2044
A
HOH
2045
2
HOH
HOH
2045
A
HOH
2046
2
HOH
HOH
2046
A
HOH
2047
2
HOH
HOH
2047
A
HOH
2048
2
HOH
HOH
2048
A
HOH
2049
2
HOH
HOH
2049
A
HOH
2050
2
HOH
HOH
2050
A
HOH
2051
2
HOH
HOH
2051
A
HOH
2052
2
HOH
HOH
2052
A
HOH
2053
2
HOH
HOH
2053
A
HOH
2054
2
HOH
HOH
2054
A
HOH
2001
2
HOH
HOH
2001
B
HOH
2002
2
HOH
HOH
2002
B
HOH
2003
2
HOH
HOH
2003
B
HOH
2004
2
HOH
HOH
2004
B
HOH
2005
2
HOH
HOH
2005
B
HOH
2006
2
HOH
HOH
2006
B
HOH
2007
2
HOH
HOH
2007
B
HOH
2008
2
HOH
HOH
2008
B
HOH
2009
2
HOH
HOH
2009
B
HOH
2010
2
HOH
HOH
2010
B
HOH
2011
2
HOH
HOH
2011
B
HOH
2012
2
HOH
HOH
2012
B
HOH
2013
2
HOH
HOH
2013
B
HOH
2014
2
HOH
HOH
2014
B
HOH
2015
2
HOH
HOH
2015
B
HOH
2016
2
HOH
HOH
2016
B
HOH
2017
2
HOH
HOH
2017
B
HOH
2018
2
HOH
HOH
2018
B
HOH
2019
2
HOH
HOH
2019
B
HOH
2020
2
HOH
HOH
2020
B
HOH
2021
2
HOH
HOH
2021
B
HOH
2022
2
HOH
HOH
2022
B
HOH
2023
2
HOH
HOH
2023
B
HOH
2024
2
HOH
HOH
2024
B
HOH
2025
2
HOH
HOH
2025
B
HOH
2026
2
HOH
HOH
2026
B
HOH
2027
2
HOH
HOH
2027
B
HOH
2028
2
HOH
HOH
2028
B
HOH
2029
2
HOH
HOH
2029
B
HOH
2030
2
HOH
HOH
2030
B
HOH
2031
2
HOH
HOH
2031
B
HOH
2032
2
HOH
HOH
2032
B
HOH
2033
2
HOH
HOH
2033
B
HOH
2034
2
HOH
HOH
2034
B
HOH
2035
2
HOH
HOH
2035
B
HOH
2036
2
HOH
HOH
2036
B
HOH
2037
2
HOH
HOH
2037
B
HOH
2038
2
HOH
HOH
2038
B
HOH
2039
2
HOH
HOH
2039
B
HOH
2040
2
HOH
HOH
2040
B
HOH
2041
2
HOH
HOH
2041
B
HOH
2042
2
HOH
HOH
2042
B
HOH
2043
2
HOH
HOH
2043
B
HOH
2044
2
HOH
HOH
2044
B
n
1
0
A
n
2
1
A
n
3
2
A
n
4
3
A
n
5
4
A
n
6
5
A
n
7
6
A
ASP
7
n
8
ASP
7
A
LEU
8
n
9
LEU
8
A
GLN
9
n
10
GLN
9
A
LYS
10
n
11
LYS
10
A
MSE
11
n
12
MSE
11
A
VAL
12
n
13
VAL
12
A
MSE
13
n
14
MSE
13
A
GLY
14
n
15
GLY
14
A
ASN
15
n
16
ASN
15
A
THR
16
n
17
THR
16
A
LYS
17
n
18
LYS
17
A
PRO
18
n
19
PRO
18
A
VAL
19
n
20
VAL
19
A
GLU
20
n
21
GLU
20
A
LEU
21
n
22
LEU
21
A
ASN
22
n
23
ASN
22
A
LEU
23
n
24
LEU
23
A
ASP
24
n
25
ASP
24
A
GLY
25
n
26
GLY
25
A
LYS
26
n
27
LYS
26
A
THR
27
n
28
THR
27
A
VAL
28
n
29
VAL
28
A
ALA
29
n
30
ALA
29
A
ILE
30
n
31
ILE
30
A
CYS
31
n
32
CYS
31
A
CYS
32
n
33
CYS
32
A
ALA
33
n
34
ALA
33
A
THR
34
n
35
THR
34
A
GLY
35
n
36
GLY
35
A
VAL
36
n
37
VAL
36
A
PHE
37
n
38
PHE
37
A
GLY
38
n
39
GLY
38
A
THR
39
n
40
THR
39
A
ALA
40
n
41
ALA
40
A
TYR
41
n
42
TYR
41
A
LEU
42
n
43
LEU
42
A
VAL
43
n
44
VAL
43
A
PRO
44
n
45
PRO
44
A
ARG
45
n
46
ARG
45
A
HIS
46
n
47
HIS
46
A
LEU
47
n
48
LEU
47
A
PHE
48
n
49
PHE
48
A
ALA
49
n
50
ALA
49
A
GLU
50
n
51
GLU
50
A
LYS
51
n
52
LYS
51
A
TYR
52
n
53
TYR
52
A
ASP
53
n
54
ASP
53
A
LYS
54
n
55
LYS
54
A
ILE
55
n
56
ILE
55
A
MSE
56
n
57
MSE
56
A
LEU
57
n
58
LEU
57
A
ASP
58
n
59
ASP
58
A
GLY
59
n
60
GLY
59
A
ARG
60
n
61
ARG
60
A
ALA
61
n
62
ALA
61
A
MSE
62
n
63
MSE
62
A
THR
63
n
64
THR
63
A
ASP
64
n
65
ASP
64
A
SER
65
n
66
SER
65
A
ASP
66
n
67
ASP
66
A
TYR
67
n
68
TYR
67
A
ARG
68
n
69
ARG
68
A
VAL
69
n
70
VAL
69
A
PHE
70
n
71
PHE
70
A
GLU
71
n
72
GLU
71
A
PHE
72
n
73
PHE
72
A
GLU
73
n
74
GLU
73
A
ILE
74
n
75
ILE
74
A
LYS
75
n
76
LYS
75
A
VAL
76
n
77
VAL
76
A
LYS
77
n
78
LYS
77
A
GLY
78
n
79
GLY
78
A
GLN
79
n
80
GLN
79
A
ASP
80
n
81
ASP
80
A
MSE
81
n
82
MSE
81
A
LEU
82
n
