1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Suetake, T. Hayashi, F. Yokoyama, S. RIKEN Structural Genomics/Proteomics Initiative (RSGI) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be Published 0353 Solution structure of N-terminal PDZ domain from mouse TJP2 10.2210/pdb2csj/pdb pdb_00002csj 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 12373.908 Tjp2 protein N-terminal PDZ domain 1 man polymer Tight junction protein ZO-2, Zonula occludens 2 protein, Zona occludens 2 protein, Tight junction protein 2 no no GSSGSSGMEEVIWEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPADGLLQENDRVVMVNGTPMEDV LHSFAVQQLRKSGKIAAIVVKRPRKVQVAPLSGPSSG GSSGSSGMEEVIWEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPADGLLQENDRVVMVNGTPMEDV LHSFAVQQLRKSGKIAAIVVKRPRKVQVAPLSGPSSG A mmt008000522.1 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse Mus sample cell free protein synthesis RIKEN cDNA 4632401G08 10090 Mus musculus PLASMID P040727-10 RIKEN Structural Genomics/Proteomics Initiative RSGI NPPSFA, National Project on Protein Structural and Functional Analyses database_2 pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list struct_ref_seq_dif repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2005-11-21 1 1 2008-04-30 1 2 2011-07-13 1 3 2022-03-09 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name _struct_ref_seq_dif.details Y PDBJ Y PDBJ 2005-05-21 REL structures with the least restraint violation, target function 100 20 3D_13C-separated_NOESY 3D_15N-separated_NOESY 100mM NaCl 7.0 ambient 298 K torsion angle dynamics 1 lowest energy 1.20mM 13C, 15N-labeled protein; 20mM d-Tris-HCl; 100mM NaCl; 1mM d10-DTT; 0.02% NaN3 90% H2O/10% D2O VARIAN collection VNMR 6.1C Delaglio, F. processing NMRPipe 20031121 Johnson, B. A. data analysis NMRView 5.0.4 Kobayashi, N. data analysis KUJIRA 0.927 Guntert, P. structure solution CYANA 2.0.17 Guntert, P. refinement CYANA 2.0.17 800 Varian INOVA 900 Varian INOVA GLY 1 n 1 GLY 1 A SER 2 n 2 SER 2 A SER 3 n 3 SER 3 A GLY 4 n 4 GLY 4 A SER 5 n 5 SER 5 A SER 6 n 6 SER 6 A GLY 7 n 7 GLY 7 A MET 8 n 8 MET 8 A GLU 9 n 9 GLU 9 A GLU 10 n 10 GLU 10 A VAL 11 n 11 VAL 11 A ILE 12 n 12 ILE 12 A TRP 13 n 13 TRP 13 A GLU 14 n 14 GLU 14 A GLN 15 n 15 GLN 15 A TYR 16 n 16 TYR 16 A THR 17 n 17 THR 17 A VAL 18 n 18 VAL 18 A THR 19 n 19 THR 19 A LEU 20 n 20 LEU 20 A GLN 21 n 21 GLN 21 A LYS 22 n 22 LYS 22 A ASP 23 n 23 ASP 23 A SER 24 n 24 SER 24 A LYS 25 n 25 LYS 25 A ARG 26 n 26 ARG 26 A GLY 27 n 27 GLY 27 A PHE 28 n 28 PHE 28 A GLY 29 n 29 GLY 29 A ILE 