0.018305 0.000000 0.000000 0.000000 0.018305 0.000000 0.000000 0.000000 0.004673 0.00000 0.00000 0.00000 Kang, B.S. Cho, H.J. Kim, K.J. Kwon, O.S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 54.631 54.631 213.985 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be Published 0353 Crystal Structure of Human Pyridoxal 5'-Phosphate Phosphatase 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 CCD 2005-02-02 ADSC CCD SINGLE WAVELENGTH M x-ray 1 1.1271 1.0 6B PAL/PLS 1.1271 SYNCHROTRON PAL/PLS BEAMLINE 6B 31866.275 PYRIDOXAL PHOSPHATE PHOSPHATASE 3.1.3.74 1 man polymer 24.305 MAGNESIUM ION 2 syn non-polymer 18.015 water 88 nat water PYRIDOXAL 5'-PHOSPHATE PHOSPHATASE, PLP PHOSPHATASE no no GAMARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG GLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAK LREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGD RLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLED GAMARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG GLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAK LREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGD RLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLED A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n HUMAN sample 9606 HOMO SAPIENS 511693 ESCHERICHIA COLI BL21 1 2.48 50.04 repository Initial release Version format compliance Version format compliance 1 0 2007-02-27 1 1 2011-05-08 1 2 2011-07-13 CRYSTAL STRUCTURE OF HUMAN PYRIDOXAL 5'- PHOSPHATE PHOSPHATASE CRYSTAL STRUCTURE OF HUMAN PYRIDOXAL 5'- PHOSPHATE PHOSPHATASE WITH ITS SUBSTRATE PDBE Y PDBE 2006-02-23 REL MG MAGNESIUM ION HOH water TWO RESIDUES, GLY-ALA AT N-TERMINUS ARE ARTEFACTS FROM CLONING VECTOR. MG 1296 2 MG MG 1296 A MG 1297 2 MG MG 1297 A HOH 2001 3 HOH HOH 2001 A HOH 2002 3 HOH HOH 2002 A HOH 2003 3 HOH HOH 2003 A HOH 2004 3 HOH HOH 2004 A HOH 2005 3 HOH HOH 2005 A HOH 2006 3 HOH HOH 2006 A HOH 2007 3 HOH HOH 2007 A HOH 2008 3 HOH HOH 2008 A HOH 2009 3 HOH HOH 2009 A HOH 2010 3 HOH HOH 2010 A HOH 2011 3 HOH HOH 2011 A HOH 2012 3 HOH HOH 2012 A HOH 2013 3 HOH HOH 2013 A HOH 2014 3 HOH HOH 2014 A HOH 2015 3 HOH HOH 2015 A HOH 2016 3 HOH HOH 2016 A HOH 2017 3 HOH HOH 2017 A HOH 2018 3 HOH HOH 2018 A HOH 2019 3 HOH HOH 2019 A HOH 2020 3 HOH HOH 2020 A HOH 2021 3 HOH HOH 2021 A HOH 2022 3 HOH HOH 2022 A HOH 2023 3 HOH HOH 2023 A HOH 2024 3 HOH HOH 2024 A HOH 2025 3 HOH HOH 2025 A HOH 2026 3 HOH HOH 2026 A HOH 2027 3 HOH HOH 2027 A