0.019105
0.000000
0.000000
0.000000
0.015540
0.000000
0.000000
0.000000
0.009923
0.00000
0.00000
0.00000
Debreczeni, J.E.
Barr, A.J.
Eswaran, J.
Smee, C.
Burgess, N.
Gileadi, O.
Savitsky, P.
Sundstrom, M.
Arrowsmith, C.
Edwards, A.
Weigelt, J.
Knapp, S.
von Delft, F.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
52.342
64.348
100.781
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C9 H12 N O6 P
261.168
n
O-PHOSPHOTYROSINE
PHOSPHONOTYROSINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
C
N
89
N
O
N
90
N
C
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
N
N
99
S
C
N
100
N
C
N
101
N
O
N
102
N
C
N
103
N
C
N
104
N
C
N
105
N
O
N
106
N
N
N
107
N
O
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
N
N
119
S
C
N
120
N
C
N
121
N
O
N
122
N
C
N
123
N
C
N
124
N
C
N
125
N
O
N
126
N
O
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
N
C
N
139
N
C
N
140
N
O
N
141
N
O
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
N
C
Y
152
N
C
Y
153
N
N
Y
154
N
C
Y
155
N
C
Y
156
N
N
N
157
N
O
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
O
N
169
N
H
N
170
N
H
N
171
N
N
N
172
S
C
N
173
N
C
N
174
N
O
N
175
S
C
N
176
N
C
N
177
N
C
N
178
N
C
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
N
N
194
S
C
N
195
N
C
N
196
N
O
N
197
N
C
N
198
N
C
N
199
N
C
N
200
N
C
N
201
N
O
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
N
N
216
S
C
N
217
N
C
N
218
N
O
N
219
N
C
N
220
N
C
N
221
N
C
N
222
N
C
N
223
N
N
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
N
N
241
S
C
N
242
N
C
N
243
N
O
N
244
N
C
N
245
N
C
N
246
N
S
N
247
N
C
N
248
N
O
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
N
N
261
S
C
N
262
N
C
N
263
N
O
N
264
N
C
Y
265
N
C
Y
266
N
C
Y
267
N
C
Y
268
N
C
Y
269
N
C
Y
270
N
C
N
271
N
O
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
N
N
284
S
C
N
285
N
C
N
286
N
O
N
287
N
C
N
288
N
C
N
289
N
C
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
N
O
N
305
N
C
Y
306
N
C
Y
307
N
C
Y
308
N
C
Y
309
N
C
Y
310
N
C
Y
311
N
C
N
312
N
O
N
313
N
P
N
314
N
O
N
315
N
O
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
N
N
330
S
C
N
331
N
C
N
332
N
O
N
333
N
C
N
334
N
O
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
N
N
344
S
C
N
345
N
C
N
346
N
O
N
347
R
C
N
348
N
O
N
349
N
C
N
350
N
O
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
N
N
361
S
C
N
362
N
C
N
363
N
O
N
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
N
Y
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
C
Y
373
N
C
N
374
N
O
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
N
N
388
S
C
N
389
N
C
N
390
N
O
N
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
C
N
398
N
O
N
399
N
O
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
N
N
412
S
C
N
413
N
C
N
414
N
O
N
415
N
C
N
416
N
C
N
417
N
C
N
418
N
O
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
Y
149
N
sing
Y
150
N
doub
Y
151
N
doub
N
152
N
sing
Y
153
N
sing
N
154
N
sing
Y
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
Y
257
N
doub
Y
258
N
sing
Y
259
N
sing
N
260
N
sing
Y
261
N
doub
N
262
N
sing
Y
263
N
doub
N
264
N
sing
Y
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
Y
298
N
doub
Y
299
N
sing
Y
300
N
sing
N
301
N
sing
Y
302
N
doub
N
303
N
sing
Y
304
N
doub
N
305
N
sing
Y
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
doub
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
Y
355
N
doub
Y
356
N
sing
Y
357
N
sing
N
358
N
sing
Y
359
N
doub
Y
360
N
sing
Y
361
N
sing
N
362
N
sing
Y
363
N
sing
Y
364
N
doub
N
365
N
sing
Y
366
N
doub
N
367
N
sing
Y
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
doub
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
Y
383
N
doub
Y
384
N
sing
Y
385
N
sing
N
386
N
sing
Y
387
N
doub
N
388
N
sing
Y
389
N
doub
N
390
N
sing
Y
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
doub
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
136
352
10.1016/J.CELL.2008.11.038
19167335
Large-Scale Structural Analysis of the Classical Human Protein Tyrosine Phosphatome.