30 n 30 ILE 30 A ALA 31 n 31 ALA 31 A VAL 32 n 32 VAL 32 A SER 33 n 33 SER 33 A GLY 34 n 34 GLY 34 A GLY 35 n 35 GLY 35 A ARG 36 n 36 ARG 36 A ASP 37 n 37 ASP 37 A ASN 38 n 38 ASN 38 A PRO 39 n 39 PRO 39 A HIS 40 n 40 HIS 40 A PHE 41 n 41 PHE 41 A GLU 42 n 42 GLU 42 A ASN 43 n 43 ASN 43 A GLY 44 n 44 GLY 44 A GLU 45 n 45 GLU 45 A THR 46 n 46 THR 46 A SER 47 n 47 SER 47 A ILE 48 n 48 ILE 48 A VAL 49 n 49 VAL 49 A ILE 50 n 50 ILE 50 A SER 51 n 51 SER 51 A ASP 52 n 52 ASP 52 A VAL 53 n 53 VAL 53 A LEU 54 n 54 LEU 54 A PRO 55 n 55 PRO 55 A GLY 56 n 56 GLY 56 A GLY 57 n 57 GLY 57 A PRO 58 n 58 PRO 58 A ALA 59 n 59 ALA 59 A ASP 60 n 60 ASP 60 A GLY 61 n 61 GLY 61 A LEU 62 n 62 LEU 62 A LEU 63 n 63 LEU 63 A GLN 64 n 64 GLN 64 A GLU 65 n 65 GLU 65 A ASN 66 n 66 ASN 66 A ASP 67 n 67 ASP 67 A ARG 68 n 68 ARG 68 A VAL 69 n 69 VAL 69 A VAL 70 n 70 VAL 70 A MET 71 n 71 MET 71 A VAL 72 n 72 VAL 72 A ASN 73 n 73 ASN 73 A GLY 74 n 74 GLY 74 A THR 75 n 75 THR 75 A PRO 76 n 76 PRO 76 A MET 77 n 77 MET 77 A GLU 78 n 78 GLU 78 A ASP 79 n 79 ASP 79 A VAL 80 n 80 VAL 80 A LEU 81 n 81 LEU 81 A HIS 82 n 82 HIS 82 A SER 83 n 83 SER 83 A PHE 84 n 84 PHE 84 A ALA 85 n 85 ALA 85 A VAL 86 n 86 VAL 86 A GLN 87 n 87 GLN 87 A GLN 88 n 88 GLN 88 A LEU 89 n 89 LEU 89 A ARG 90 n 90 ARG 90 A LYS 91 n 91 LYS 91 A SER 92 n 92 SER 92 A GLY 93 n 93 GLY 93 A LYS 94 n 94 LYS 94 A ILE 95 n 95 ILE 95 A ALA 96 n 96 ALA 96 A ALA 97 n 97 ALA 97 A ILE 98 n 98 ILE 98 A VAL 99 n 99 VAL 99 A VAL 100 n 100 VAL 100 A LYS 101 n 101 LYS 101 A ARG 102 n 102 ARG 102 A PRO 103 n 103 PRO 103 A ARG 104 n 104 ARG 104 A LYS 105 n 105 LYS 105 A VAL 106 n 106 VAL 106 A GLN 107 n 107 GLN 107 A VAL 108 n 108 VAL 108 A ALA 109 n 109 ALA 109 A PRO 110 n 110 PRO 110 A LEU 111 n 111 LEU 111 A SER 112 n 112 SER 112 A GLY 113 n 113 GLY 113 A PRO 114 n 114 PRO 114 A SER 115 n 115 SER 115 A SER 116 n 116 SER 116 A GLY 117 n 117 GLY 117 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N GLU 14 A N GLU 14 A O ARG 102 A O ARG 102 A O VAL 99 A O VAL 99 A N MET 71 A N MET 71 A N SER 33 A N SER 33 A O VAL 49 A O VAL 49 1 A SER 5 -46.84 98.34 1 A GLU 9 39.40 49.79 1 A LYS 22 -62.38 96.93 1 A ASP 23 -62.90 -174.65 1 A SER 24 -42.09 -76.95 1 A PRO 39 -69.76 81.89 1 A PHE 41 -33.66 100.14 1 A THR 46 -76.28 48.93 1 A LEU 54 -34.05 106.15 1 A ASP 60 -44.46 91.44 1 A ASN 66 74.17 31.78 1 A ARG 68 -37.70 96.61 1 A LYS 94 -132.85 -31.89 1 A ARG 104 -109.35 73.81 1 A LYS 105 -35.69 140.72 1 A PRO 110 -69.77 -172.21 2 A LYS 22 -69.41 87.98 2 A ASP 23 -49.71 -179.01 2 A SER 24 -40.20 -76.25 