HOH 2028 3 HOH HOH 2028 A HOH 2029 3 HOH HOH 2029 A HOH 2030 3 HOH HOH 2030 A HOH 2031 3 HOH HOH 2031 A HOH 2032 3 HOH HOH 2032 A HOH 2033 3 HOH HOH 2033 A HOH 2034 3 HOH HOH 2034 A HOH 2035 3 HOH HOH 2035 A HOH 2036 3 HOH HOH 2036 A HOH 2037 3 HOH HOH 2037 A HOH 2038 3 HOH HOH 2038 A HOH 2039 3 HOH HOH 2039 A HOH 2040 3 HOH HOH 2040 A HOH 2041 3 HOH HOH 2041 A HOH 2042 3 HOH HOH 2042 A HOH 2043 3 HOH HOH 2043 A HOH 2044 3 HOH HOH 2044 A HOH 2045 3 HOH HOH 2045 A HOH 2046 3 HOH HOH 2046 A HOH 2047 3 HOH HOH 2047 A HOH 2048 3 HOH HOH 2048 A HOH 2049 3 HOH HOH 2049 A HOH 2050 3 HOH HOH 2050 A HOH 2051 3 HOH HOH 2051 A HOH 2052 3 HOH HOH 2052 A HOH 2053 3 HOH HOH 2053 A HOH 2054 3 HOH HOH 2054 A HOH 2055 3 HOH HOH 2055 A HOH 2056 3 HOH HOH 2056 A HOH 2057 3 HOH HOH 2057 A HOH 2058 3 HOH HOH 2058 A HOH 2059 3 HOH HOH 2059 A HOH 2060 3 HOH HOH 2060 A HOH 2061 3 HOH HOH 2061 A HOH 2062 3 HOH HOH 2062 A HOH 2063 3 HOH HOH 2063 A HOH 2064 3 HOH HOH 2064 A HOH 2065 3 HOH HOH 2065 A HOH 2066 3 HOH HOH 2066 A HOH 2067 3 HOH HOH 2067 A HOH 2068 3 HOH HOH 2068 A HOH 2069 3 HOH HOH 2069 A HOH 2070 3 HOH HOH 2070 A HOH 2071 3 HOH HOH 2071 A HOH 2072 3 HOH HOH 2072 A HOH 2073 3 HOH HOH 2073 A HOH 2074 3 HOH HOH 2074 A HOH 2075 3 HOH HOH 2075 A HOH 2076 3 HOH HOH 2076 A HOH 2077 3 HOH HOH 2077 A HOH 2078 3 HOH HOH 2078 A HOH 2079 3 HOH HOH 2079 A HOH 2080 3 HOH HOH 2080 A HOH 2081 3 HOH HOH 2081 A HOH 2082 3 HOH HOH 2082 A HOH 2083 3 HOH HOH 2083 A HOH 2084 3 HOH HOH 2084 A HOH 2085 3 HOH HOH 2085 A HOH 2086 3 HOH HOH 2086 A HOH 2087 3 HOH HOH 2087 A HOH 2088 3 HOH HOH 2088 A n 1 -1 A n 2 0 A MET 1 n 3 MET 1 A ALA 2 n 4 ALA 2 A ARG 3 n 5 ARG 3 A CYS 4 n 6 CYS 4 A GLU 5 n 7 GLU 5 A ARG 6 n 8 ARG 6 A LEU 7 n 9 LEU 7 A ARG 8 n 10 ARG 8 A GLY 9 n 11 GLY 9 A ALA 10 n 12 ALA 10 A ALA 11 n 13 ALA 11 A LEU 12 n 14 LEU 12 A ARG 13 n 15 ARG 13 A ASP 14 n 16 ASP 14 A VAL 15 n 17 VAL 15 A LEU 16 n 18 LEU 16 A GLY 17 n 19 GLY 17 A ARG 18 n 20 ARG 18 A ALA 19 n 21 ALA 19 A GLN 20 n 22 GLN 20 A GLY 21 n 23 GLY 21 A VAL 22 n 24 VAL 22 A LEU 23 n 25 LEU 23 A PHE 24 n 26 PHE 24 A ASP 25 n 27 ASP 25 A CYS 26 n 28 CYS 26 A ASP 27 n 29 ASP 27 A GLY 28 n 30 GLY 28 A VAL 29 n 31 VAL 29 A LEU 30 n 32 LEU 30 A TRP 31 n 33 TRP 31 A ASN 32 n 34 ASN 32 A GLY 33 n 35 GLY 33 A GLU 34 n 36 GLU 34 A ARG 35 n 37 ARG 35 A ALA 36 n 38 ALA 36 A VAL 37 n 39 VAL 37 A PRO 38 n 40 PRO 38 A GLY 39 n 41 GLY 39 A ALA 40 n 42 ALA 40 A PRO 41 n 43 PRO 41 A GLU 42 n 44 GLU 