1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Abe, T.
Hirota, H.
Saito, K.
Koshiba, S.
Kigawa, T.
Yokoyama, S.
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Solution structure of RSGI RUH-039, a fragment of C-terminal domain of RuvB-like 2 from human cDNA
10.2210/pdb2cqa/pdb
pdb_00002cqa
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
9976.226
RuvB-like 2
3.6.1.-
C-terminal domain (Residues 132-213)
1
man
polymer
48-kDa TATA box-binding protein-interacting protein, 48-kDa TBP-interacting protein, TIP49b, Repressing pontin 52, Reptin 52, 51 kDa erythrocyte cytosolic protein, ECP-51, TIP60-associated protein 54-beta, TAP54-beta, CGI-46
no
no
GSSGSSGKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISK
LGRSFTRARSGPSSG
GSSGSSGKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISK
LGRSFTRARSGPSSG
A
hss001000001.1
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
sample
Cell-free protein synthesis
RUVBL2, TIP48, TIP49B
9606
Homo sapiens
PLASMID
P041004-05
RIKEN Structural Genomics/Proteomics Initiative
RSGI
NPPSFA, National Project on Protein Structural and Functional Analyses
database_2
pdbx_nmr_software
pdbx_nmr_spectrometer
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2005-11-19
1
1
2008-04-30
1
2
2011-07-13
1
3
2022-03-09
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
_struct_ref_seq_dif.details
SHEET
DETERMINATION METHOD: AUTHOR DETERMINED
Y
PDBJ
Y
PDBJ
2005-05-19
REL
REL
target function, structures with the lowest energy, structures with the least restraint violations
100
20
3D_15N-separated_NOESY
3D_13C-separated_NOESY
120mM
7.0
ambient
298
K
torsion angle dynamics
1
lowest energy and target function
1.3mM RSGI RUH-039 U-15,13C; 20mM d-Tris-HCl; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O
90% D2O, 10% D2O
Bruker
collection
XwinNMR
3.5
Delaglio, F.
processing
NMRPipe
20031121
Johnson, B. A.
data analysis
NMRView
5.0.4
Kobayashi, N.
data analysis
KUJIRA
0.9295
Guntert, P.
refinement
CYANA
2.0.17
800
Bruker
AVANCE
GLY
1
n
1
GLY
1
A
SER
2
n
2
SER
2
A
SER
3
n
3
SER
3
A
GLY
4
n
4
GLY
4
A
SER
5
n
5
SER
5
A
SER
6
n
6
SER
6
A
GLY
7
n
7
GLY
7
A
LYS
8
n
8
LYS
8
A
GLU
9
n
9
GLU
9
A
GLU
10
n
10
GLU
10
A
THR
11
n
11
THR
11
A
GLU
12
n
12
GLU
12
A
ILE
13
n
13
ILE
13
A
ILE
14
n
14
ILE
14
A
GLU
15
n
15
GLU
15
A
GLY
16
n
16
GLY
16
A
GLU
17
n
17
GLU
17
A
VAL
18
n
18
VAL
18
A
VAL
19
n
19
VAL
19
A
GLU
20
n
20
GLU
20
A
ILE
21
n
21
ILE
21
A
GLN
22
n
22
GLN
22
A
ILE
23
n
23
ILE
23
A
ASP
24
n
24
ASP
24
A
ARG
25
n
25
ARG
25
A
PRO
26
n
26
PRO
26
A
ALA
27
n
27
ALA
27
A
THR
28
n
28
THR
28
A
GLY
29
n
29
GLY
29
A
THR
30
n
30
THR
30
A
GLY
31
n
31
GLY
31
A
SER
32
n
32
SER
32
A
LYS
33
n
33
LYS
33
A
VAL
34
n
34
VAL
34
A
GLY
35
n
35
GLY
35
A
LYS
36
n
36
LYS
36
A
LEU
37
n
37
LEU
37
A
THR
38
n
38
THR
38
A
LEU
39
n
39
LEU
39
A
LYS
40
n
40
LYS
40
A
THR
41
n
41
THR
41
A
THR
42
n
42
THR
42
A
GLU
43
n
43
GLU
43
A
MET
44
n
44
MET
44
A
GLU
45
n
45
GLU
45
A
THR
46
n
46
THR
46
