0.010366
0.005985
0.000000
0.000000
0.011970
0.000000
0.000000
0.000000
0.014810
0.00000
0.00000
0.00000
Kohno, T.
Hochigai, H.
Yamashita, E.
Tsukihara, T.
Kanaoka, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
96.470
96.470
67.520
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C24 H42 N6 O3
462.629
SM-25453
(2-(9-((R)-1-(HYDROXYCARBAMOYL)-5-AMINOPENTYLCARBAMOYL)NONYL)BENZYL)GUANIDINE; GUANIDINOMETHYLBENZIL D-LYSINE HYDROXAMATE
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CA
Y
75
N
C
Y
76
N
C
Y
77
N
C
Y
78
N
C
Y
79
N
C
Y
80
N
C
N
81
N
C
N
82
N
C
N
83
N
C
N
84
N
C
N
85
N
C
N
86
N
C
N
87
N
C
N
88
N
C
N
89
N
C
N
90
N
C
N
91
N
N
N
92
R
C
N
93
N
O
N
94
N
C
N
95
N
C
N
96
N
N
N
97
N
C
N
98
N
C
N
99
N
C
N
100
N
N
N
101
N
C
N
102
N
N
N
103
N
C
N
104
N
N
N
105
N
N
N
106
N
O
N
107
N
O
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
N
N
151
S
C
N
152
N
C
N
153
N
O
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
O
N
158
N
N
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
N
N
171
S
C
N
172
N
C
N
173
N
O
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
O
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
N
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
O
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
N
N
200
S
C
N
201
N
C
N
202
N
O
N
203
N
C
Y
204
N
C
Y
205
N
N
Y
206
N
C
Y
207
N
C
Y
208
N
N
N
209
N
O
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
O
N
221
N
H
N
222
N
H
N
223
N
N
N
224
S
C
N
225
N
C
N
226
N
O
N
227
S
C
N
228
N
C
N
229
N
C
N
230
N
C
N
231
N
O
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
N
N
246
S
C
N
247
N
C
N
248
N
O
N
249
N
C
N
250
N
C
N
251
N
C
N
252
N
C
N
253
N
O
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
N
N
268
S
C
N
269
N
C
N
270
N
O
N
271
N
C
N
272
N
C
N
273
N
C
N
274
N
C
N
275
N
N
N
276
N
O
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
N
N
293
S
C
N
294
N
C
N
295
N
O
N
296
N
C
N
297
N
C
N
298
N
S
N
299
N
C
N
300
N
O
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
N
N
313
S
C
N
314
N
C
N
315
N
O
N
316
N
C
Y
317
N
C
Y
318
N
C
Y
319
N
C
Y
320
N
C
Y
321
N
C
Y
322
N
C
N
323
N
O
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
N
N
336
S
C
N
337
N
C
N
338
N
O
N
339
N
C
N
340
N
C
N
341
N
C
N
342
N
O
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
N
N
353
S
C
N
354
N
C
N
355
N
O
N
356
N
C
N
357
N
O
N
358
N
O
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
N
N
367
S
C
N
368
N
C
N
369
N
O
N
370
R
C
N
371
N
O
N
372
N
C
N
373
N
O
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
N
N
384
S
C
N
385
N
C
N
386
N
O
N
387
N
C
Y
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
N
Y
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
C
N
397
N
O
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
N
N
411
S
C
N
412
N
C
N
413
N
O
N
414
N
C
Y
415
N
C
Y
416
N
C
Y
417
N
C
Y
418
N
C
Y
419
N
C
Y
420
N
C
N
421
N
O
N
422
N
O
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
N
N
435
S
C
N
436
N
C
N
437
N
O
N
438
N
C
N
439
N
C
N
440
N
C
N
441
N
O
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
Y
70
N
doub
Y
71
N
sing
N
72
N
sing
Y
73
N
sing
N
74
N
sing
Y
75
N
doub
N
76
N
sing
Y
77
N
sing
N
78
N
sing
Y
79
N
doub
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
Z
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
doub
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
doub
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
Y
202
N
sing
Y
203
N
doub
Y
204
N
doub
N
205
N
sing
Y
206
N
sing
N
207
N
sing
Y
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
doub
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
Y
310
N
doub
Y
311
N
sing
Y
312
N
sing
N
313
N
sing
Y
314
N
doub
N
315
N
sing
Y
316
N
doub
N
317
N
sing
Y
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
doub
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
Y
379
N
doub
Y
380
N
sing
Y
381
N
sing
N
382
N
sing
Y
383
N
doub
Y
384
N
sing
Y
385
N
sing
N
386
N
sing
Y
387
N
sing
Y
388
N
doub
N
389
N
sing
Y
390
N
doub
N
391
N
sing
Y
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
doub
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
Y
407
N
doub
Y
408
N
sing
Y
409
N
sing
N
410
N
sing
Y
411
N
doub
N
412
N
sing
Y
413
N
doub
N
414
N
sing
Y
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
doub
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
US
Biochem.Biophys.Res.Commun.
