1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Suzuki, S. Muto, Y. Inoue, M. Kigawa, T. Terada, T. Shirouzu, M. Yokoyama, S. RIKEN Structural Genomics/Proteomics Initiative (RSGI) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be Published 0353 Solution structure of the S4 domain of U3 small nucleolar ribonucleoprotein protein IMP3 homolog 10.2210/pdb2cqj/pdb pdb_00002cqj 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 7533.541 U3 small nucleolar ribonucleoprotein protein IMP3 homolog S4 domain 1 man polymer BRMS2 no no GSSGSSGRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSKISGPSSG GSSGSSGRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSKISGPSSG A hss001002801.1 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo sample Cell-free protein synthesis C15orf12 9606 Homo sapiens Plasmid P041213-13 RIKEN Structural Genomics/Proteomics Initiative RSGI NPPSFA, National Project on Protein Structural and Functional Analyses database_2 pdbx_nmr_software pdbx_nmr_spectrometer pdbx_struct_assembly pdbx_struct_oper_list struct_ref_seq_dif repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2005-11-20 1 1 2008-04-30 1 2 2011-07-13 1 3 2022-03-09 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name _pdbx_nmr_spectrometer.model _struct_ref_seq_dif.details Y PDBJ Y PDBJ 2005-05-20 REL REL The structure was determined using triple-resonance NMR spectroscopy. target function 100 20 3D_15N-separated_NOESY 3D_13C-separated_NOESY 120mM 7.0 ambient 283 K torsion angle dyanamics, simulated annealing 1 lowest energy 1.1mM 13C/15N-PROTEIN; 20mM d-Tris-HCl; 100mM NaCl; 1mM d-DTT; 0.02% NaN3 90% H2O/10% D2O Bruker collection XwinNMR 3.5 Delaglio, F. processing NMRPipe 20031121 Johnson, B.A. data analysis NMRView 5.0.4 Kobayashi, N. data analysis KUJIRA 0.9295 Yokochi, M. data analysis Olivia 1.10.5 Guntert, P. structure solution CYANA 2.0.17 Guntert, P. refinement CYANA 2.0.17 700 Bruker AVANCE GLY 102 n 1 GLY 102 A SER 103 n 2 SER 103 A SER 104 n 3 SER 104 A GLY 105 n 4 GLY 105 A SER 106 n 5 SER 106 A SER 107 n 6 SER 107 A GLY 108 n 7 GLY 108 A ARG 109 n 8 ARG 109 A ARG 110 n 9 ARG 110 A LEU 111 n 10 LEU 111 A PRO 112 n 11 PRO 112 A THR 113 n 12 THR 113 A VAL 114 n 13 VAL 114 A LEU 115 n 14 LEU 115 A LEU 116 n 15 LEU 116 A LYS 117 n 16 LYS 117 A LEU 118 n 17 LEU 118 A ARG 119 n 18 ARG 119 A MET 120 n 19 MET 120 A ALA 121 n 20 ALA 121 A GLN 122 n 21 GLN 122 A HIS 123 n 22 HIS 123 A LEU 124 n 23 LEU 124 A GLN 125 n 24 GLN 125 A ALA 126 n 25 ALA 126 A ALA 127 n 26 ALA 127 A VAL 128 n 27 VAL 128 A ALA 129 n 28 ALA 129 A PHE 130 n 29 PHE 130 A VAL 131 n 30 VAL 131 A GLU 132 n 31 GLU 132 A GLN 133 n 32 GLN 133 A GLY 134 n 33 GLY 134 A HIS 135 n 34 HIS 135 A VAL 136 n 35 VAL 136 A ARG 137 n 36 ARG 137 A VAL 138 n 37 VAL 138 A GLY 139 n 38 GLY 139 A PRO 140 n 39 PRO 140 A ASP 141 n 40 ASP 141 A VAL 142 n 41 VAL 142 A VAL 143 n 42 VAL 143 A THR 144 n 43 THR 144 A ASP 145 n 44 ASP 145 A PRO 146 n 45 PRO 146 A ALA 147 n 46 ALA 147 A PHE 148 n 47 PHE 148 A LEU 149 n 48 LEU 149 A VAL 150 n 49 VAL 150 A THR 151 n 50 THR 151 A ARG 152 n 51 ARG 152 A SER 153 n 52 SER 153 A MET 154 n 53 MET 154 A GLU 155 n 54 GLU 155 A ASP 156 n 55 ASP 156 A PHE 157 n 56 PHE 157 A VAL 158 n 57 VAL 158 A THR 159 n 58 THR 159 A TRP 160 n 59 TRP 160 A VAL 161 n 60 VAL 161 A ASP 162 n 61 ASP 162 A SER 163 n 62 SER 163 A SER 164 n 63 SER 164 A LYS 165 n 64 LYS 165 A ILE 166 n 65 ILE 166 A SER 167 n 66 SER 167 A GLY 168 n 67 GLY 168 A PRO 169 n 68 PRO 169 A SER 170 n 69 SER 170 A SER 171 n 70 SER 171 A GLY 172 n 71 GLY 172 