A
ILE
47
n
47
ILE
47
A
TYR
48
n
48
TYR
48
A
ASP
49
n
49
ASP
49
A
LEU
50
n
50
LEU
50
A
GLY
51
n
51
GLY
51
A
THR
52
n
52
THR
52
A
LYS
53
n
53
LYS
53
A
MET
54
n
54
MET
54
A
ILE
55
n
55
ILE
55
A
GLU
56
n
56
GLU
56
A
SER
57
n
57
SER
57
A
LEU
58
n
58
LEU
58
A
THR
59
n
59
THR
59
A
LYS
60
n
60
LYS
60
A
ASP
61
n
61
ASP
61
A
LYS
62
n
62
LYS
62
A
VAL
63
n
63
VAL
63
A
GLN
64
n
64
GLN
64
A
ALA
65
n
65
ALA
65
A
GLY
66
n
66
GLY
66
A
ASP
67
n
67
ASP
67
A
VAL
68
n
68
VAL
68
A
ILE
69
n
69
ILE
69
A
THR
70
n
70
THR
70
A
ILE
71
n
71
ILE
71
A
ASP
72
n
72
ASP
72
A
LYS
73
n
73
LYS
73
A
ALA
74
n
74
ALA
74
A
THR
75
n
75
THR
75
A
GLY
76
n
76
GLY
76
A
LYS
77
n
77
LYS
77
A
ILE
78
n
78
ILE
78
A
SER
79
n
79
SER
79
A
LYS
80
n
80
LYS
80
A
LEU
81
n
81
LEU
81
A
GLY
82
n
82
GLY
82
A
ARG
83
n
83
ARG
83
A
SER
84
n
84
SER
84
A
PHE
85
n
85
PHE
85
A
THR
86
n
86
THR
86
A
ARG
87
n
87
ARG
87
A
ALA
88
n
88
ALA
88
A
ARG
89
n
89
ARG
89
A
SER
90
n
90
SER
90
A
GLY
91
n
91
GLY
91
A
PRO
92
n
92
PRO
92
A
SER
93
n
93
SER
93
A
SER
94
n
94
SER
94
A
GLY
95
n
95
GLY
95
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
TYR
48
A
O
TYR
48
A
N
LEU
37
A
N
LEU
37
A
O
LYS
36
A
O
LYS
36
A
N
GLN
22
A
N
GLN
22
A
N
GLY
16
A
N
GLY
16
A
O
ILE
69
A
O
ILE
69
A
N
ASP
72
A
N
ASP
72
A
O
LYS
77
A
O
LYS
77
1
A
GLU
9
-87.60
35.43
1
A
GLU
12
-91.57
35.46
1
A
VAL
18
-41.44
98.19
1
A
GLU
43
48.17
25.01
2
A
GLU
12
-87.79
34.90
2
A
GLU
43
48.10
25.03
2
A
THR
52
-121.66
-50.05
3
A
GLU
10
-170.74
142.39
3
A
ALA
27
-45.82
168.33
3
A
THR
28
-34.67
107.25
3
A
GLU
43
47.36
25.76
3
A
SER
84
-174.81
145.32
3
A
SER
94
-58.28
87.70
4
A
GLU
10
-174.02
135.61
4
A
VAL
18
-43.04
106.89
4
A
GLU
43
48.15
25.29
5
A
SER
3
-53.02
176.89
5
A
LYS
8
-57.26
81.00
5
A
GLU
12
-87.29
33.67
5
A
VAL
18
-52.74
108.95
5
A
PRO
26
-69.69
2.33
5
A
THR
30
-34.30
-74.41
5
A
LYS
33
-174.03
136.45
5
A
THR
42
-37.62
116.03
5
A
GLU
43
31.79
41.22
5
A
LYS
62
38.03
47.90
5
A
PRO
92
-69.75
88.61
5
A
SER
94
-55.45
91.74
6
A
GLU
9
-168.88
114.61
6
A
GLU
10
-59.88
101.25
6
A
GLU
12
-86.21
30.50
6
A
THR
42
-37.81
111.34
6
A
GLU
43
34.45
42.07
7
A
SER
2
-39.26
107.82
7
A
GLU
12
-86.65
35.93
7
A
VAL
18
-46.59
108.14
7
A
GLU
43
-113.91
-76.91
7
A
LYS
62
36.59
51.46
7
A
ALA
88
-170.20
119.54
7
A
PRO
92
-69.75
99.50
7
A
SER
94
-42.69
106.23
8
A
SER
6
-35.47
145.81
8
A
GLU
9
35.26
45.88
8
A
GLU
10
-109.43
46.66
8
A
THR
11
37.90
43.00
8
A
GLU
12
-83.86
35.25
8
A
THR
42
-33.31
109.25
8
A
GLU
43
35.66
48.04
8
A
GLU
56
-39.73
-27.07
8
A
SER
93
-43.26
-72.31
9
A
LYS
8
42.14
25.47
9
A
THR
11
-38.33
129.22
9
A
GLU
12
-82.34
43.18
9
A
VAL
18
-36.91
106.94
9
A
THR
30
-36.39
120.39
9
A
SER
32
-49.53
153.91
9
A
LYS
62
38.02
39.96
9
A
VAL
63
-38.40
127.43
9
A
ARG
83
-34.71
149.34
10
A
GLU
12
-95.57
39.65
10
A
VAL
18
-42.30
107.27
10
A
SER
32
-46.65
164.90
10
A
GLU
56
-39.68
-29.13
10
A
ARG
83
-37.84
118.62
10
A
PRO
92
-69.80
87.53
11
A
GLU
9
-109.38
44.15
11
A
VAL
18
-39.34
105.08
11
A
GLU
43
45.92
25.31
11
A
ARG
89
-37.44