2 A PRO 39 -69.75 83.13 2 A PHE 41 -32.68 109.43 2 A THR 46 -85.11 42.66 2 A LEU 54 -35.30 105.72 2 A PRO 55 -69.76 1.00 2 A ASP 60 -45.68 90.73 2 A ARG 104 -93.51 55.19 2 A LYS 105 -34.07 140.18 2 A ALA 109 -39.33 153.69 2 A LEU 111 -102.51 76.09 3 A SER 6 -173.07 145.39 3 A LYS 22 -58.04 87.90 3 A ASP 23 -51.47 -174.65 3 A SER 24 -43.17 -77.54 3 A ARG 26 -48.69 -19.38 3 A PRO 39 -69.69 90.18 3 A PHE 41 -33.66 105.23 3 A THR 46 -92.54 46.76 3 A LEU 54 -38.93 111.05 3 A ASP 60 -53.36 93.92 3 A ARG 68 -35.71 98.47 3 A ARG 104 -103.89 78.06 4 A MET 8 -49.29 168.65 4 A LYS 22 -53.44 94.21 4 A ASP 23 -49.95 179.53 4 A SER 24 -37.64 -76.07 4 A PRO 39 -69.71 79.89 4 A PHE 41 -32.39 103.66 4 A THR 46 -81.15 49.86 4 A ASP 52 -161.13 117.50 4 A LEU 54 -33.24 108.85 4 A PRO 55 -69.69 0.59 4 A ASP 60 -48.08 89.85 4 A ASN 66 73.05 44.15 4 A ARG 68 -57.60 91.92 4 A VAL 70 -103.97 -60.76 4 A LYS 94 -132.95 -33.78 4 A ARG 104 -102.42 79.01 5 A SER 6 -131.41 -55.45 5 A ASP 23 -53.91 -175.23 5 A SER 24 -43.35 -72.54 5 A PRO 39 -69.75 79.99 5 A PHE 41 -34.53 97.07 5 A ILE 48 -39.30 141.82 5 A LEU 54 -34.50 105.77 5 A PRO 55 -69.74 4.32 5 A ASP 60 -55.53 94.30 5 A ARG 68 -42.11 93.89 5 A ARG 104 -111.85 71.07 5 A LYS 105 -38.18 150.46 6 A ASP 23 -50.18 -177.09 6 A SER 24 -42.43 -76.69 6 A PRO 39 -69.70 79.95 6 A PHE 41 -33.87 104.31 6 A THR 46 -98.85 46.05 6 A LEU 54 -34.23 106.26 6 A PRO 55 -69.75 4.22 6 A ASP 60 -42.53 91.64 6 A ARG 68 -42.01 104.12 6 A ARG 104 -105.23 77.22 6 A PRO 110 -69.79 -174.89 7 A SER 6 -96.31 -68.68 7 A LYS 22 -59.71 85.27 7 A ASP 23 -53.06 -176.04 7 A SER 24 -38.47 -77.84 7 A PRO 39 -69.84 81.55 7 A PHE 41 -28.72 96.77 7 A THR 46 -38.75 -38.41 7 A SER 47 -46.01 105.93 7 A LEU 54 -37.51 106.71 7 A PRO 55 -69.80 4.72 7 A ASP 60 -45.79 93.00 7 A ARG 68 -52.76 96.39 7 A ARG 104 -110.43 69.30 7 A LYS 105 -35.89 148.24 7 A LEU 111 -39.35 143.73 7 A SER 112 -34.52 125.81 8 A GLU 9 -50.07 174.33 8 A LYS 22 -65.92 91.17 8 A ASP 23 -56.54 174.91 8 A ARG 26 -112.64 61.03 8 A PRO 39 -69.79 81.88 8 A PHE 41 -29.74 97.56 8 A ILE 48 -55.96 107.05 8 A LEU 54 -33.33 113.09 8 A ASP 60 -52.37 88.94 8 A ASN 66 71.25 36.32 8 A ARG 68 -42.17 96.11 8 A LYS 94 -133.36 -43.13 9 A SER 5 -36.29 117.82 9 A LYS 22 -62.00 90.38 9 A ASP 23 -57.95 -176.19 9 A SER 24 -57.75 -71.53 9 A ARG 26 -114.07 51.09 9 A PRO 39 -69.75 83.28 9 A PHE 41 -33.25 101.51 9 A THR 46 -85.62 49.95 9 A ASP 60 -43.39 92.04 9 A ASN 66 72.03 35.41 9 A ARG 68 -37.84 97.65 9 A VAL 106 -58.87 90.75 9 A PRO 110 -69.74 -175.87 10 A LYS 22 -67.00 89.01 