2009
10.2210/pdb2cjz/pdb
pdb_00002cjz
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
MIRRORS
CCD
2006-03-24
MARRESEARCH
MIRRORS
SINGLE WAVELENGTH
M
x-ray
1
0.95
1.0
X10SA
SLS
0.95
SYNCHROTRON
SLS BEAMLINE X10SA
35188.777
HUMAN PROTEIN TYROSINE PHOSPHATASE PTPN5
3.1.3.48
PHOSPHATASE DOMAIN, RESIDUES 258-539
YES
1
man
polymer
261.168
O-PHOSPHOTYROSINE
1
syn
non-polymer
62.068
1,2-ETHANEDIOL
1
syn
non-polymer
18.015
water
212
nat
water
PROTEIN-TYROSINE PHOSPHATASE STRIATUM-ENRICHED, STEP, NEURAL- SPECIFIC PROTEIN-TYROSINE PHOSPHATASE
no
no
MHHHHHHSSGVDLGTENLYFQSMSRVLQAEELHEKALDPFLLQAEFFEIPMNFVDPKEYDIPGLVRKNRYKTILPNPHSR
VCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFWRMVWQEHTPIIVMITNIEEMNEKCTEYWPEEQVA
YDGVEITVQKVIHTEDYRLRLISLKSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAPIIVHSSA
GIGRTGCFIATSICCQQLRQEGVVDILKTTCQLRQDRGGMIQTCEQYQFVHHVMSLYEKQLSHQS
MHHHHHHSSGVDLGTENLYFQSMSRVLQAEELHEKALDPFLLQAEFFEIPMNFVDPKEYDIPGLVRKNRYKTILPNPHSR
VCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFWRMVWQEHTPIIVMITNIEEMNEKCTEYWPEEQVA
YDGVEITVQKVIHTEDYRLRLISLKSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAPIIVHSSA
GIGRTGCFIATSICCQQLRQEGVVDILKTTCQLRQDRGGMIQTCEQYQFVHHVMSLYEKQLSHQS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
sample
9606
HOMO SAPIENS
469008
ESCHERICHIA COLI
BL21(DE3)
T7
PLIC SGC
1
2.4
48
VAPOR DIFFUSION, SITTING DROP
150 NL SITTING DROPS, 0.1 M CACL2, 0.1 M TRIS PH 8, 20% PEG 6K, 10% ETHYLENE GLYCOL
audit_author
exptl_crystal_grow
pdbx_database_status
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_site
repository
Initial release
Advisory
Version format compliance
Other
Structure summary
Data collection
Experimental preparation
Data collection
Database references
Other
Data collection
Database references
Derived calculations
Refinement description
1
0
2006-05-16
1
1
2011-07-13
1
2
2012-06-20
1
3
2018-01-24
1
4
2019-05-08
1
5
2019-10-23
1
6
2023-12-13
_audit_author.name
_exptl_crystal_grow.method
_pdbx_database_status.status_code_sf
_struct_ref_seq_dif.details
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
CRYSTAL STRUCTURE OF THE HUMAN PROTEIN TYROSINE PHOSPHATASE PTPN5 (STEP, STRIATUM ENRICHED ENRICHED PHOSPHATASE)
CRYSTAL STRUCTURE OF THE HUMAN PROTEIN TYROSINE PHOSPHATASE PTPN5 AT 1.8A RESOLUTION
PDBE
Y
PDBE
2006-04-10
REL
REL
1
A
O
HOH
2133
6.59
1
A
O
HOH
2148
5.83
PTR
O-PHOSPHOTYROSINE
EDO
1,2-ETHANEDIOL
HOH
water
ENGINEERED RESIDUE IN CHAIN A, CYS 472 TO SER
RESIDUES ASP 289, LEU 298, VAL 299 AND THR 517 ARE GIVEN AS
VARIANTS IN THE UNIPROT ENTRY P54829 AND REFERNCED IN
PUBMED ID: 14702039. RESIDUES -23 TO -1 FORM PART OF A
N-TERMINAL HIS-TAG USED FOR EXPRESSION
2BIJ
PDB ENTRY 2BIJ
PDB
experimental model
PTR
1537
2
PTR
PTR
1537
A
EDO
1538
3
EDO
EDO
1538
A
HOH
2001
4
HOH
HOH
2001
A
HOH
2002
4
HOH
HOH
2002
A
HOH
2003
4
HOH
HOH
2003
A
HOH
2004
4
HOH
HOH
2004
A
HOH
2005
4
HOH
HOH
2005
A
HOH
2006
4
HOH
HOH
2006
A
HOH
2007
4
HOH
HOH
2007
A
HOH
2008
4
HOH
HOH
2008
A
HOH
2009
4
HOH
HOH
2009
A
HOH
2010
4
HOH
HOH
2010
A
HOH
2011
4
HOH
HOH
2011
A
HOH
2012
4
HOH