42 A LEU 43 n 45 LEU 43 A LEU 44 n 46 LEU 44 A GLU 45 n 47 GLU 45 A ARG 46 n 48 ARG 46 A LEU 47 n 49 LEU 47 A ALA 48 n 50 ALA 48 A ARG 49 n 51 ARG 49 A ALA 50 n 52 ALA 50 A GLY 51 n 53 GLY 51 A LYS 52 n 54 LYS 52 A ALA 53 n 55 ALA 53 A ALA 54 n 56 ALA 54 A LEU 55 n 57 LEU 55 A PHE 56 n 58 PHE 56 A VAL 57 n 59 VAL 57 A SER 58 n 60 SER 58 A ASN 59 n 61 ASN 59 A ASN 60 n 62 ASN 60 A SER 61 n 63 SER 61 A ARG 62 n 64 ARG 62 A ARG 63 n 65 ARG 63 A ALA 64 n 66 ALA 64 A ARG 65 n 67 ARG 65 A PRO 66 n 68 PRO 66 A GLU 67 n 69 GLU 67 A LEU 68 n 70 LEU 68 A ALA 69 n 71 ALA 69 A LEU 70 n 72 LEU 70 A ARG 71 n 73 ARG 71 A PHE 72 n 74 PHE 72 A ALA 73 n 75 ALA 73 A ARG 74 n 76 ARG 74 A LEU 75 n 77 LEU 75 A GLY 76 n 78 GLY 76 A PHE 77 n 79 PHE 77 A GLY 78 n 80 GLY 78 A GLY 79 n 81 GLY 79 A LEU 80 n 82 LEU 80 A ARG 81 n 83 ARG 81 A ALA 82 n 84 ALA 82 A GLU 83 n 85 GLU 83 A GLN 84 n 86 GLN 84 A LEU 85 n 87 LEU 85 A PHE 86 n 88 PHE 86 A SER 87 n 89 SER 87 A SER 88 n 90 SER 88 A ALA 89 n 91 ALA 89 A LEU 90 n 92 LEU 90 A CYS 91 n 93 CYS 91 A ALA 92 n 94 ALA 92 A ALA 93 n 95 ALA 93 A ARG 94 n 96 ARG 94 A LEU 95 n 97 LEU 95 A LEU 96 n 98 LEU 96 A ARG 97 n 99 ARG 97 A GLN 98 n 100 GLN 98 A ARG 99 n 101 ARG 99 A LEU 100 n 102 LEU 100 A PRO 101 n 103 PRO 101 A GLY 102 n 104 GLY 102 A PRO 103 n 105 PRO 103 A PRO 104 n 106 PRO 104 A ASP 105 n 107 ASP 105 A n 108 106 A n 109 107 A GLY 108 n 110 GLY 108 A ALA 109 n 111 ALA 109 A VAL 110 n 112 VAL 110 A PHE 111 n 113 PHE 111 A VAL 112 n 114 VAL 112 A LEU 113 n 115 LEU 113 A GLY 114 n 116 GLY 114 A GLY 115 n 117 GLY 115 A GLU 116 n 118 GLU 116 A GLY 117 n 119 GLY 117 A LEU 118 n 120 LEU 118 A ARG 119 n 121 ARG 119 A ALA 120 n 122 ALA 120 A GLU 121 n 123 GLU 121 A LEU 122 n 124 LEU 122 A ARG 123 n 125 ARG 123 A ALA 124 n 126 ALA 124 A ALA 125 n 127 ALA 125 A GLY 126 n 128 GLY 126 A LEU 127 n 129 LEU 127 A ARG 128 n 130 ARG 128 A LEU 129 n 131 LEU 129 A ALA 130 n 132 ALA 130 A GLY 131 n 133 GLY 131 A ASP 132 n 134 ASP 132 A PRO 133 n 135 PRO 133 A SER 134 n 136 SER 134 A ALA 135 n 137 ALA 135 A GLY 136 n 138 GLY 136 A ASP 137 n 139 ASP 137 A GLY 138 n 140 GLY 138 A ALA 139 n 141 ALA 139 A ALA 140 n 142 ALA 140 A PRO 141 n 143 PRO 141 A ARG 142 n 144 ARG 142 A VAL 143 n 145 VAL 143 A ARG 144 n 146 ARG 144 A ALA 145 n 147 ALA 145 A VAL 146 n 148 VAL 146 A LEU 147 n 149 LEU 147 A VAL 148 n 150 VAL 148 A GLY 149 n 151 GLY 149 A TYR 150 n 152 TYR 150 A ASP 151 n 153 ASP 151 A GLU 152 n 154 GLU 152 A HIS 