83
LEU
82
A
SER
83
n
84
SER
83
A
ASP
84
n
85
ASP
84
A
ALA
85
n
86
ALA
85
A
ALA
86
n
87
ALA
86
A
LEU
87
n
88
LEU
87
A
MSE
88
n
89
MSE
88
A
VAL
89
n
90
VAL
89
A
LEU
90
n
91
LEU
90
A
HIS
91
n
92
HIS
91
A
ARG
92
n
93
ARG
92
A
GLY
93
n
94
GLY
93
A
ASN
94
n
95
ASN
94
A
LYS
95
n
96
LYS
95
A
VAL
96
n
97
VAL
96
A
ARG
97
n
98
ARG
97
A
ASP
98
n
99
ASP
98
A
ILE
99
n
100
ILE
99
A
THR
100
n
101
THR
100
A
LYS
101
n
102
LYS
101
A
HIS
102
n
103
HIS
102
A
PHE
103
n
104
PHE
103
A
ARG
104
n
105
ARG
104
A
ASP
105
n
106
ASP
105
A
THR
106
n
107
THR
106
A
ALA
107
n
108
ALA
107
A
ARG
108
n
109
ARG
108
A
MSE
109
n
110
MSE
109
A
LYS
110
n
111
LYS
110
A
LYS
111
n
112
LYS
111
A
GLY
112
n
113
GLY
112
A
THR
113
n
114
THR
113
A
PRO
114
n
115
PRO
114
A
VAL
115
n
116
VAL
115
A
VAL
116
n
117
VAL
116
A
GLY
117
n
118
GLY
117
A
VAL
118
n
119
VAL
118
A
VAL
119
n
120
VAL
119
A
ASN
120
n
121
ASN
120
A
ASN
121
n
122
ASN
121
A
ALA
122
n
123
ALA
122
A
ASP
123
n
124
ASP
123
A
VAL
124
n
125
VAL
124
A
GLY
125
n
126
GLY
125
A
ARG
126
n
127
ARG
126
A
LEU
127
n
128
LEU
127
A
ILE
128
n
129
ILE
128
A
PHE
129
n
130
PHE
129
A
SER
130
n
131
SER
130
A
GLY
131
n
132
GLY
131
A
GLU
132
n
133
GLU
132
A
ALA
133
n
134
ALA
133
A
LEU
134
n
135
LEU
134
A
THR
135
n
136
THR
135
A
TYR
136
n
137
TYR
136
A
LYS
137
n
138
LYS
137
A
ASP
138
n
139
ASP
138
A
ILE
139
n
140
ILE
139
A
VAL
140
n
141
VAL
140
A
VAL
141
n
142
VAL
141
A
n
143
142
A
n
144
143
A
n
145
144
A
n
146
145
A
n
147
146
A
THR
147
n
148
THR
147
A
MSE
148
n
149
MSE
148
A
PRO
149
n
150
PRO
149
A
GLY
150
n
151
GLY
150
A
LEU
151
n
152
LEU
151
A
PHE
152
n
153
PHE
152
A
ALA
153
n
154
ALA
153
A
TYR
154
n
155
TYR
154
A
LYS
155
n
156
LYS
155
A
ALA
156
n
157
ALA
156
A
ALA
157
n
158
ALA
157
A
THR
158
n
159
THR
158
A
ARG
159
n
160
ARG
159
A
ALA
160
n
161
ALA
160
A
GLY
161
n
162
GLY
161
A
TYR
162
n
163
TYR
162
A
ALA
163
n
164
ALA
163
A
GLY
164
n
165
GLY
164
A
GLY
165
n
166
GLY
165
A
ALA
166
n
167
ALA
166
A
VAL
167
n
168
VAL
167
A
LEU
168
n
169
LEU
168
A
ALA
169
n
170
ALA
169
A
LYS
170
n
171
LYS
170
A
ASP
171
n
172
ASP
171
A
GLY
172
n
173
GLY
172
A
ALA
173
n
174
ALA
173
A
ASP
174
n
175
ASP
174
A
THR
175
n
176
THR
175
A
PHE
176
n
177
PHE
176
A
ILE
177
n
178
ILE
177
A
VAL
178
n
179
VAL
178
A
GLY
179
n
180
GLY
179
A
THR
180
n
181
THR
180
A
HIS
181
n
182
HIS
181
A
SER
182
n
183
SER
182
A
ALA
183
n
184
ALA
183
A
GLY
184
n
185
GLY
184
A
GLY
185
n
186
GLY
185
A
ASN
186
n
187
ASN
186
A
GLY
187
n
188
GLY
187
A
VAL
188
n
189
VAL
188
A
GLY
189
n
190
GLY
189
A
TYR
190
n
191
TYR
190
A
CYS
191
n
192
CYS
191
A
SER
192
n
193
SER
192
A
CYS
193
n
194
CYS
193
A
VAL
194
n
195
VAL
194
A
SER
195
n
196
SER
195
A
ARG
196
n
197
ARG
196
A
SER
197
n
198
SER
197
A
MSE
198
n
199
MSE
198
A
LEU
199
n
200
LEU
199
A
GLN
200
n
201
GLN
200
A
LYS
201
n
202
LYS
201
A
MSE
202
n
203
MSE
202
A
LYS
203
n
204
LYS
203
A
ALA
204
n
205
ALA
204
A
HIS
205
n
206
HIS
205
A
n
207
206
A
n
208
207
A
n
209
208
A
n
1
0
B
n
2
1
B
n
3
2
B
n
4
3
B
n
5
4
B
n
6
5
B
n
7
6
B
ASP
7
n
8
ASP
7
B
LEU
8
n
9
LEU
8
B
GLN
9
n
10
GLN
9
B
LYS
10
n
11
LYS
10
B
MSE
11
n
12
MSE
11