HOH
2012
A
HOH
2013
4
HOH
HOH
2013
A
HOH
2014
4
HOH
HOH
2014
A
HOH
2015
4
HOH
HOH
2015
A
HOH
2016
4
HOH
HOH
2016
A
HOH
2017
4
HOH
HOH
2017
A
HOH
2018
4
HOH
HOH
2018
A
HOH
2019
4
HOH
HOH
2019
A
HOH
2020
4
HOH
HOH
2020
A
HOH
2021
4
HOH
HOH
2021
A
HOH
2022
4
HOH
HOH
2022
A
HOH
2023
4
HOH
HOH
2023
A
HOH
2024
4
HOH
HOH
2024
A
HOH
2025
4
HOH
HOH
2025
A
HOH
2026
4
HOH
HOH
2026
A
HOH
2027
4
HOH
HOH
2027
A
HOH
2028
4
HOH
HOH
2028
A
HOH
2029
4
HOH
HOH
2029
A
HOH
2030
4
HOH
HOH
2030
A
HOH
2031
4
HOH
HOH
2031
A
HOH
2032
4
HOH
HOH
2032
A
HOH
2033
4
HOH
HOH
2033
A
HOH
2034
4
HOH
HOH
2034
A
HOH
2035
4
HOH
HOH
2035
A
HOH
2036
4
HOH
HOH
2036
A
HOH
2037
4
HOH
HOH
2037
A
HOH
2038
4
HOH
HOH
2038
A
HOH
2039
4
HOH
HOH
2039
A
HOH
2040
4
HOH
HOH
2040
A
HOH
2041
4
HOH
HOH
2041
A
HOH
2042
4
HOH
HOH
2042
A
HOH
2043
4
HOH
HOH
2043
A
HOH
2044
4
HOH
HOH
2044
A
HOH
2045
4
HOH
HOH
2045
A
HOH
2046
4
HOH
HOH
2046
A
HOH
2047
4
HOH
HOH
2047
A
HOH
2048
4
HOH
HOH
2048
A
HOH
2049
4
HOH
HOH
2049
A
HOH
2050
4
HOH
HOH
2050
A
HOH
2052
4
HOH
HOH
2052
A
HOH
2053
4
HOH
HOH
2053
A
HOH
2054
4
HOH
HOH
2054
A
HOH
2055
4
HOH
HOH
2055
A
HOH
2056
4
HOH
HOH
2056
A
HOH
2057
4
HOH
HOH
2057
A
HOH
2058
4
HOH
HOH
2058
A
HOH
2059
4
HOH
HOH
2059
A
HOH
2060
4
HOH
HOH
2060
A
HOH
2061
4
HOH
HOH
2061
A
HOH
2062
4
HOH
HOH
2062
A
HOH
2063
4
HOH
HOH
2063
A
HOH
2064
4
HOH
HOH
2064
A
HOH
2065
4
HOH
HOH
2065
A
HOH
2066
4
HOH
HOH
2066
A
HOH
2067
4
HOH
HOH
2067
A
HOH
2068
4
HOH
HOH
2068
A
HOH
2069
4
HOH
HOH
2069
A
HOH
2070
4
HOH
HOH
2070
A
HOH
2071
4
HOH
HOH
2071
A
HOH
2072
4
HOH
HOH
2072
A
HOH
2073
4
HOH
HOH
2073
A
HOH
2074
4
HOH
HOH
2074
A
HOH
2075
4
HOH
HOH
2075
A
HOH
2076
4
HOH
HOH
2076
A
HOH
2077
4
HOH
HOH
2077
A
HOH
2078
4
HOH
HOH
2078
A
HOH
2079
4
HOH
HOH
2079
A
HOH
2080
4
HOH
HOH
2080
A
HOH
2081
4
HOH
HOH
2081
A
HOH
2082
4
HOH
HOH
2082
A
HOH
2083
4
HOH
HOH
2083
A
HOH
2084
4
HOH
HOH
2084
A
HOH
2085
4
HOH
HOH
2085
A
HOH
2086
4
HOH
HOH
2086
A
HOH
2087
4
HOH
HOH
2087
A
HOH
2088
4
HOH
HOH
2088
A
HOH
2089
4
HOH
HOH
2089
A
HOH
2090
4
HOH
HOH
2090
A
HOH
2091
4
HOH
HOH
2091
A
HOH
2092
4
HOH
HOH
2092
A
HOH
2093
4
HOH
HOH
2093
A
HOH
2094
4
HOH
HOH
2094
A
HOH
2095
4
HOH
HOH
2095
A
HOH
2096
4
HOH
HOH
2096
A
HOH
2097
4
HOH
HOH
2097
A
HOH
2098
4
HOH
HOH
2098
A
HOH
2099
4
HOH
HOH
2099
A
HOH
2100
4
HOH
HOH
2100
A
HOH
2101
4
HOH
HOH
2101
A
HOH
2102
4
HOH
HOH
2102
A
HOH
2103
4
HOH
HOH
2103
A
HOH
2104
4
HOH
HOH
2104
A
HOH
2105
4
HOH
HOH
2105
A
HOH
2106
4
HOH
HOH
2106
A
HOH
2107
4
HOH
HOH
2107
A
HOH
2108
4
HOH
HOH
2108
A
HOH
2109
4
HOH
HOH
2109
A
HOH
2110
4
HOH
HOH
2110
A
HOH
2111
4
HOH
HOH
2111
A
HOH
2112
4
HOH
HOH
2112
A
HOH
2113
4
HOH
HOH
2113
A
HOH
2114
4
HOH
HOH
2114
A
HOH
2115
4
HOH
HOH
2115
A
HOH
2116
4
HOH
HOH
2116
A
HOH
2117
4
HOH
HOH
2117
A
HOH
2118
4
HOH
HOH
2118
A
HOH
2119
4
HOH
HOH
2119
A
HOH
2120
4
HOH
HOH
2120
A
HOH
2121
4
HOH
HOH
2121
A
HOH
2122
4
HOH
HOH
2122
A
HOH
2123
4
HOH
HOH
2123
A
HOH
2124
4
HOH
HOH
2124
A
HOH
2125
4
HOH
HOH
2125
A
HOH
2126
4
HOH
HOH
2126
A
HOH
2127
4
HOH
HOH
2127
A
HOH
2128
4
HOH
HOH
2128
A
HOH
2129
4
HOH
HOH
2129
A
HOH
2130
4
HOH
HOH
2130
A