153 n 155 HIS 153 A PHE 154 n 156 PHE 154 A SER 155 n 157 SER 155 A PHE 156 n 158 PHE 156 A ALA 157 n 159 ALA 157 A LYS 158 n 160 LYS 158 A LEU 159 n 161 LEU 159 A ARG 160 n 162 ARG 160 A GLU 161 n 163 GLU 161 A ALA 162 n 164 ALA 162 A CYS 163 n 165 CYS 163 A ALA 164 n 166 ALA 164 A HIS 165 n 167 HIS 165 A LEU 166 n 168 LEU 166 A ARG 167 n 169 ARG 167 A ASP 168 n 170 ASP 168 A PRO 169 n 171 PRO 169 A GLU 170 n 172 GLU 170 A CYS 171 n 173 CYS 171 A LEU 172 n 174 LEU 172 A LEU 173 n 175 LEU 173 A VAL 174 n 176 VAL 174 A ALA 175 n 177 ALA 175 A THR 176 n 178 THR 176 A ASP 177 n 179 ASP 177 A ARG 178 n 180 ARG 178 A ASP 179 n 181 ASP 179 A PRO 180 n 182 PRO 180 A TRP 181 n 183 TRP 181 A HIS 182 n 184 HIS 182 A PRO 183 n 185 PRO 183 A LEU 184 n 186 LEU 184 A SER 185 n 187 SER 185 A ASP 186 n 188 ASP 186 A GLY 187 n 189 GLY 187 A SER 188 n 190 SER 188 A ARG 189 n 191 ARG 189 A THR 190 n 192 THR 190 A PRO 191 n 193 PRO 191 A GLY 192 n 194 GLY 192 A THR 193 n 195 THR 193 A GLY 194 n 196 GLY 194 A SER 195 n 197 SER 195 A LEU 196 n 198 LEU 196 A ALA 197 n 199 ALA 197 A ALA 198 n 200 ALA 198 A ALA 199 n 201 ALA 199 A VAL 200 n 202 VAL 200 A GLU 201 n 203 GLU 201 A THR 202 n 204 THR 202 A ALA 203 n 205 ALA 203 A SER 204 n 206 SER 204 A GLY 205 n 207 GLY 205 A ARG 206 n 208 ARG 206 A GLN 207 n 209 GLN 207 A ALA 208 n 210 ALA 208 A LEU 209 n 211 LEU 209 A VAL 210 n 212 VAL 210 A VAL 211 n 213 VAL 211 A GLY 212 n 214 GLY 212 A LYS 213 n 215 LYS 213 A PRO 214 n 216 PRO 214 A SER 215 n 217 SER 215 A PRO 216 n 218 PRO 216 A TYR 217 n 219 TYR 217 A MET 218 n 220 MET 218 A PHE 219 n 221 PHE 219 A GLU 220 n 222 GLU 220 A CYS 221 n 223 CYS 221 A ILE 222 n 224 ILE 222 A THR 223 n 225 THR 223 A GLU 224 n 226 GLU 224 A ASN 225 n 227 ASN 225 A PHE 226 n 228 PHE 226 A SER 227 n 229 SER 227 A ILE 228 n 230 ILE 228 A ASP 229 n 231 ASP 229 A PRO 230 n 232 PRO 230 A ALA 231 n 233 ALA 231 A ARG 232 n 234 ARG 232 A THR 233 n 235 THR 233 A LEU 234 n 236 LEU 234 A MET 235 n 237 MET 235 A VAL 236 n 238 VAL 236 A GLY 237 n 239 GLY 237 A ASP 238 n 240 ASP 238 A ARG 239 n 241 ARG 239 A LEU 240 n 242 LEU 240 A GLU 241 n 243 GLU 241 A THR 242 n 244 THR 242 A ASP 243 n 245 ASP 243 A ILE 244 n 246 ILE 244 A LEU 245 n 247 LEU 245 A PHE 246 n 248 PHE 246 A GLY 247 n 249 GLY 247 A HIS 248 n 250 HIS 248 A ARG 249 n 251 ARG 249 A CYS 250 n 252 CYS 250 A GLY 251 n 253 GLY 251 A MET 252 n 254 MET 252 A THR 253 n 255 THR 253 A THR 254 n 256 THR 254 A VAL 255 