B
VAL
12
n
13
VAL
12
B
MSE
13
n
14
MSE
13
B
GLY
14
n
15
GLY
14
B
ASN
15
n
16
ASN
15
B
THR
16
n
17
THR
16
B
LYS
17
n
18
LYS
17
B
PRO
18
n
19
PRO
18
B
VAL
19
n
20
VAL
19
B
GLU
20
n
21
GLU
20
B
LEU
21
n
22
LEU
21
B
ASN
22
n
23
ASN
22
B
LEU
23
n
24
LEU
23
B
ASP
24
n
25
ASP
24
B
GLY
25
n
26
GLY
25
B
LYS
26
n
27
LYS
26
B
THR
27
n
28
THR
27
B
VAL
28
n
29
VAL
28
B
ALA
29
n
30
ALA
29
B
ILE
30
n
31
ILE
30
B
CYS
31
n
32
CYS
31
B
CYS
32
n
33
CYS
32
B
ALA
33
n
34
ALA
33
B
THR
34
n
35
THR
34
B
GLY
35
n
36
GLY
35
B
VAL
36
n
37
VAL
36
B
PHE
37
n
38
PHE
37
B
GLY
38
n
39
GLY
38
B
THR
39
n
40
THR
39
B
ALA
40
n
41
ALA
40
B
TYR
41
n
42
TYR
41
B
LEU
42
n
43
LEU
42
B
VAL
43
n
44
VAL
43
B
PRO
44
n
45
PRO
44
B
ARG
45
n
46
ARG
45
B
HIS
46
n
47
HIS
46
B
LEU
47
n
48
LEU
47
B
PHE
48
n
49
PHE
48
B
ALA
49
n
50
ALA
49
B
GLU
50
n
51
GLU
50
B
LYS
51
n
52
LYS
51
B
TYR
52
n
53
TYR
52
B
ASP
53
n
54
ASP
53
B
LYS
54
n
55
LYS
54
B
ILE
55
n
56
ILE
55
B
MSE
56
n
57
MSE
56
B
LEU
57
n
58
LEU
57
B
ASP
58
n
59
ASP
58
B
GLY
59
n
60
GLY
59
B
ARG
60
n
61
ARG
60
B
ALA
61
n
62
ALA
61
B
MSE
62
n
63
MSE
62
B
THR
63
n
64
THR
63
B
ASP
64
n
65
ASP
64
B
SER
65
n
66
SER
65
B
ASP
66
n
67
ASP
66
B
TYR
67
n
68
TYR
67
B
ARG
68
n
69
ARG
68
B
VAL
69
n
70
VAL
69
B
PHE
70
n
71
PHE
70
B
GLU
71
n
72
GLU
71
B
PHE
72
n
73
PHE
72
B
GLU
73
n
74
GLU
73
B
n
75
74
B
n
76
75
B
n
77
76
B
n
78
77
B
n
79
78
B
n
80
79
B
n
81
80
B
n
82
81
B
LEU
82
n
83
LEU
82
B
SER
83
n
84
SER
83
B
ASP
84
n
85
ASP
84
B
ALA
85
n
86
ALA
85
B
ALA
86
n
87
ALA
86
B
LEU
87
n
88
LEU
87
B
MSE
88
n
89
MSE
88
B
VAL
89
n
90
VAL
89
B
LEU
90
n
91
LEU
90
B
HIS
91
n
92
HIS
91
B
ARG
92
n
93
ARG
92
B
GLY
93
n
94
GLY
93
B
ASN
94
n
95
ASN
94
B
LYS
95
n
96
LYS
95
B
VAL
96
n
97
VAL
96
B
ARG
97
n
98
ARG
97
B
ASP
98
n
99
ASP
98
B
ILE
99
n
100
ILE
99
B
THR
100
n
101
THR
100
B
LYS
101
n
102
LYS
101
B
HIS
102
n
103
HIS
102
B
PHE
103
n
104
PHE
103
B
ARG
104
n
105
ARG
104
B
ASP
105
n
106
ASP
105
B
THR
106
n
107
THR
106
B
ALA
107
n
108
ALA
107
B
ARG
108
n
109
ARG
108
B
MSE
109
n
110
MSE
109
B
LYS
110
n
111
LYS
110
B
LYS
111
n
112
LYS
111
B
GLY
112
n
113
GLY
112
B
THR
113
n
114
THR
113
B
PRO
114
n
115
PRO
114
B
VAL
115
n
116
VAL
115
B
VAL
116
n
117
VAL
116
B
GLY
117
n
118
GLY
117
B
VAL
118
n
119
VAL
118
B
VAL
119
n
120
VAL
119
B
ASN
120
n
121
ASN
120
B
ASN
121
n
122
ASN
121
B
ALA
122
n
123
ALA
122
B
ASP
123
n
124
ASP
123
B
VAL
124
n
125
VAL
124
B
GLY
125
n
126
GLY
125
B
ARG
126
n
127
ARG
126
B
LEU
127
n
128
LEU
127
B
ILE
128
n
129
ILE
128
B
PHE
129
n
130
PHE
129
B
SER
130
n
131
SER
130
B
GLY
131
n
132
GLY
131
B
GLU
132
n
133
GLU
132
B
ALA
133
n
134
ALA
133
B
LEU
134
n
135
LEU
134
B
THR
135
n
136
THR
135
B
TYR
136
n
137
TYR
136
B
LYS
137
n
138
LYS
137
B
ASP
138
n
139
ASP
138
B
ILE
139
n
140
ILE
139
B
VAL
140
n
141
VAL
140
B
n
142
141
B
n
143
142
B
n
144
143
B
n
145
144
B
n
146
145
B
n
147
146
B
n
148
147
B
MSE
148
n
149
MSE
148
B
PRO
149
n
150
PRO
149
B
GLY
150
n
151
GLY
150
B
LEU
151
n
152
LEU
151
B
PHE
152
n
153
PHE
152
B
ALA
153
n
154
ALA
153
B
TYR
154
n
155
TYR
154
B
LYS
155
n
156
LYS
155
B
ALA
156
n
157
ALA