HOH
2131
4
HOH
HOH
2131
A
HOH
2132
4
HOH
HOH
2132
A
HOH
2133
4
HOH
HOH
2133
A
HOH
2134
4
HOH
HOH
2134
A
HOH
2135
4
HOH
HOH
2135
A
HOH
2136
4
HOH
HOH
2136
A
HOH
2137
4
HOH
HOH
2137
A
HOH
2138
4
HOH
HOH
2138
A
HOH
2139
4
HOH
HOH
2139
A
HOH
2140
4
HOH
HOH
2140
A
HOH
2141
4
HOH
HOH
2141
A
HOH
2142
4
HOH
HOH
2142
A
HOH
2143
4
HOH
HOH
2143
A
HOH
2144
4
HOH
HOH
2144
A
HOH
2145
4
HOH
HOH
2145
A
HOH
2146
4
HOH
HOH
2146
A
HOH
2147
4
HOH
HOH
2147
A
HOH
2148
4
HOH
HOH
2148
A
HOH
2149
4
HOH
HOH
2149
A
HOH
2150
4
HOH
HOH
2150
A
HOH
2151
4
HOH
HOH
2151
A
HOH
2152
4
HOH
HOH
2152
A
HOH
2153
4
HOH
HOH
2153
A
HOH
2154
4
HOH
HOH
2154
A
HOH
2155
4
HOH
HOH
2155
A
HOH
2156
4
HOH
HOH
2156
A
HOH
2157
4
HOH
HOH
2157
A
HOH
2158
4
HOH
HOH
2158
A
HOH
2159
4
HOH
HOH
2159
A
HOH
2160
4
HOH
HOH
2160
A
HOH
2161
4
HOH
HOH
2161
A
HOH
2162
4
HOH
HOH
2162
A
HOH
2163
4
HOH
HOH
2163
A
HOH
2164
4
HOH
HOH
2164
A
HOH
2165
4
HOH
HOH
2165
A
HOH
2166
4
HOH
HOH
2166
A
HOH
2167
4
HOH
HOH
2167
A
HOH
2168
4
HOH
HOH
2168
A
HOH
2169
4
HOH
HOH
2169
A
HOH
2170
4
HOH
HOH
2170
A
HOH
2171
4
HOH
HOH
2171
A
HOH
2172
4
HOH
HOH
2172
A
HOH
2173
4
HOH
HOH
2173
A
HOH
2174
4
HOH
HOH
2174
A
HOH
2175
4
HOH
HOH
2175
A
HOH
2176
4
HOH
HOH
2176
A
HOH
2177
4
HOH
HOH
2177
A
HOH
2178
4
HOH
HOH
2178
A
HOH
2179
4
HOH
HOH
2179
A
HOH
2180
4
HOH
HOH
2180
A
HOH
2181
4
HOH
HOH
2181
A
HOH
2182
4
HOH
HOH
2182
A
HOH
2183
4
HOH
HOH
2183
A
HOH
2184
4
HOH
HOH
2184
A
HOH
2185
4
HOH
HOH
2185
A
HOH
2186
4
HOH
HOH
2186
A
HOH
2187
4
HOH
HOH
2187
A
HOH
2188
4
HOH
HOH
2188
A
HOH
2189
4
HOH
HOH
2189
A
HOH
2190
4
HOH
HOH
2190
A
HOH
2191
4
HOH
HOH
2191
A
HOH
2192
4
HOH
HOH
2192
A
HOH
2193
4
HOH
HOH
2193
A
HOH
2194
4
HOH
HOH
2194
A
HOH
2195
4
HOH
HOH
2195
A
HOH
2196
4
HOH
HOH
2196
A
HOH
2197
4
HOH
HOH
2197
A
HOH
2198
4
HOH
HOH
2198
A
HOH
2199
4
HOH
HOH
2199
A
HOH
2200
4
HOH
HOH
2200
A
HOH
2201
4
HOH
HOH
2201
A
HOH
2202
4
HOH
HOH
2202
A
HOH
2203
4
HOH
HOH
2203
A
HOH
2204
4
HOH
HOH
2204
A
HOH
2205
4
HOH
HOH
2205
A
HOH
2206
4
HOH
HOH
2206
A
HOH
2207
4
HOH
HOH
2207
A
HOH
2208
4
HOH
HOH
2208
A
HOH
2209
4
HOH
HOH
2209
A
HOH
2210
4
HOH
HOH
2210
A
HOH
2211
4
HOH
HOH
2211
A
HOH
2212
4
HOH
HOH
2212
A
HOH
2213
4
HOH
HOH
2213
A
n
1
-23
A
n
2
-22
A
n
3
-21
A
n
4
-20
A
n
5
-19
A
n
6
-18
A
n
7
-17
A
n
8
-16
A
n
9
-15
A
n
10
-14
A
n
11
-13
A
n
12
-12
A
n
13
-11
A
n
14
-10
A
n
15
-9
A
n
16
-8
A
ASN
-7
n
17
ASN
-7
A
LEU
-6
n
18
LEU
-6
A
TYR
-5
n
19
TYR
-5
A
PHE
-4
n
20
PHE
-4
A
GLN
-3
n
21
GLN
-3
A
SER
-2
n
22
SER
-2
A
MET
-1
n
23
MET
-1
A
SER
258
n
24
SER
258
A
ARG
259
n
25
ARG
259
A
VAL
260
n
26
VAL
260
A
LEU
261
n
27
LEU
261
A
GLN
262
n
28
GLN
262
A
ALA
263
n
29
ALA
263
A
GLU
264
n
30
GLU
264
A
GLU
265
n
31
GLU
265
A
LEU
266
n
32
LEU
266
A
HIS
267
n
33
HIS
267
A
GLU
268
n
34
GLU
268
A
LYS
269
n
35
LYS
269
A
ALA
270
n
36
ALA
270
A
LEU
271
n
37
LEU
271
A
ASP
272
n
38
ASP
272
A
PRO
273
n
39
PRO
273
A
PHE
274
n
40
PHE
274
A
LEU
275
n
41
LEU
275
A
LEU
276
n
42
LEU
276
A
GLN
277
n
43
GLN
277
A
ALA
278
n
44
ALA
278
A
GLU
279
n
45
GLU
279
A
PHE
280
n
46
PHE
280
A
PHE
281
n
47
PHE
281
A
GLU
282
n
48
GLU
282
A
ILE
283
n