n 257 VAL 255 A LEU 256 n 258 LEU 256 A THR 257 n 259 THR 257 A LEU 258 n 260 LEU 258 A THR 259 n 261 THR 259 A GLY 260 n 262 GLY 260 A VAL 261 n 263 VAL 261 A SER 262 n 264 SER 262 A ARG 263 n 265 ARG 263 A LEU 264 n 266 LEU 264 A GLU 265 n 267 GLU 265 A GLU 266 n 268 GLU 266 A ALA 267 n 269 ALA 267 A GLN 268 n 270 GLN 268 A ALA 269 n 271 ALA 269 A TYR 270 n 272 TYR 270 A LEU 271 n 273 LEU 271 A ALA 272 n 274 ALA 272 A ALA 273 n 275 ALA 273 A GLY 274 n 276 GLY 274 A GLN 275 n 277 GLN 275 A HIS 276 n 278 HIS 276 A ASP 277 n 279 ASP 277 A LEU 278 n 280 LEU 278 A VAL 279 n 281 VAL 279 A PRO 280 n 282 PRO 280 A HIS 281 n 283 HIS 281 A TYR 282 n 284 TYR 282 A TYR 283 n 285 TYR 283 A VAL 284 n 286 VAL 284 A GLU 285 n 287 GLU 285 A SER 286 n 288 SER 286 A ILE 287 n 289 ILE 287 A ALA 288 n 290 ALA 288 A ASP 289 n 291 ASP 289 A LEU 290 n 292 LEU 290 A THR 291 n 293 THR 291 A GLU 292 n 294 GLU 292 A GLY 293 n 295 GLY 293 A LEU 294 n 296 LEU 294 A GLU 295 n 297 GLU 295 A n 298 296 A author_and_software_defined_assembly PQS 2 dimeric A HOH 2006 D O HOH 1_555 A MG 1296 B MG MG 1_555 A ASP 25 A OD2 ASP 27 1_555 100.0 A HOH 2006 D O HOH 1_555 A MG 1296 B MG MG 1_555 A ASP 27 A O ASP 29 1_555 95.7 A ASP 25 A OD2 ASP 27 1_555 A MG 1296 B MG MG 1_555 A ASP 27 A O ASP 29 1_555 92.6 A HOH 2006 D O HOH 1_555 A MG 1296 B MG MG 1_555 A ASP 238 A OD1 ASP 240 1_555 167.4 A ASP 25 A OD2 ASP 27 1_555 A MG 1296 B MG MG 1_555 A ASP 238 A OD1 ASP 240 1_555 87.2 A ASP 27 A O ASP 29 1_555 A MG 1296 B MG MG 1_555 A ASP 238 A OD1 ASP 240 1_555 94.3 A HOH 2006 D O HOH 1_555 A MG 1296 B MG MG 1_555 A HOH 2076 D O HOH 1_555 92.1 A ASP 25 A OD2 ASP 27 1_555 A MG 1296 B MG MG 1_555 A HOH 2076 D O HOH 1_555 167.9 A ASP 27 A O ASP 29 1_555 A MG 1296 B MG MG 1_555 A HOH 2076 D O HOH 1_555 86.0 A ASP 238 A OD1 ASP 240 1_555 A MG 1296 B MG MG 1_555 A HOH 2076 D O HOH 1_555 80.9 A HOH 2006 D O HOH 1_555 A MG 1296 B MG MG 1_555 A HOH 2078 D O HOH 1_555 86.0 A ASP 25 A OD2 ASP 27 1_555 A MG 1296 B MG MG 1_555 A HOH 2078 D O HOH 1_555 88.1 A ASP 27 A O ASP 29 1_555 A MG 1296 B MG MG 1_555 A HOH 2078 D O HOH 1_555 178.0 A ASP 238 A OD1 ASP 240 1_555 A MG 1296 B MG MG 1_555 A HOH 2078 D O HOH 1_555 83.9 A HOH 2076 D O HOH 1_555 A MG 1296 B MG MG 1_555 A HOH 2078 D O HOH 1_555 92.9 A HOH 2082 D O HOH 1_555 A MG 1297 C MG MG 1_555 A ARG 263 A NE ARG 265 1_555 104.2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 7_555 y,x,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 