156
B
ALA
157
n
158
ALA
157
B
THR
158
n
159
THR
158
B
ARG
159
n
160
ARG
159
B
ALA
160
n
161
ALA
160
B
GLY
161
n
162
GLY
161
B
TYR
162
n
163
TYR
162
B
ALA
163
n
164
ALA
163
B
GLY
164
n
165
GLY
164
B
GLY
165
n
166
GLY
165
B
ALA
166
n
167
ALA
166
B
VAL
167
n
168
VAL
167
B
LEU
168
n
169
LEU
168
B
ALA
169
n
170
ALA
169
B
LYS
170
n
171
LYS
170
B
ASP
171
n
172
ASP
171
B
GLY
172
n
173
GLY
172
B
ALA
173
n
174
ALA
173
B
ASP
174
n
175
ASP
174
B
THR
175
n
176
THR
175
B
PHE
176
n
177
PHE
176
B
ILE
177
n
178
ILE
177
B
VAL
178
n
179
VAL
178
B
GLY
179
n
180
GLY
179
B
THR
180
n
181
THR
180
B
HIS
181
n
182
HIS
181
B
SER
182
n
183
SER
182
B
ALA
183
n
184
ALA
183
B
GLY
184
n
185
GLY
184
B
GLY
185
n
186
GLY
185
B
ASN
186
n
187
ASN
186
B
GLY
187
n
188
GLY
187
B
VAL
188
n
189
VAL
188
B
GLY
189
n
190
GLY
189
B
TYR
190
n
191
TYR
190
B
CYS
191
n
192
CYS
191
B
SER
192
n
193
SER
192
B
CYS
193
n
194
CYS
193
B
VAL
194
n
195
VAL
194
B
SER
195
n
196
SER
195
B
ARG
196
n
197
ARG
196
B
SER
197
n
198
SER
197
B
MSE
198
n
199
MSE
198
B
LEU
199
n
200
LEU
199
B
GLN
200
n
201
GLN
200
B
LYS
201
n
202
LYS
201
B
MSE
202
n
203
MSE
202
B
LYS
203
n
204
LYS
203
B
ALA
204
n
205
ALA
204
B
HIS
205
n
206
HIS
205
B
n
207
206
B
n
208
207
B
n
209
208
B
author_and_software_defined_assembly
PQS
1
monomeric
author_and_software_defined_assembly
PQS
1
monomeric
A
MSE
11
SELENOMETHIONINE
A
MSE
12
MET
A
MSE
13
SELENOMETHIONINE
A
MSE
14
MET
A
MSE
56
SELENOMETHIONINE
A
MSE
57
MET
A
MSE
62
SELENOMETHIONINE
A
MSE
63
MET
A
MSE
81
SELENOMETHIONINE
A
MSE
82
MET
A
MSE
88
SELENOMETHIONINE
A
MSE
89
MET
A
MSE
109
SELENOMETHIONINE
A
MSE
110
MET
A
MSE
148
SELENOMETHIONINE
A
MSE
149
MET
A
MSE
198
SELENOMETHIONINE
A
MSE
199
MET
A
MSE
202
SELENOMETHIONINE
A
MSE
203
MET
B
MSE
11
SELENOMETHIONINE
B
MSE
12
MET
B
MSE
13
SELENOMETHIONINE
B
MSE
14
MET
B
MSE
56
SELENOMETHIONINE
B
MSE
57
MET
B
MSE
62
SELENOMETHIONINE
B
MSE
63
MET
B
MSE
88
SELENOMETHIONINE
B
MSE
89
MET
B
MSE
109
SELENOMETHIONINE
B
MSE
110
MET
B
MSE
148
SELENOMETHIONINE
B
MSE
149
MET
B
MSE
198
SELENOMETHIONINE
B
MSE
199
MET
B
MSE
202
SELENOMETHIONINE
B
MSE
203
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
MSE
62
A
N
MSE
63
A
O
ILE
55
A
O
ILE
56
A
N
MSE
56
A
N
MSE
57
A
O
GLU
20
A
O
GLU
21
A
N
LEU
23
A
N
LEU
24
A
O
LYS
26
A
O
LYS
27
A
N
VAL
36
A
N
VAL
37
A
O
ALA
40
A
O
ALA
41
A
N
VAL
43
A
N
VAL
44
A
O
ALA
86
A
O
ALA
87
A
N
VAL
89
A
N
VAL
90
A
O
ARG
68
A
O
ARG
69
A
N
ILE
74
A
N
ILE
75
A
O
MSE
81
A
O
MSE
82
A
N
MSE
109
A
N
MSE
110
A
O
LYS
137
A
O
LYS
138
A
N
ASN
121
A
N
ASN
122
A
O
GLY
125
A
O
GLY
126
A
N
GLU
132
A
N
GLU
133
A
O
LYS
155
A
O
LYS
156
A
N
TYR
154
A
N
TYR
155
A
O
GLY
189
A
O
GLY
190
A
N
SER
192
A
N
SER
193
A
O
THR
180
A
O
THR
181
A
N
VAL
178
A
N
VAL
179
A
O
VAL
167
A
O
VAL
168
A
N
LYS
170
A
N
LYS
171
A
O
PRO
114
A
O
PRO
115
B
N
MSE
62
B
N
MSE
63
B
O
ILE
55
B
O
ILE
56
B
N
MSE
56
B
N
MSE
57
B
O
GLU
20
B
O
GLU
21
B
N
LEU
23
B
N
LEU
24
B
O
LYS
26
B
O
LYS
27
B
N
VAL
36
B
N
VAL
37
B
O
ALA
40
B
O
ALA
41
B
N
VAL
43
B
N
VAL
44
B
O
ALA
86
B
O
ALA
87
B
N
VAL
89
B
N
VAL
90
B
O
ARG
68
B
O
ARG
69
B
N
MSE