10 A ASP 23 -55.00 -174.58 10 A SER 24 -50.31 -71.81 10 A ARG 26 -85.55 39.28 10 A PRO 39 -69.77 79.68 10 A PHE 41 -35.89 98.67 10 A GLU 42 -33.63 -35.04 10 A THR 46 -84.93 46.66 10 A LEU 54 -38.76 112.60 10 A ASP 60 -48.75 89.34 10 A ASN 66 72.62 37.68 10 A ARG 68 -36.24 98.86 10 A VAL 70 -122.94 -54.32 11 A SER 5 -172.17 131.66 11 A MET 8 -58.35 174.31 11 A LYS 22 -58.02 91.54 11 A ARG 26 -85.95 49.50 11 A PRO 39 -69.73 89.34 11 A PHE 41 -31.15 104.52 11 A GLU 42 -29.60 -53.49 11 A THR 46 -100.41 49.09 11 A LEU 54 -32.13 115.06 11 A ASP 60 -49.21 90.39 11 A ARG 68 -35.94 100.92 11 A LYS 94 -130.71 -49.06 11 A ARG 104 -104.05 70.92 11 A LYS 105 -34.04 134.42 12 A LYS 22 -59.05 92.81 12 A ARG 26 -82.41 47.20 12 A PRO 39 -69.69 79.89 12 A PHE 41 -33.12 100.43 12 A LEU 54 -37.07 114.16 12 A ASP 60 -48.77 90.54 12 A ARG 68 -34.21 96.61 12 A LYS 94 -130.93 -46.41 12 A PRO 110 -69.73 -174.59 13 A SER 5 -164.91 109.02 13 A MET 8 -49.35 162.64 13 A LYS 22 -56.48 96.60 13 A ASP 23 -51.31 -175.15 13 A SER 24 -42.27 -76.27 13 A PRO 39 -69.78 84.84 13 A PHE 41 -32.60 106.21 13 A THR 46 -82.38 46.03 13 A LEU 54 -33.51 112.09 13 A ASP 60 -48.13 89.53 13 A ARG 68 -37.35 102.70 13 A ARG 104 -110.86 60.50 13 A LYS 105 -34.45 141.32 13 A VAL 106 -52.53 90.46 13 A PRO 110 -69.78 -177.29 13 A LEU 111 32.77 44.64 14 A LYS 22 -64.85 89.58 14 A ARG 26 -106.49 58.20 14 A PRO 39 -69.73 80.95 14 A PHE 41 -32.75 117.26 14 A THR 46 -101.96 50.46 14 A ILE 48 -65.38 92.86 14 A LEU 54 -33.76 106.75 14 A PRO 55 -69.73 0.16 14 A ASP 60 -46.18 89.86 14 A ARG 68 -45.18 100.83 14 A ARG 104 -109.53 73.25 14 A LYS 105 -34.15 141.60 14 A PRO 110 -69.81 -174.74 14 A PRO 114 -69.78 -168.32 15 A SER 2 -42.68 104.38 15 A ASP 23 -56.21 -175.41 15 A PRO 39 -69.79 79.91 15 A PHE 41 -31.41 100.32 15 A LEU 54 -32.31 109.83 15 A ASP 60 -48.75 92.30 15 A ASN 66 73.88 31.61 15 A ARG 68 -34.89 100.05 15 A ARG 104 -93.21 43.69 15 A LYS 105 -36.17 145.60 16 A LYS 22 -55.71 101.17 16 A ASP 23 -52.53 -177.04 16 A SER 24 -41.48 -76.63 16 A PRO 39 -69.76 82.86 16 A PHE 41 -33.93 109.67 16 A ASN 43 -62.67 -74.30 16 A THR 46 -91.61 47.69 16 A ILE 48 -34.02 102.24 16 A LEU 54 -33.50 122.09 16 A ASP 60 -80.04 42.95 16 A GLN 88 -37.47 -39.22 16 A SER 92 -37.89 138.02 16 A LYS 94 -132.91 -35.91 16 A ARG 104 -114.62 64.13 16 A LEU 111 -49.76 158.81 17 A SER 6 -34.52 150.15 17 A MET 8 -175.02 137.10 17 A LYS 22 -65.58 91.07 17 A ASP 23 -52.73 -179.99 17 A SER 24 -39.01 -76.07 17 A ARG 26 -34.24 -35.50 17 A PRO 39 -69.77 79.54 17 A GLU 42 39.87 24.91 17 A ASN 43 -134.95 -45.10 17 A THR 46 -97.64 42.81 17 A LEU 54 -35.26 109.85 17 A ASP 60 -38.50 93.85 17 A ASN 66 74.98 38.29 17 A ARG 68 -41.80 95.86 17 A ARG 104 -109.69 74.58 17 A LYS 105 -34.45 136.62 17 A ALA 109 -34.30 142.87 17 A LEU 111 -43.44 98.53 17 A SER 112 -66.25 85.90 17 A PRO 114 -69.74 1.63 17 A SER 115 -36.98 140.72 18 A SER 24 -38.59 -76.92 18 A ARG 36 -48.11 -19.98 18 A PRO 39 -69.80 80.48 18 A PHE 41 -35.20 99.64 18 A THR 46 -86.07 48.23 18 A LEU 54 -34.22 116.61 18 A PRO 55 -69.81 3.79 18 A ASP 60 -82.45 42.91 18 A ASN 66 70.94 30.52 18 A ARG 68 -32.19 94.25 18 A LYS 94 -133.78 -44.64 18 A VAL 106 -66.60 75.61 19 A SER 5 -129.65 -53.00 19 A LYS 22 -66.01 86.26 19 A SER 24 -35.63 -70.77 19 A ARG 26 -90.36 43.78 19 A PRO 39 -69.79 87.61 19 A PHE 41 -30.87 101.60 19 A SER 47 -38.99 130.57 19 A LEU 54 -38.37 114.77 19 A ASP 60 -56.48 88.59 19 A ARG 68 -52.62 86.29 19 A LYS 94 -131.49 -36.55 20 A ASP 23 -56.67 -174.69 20 A SER 24 -44.32 -76.22 20 A ARG 26 -32.69 -39.25 20 A PRO 39 -69.76 79.75 20 A PHE 41 -31.11 100.75 20 A THR 46 -76.09 47.92 20 A LEU 54 -34.96 106.83 20 A PRO 55 -69.75 4.56 20 A ASP 60 -40.17 94.61 20 A ARG 68 -37.40 100.64 20 A ASP 79 72.65 44.25 20 A LYS 94 -132.03 -41.25 20 A ARG 104 -105.96 77.10 20 A LYS 105 -38.64 137.91 Solution structure of N-terminal PDZ domain from mouse TJP2 1 N N A PRO 58 A PRO 58 HELX_P A LEU 63 A LEU 63 1 1 6 A LEU 81 A LEU 81 HELX_P A SER 92 A SER 92 1 2 12 CELL ADHESION PDZ domain, TJP2, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, CELL ADHESION ZO2_MOUSE UNP 1 1 Q9Z0U1 MEEVIWEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPADGLLQENDRVVMVNGTPMEDVLHSFAVQ QLRKSGKIAAIVVKRPRKVQVAPL 1 104 2CSJ 8 111 Q9Z0U1 A 1 8 111 1 cloning artifact GLY 1 2CSJ A Q9Z0U1 UNP 1 1 cloning artifact SER 2 2CSJ A Q9Z0U1 UNP 2 1 cloning artifact SER 3 2CSJ A Q9Z0U1 UNP 3 1 cloning artifact GLY 4 2CSJ A Q9Z0U1 UNP 4 1 cloning artifact SER 5 2CSJ A Q9Z0U1 UNP 5 1 cloning artifact SER 6 2CSJ A Q9Z0U1 UNP 6 1 cloning artifact GLY 7 2CSJ A Q9Z0U1 UNP 7 1 cloning artifact SER 112 2CSJ A Q9Z0U1 UNP 112 1 cloning artifact GLY 113 2CSJ A Q9Z0U1 UNP 113 1 cloning artifact PRO 114 2CSJ A Q9Z0U1 UNP 114 1 cloning artifact SER 115 2CSJ A Q9Z0U1 UNP 115 1 cloning artifact SER 116 2CSJ A Q9Z0U1 UNP 116 1 cloning artifact GLY 117 2CSJ A Q9Z0U1 UNP 117 3 2 anti-parallel anti-parallel anti-parallel A VAL 11 A VAL 11 A GLN 21 A GLN 21 A ILE 95 A ILE 95 A LYS 105 A LYS 105 A ARG 68 A ARG 68 A VAL 72 A VAL 72 A ILE 30 A ILE 30 A SER 33 A SER 33 A VAL 49 A VAL 49 A VAL 53 A VAL 53