A O GLU 5 A O GLU 7 A N TYR 283 A N TYR 285 A N TYR 282 A N TYR 284 A O THR 254 A O THR 256 A N THR 253 A N THR 255 A O THR 233 A O THR 235 A N LEU 234 A N LEU 236 A O GLY 21 A O GLY 23 A N VAL 22 A N VAL 24 A O ALA 53 A O ALA 55 A N SER 58 A N SER 60 A O PHE 86 A O PHE 88 A N ASN 32 A N ASN 34 A O ARG 35 A O ARG 37 A O ARG 128 A O ARG 130 A N VAL 110 A N VAL 112 A O ALA 109 A O ALA 111 A N ARG 144 A N ARG 146 A N VAL 146 A N VAL 148 A O LEU 172 A O LEU 174 A N ALA 175 A N ALA 177 A O LEU 209 A O LEU 211 A N HIS 182 A N HIS 184 A O THR 190 A O THR 192 1 A CG ARG 3 A CG ARG 5 1 Y 1 A CD ARG 3 A CD ARG 5 1 Y 1 A NE ARG 3 A NE ARG 5 1 Y 1 A CZ ARG 3 A CZ ARG 5 1 Y 1 A NH1 ARG 3 A NH1 ARG 5 1 Y 1 A NH2 ARG 3 A NH2 ARG 5 1 Y 1 A CA ASP 105 A CA ASP 107 1 Y 1 A C ASP 105 A C ASP 107 1 Y 1 A O ASP 105 A O ASP 107 1 Y 1 A CB ASP 105 A CB ASP 107 1 Y 1 A CG ASP 105 A CG ASP 107 1 Y 1 A OD1 ASP 105 A OD1 ASP 107 1 Y 1 A OD2 ASP 105 A OD2 ASP 107 1 Y 1 A CA GLU 295 A CA GLU 297 1 Y 1 A C GLU 295 A C GLU 297 1 Y 1 A O GLU 295 A O GLU 297 1 Y 1 A CB GLU 295 A CB GLU 297 1 Y 1 A CG GLU 295 A CG GLU 297 1 Y 1 A CD GLU 295 A CD GLU 297 1 Y 1 A OE1 GLU 295 A OE1 GLU 297 1 Y 1 A OE2 GLU 295 A OE2 GLU 297 1 Y 1 A GLY -1 A GLY 1 1 Y 1 A ALA 0 A ALA 2 1 Y 1 A ALA 106 A ALA 108 1 Y 1 A PRO 107 A PRO 109 1 Y 1 A ASP 296 A ASP 298 1 Y 1 A CYS 26 -103.68 -71.56 1 A VAL 29 -129.64 -57.37 1 A PHE 77 -102.99 70.14 1 A LEU 100 -37.81 121.65 1 A ASP 186 -69.87 17.79 29.62 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.937 0.903 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 0.257 0.207 0.212 2.40 18.64 1332 12103 9.900 99.9 RANDOM 1 THROUGHOUT OTHER 0.457 0.279 0.80 0.80 1.20 MAXIMUM LIKELIHOOD MASK 2.40 18.64 88 2276 2 0 2186 0.013 0.021 2249 1.444 1.982 3047 6.755 5.000 289 31.121 21.373 102 16.678 15.000 358 17.726 15.000 32 0.089 0.200 339 0.005 0.020 1745 0.200 0.200 961 0.297 0.200 1505 0.162 0.200 113 0.194 0.200 42 0.201 0.200 6 0.780 1.500 1443 1.451 2.000 2284 1.984 3.000 806 3.296 4.500 763 0.2920 0.2680 2.46 101 849 20 2.400 20.000 2CFS 13489 2.000 0.06000 1 33.0000 7.000 100.0 refinement REFMAC 5.2.0005 PYRIDOXAL PHOSPHATE PHOSPHATASE (E.C.3.1.3.74) crystal structure of human pyridoxal 5'-phosphate phosphatase 1 N N 2 N N 2 N N 3 N N A ARG 8 A ARG 10 HELX_P A ALA 19 A ALA 21 1 1 12 A GLY 39 A GLY 41 HELX_P A ALA 50 A ALA 52 1 2 12 A ALA 64 A ALA 66 HELX_P A LEU 75 A LEU 77 1 3 12 A ARG 81 A ARG 