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ARG 109 A N ARG 8 A O VAL 150 A O VAL 49 A N ARG 137 A N ARG 36 A O THR 159 A O THR 58 1 A ARG 119 48.73 29.43 1 A PRO 140 -69.71 3.38 1 A PHE 157 -93.12 33.35 1 A ILE 166 -39.07 130.40 2 A GLN 122 -80.50 -70.50 2 A PRO 140 -69.74 3.42 3 A ARG 119 47.52 27.51 3 A PRO 140 -69.81 3.48 3 A PHE 157 -91.67 34.49 3 A SER 163 -108.06 47.71 3 A ILE 166 -36.07 145.20 4 A PRO 140 -69.76 3.38 4 A PHE 157 -91.78 34.48 4 A SER 163 -113.88 63.82 4 A SER 171 -39.00 137.56 5 A GLN 122 -90.52 -68.20 5 A PRO 140 -69.74 3.50 5 A ILE 166 -33.95 140.71 6 A SER 107 -104.17 44.38 6 A ARG 119 48.80 25.11 6 A GLN 122 -100.49 -74.25 6 A PRO 140 -69.76 3.70 6 A ARG 152 -34.07 -70.06 6 A PHE 157 -86.49 33.70 6 A PRO 169 -69.79 99.98 7 A GLN 122 -90.76 -66.16 7 A PRO 140 -69.83 3.47 7 A SER 164 -50.60 -74.41 7 A PRO 169 -69.81 -178.57 8 A SER 106 -65.16 93.97 8 A ARG 119 48.60 27.37 8 A GLN 122 -89.65 -70.66 8 A PRO 140 -69.84 3.58 8 A SER 171 -59.42 106.09 9 A GLN 122 -93.03 -68.22 9 A PRO 140 -69.82 3.64 9 A LYS 165 -102.21 40.83 9 A SER 170 -39.06 152.36 10 A PRO 140 -69.79 3.60 10 A PHE 157 -97.13 31.20 10 A SER 171 -125.47 -52.01 11 A GLN 122 -96.81 -67.74 11 A PRO 140 -69.69 3.39 11 A SER 170 -37.78 121.73 12 A ARG 119 45.78 29.30 12 A PRO 140 -69.74 3.55 13 A GLN 122 -62.46 -72.84 13 A PRO 140 -69.79 3.47 13 A ARG 152 -37.77 -30.78 13 A SER 163 -101.20 40.71 13 A ILE 166 -37.36 126.37 14 A ARG 119 47.95 26.99 14 A GLN 122 -92.20 -70.06 14 A PRO 140 -69.73 3.49 14 A PHE 157 -96.68 32.36 14 A SER 170 -41.39 151.54 15 A GLN 122 -92.91 -66.71 15 A PRO 140 -69.84 3.56 15 A SER 163 -109.80 66.59 15 A SER 164 -87.51 -75.15 15 A ILE 166 -33.43 112.69 16 A ARG 119 48.00 25.15 16 A PRO 140 -69.79 3.73 16 A ILE 166 -106.42 73.33 16 A PRO 169 -69.72 84.84 17 A ARG 119 48.77 25.78 17 A PRO 140 -69.72 3.67 17 A VAL 161 -37.17 -32.69 18 A ARG 119 48.84 29.48 18 A PRO 140 -69.80 3.53 18 A PHE 157 -84.59 33.19 18 A ASP 162 -121.86 -54.39 18 A PRO 169 -69.78 2.82 19 A SER 107 -127.60 -65.44 19 A ARG 119 44.95 28.64 19 A PRO 140 -69.85 3.62 19 A PHE 157 -95.01 30.81 19 A SER 163 -87.67 38.26 20 A ARG 119 49.46 26.93 20 A GLN 122 -95.12 -63.94 20 A PRO 140 -69.65 3.45 20 A SER 163 -103.70 51.42 Solution structure of the S4 domain of U3 small nucleolar ribonucleoprotein protein IMP3 homolog 1 N N A LEU 111 A LEU 10 HELX_P A LYS 117 A LYS 16 1 1 7 A LEU 124 A LEU 23 HELX_P A GLU 132 A GLU 31 1 2 9 A ARG 152 A ARG 51 HELX_P A GLU 155 A GLU 54 1 3 4 RNA BINDING PROTEIN S4 domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RNA BINDING PROTEIN IMP3_HUMAN UNP 1 109 Q9NV31 RRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSKI 109 166 2CQJ 109 166 Q9NV31 A 1 8 65 1 cloning artifact GLY 102 2CQJ A Q9NV31 UNP 1 1 cloning artifact SER 103 2CQJ A Q9NV31 UNP 2 1 cloning artifact SER 104 2CQJ A Q9NV31 UNP 3 1 cloning artifact GLY 105 2CQJ A Q9NV31 UNP 4 1 cloning artifact SER 106 2CQJ A Q9NV31 UNP 5 1 cloning artifact SER 107 2CQJ A Q9NV31 UNP 6 1 cloning artifact GLY 108 2CQJ A Q9NV31 UNP 7 1 cloning artifact SER 167 2CQJ A Q9NV31 UNP 66 1 cloning artifact GLY 168 2CQJ A Q9NV31 UNP 67 1 cloning artifact PRO 169 2CQJ A Q9NV31 UNP 68 1 cloning artifact SER 170 2CQJ A Q9NV31 UNP 69 1 cloning artifact SER 171 2CQJ A Q9NV31 UNP 70 1 cloning artifact GLY 172 2CQJ A Q9NV31 UNP 71 2 3 anti-parallel anti-parallel anti-parallel A ARG 109 A ARG 8 A ARG 110 A ARG 9 A LEU 149 A LEU 48 A THR 151 A THR 50 A ASP 141 A ASP 40 A VAL 142 A VAL 41 A VAL 136 A VAL 35 A VAL 138 A VAL 37 A VAL 158 A VAL 57 A TRP 160 A TRP 59 1 P 1