109
B
N
MSE
110
B
O
LYS
137
B
O
LYS
138
B
N
ASN
121
B
N
ASN
122
B
O
GLY
125
B
O
GLY
126
B
N
GLU
132
B
N
GLU
133
B
O
LYS
155
B
O
LYS
156
B
N
TYR
154
B
N
TYR
155
B
O
GLY
189
B
O
GLY
190
B
N
SER
192
B
N
SER
193
B
O
THR
180
B
O
THR
181
B
N
VAL
178
B
N
VAL
179
B
O
VAL
167
B
O
VAL
168
B
N
LEU
168
B
N
LEU
169
B
O
VAL
116
B
O
VAL
117
1
A
CG
ASP
7
A
CG
ASP
8
1
Y
1
A
OD1
ASP
7
A
OD1
ASP
8
1
Y
1
A
OD2
ASP
7
A
OD2
ASP
8
1
Y
1
A
CD
GLN
9
A
CD
GLN
10
1
Y
1
A
OE1
GLN
9
A
OE1
GLN
10
1
Y
1
A
NE2
GLN
9
A
NE2
GLN
10
1
Y
1
A
CG
LYS
10
A
CG
LYS
11
1
Y
1
A
CD
LYS
10
A
CD
LYS
11
1
Y
1
A
CE
LYS
10
A
CE
LYS
11
1
Y
1
A
NZ
LYS
10
A
NZ
LYS
11
1
Y
1
A
CD
LYS
17
A
CD
LYS
18
1
Y
1
A
CE
LYS
17
A
CE
LYS
18
1
Y
1
A
NZ
LYS
17
A
NZ
LYS
18
1
Y
1
A
CG
LYS
26
A
CG
LYS
27
1
Y
1
A
CD
LYS
26
A
CD
LYS
27
1
Y
1
A
CE
LYS
26
A
CE
LYS
27
1
Y
1
A
NZ
LYS
26
A
NZ
LYS
27
1
Y
1
A
CG1
ILE
74
A
CG1
ILE
75
1
Y
1
A
CG2
ILE
74
A
CG2
ILE
75
1
Y
1
A
CD1
ILE
74
A
CD1
ILE
75
1
Y
1
A
CG
LYS
75
A
CG
LYS
76
1
Y
1
A
CD
LYS
75
A
CD
LYS
76
1
Y
1
A
CE
LYS
75
A
CE
LYS
76
1
Y
1
A
NZ
LYS
75
A
NZ
LYS
76
1
Y
1
A
CG
LYS
77
A
CG
LYS
78
1
Y
1
A
CD
LYS
77
A
CD
LYS
78
1
Y
1
A
CE
LYS
77
A
CE
LYS
78
1
Y
1
A
NZ
LYS
77
A
NZ
LYS
78
1
Y
1
A
CG
GLN
79
A
CG
GLN
80
1
Y
1
A
CD
GLN
79
A
CD
GLN
80
1
Y
1
A
OE1
GLN
79
A
OE1
GLN
80
1
Y
1
A
NE2
GLN
79
A
NE2
GLN
80
1
Y
1
A
CG
MSE
81
A
CG
MSE
82
1
Y
1
A
SE
MSE
81
A
SE
MSE
82
1
Y
1
A
CE
MSE
81
A
CE
MSE
82
1
Y
1
A
CG
ARG
92
A
CG
ARG
93
1
Y
1
A
CD
ARG
92
A
CD
ARG
93
1
Y
1
A
NE
ARG
92
A
NE
ARG
93
1
Y
1
A
CZ
ARG
92
A
CZ
ARG
93
1
Y
1
A
NH1
ARG
92
A
NH1
ARG
93
1
Y
1
A
NH2
ARG
92
A
NH2
ARG
93
1
Y
1
A
CG
LYS
95
A
CG
LYS
96
1
Y
1
A
CD
LYS
95
A
CD
LYS
96
1
Y
1
A
CE
LYS
95
A
CE
LYS
96
1
Y
1
A
NZ
LYS
95
A
NZ
LYS
96
1
Y
1
A
CG
ARG
97
A
CG
ARG
98
1
Y
1
A
CD
ARG
97
A
CD
ARG
98
1
Y
1
A
NE
ARG
97
A
NE
ARG
98
1
Y
1
A
CZ
ARG
97
A
CZ
ARG
98
1
Y
1
A
NH1
ARG
97
A
NH1
ARG
98
1
Y
1
A
NH2
ARG
97
A
NH2
ARG
98
1
Y
1
A
CG
LYS
101
A
CG
LYS
102
1
Y
1
A
CD
LYS
101
A
CD
LYS
102
1
Y
1
A
CE
LYS
101
A
CE
LYS
102
1
Y
1
A
NZ
LYS
101
A
NZ
LYS
102
1
Y
1
A
CG
ARG
108
A
CG
ARG
109
1
Y
1
A
CD
ARG
108
A
CD
ARG
109
1
Y
1
A
NE
ARG
108
A
NE
ARG
109
1
Y
1
A
CZ
ARG
108
A
CZ
ARG
109
1
Y
1
A
NH1
ARG
108
A
NH1
ARG
109
1
Y
1
A
NH2
ARG
108
A
NH2
ARG
109
1
Y
1
A
CG
LYS
110
A
CG
LYS
111
1
Y
1
A
CD
LYS
110
A
CD
LYS
111
1
Y
1
A
CE
LYS
110
A
CE
LYS
111
1
Y
1
A
NZ
LYS
110
A
NZ
LYS
111
1
Y
1
A
CE
LYS
170
A
CE
LYS
171
1
Y
1
A
NZ
LYS
170
A
NZ
LYS
171
1
Y
1
A
CG
ASP
174
A
CG
ASP
175
1
Y
1
A
OD1
ASP
174
A
OD1
ASP
175
1
Y
1
A
OD2
ASP
174
A
OD2
ASP
175
1
Y
1
A
CD
ARG
196
A
CD
ARG
197
1
Y
1
A
NE
ARG
196
A
NE
ARG
197
1
Y
1
A
CZ
ARG
196
A
CZ
ARG
197
1
Y
1
A
NH1
ARG
196
A
NH1
ARG
197
1
Y
1
A
NH2
ARG
196
A
NH2
ARG
197
1
Y
1
A
CG
GLN
200
A
CG
GLN
201
1
Y
1
A
CD
GLN
200
A
CD
GLN
201
1
Y
1
A
OE1
GLN
200
A
OE1
GLN
201
1
Y
1
A
NE2
GLN
200
A
NE2
GLN
201
1
Y
1
A
CD
LYS
201
A
CD
LYS
202
1
Y
1
A
CE
LYS
201
A
CE
LYS
202
1
Y
1
A
NZ
LYS
201
A
NZ
LYS
202
1
Y
1
B
OD1
ASP
7
B
OD1
ASP
8
1
Y
1
B
OD2
ASP
7
B
OD2
ASP
8
1
Y
1
B
CG
LEU
23
B
CG
LEU
24
1
Y
1
B
CD1
LEU
23
B
CD1
LEU
24
1
Y
1
B
CD2
LEU
23
B
CD2
LEU
24
1
Y
1
B
CG