49
ILE
283
A
PRO
284
n
50
PRO
284
A
MET
285
n
51
MET
285
A
ASN
286
n
52
ASN
286
A
PHE
287
n
53
PHE
287
A
VAL
288
n
54
VAL
288
A
ASP
289
n
55
ASP
289
A
PRO
290
n
56
PRO
290
A
LYS
291
n
57
LYS
291
A
GLU
292
n
58
GLU
292
A
TYR
293
n
59
TYR
293
A
ASP
294
n
60
ASP
294
A
ILE
295
n
61
ILE
295
A
PRO
296
n
62
PRO
296
A
GLY
297
n
63
GLY
297
A
LEU
298
n
64
LEU
298
A
VAL
299
n
65
VAL
299
A
ARG
300
n
66
ARG
300
A
LYS
301
n
67
LYS
301
A
ASN
302
n
68
ASN
302
A
ARG
303
n
69
ARG
303
A
TYR
304
n
70
TYR
304
A
LYS
305
n
71
LYS
305
A
THR
306
n
72
THR
306
A
ILE
307
n
73
ILE
307
A
LEU
308
n
74
LEU
308
A
PRO
309
n
75
PRO
309
A
ASN
310
n
76
ASN
310
A
PRO
311
n
77
PRO
311
A
HIS
312
n
78
HIS
312
A
SER
313
n
79
SER
313
A
ARG
314
n
80
ARG
314
A
VAL
315
n
81
VAL
315
A
CYS
316
n
82
CYS
316
A
LEU
317
n
83
LEU
317
A
THR
318
n
84
THR
318
A
SER
319
n
85
SER
319
A
PRO
320
n
86
PRO
320
A
ASP
321
n
87
ASP
321
A
PRO
322
n
88
PRO
322
A
ASP
323
n
89
ASP
323
A
ASP
324
n
90
ASP
324
A
PRO
325
n
91
PRO
325
A
LEU
326
n
92
LEU
326
A
SER
327
n
93
SER
327
A
SER
328
n
94
SER
328
A
TYR
329
n
95
TYR
329
A
ILE
330
n
96
ILE
330
A
ASN
331
n
97
ASN
331
A
ALA
332
n
98
ALA
332
A
ASN
333
n
99
ASN
333
A
TYR
334
n
100
TYR
334
A
ILE
335
n
101
ILE
335
A
ARG
336
n
102
ARG
336
A
GLY
337
n
103
GLY
337
A
TYR
338
n
104
TYR
338
A
GLY
339
n
105
GLY
339
A
GLY
340
n
106
GLY
340
A
GLU
341
n
107
GLU
341
A
GLU
342
n
108
GLU
342
A
LYS
343
n
109
LYS
343
A
VAL
344
n
110
VAL
344
A
TYR
345
n
111
TYR
345
A
ILE
346
n
112
ILE
346
A
ALA
347
n
113
ALA
347
A
THR
348
n
114
THR
348
A
GLN
349
n
115
GLN
349
A
GLY
350
n
116
GLY
350
A
PRO
351
n
117
PRO
351
A
ILE
352
n
118
ILE
352
A
VAL
353
n
119
VAL
353
A
SER
354
n
120
SER
354
A
THR
355
n
121
THR
355
A
VAL
356
n
122
VAL
356
A
ALA
357
n
123
ALA
357
A
ASP
358
n
124
ASP
358
A
PHE
359
n
125
PHE
359
A
TRP
360
n
126
TRP
360
A
ARG
361
n
127
ARG
361
A
MET
362
n
128
MET
362
A
VAL
363
n
129
VAL
363
A
TRP
364
n
130
TRP
364
A
GLN
365
n
131
GLN
365
A
GLU
366
n
132
GLU
366
A
HIS
367
n
133
HIS
367
A
THR
368
n
134
THR
368
A
PRO
369
n
135
PRO
369
A
ILE
370
n
136
ILE
370
A
ILE
371
n
137
ILE
371
A
VAL
372
n
138
VAL
372
A
MET
373
n
139
MET
373
A
ILE
374
n
140
ILE
374
A
THR
375
n
141
THR
375
A
n
142
376
A
n
143
377
A
n
144
378
A
n
145
379
A
n
146
380
A
n
147
381
A
n
148
382
A
n
149
383
A
n
150
384
A
THR
385
n
151
THR
385
A
GLU
386
n
152
GLU
386
A
TYR
387
n
153
TYR
387
A
TRP
388
n
154
TRP
388
A
PRO
389
n
155
PRO
389
A
GLU
390
n
156
GLU
390
A
GLU
391
n
157
GLU
391
A
GLN
392
n
158
GLN
392
A
VAL
393
n
159
VAL
393
A
ALA
394
n
160
ALA
394
A
TYR
395
n
161
TYR
395
A
ASP
396
n
162
ASP
396
A
GLY
397
n
163
GLY
397
A
VAL
398
n
164
VAL
398
A
GLU
399
n
165
GLU
399
A
ILE
400
n
166
ILE
400
A
THR
401
n
167
THR
401
A
VAL
402
n
168
VAL
402
A
GLN
403
n
169
GLN
403
A
LYS
404
n
170
LYS
404
A
VAL
405
n
171
VAL
405
A
ILE
406
n
172
ILE
406
A
HIS
407
n
173
HIS
407
A
THR
408
n
174
THR
408
A
GLU
409
n
175
GLU
409
A
ASP
410
n
176
ASP
410
A
TYR
411
n
177
TYR
411
A
ARG
412
n
178
ARG
412
A
LEU
413
n
179
LEU
413
A
ARG
414
n
180
ARG
414
A
LEU
415
n
181
LEU
415
A
ILE
416
n
182
ILE
416
A
SER
417