135.62
12
A
SER
2
-107.13
43.29
12
A
THR
42
-38.71
114.09
12
A
GLU
43
33.42
40.32
12
A
ARG
83
-39.09
119.24
12
A
ARG
87
-43.18
157.94
12
A
PRO
92
-69.82
95.96
12
A
SER
94
-53.21
108.35
13
A
SER
2
37.59
42.32
13
A
ALA
27
-130.80
-58.87
13
A
THR
42
-38.70
113.93
13
A
GLU
43
33.90
40.92
14
A
GLU
10
34.57
55.03
14
A
GLU
12
-92.89
33.49
14
A
ALA
27
-124.26
-61.46
14
A
THR
42
-34.62
108.63
14
A
GLU
43
37.93
46.98
14
A
ARG
83
-41.80
151.27
14
A
PRO
92
-69.76
83.81
14
A
SER
94
39.89
53.88
15
A
VAL
18
-40.93
103.68
15
A
ALA
27
-98.05
40.99
15
A
THR
28
38.89
37.44
15
A
GLU
43
46.29
26.11
15
A
ARG
83
-35.41
-32.16
15
A
SER
84
-171.58
140.57
16
A
SER
6
-173.96
115.38
16
A
LYS
8
-45.50
106.43
16
A
VAL
18
-57.53
107.85
16
A
PRO
26
-69.78
91.24
16
A
THR
28
-98.66
37.94
16
A
THR
42
-33.56
108.30
16
A
GLU
43
33.42
46.24
17
A
GLU
9
-109.91
74.77
17
A
VAL
18
-36.92
102.71
17
A
PRO
26
-69.81
99.08
17
A
LYS
62
32.33
51.55
18
A
ARG
25
-48.89
152.15
18
A
PRO
26
-69.74
-174.54
18
A
SER
32
-52.36
179.01
18
A
THR
42
-34.32
111.85
18
A
GLU
43
33.04
46.04
18
A
ARG
83
-38.45
144.45
18
A
SER
84
-42.84
99.66
18
A
PHE
85
-40.96
156.00
18
A
PRO
92
-69.77
-176.69
18
A
SER
94
-58.79
102.93
19
A
SER
5
-170.43
146.78
19
A
SER
6
-50.81
177.98
19
A
GLU
9
-106.91
79.19
19
A
GLU
12
-95.20
37.23
19
A
ALA
27
-54.26
176.20
19
A
THR
28
-56.39
104.51
19
A
THR
42
-39.79
111.37
19
A
GLU
43
36.20
39.78
19
A
THR
52
-100.64
-68.45
19
A
LEU
81
-124.03
-52.68
19
A
SER
84
-172.48
147.95
19
A
SER
90
-99.84
40.22
20
A
SER
5
-67.38
78.89
20
A
GLU
12
-86.37
37.74
20
A
PRO
26
-69.78
0.92
20
A
SER
32
-45.49
165.56
20
A
THR
42
-45.67
-18.72
20
A
GLU
43
-114.16
-77.28
20
A
LYS
62
35.11
45.51
20
A
THR
86
-48.51
157.38
Solution structure of RSGI RUH-039, a fragment of C-terminal domain of RuvB-like 2 from human cDNA
1
N
N
A
THR
52
A
THR
52
HELX_P
A
ASP
61
A
ASP
61
1
1
10
HYDROLASE
RuvB like 2, TIP48, TIP49b, Reptin 52, ECP-51, TAP54-beta, structural genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, Hydrolase
RUVB2_HUMAN
UNP
1
131
Q9Y230
KEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTR
AR
131
212
2CQA
8
89
Q9Y230
A
1
8
89
1
cloning artifact
GLY
1
2CQA
A
Q9Y230
UNP
1
1
cloning artifact
SER
2
2CQA
A
Q9Y230
UNP
2
1
cloning artifact
SER
3
2CQA
A
Q9Y230
UNP
3
1
cloning artifact
GLY
4
2CQA
A
Q9Y230
UNP
4
1
cloning artifact
SER
5
2CQA
A
Q9Y230
UNP
5
1
cloning artifact
SER
6
2CQA
A
Q9Y230
UNP
6
1
cloning artifact
GLY
7
2CQA
A
Q9Y230
UNP
7
1
cloning artifact
SER
90
2CQA
A
Q9Y230
UNP
90
1
cloning artifact
GLY
91
2CQA
A
Q9Y230
UNP
91
1
cloning artifact
PRO
92
2CQA
A
Q9Y230
UNP
92
1
cloning artifact
SER
93
2CQA
A
Q9Y230
UNP
93
1
cloning artifact
SER
94
2CQA
A
Q9Y230
UNP
94
1
cloning artifact
GLY
95
2CQA
A
Q9Y230
UNP
95
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
MET
44
A
MET
44
A
LEU
50
A
LEU
50
A
VAL
34
A
VAL
34
A
THR
41
A
THR
41
A
ILE
13
A
ILE
13
A
ASP
24
A
ASP
24
A
VAL
68
A
VAL
68
A
ASP
72
A
ASP
72
A
LYS
77
A
LYS
77
A
GLY
82
A
GLY
82