ASP
24
B
CG
ASP
25
1
Y
1
B
OD1
ASP
24
B
OD1
ASP
25
1
Y
1
B
OD2
ASP
24
B
OD2
ASP
25
1
Y
1
B
CG
LYS
26
B
CG
LYS
27
1
Y
1
B
CD
LYS
26
B
CD
LYS
27
1
Y
1
B
CE
LYS
26
B
CE
LYS
27
1
Y
1
B
NZ
LYS
26
B
NZ
LYS
27
1
Y
1
B
CD
GLU
50
B
CD
GLU
51
1
Y
1
B
OE1
GLU
50
B
OE1
GLU
51
1
Y
1
B
OE2
GLU
50
B
OE2
GLU
51
1
Y
1
B
CG
LYS
51
B
CG
LYS
52
1
Y
1
B
CD
LYS
51
B
CD
LYS
52
1
Y
1
B
CE
LYS
51
B
CE
LYS
52
1
Y
1
B
NZ
LYS
51
B
NZ
LYS
52
1
Y
1
B
CE
LYS
54
B
CE
LYS
55
1
Y
1
B
NZ
LYS
54
B
NZ
LYS
55
1
Y
1
B
CZ
ARG
68
B
CZ
ARG
69
1
Y
1
B
NH1
ARG
68
B
NH1
ARG
69
1
Y
1
B
NH2
ARG
68
B
NH2
ARG
69
1
Y
1
B
CG
GLU
73
B
CG
GLU
74
1
Y
1
B
CD
GLU
73
B
CD
GLU
74
1
Y
1
B
OE1
GLU
73
B
OE1
GLU
74
1
Y
1
B
OE2
GLU
73
B
OE2
GLU
74
1
Y
1
B
CG
LYS
95
B
CG
LYS
96
1
Y
1
B
CD
LYS
95
B
CD
LYS
96
1
Y
1
B
CE
LYS
95
B
CE
LYS
96
1
Y
1
B
NZ
LYS
95
B
NZ
LYS
96
1
Y
1
B
CG
ARG
108
B
CG
ARG
109
1
Y
1
B
CD
ARG
108
B
CD
ARG
109
1
Y
1
B
NE
ARG
108
B
NE
ARG
109
1
Y
1
B
CZ
ARG
108
B
CZ
ARG
109
1
Y
1
B
NH1
ARG
108
B
NH1
ARG
109
1
Y
1
B
NH2
ARG
108
B
NH2
ARG
109
1
Y
1
B
CE
LYS
110
B
CE
LYS
111
1
Y
1
B
NZ
LYS
110
B
NZ
LYS
111
1
Y
1
A
GLY
0
A
GLY
1
1
Y
1
A
SER
1
A
SER
2
1
Y
1
A
GLY
2
A
GLY
3
1
Y
1
A
ALA
3
A
ALA
4
1
Y
1
A
PRO
4
A
PRO
5
1
Y
1
A
PRO
5
A
PRO
6
1
Y
1
A
THR
6
A
THR
7
1
Y
1
A
SER
142
A
SER
143
1
Y
1
A
MSE
143
A
MSE
144
1
Y
1
A
ASP
144
A
ASP
145
1
Y
1
A
GLY
145
A
GLY
146
1
Y
1
A
ASP
146
A
ASP
147
1
Y
1
A
VAL
206
A
VAL
207
1
Y
1
A
GLU
207
A
GLU
208
1
Y
1
A
HIS
208
A
HIS
209
1
Y
1
B
GLY
0
B
GLY
1
1
Y
1
B
SER
1
B
SER
2
1
Y
1
B
GLY
2
B
GLY
3
1
Y
1
B
ALA
3
B
ALA
4
1
Y
1
B
PRO
4
B
PRO
5
1
Y
1
B
PRO
5
B
PRO
6
1
Y
1
B
THR
6
B
THR
7
1
Y
1
B
ILE
74
B
ILE
75
1
Y
1
B
LYS
75
B
LYS
76
1
Y
1
B
VAL
76
B
VAL
77
1
Y
1
B
LYS
77
B
LYS
78
1
Y
1
B
GLY
78
B
GLY
79
1
Y
1
B
GLN
79
B
GLN
80
1
Y
1
B
ASP
80
B
ASP
81
1
Y
1
B
MSE
81
B
MSE
82
1
Y
1
B
VAL
141
B
VAL
142
1
Y
1
B
SER
142
B
SER
143
1
Y
1
B
MSE
143
B
MSE
144
1
Y
1
B
ASP
144
B
ASP
145
1
Y
1
B
GLY
145
B
GLY
146
1
Y
1
B
ASP
146
B
ASP
147
1
Y
1
B
THR
147
B
THR
148
1
Y
1
B
VAL
206
B
VAL
207
1
Y
1
B
GLU
207
B
GLU
208
1
Y
1
B
HIS
208
B
HIS
209
1
Y
1
A
CYS
31
-166.84
-169.66
1
A
LYS
77
-40.24
108.66
1
A
VAL
140
58.15
70.46
1
A
MSE
148
-108.59
64.23
1
A
ALA
156
179.72
154.30
1
A
ASP
171
-101.20
67.63
1
B
CYS
31
-167.63
-169.86
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
35.6
-5.94
-1.29
0.00
-5.94
0.00
11.89
0.245
0.006
0.218
0.218
1.90
26.76
1288
25721
5.0
99.8
RANDOM
4405866.34
1
RESTRAINED
THROUGHOUT
0.0
MAD
MAXIMUM LIKELIHOOD F
FLAT MODEL
55.6554
0.38098
0.24
0.24
5.00
0.25
0.26
1.90
26.76
98
2830
0
0
2732
0.006
1.3
26.6
0.78
0.301
0.021
0.304
2.02
209
4065
6
4.9
100.0
23.0
1.900
26.800
2BHG
25640
0.000
0.05000
1
12.5000
3.100
99.6
0.37000
1.90
2.00
2.200
1
3.10
99.9
refinement
CNS
1.1
data reduction
MOSFLM
data scaling
SCALA
phasing
SHELX
FOOT-AND-MOUTH DISEASE VIRUS 3C PROTEASE (E.C.3.4.22.28)
3C protease from type A10(61) foot-and-mouth disease virus
1
N
N
1
N
N
2
N
N
2
N
N
A
ASP
7
A
ASP
8
HELX_P
A
ASN
15
A
ASN
16
1
1
9
A
ARG
45
A
ARG
46
HELX_P
A
ALA
49
A
ALA
50
1
2
5
A
THR
63
A
THR
64
HELX_P
A
SER
65
A
SER