n
183
SER
417
A
LEU
418
n
184
LEU
418
A
LYS
419
n
185
LYS
419
A
SER
420
n
186
SER
420
A
n
187
421
A
n
188
422
A
GLU
423
n
189
GLU
423
A
GLU
424
n
190
GLU
424
A
ARG
425
n
191
ARG
425
A
GLY
426
n
192
GLY
426
A
LEU
427
n
193
LEU
427
A
LYS
428
n
194
LYS
428
A
HIS
429
n
195
HIS
429
A
TYR
430
n
196
TYR
430
A
TRP
431
n
197
TRP
431
A
PHE
432
n
198
PHE
432
A
THR
433
n
199
THR
433
A
SER
434
n
200
SER
434
A
TRP
435
n
201
TRP
435
A
PRO
436
n
202
PRO
436
A
ASP
437
n
203
ASP
437
A
GLN
438
n
204
GLN
438
A
LYS
439
n
205
LYS
439
A
THR
440
n
206
THR
440
A
PRO
441
n
207
PRO
441
A
ASP
442
n
208
ASP
442
A
ARG
443
n
209
ARG
443
A
ALA
444
n
210
ALA
444
A
PRO
445
n
211
PRO
445
A
PRO
446
n
212
PRO
446
A
LEU
447
n
213
LEU
447
A
LEU
448
n
214
LEU
448
A
HIS
449
n
215
HIS
449
A
LEU
450
n
216
LEU
450
A
VAL
451
n
217
VAL
451
A
ARG
452
n
218
ARG
452
A
GLU
453
n
219
GLU
453
A
VAL
454
n
220
VAL
454
A
GLU
455
n
221
GLU
455
A
GLU
456
n
222
GLU
456
A
ALA
457
n
223
ALA
457
A
ALA
458
n
224
ALA
458
A
GLN
459
n
225
GLN
459
A
GLN
460
n
226
GLN
460
A
GLU
461
n
227
GLU
461
A
GLY
462
n
228
GLY
462
A
PRO
463
n
229
PRO
463
A
HIS
464
n
230
HIS
464
A
CYS
465
n
231
CYS
465
A
ALA
466
n
232
ALA
466
A
PRO
467
n
233
PRO
467
A
ILE
468
n
234
ILE
468
A
ILE
469
n
235
ILE
469
A
VAL
470
n
236
VAL
470
A
HIS
471
n
237
HIS
471
A
SER
472
n
238
SER
472
A
SER
473
n
239
SER
473
A
ALA
474
n
240
ALA
474
A
GLY
475
n
241
GLY
475
A
ILE
476
n
242
ILE
476
A
GLY
477
n
243
GLY
477
A
ARG
478
n
244
ARG
478
A
THR
479
n
245
THR
479
A
GLY
480
n
246
GLY
480
A
CYS
481
n
247
CYS
481
A
PHE
482
n
248
PHE
482
A
ILE
483
n
249
ILE
483
A
ALA
484
n
250
ALA
484
A
THR
485
n
251
THR
485
A
SER
486
n
252
SER
486
A
ILE
487
n
253
ILE
487
A
CYS
488
n
254
CYS
488
A
CYS
489
n
255
CYS
489
A
GLN
490
n
256
GLN
490
A
GLN
491
n
257
GLN
491
A
LEU
492
n
258
LEU
492
A
ARG
493
n
259
ARG
493
A
GLN
494
n
260
GLN
494
A
GLU
495
n
261
GLU
495
A
GLY
496
n
262
GLY
496
A
VAL
497
n
263
VAL
497
A
VAL
498
n
264
VAL
498
A
ASP
499
n
265
ASP
499
A
ILE
500
n
266
ILE
500
A
LEU
501
n
267
LEU
501
A
LYS
502
n
268
LYS
502
A
THR
503
n
269
THR
503
A
THR
504
n
270
THR
504
A
CYS
505
n
271
CYS
505
A
GLN
506
n
272
GLN
506
A
LEU
507
n
273
LEU
507
A
ARG
508
n
274
ARG
508
A
GLN
509
n
275
GLN
509
A
ASP
510
n
276
ASP
510
A
ARG
511
n
277
ARG
511
A
GLY
512
n
278
GLY
512
A
GLY
513
n
279
GLY
513
A
MET
514
n
280
MET
514
A
ILE
515
n
281
ILE
515
A
GLN
516
n
282
GLN
516
A
THR
517
n
283
THR
517
A
CYS
518
n
284
CYS
518
A
GLU
519
n
285
GLU
519
A
GLN
520
n
286
GLN
520
A
TYR
521
n
287
TYR
521
A
GLN
522
n
288
GLN
522
A
PHE
523
n
289
PHE
523
A
VAL
524
n
290
VAL
524
A
HIS
525
n
291
HIS
525
A
HIS
526
n
292
HIS
526
A
VAL
527
n
293
VAL
527
A
MET
528
n
294
MET
528
A
SER
529
n
295
SER
529
A
LEU
530
n
296
LEU
530
A
TYR
531
n
297
TYR
531
A
GLU
532
n
298
GLU
532
A
LYS
533
n
299
LYS
533
A
GLN
534
n
300
GLN
534
A
LEU
535
n
301
LEU
535
A
SER
536
n
302
SER
536
A
n
303
537
A
n
304
538
A
n
305
539
A
0.2967
-0.0679
-0.3212
0.6802
0.0389
1.2861
-0.0045
0.0025
-0.0112
0.0123
0.0196
0.1004
0.0268
-0.1081
-0.0152
-0.0253
-0.0043
0.0017
-0.0525
0.0139
-0.0409
refined
15.2050