83 HELX_P A GLU 83 A GLU 85 5 4 3 A SER 88 A SER 90 HELX_P A LEU 100 A LEU 102 1 5 13 A GLY 115 A GLY 117 HELX_P A ALA 125 A ALA 127 1 6 11 A SER 155 A SER 157 HELX_P A ARG 167 A ARG 169 1 7 13 A GLY 192 A GLY 194 HELX_P A GLY 205 A GLY 207 1 8 14 A PRO 216 A PRO 218 HELX_P A THR 223 A THR 225 1 9 8 A ASP 229 A ASP 231 HELX_P A ALA 231 A ALA 233 5 10 3 A THR 242 A THR 244 HELX_P A CYS 250 A CYS 252 1 11 9 A ARG 263 A ARG 265 HELX_P A ALA 273 A ALA 275 1 12 11 A GLN 275 A GLN 277 HELX_P A VAL 279 A VAL 281 5 13 5 A SER 286 A SER 288 HELX_P A LEU 294 A LEU 296 5 14 9 disulf 2.073 A CYS 91 A SG CYS 93 1_555 A CYS 221 A SG CYS 223 1_555 metalc 1.919 A MG 1296 B MG MG 1_555 A HOH 2006 D O HOH 1_555 metalc 2.032 A MG 1296 B MG MG 1_555 A ASP 25 A OD2 ASP 27 1_555 metalc 2.270 A MG 1296 B MG MG 1_555 A ASP 27 A O ASP 29 1_555 metalc 2.140 A MG 1296 B MG MG 1_555 A ASP 238 A OD1 ASP 240 1_555 metalc 2.085 A MG 1296 B MG MG 1_555 A HOH 2076 D O HOH 1_555 metalc 2.044 A MG 1296 B MG MG 1_555 A HOH 2078 D O HOH 1_555 metalc 3.143 A MG 1297 C MG MG 1_555 A HOH 2082 D O HOH 1_555 metalc 2.976 A MG 1297 C MG MG 1_555 A ARG 263 A NE ARG 265 1_555 HYDROLASE PHOSPHATASE, CHRONOPHIN, HAD FAMILY, HYDROLASE, MAGNESIUM, METAL-BINDING, PYRIDOXAL PHOSPHATE A LYS 213 A LYS 215 1 A PRO 214 A PRO 216 2.19 2CFS PDB 1 2CFS PLPP_HUMAN UNP 1 Q96GD0 -1 0 2CFS -1 0 2CFS A 1 1 2 1 296 2CFS 1 296 Q96GD0 A 2 3 298 7 2 5 2 parallel parallel parallel parallel parallel parallel anti-parallel parallel parallel parallel parallel anti-parallel A GLU 5 A GLU 7 A ARG 6 A ARG 8 A TYR 282 A TYR 284 A VAL 284 A VAL 286 A THR 253 A THR 255 A THR 257 A THR 259 A THR 233 A THR 235 A GLY 237 A GLY 239 A GLY 21 A GLY 23 A PHE 24 A PHE 26 A ALA 53 A ALA 55 A SER 58 A SER 60 A LEU 85 A LEU 87 A SER 87 A SER 89 A TRP 31 A TRP 33 A ASN 32 A ASN 34 A ARG 35 A ARG 37 A ALA 36 A ALA 38 A ARG 128 A ARG 130 A LEU 129 A LEU 131 A ALA 109 A ALA 111 A LEU 113 A LEU 115 A VAL 143 A VAL 145 A VAL 148 A VAL 150 A LEU 172 A LEU 174 A ALA 175 A ALA 177 A LEU 209 A LEU 211 A VAL 210 A VAL 212 A TRP 181 A TRP 183 A PRO 183 A PRO 185 A ARG 189 A ARG 191 A PRO 191 A PRO 193 BINDING SITE FOR RESIDUE MG A1296 Software 6 BINDING SITE FOR RESIDUE MG A1297 Software 2 A ASP 25 A ASP 27 6 1_555 A ASP 27 A ASP 29 6 1_555 A ASP 238 A ASP 240 6 1_555 A HOH 2006 D HOH 6 1_555 A HOH 2076 D HOH 6 1_555 A HOH 2078 D HOH 6 1_555 A ARG 263 A ARG 265 2 1_555 A LEU 264 A LEU 266 2 1_555 96 P 43 21 2