66
5
3
3
A
ILE
99
A
ILE
100
HELX_P
A
HIS
102
A
HIS
103
5
4
4
A
SER
195
A
SER
196
HELX_P
A
HIS
205
A
HIS
206
1
5
11
B
ASP
7
B
ASP
8
HELX_P
B
ASN
15
B
ASN
16
1
6
9
B
ARG
45
B
ARG
46
HELX_P
B
ALA
49
B
ALA
50
1
7
5
B
THR
63
B
THR
64
HELX_P
B
SER
65
B
SER
66
5
8
3
B
ILE
99
B
ILE
100
HELX_P
B
PHE
103
B
PHE
104
5
9
5
B
SER
195
B
SER
196
HELX_P
B
HIS
205
B
HIS
206
1
10
11
covale
1.328
A
LYS
10
A
C
LYS
11
1_555
A
MSE
11
A
N
MSE
12
1_555
covale
1.328
A
MSE
11
A
C
MSE
12
1_555
A
VAL
12
A
N
VAL
13
1_555
covale
1.330
A
VAL
12
A
C
VAL
13
1_555
A
MSE
13
A
N
MSE
14
1_555
covale
1.331
A
MSE
13
A
C
MSE
14
1_555
A
GLY
14
A
N
GLY
15
1_555
covale
1.327
A
ILE
55
A
C
ILE
56
1_555
A
MSE
56
A
N
MSE
57
1_555
covale
1.329
A
MSE
56
A
C
MSE
57
1_555
A
LEU
57
A
N
LEU
58
1_555
covale
1.332
A
ALA
61
A
C
ALA
62
1_555
A
MSE
62
A
N
MSE
63
1_555
covale
1.328
A
MSE
62
A
C
MSE
63
1_555
A
THR
63
A
N
THR
64
1_555
covale
1.325
A
ASP
80
A
C
ASP
81
1_555
A
MSE
81
A
N
MSE
82
1_555
covale
1.326
A
MSE
81
A
C
MSE
82
1_555
A
LEU
82
A
N
LEU
83
1_555
covale
1.329
A
LEU
87
A
C
LEU
88
1_555
A
MSE
88
A
N
MSE
89
1_555
covale
1.329
A
MSE
88
A
C
MSE
89
1_555
A
VAL
89
A
N
VAL
90
1_555
covale
1.329
A
ARG
108
A
C
ARG
109
1_555
A
MSE
109
A
N
MSE
110
1_555
covale
1.327
A
MSE
109
A
C
MSE
110
1_555
A
LYS
110
A
N
LYS
111
1_555
covale
1.326
A
THR
147
A
C
THR
148
1_555
A
MSE
148
A
N
MSE
149
1_555
covale
1.341
A
MSE
148
A
C
MSE
149
1_555
A
PRO
149
A
N
PRO
150
1_555
covale
1.330
A
SER
197
A
C
SER
198
1_555
A
MSE
198
A
N
MSE
199
1_555
covale
1.332
A
MSE
198
A
C
MSE
199
1_555
A
LEU
199
A
N
LEU
200
1_555
covale
1.329
A
LYS
201
A
C
LYS
202
1_555
A
MSE
202
A
N
MSE
203
1_555
covale
1.331
A
MSE
202
A
C
MSE
203
1_555
A
LYS
203
A
N
LYS
204
1_555
covale
1.327
B
LYS
10
B
C
LYS
11
1_555
B
MSE
11
B
N
MSE
12
1_555
covale
1.326
B
MSE
11
B
C
MSE
12
1_555
B
VAL
12
B
N
VAL
13
1_555
covale
1.331
B
VAL
12
B
C
VAL
13
1_555
B
MSE
13
B
N
MSE
14
1_555
covale
1.330
B
MSE
13
B
C
MSE
14
1_555
B
GLY
14
B
N
GLY
15
1_555
covale
1.327
B
ILE
55
B
C
ILE
56
1_555
B
MSE
56
B
N
MSE
57
1_555
covale
1.325
B
MSE
56
B
C
MSE
57
1_555
B
LEU
57
B
N
LEU
58
1_555
covale
1.328
B
ALA
61
B
C
ALA
62
1_555
B
MSE
62
B
N
MSE
63
1_555
covale
1.331
B
MSE
62
B
C
MSE
63
1_555
B
THR
63
B
N
THR
64
1_555
covale
1.329
B
LEU
87
B
C
LEU
88
1_555
B
MSE
88
B
N
MSE
89
1_555
covale
1.328
B
MSE
88
B
C
MSE
89
1_555
B
VAL
89
B
N
VAL
90
1_555
covale
1.327
B
ARG
108
B
C
ARG
109
1_555
B
MSE
109
B
N
MSE
110
1_555
covale
1.328
B
MSE
109
B
C
MSE
110
1_555
B
LYS
110
B
N
LYS
111
1_555
covale
1.347
B
MSE
148
B
C
MSE
149
1_555
B
PRO
149
B
N
PRO
150
1_555
covale
1.334
B
SER
197
B
C
SER
198
1_555
B
MSE
198
B
N
MSE
199
1_555
covale
1.330
B
MSE
198
B
C
MSE
199
1_555
B
LEU
199
B
N
LEU
200
1_555
covale
1.327
B
LYS
201
B
C
LYS
202
1_555
B
MSE
202
B
N
MSE
203
1_555
covale
1.328
B
MSE
202
B
C
MSE
203
1_555
B
LYS
203
B
N
LYS
204
1_555
HYDROLASE
FOOT-AND-MOUTH DISEASE VIRUS, PROTEASE, CHYMOTRYPSIN-LIKE CYSTEINE PROTEASE, CAPSID PROTEIN, CORE PROTEIN, COVALENT PROTEIN-RNA LINKAGE, HYDROLASE, LIPOPROTEIN, MYRISTATE, POLYPROTEIN, RNA-DIRECTED RNA POLYMERASE, THIOL PROTEASE, TRANSFERASE