-5.4270
-16.0770
X-RAY DIFFRACTION
A
-7
A
536
X-RAY DIFFRACTION
1
author_and_software_defined_assembly
PQS
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
335
A
N
ILE
101
A
O
TYR
345
A
O
TYR
111
A
N
ILE
346
A
N
ILE
112
A
O
ILE
468
A
O
ILE
234
A
N
ILE
469
A
N
ILE
235
A
O
ILE
370
A
O
ILE
136
A
N
ILE
371
A
N
ILE
137
A
O
LYS
428
A
O
LYS
194
A
N
TRP
431
A
N
TRP
197
A
O
ARG
412
A
O
ARG
178
A
N
LYS
419
A
N
LYS
185
A
O
GLU
399
A
O
GLU
165
A
N
ILE
400
A
N
ILE
166
A
O
VAL
393
A
O
VAL
159
1
A
CG
LEU
-6
A
CG
LEU
18
1
Y
1
A
CD1
LEU
-6
A
CD1
LEU
18
1
Y
1
A
CD2
LEU
-6
A
CD2
LEU
18
1
Y
1
A
CE
LYS
291
A
CE
LYS
57
1
Y
1
A
NZ
LYS
291
A
NZ
LYS
57
1
Y
1
A
CZ
ARG
300
A
CZ
ARG
66
1
Y
1
A
NH1
ARG
300
A
NH1
ARG
66
1
Y
1
A
NH2
ARG
300
A
NH2
ARG
66
1
Y
1
A
CD
LYS
305
A
CD
LYS
71
1
Y
1
A
CE
LYS
305
A
CE
LYS
71
1
Y
1
A
NZ
LYS
305
A
NZ
LYS
71
1
Y
1
A
CD
GLU
386
A
CD
GLU
152
1
Y
1
A
OE1
GLU
386
A
OE1
GLU
152
1
Y
1
A
OE2
GLU
386
A
OE2
GLU
152
1
Y
1
A
CG
GLU
390
A
CG
GLU
156
1
Y
1
A
CD
GLU
390
A
CD
GLU
156
1
Y
1
A
OE1
GLU
390
A
OE1
GLU
156
1
Y
1
A
OE2
GLU
390
A
OE2
GLU
156
1
Y
1
A
CG
GLU
391
A
CG
GLU
157
1
Y
1
A
CD
GLU
391
A
CD
GLU
157
1
Y
1
A
OE1
GLU
391
A
OE1
GLU
157
1
Y
1
A
OE2
GLU
391
A
OE2
GLU
157
1
Y
1
A
CD
GLU
399
A
CD
GLU
165
1
Y
1
A
OE1
GLU
399
A
OE1
GLU
165
1
Y
1
A
OE2
GLU
399
A
OE2
GLU
165
1
Y
1
A
NZ
LYS
404
A
NZ
LYS
170
1
Y
1
A
CG
LYS
419
A
CG
LYS
185
1
Y
1
A
CD
LYS
419
A
CD
LYS
185
1
Y
1
A
CE
LYS
419
A
CE
LYS
185
1
Y
1
A
NZ
LYS
419
A
NZ
LYS
185
1
Y
1
A
CG
GLU
423
A
CG
GLU
189
1
Y
1
A
CD
GLU
423
A
CD
GLU
189
1
Y
1
A
OE1
GLU
423
A
OE1
GLU
189
1
Y
1
A
OE2
GLU
423
A
OE2
GLU
189
1
Y
1
A
CD
GLU
424
A
CD
GLU
190
1
Y
1
A
OE1
GLU
424
A
OE1
GLU
190
1
Y
1
A
OE2
GLU
424
A
OE2
GLU
190
1
Y
1
A
CG
ASP
437
A
CG
ASP
203
1
Y
1
A
OD1
ASP
437
A
OD1
ASP
203
1
Y
1
A
OD2
ASP
437
A
OD2
ASP
203
1
Y
1
A
OXT
PTR
1537
B
OXT
PTR
1
1
N
1
A
MET
-23
A
MET
1
1
Y
1
A
HIS
-22
A
HIS
2
1
Y
1
A
HIS
-21
A
HIS
3
1
Y
1
A
HIS
-20
A
HIS
4
1
Y
1
A
HIS
-19
A
HIS
5
1
Y
1
A
HIS
-18
A
HIS
6
1
Y
1
A
HIS
-17
A
HIS
7
1
Y
1
A
SER
-16
A
SER
8
1
Y
1
A
SER
-15
A
SER
9
1
Y
1
A
GLY
-14
A
GLY
10
1
Y
1
A
VAL
-13
A
VAL
11
1
Y
1
A
ASP
-12
A
ASP
12
1
Y
1
A
LEU
-11
A
LEU
13
1
Y
1
A
GLY
-10
A
GLY
14
1
Y
1
A
THR
-9
A
THR
15
1
Y
1
A
GLU
-8
A
GLU
16
1
Y
1
A
ASN
376
A
ASN
142
1
Y
1
A
ILE
377
A
ILE
143
1
Y
1
A
GLU
378
A
GLU
144
1
Y
1
A
GLU
379
A
GLU
145
1
Y
1
A
MET
380
A
MET
146
1
Y
1
A
ASN
381
A
ASN
147
1
Y
1
A
GLU
382
A
GLU
148
1
Y
1
A
LYS
383
A
LYS
149
1
Y
1
A
CYS
384
A
CYS
150
1
Y
1
A
GLY
421
A
GLY
187
1
Y
1
A
THR
422
A
THR
188
1
Y
1
A
HIS
537
A
HIS
303
1
Y
1
A
GLN
538
A
GLN
304
1
Y
1
A
SER
539
A
SER
305
1
Y
1
A
A
O
O
HOH
HOH
2185
2187
1.94
1
A
A
OH
O
TYR
HOH
-5
2006
1.97
1
A
A
OG
O
SER
HOH
328
2072
2.10
1
A
A
OD1
O
ASP
HOH
321
2066
2.13
1
A
ASP
321
-153.14
71.65
1
A
GLU
391
-134.07
-60.98
1
A
SER
434
-90.49
35.75
1
A
LYS
439
-94.60
53.05
1
A
ILE
476
-130.08
-44.42
1
A
ILE
515
66.18
99.72
12.38
0.68000
0.00000
0.00000
-0.26000
0.00000
-0.42000
0.955
0.939
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
0.205
0.175
0.177
1.70
101.02
1888
35803
5.000
98.5
3.529
0.060