given
0.878580
0.456310
-0.140990
0.457790
-0.888750
-0.023683
-0.140990
-0.043737
-0.989730
0.26814
4.66770
10.78000
2BHG
PDB
1
2BHG
POLG_FMDV1
UNP
1
P03306
0
0
2BHG
0
0
2BHG
A
1
1
1
1650
1738
2BHG
1
89
P03306
A
2
2
90
1740
1857
2BHG
90
207
P03306
A
2
91
208
208
208
2BHG
208
208
2BHG
A
1
209
209
0
0
2BHG
0
0
2BHG
B
1
1
1
1650
1738
2BHG
1
89
P03306
B
2
2
90
1740
1857
2BHG
90
207
P03306
B
2
91
208
208
208
2BHG
208
208
2BHG
B
1
209
209
1
CYS
engineered mutation
LYS
95
2BHG
A
P03306
UNP
95
96
1
CYS
engineered mutation
ALA
163
2BHG
A
P03306
UNP
163
164
5
CYS
engineered mutation
LYS
95
2BHG
B
P03306
UNP
95
96
5
CYS
engineered mutation
ALA
163
2BHG
B
P03306
UNP
163
164
1
ARG
conflict
GLY
78
2BHG
A
P03306
UNP
1726
79
1
THR
conflict
GLN
79
2BHG
A
P03306
UNP
1727
80
1
GLY
conflict
ASP
80
2BHG
A
P03306
UNP
1728
81
1
HIS
conflict
MSE
81
2BHG
A
P03306
UNP
1729
82
1
ALA
conflict
LEU
82
2BHG
A
P03306
UNP
1730
83
1
LEU
conflict
SER
83
2BHG
A
P03306
UNP
1731
84
1
ARG
conflict
ASP
84
2BHG
A
P03306
UNP
1732
85
1
ARG
conflict
ALA
85
2BHG
A
P03306
UNP
1733
86
1
GLY
conflict
ALA
86
2BHG
A
P03306
UNP
1734
87
1
THR
conflict
LEU
87
2BHG
A
P03306
UNP
1735
88
1
HIS
conflict
MSE
88
2BHG
A
P03306
UNP
1736
89
1
TRP
conflict
VAL
89
2BHG
A
P03306
UNP
1737
90
5
ALA
conflict
LEU
82
2BHG
B
P03306
UNP
1730
83
5
LEU
conflict
SER
83
2BHG
B
P03306
UNP
1731
84
5
ARG
conflict
ASP
84
2BHG
B
P03306
UNP
1732
85
5
ARG
conflict
ALA
85
2BHG
B
P03306
UNP
1733
86
5
GLY
conflict
ALA
86
2BHG
B
P03306
UNP
1734
87
5
THR
conflict
LEU
87
2BHG
B
P03306
UNP
1735
88
5
HIS
conflict
MSE
88
2BHG
B
P03306
UNP
1736
89
5
TRP
conflict
VAL
89
2BHG
B
P03306
UNP
1737
90
7
2
2
7
7
2
7
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ARG
60
A
ARG
61
A
MSE
62
A
MSE
63
A
LYS
54
A
LYS
55
A
LEU
57
A
LEU
58
A
THR
16
A
THR
17
A
LEU
23
A
LEU
24
A
LYS
26
A
LYS
27
A
PHE
37
A
PHE
38
A
ALA
40
A
ALA
41
A
PRO
44
A
PRO
45
A
ALA
85
A
ALA
86
A
LEU
90
A
LEU
91
A
TYR
67
A
TYR
68
A
PHE
70
A
PHE
71
A
GLU
73
A
GLU
74
A
ILE
74
A
ILE
75
A
MSE
81
A
MSE
82
A
LEU
82
A
LEU
83
A
ARG
108
A
ARG
109
A
MSE
109
A
MSE
110
A
LYS
137
A
LYS
138
A
ASP
138
A
ASP
139
A
PRO
114
A
PRO
115
A
ASN
121
A
ASN
122
A
GLY
125
A
GLY
126
A
ALA
133
A
ALA
134
A
LEU
151
A
LEU
152
A
LYS
155
A
LYS
156
A
VAL
188
A
VAL
189
A
CYS
193
A
CYS
194
A
ASP
174
A
ASP
175
A
GLY
185
A
GLY
186
A
ALA
166
A
ALA
167
A
ASP
171
A
ASP
172
A
PRO
114
A
PRO
115
A
ASN
121
A
ASN
122
B
ARG
60
B
ARG
61
B
MSE
62
B
MSE
63
B
LYS
54
B
LYS
55
B
LEU
57
B
LEU
58
B
THR
16
B
THR
17
B
LEU
23
B
LEU
24
B
LYS
26
B
LYS
27
B
PHE
37
B
PHE
38
B
ALA
40
B
ALA
41
B
PRO
44
B
PRO
45
B
ALA
85
B
ALA
86
B
LEU
90
B
LEU
91
B
TYR
67
B
TYR
68
B
PHE
70
B
PHE
71
B
ARG
108
B
ARG
109
B
MSE
109
B
MSE
110
B
LYS
137
B
LYS
138
B
ASP
138
B
ASP
139
B
PRO
114
B
PRO
115
B
ASN
121
B
ASN
122
B
GLY
125
B
GLY
126
B
ALA
133
B
ALA
134
B
LEU
151
B
LEU
152
B
ALA
156
B
ALA
157
B
VAL
188
B
VAL
189
B
CYS
193
B
CYS
194
B
THR
175
B
THR
176
B
GLY
185
B
GLY
186
B
ALA
166
B
ALA
167
B
LYS
170
B
LYS
171
B
PRO
114
B
PRO
115
B
ASN
121
B
ASN
122
146
H 3