RANDOM
LIKELY RESIDUAL
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.093
0.093
0.80
0.80
1.40
PDB ENTRY 2BIJ
MAXIMUM LIKELIHOOD
MASK
1.70
101.02
212
2426
20
0
2194
0.008
0.022
2286
0.001
0.020
1540
1.107
1.952
3116
0.825
3.000
3754
5.273
5.000
280
33.769
23.774
106
10.922
15.000
372
15.849
15.000
14
0.066
0.200
343
0.004
0.020
2521
0.001
0.020
460
0.207
0.200
426
0.188
0.200
1561
0.176
0.200
1100
0.081
0.200
1083
0.289
0.200
159
0.069
0.200
2
0.219
0.200
29
0.166
0.200
10
2.754
5.000
1437
3.653
7.000
2269
4.667
9.000
983
6.320
11.000
843
0.3060
0.2300
1.74
133
2241
20
1.700
50.390
2CJZ
37692
3.000
0.07000
1
11.9200
3.400
98.5
0.27000
1.70
1.80
3.070
1
2.31
91.6
refinement
REFMAC
5.2.0019
data reduction
MOSFLM
data scaling
SCALA
phasing
PHASER
crystal structure of the c472s mutant of human protein tyrosine phosphatase ptpn5 (step, striatum enriched phosphatase) in complex with phosphotyrosine
1
N
N
2
N
N
3
N
N
4
N
N
A
GLN
262
A
GLN
28
HELX_P
A
ALA
270
A
ALA
36
1
1
9
A
ASP
272
A
ASP
38
HELX_P
A
PHE
281
A
PHE
47
1
2
10
A
ASP
289
A
ASP
55
HELX_P
A
TYR
293
A
TYR
59
5
3
5
A
GLY
297
A
GLY
63
HELX_P
A
ASN
302
A
ASN
68
5
4
6
A
ASN
310
A
ASN
76
HELX_P
A
SER
313
A
SER
79
5
5
4
A
GLY
337
A
GLY
103
HELX_P
A
GLU
341
A
GLU
107
5
6
5
A
ILE
352
A
ILE
118
HELX_P
A
SER
354
A
SER
120
5
7
3
A
THR
355
A
THR
121
HELX_P
A
HIS
367
A
HIS
133
1
8
13
A
THR
440
A
THR
206
HELX_P
A
ASP
442
A
ASP
208
5
9
3
A
ARG
443
A
ARG
209
HELX_P
A
GLU
461
A
GLU
227
1
10
19
A
ILE
476
A
ILE
242
HELX_P
A
GLY
496
A
GLY
262
1
11
21
A
ASP
499
A
ASP
265
HELX_P
A
ARG
511
A
ARG
277
1
12
13
A
THR
517
A
THR
283
HELX_P
A
SER
536
A
SER
302
1
13
20
HYDROLASE
PROTEIN PHOSPHATASE, STEP, PTPN5, HYDROLASE, PHOSPHATASE
A
SER
319
A
SER
85
1
A
PRO
320
A
PRO
86
4.32
2CJZ
PDB
1
2CJZ
PTN5_HUMAN
UNP
1
P54829
-23
-1
2CJZ
-23
-1
2CJZ
A
1
1
23
258
539
2CJZ
258
539
P54829
A
2
24
305
1
VAL
variant
ASP
289
2CJZ
A
P54829
UNP
289
55
1
ARG
variant
LEU
298
2CJZ
A
P54829
UNP
298
64
1
CYS
variant
VAL
299
2CJZ
A
P54829
UNP
299
65
1
CYS
engineered mutation
SER
472
2CJZ
A
P54829
UNP
472
238
1
HIS
variant
THR
517
2CJZ
A
P54829
UNP
517
283
8
anti-parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
ALA
332
A
ALA
98
A
ILE
335
A
ILE
101
A
TYR
345
A
TYR
111
A
GLN
349
A
GLN
115
A
ILE
468
A
ILE
234
A
SER
472
A
SER
238
A
ILE
370
A
ILE
136
A
ILE
374
A
ILE
140
A
GLU
424
A
GLU
190
A
PHE
432
A
PHE
198
A
TYR
411
A
TYR
177
A
LYS
419
A
LYS
185
A
VAL
398
A
VAL
164
A
HIS
407
A
HIS
173
A
GLN
392
A
GLN
158
A
TYR
395
A
TYR
161
BINDING SITE FOR RESIDUE PTR A 1537
A
PTR
1537
Software
10
BINDING SITE FOR RESIDUE EDO A 1538
A
EDO
1538
Software
6
A
TYR
304
A
TYR
70
10
1_555
A
ILE
307
A
ILE
73
10
1_555
A
SER
472
A
SER
238
10
1_555
A
SER
473
A
SER
239
10
1_555
A
ALA
474
A
ALA
240
10
1_555
A
GLY
475
A
GLY
241
10
1_555
A
ILE
476
A
ILE
242
10
1_555
A
GLY
477
A
GLY
243
10
1_555
A
ARG
478
A
ARG
244
10
1_555
A
HOH
2213
D
HOH
10
1_555
A
PHE
280
A
PHE
46
6
1_555
A
PHE
281
A
PHE
47
6
1_555
A
ILE
283
A
ILE
49
6
1_555
A
MET
285
A
MET
51
6
1_555
A
ARG
508
A
ARG
274
6
1_555
A
HOH
2194
D
HOH
6
3_644
19
P 21 21 21