BBRCA9
0146
0006-291X
344
315
322
10.1016/j.bbrc.2006.03.098
16603129
Crystal structures of the catalytic domain of human stromelysin-1 (MMP-3) and collagenase-3 (MMP-13) with a hydroxamic acid inhibitor SM-25453
2006
10.2210/pdb2d1n/pdb
pdb_00002d1n
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
2000-02-11
RIGAKU RAXIS IV
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
18664.875
Collagenase 3
3.4.24.-
C-Terminal catalytic domain
2
man
polymer
65.409
ZINC ION
6
syn
non-polymer
40.078
CALCIUM ION
6
syn
non-polymer
462.629
SM-25453
2
syn
non-polymer
18.015
water
49
nat
water
Matrix metalloproteinase-13, MMP-13
no
no
YNVFPRTLKWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSG
LLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQ
SLYGPG
YNVFPRTLKWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSG
LLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQ
SLYGPG
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
9606
Homo sapiens
562
Escherichia coli
1
5.0
75.3
VAPOR DIFFUSION, HANGING DROP
7.5
potassium sodium tartrate, hepes, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
diffrn_source
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Data collection
Data collection
Database references
Derived calculations
Refinement description
Structure summary
1
0
2006-06-27
1
1
2008-04-30
1
2
2011-07-13
1
3
2018-07-18
1
4
2023-10-25
_diffrn_source.type
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Stromelysin-1 (MMP-3) complexed to a hydroxamic acid inhibitor
PDBJ
Y
PDBJ
2005-08-29
REL
REL
ZN
ZINC ION
CA
CALCIUM ION
FA4
SM-25453
HOH
water
830C
PDB Entry 830C
PDB
experimental model
ZN2
270
2
ZN
ZN
270
A
ZN2
271
2
ZN
ZN
271
A
CA2
272
3
CA
CA
272
A
CA2
273
3
CA
CA
273
A
CA2
274
3
CA
CA
274
A
ZN2
285
2
ZN
ZN
285
A
ZN2
286
2
ZN
ZN
286
A
FA2
1
4
FA4
FA4
1001
A
ZN2
280
2
ZN
ZN
280
B
ZN2
281
2
ZN
ZN
281
B
CA2
282
3
CA
CA
282
B
CA2
283
3
CA
CA
283
B
CA2
284
3
CA
CA
284
B
FA2
2
4
FA4
FA4
1002
B
HOH
1
5
HOH
HOH
1
A
HOH
3
5
HOH
HOH
3
A
HOH
4
5
HOH
HOH
4
A
HOH
7
5
HOH
HOH
7
A
HOH
8
5
HOH
HOH
8
A
HOH
9
5
HOH
HOH
9
A
HOH
10
5
HOH
HOH
10
A
HOH
11
5
HOH
HOH
11
A
HOH
12
5
HOH
HOH
12
A
HOH
13
5
HOH
HOH
13
A
HOH
22
5
HOH
HOH
22
A
HOH
23
5
HOH
HOH
23
A
HOH
26
5
HOH
HOH
26
A
HOH
28
5
HOH
HOH
28
A
HOH
29
5
HOH
HOH
29
A
HOH
30
5
HOH
HOH
30
A
HOH
31
5
HOH
HOH
31
A
HOH
39
5
HOH
HOH
39
A
HOH
41
5
HOH
HOH
41
A
HOH
43
5
HOH
HOH
43
A
HOH
44
5
HOH
HOH
44
A
HOH
45
5
HOH
HOH
45
A
HOH
46
5
HOH
HOH
46
A
HOH
47
5
HOH
HOH
47
A
HOH
48
5
HOH
HOH
48
A
HOH
49
5
HOH
HOH
49
A
HOH
2
5
HOH
HOH
2
B
HOH
5
5
HOH
HOH
5
B
HOH
6
5
HOH
HOH
6
B
HOH
14
5
HOH
HOH
14
B
HOH
15
5
HOH
HOH
15
B
HOH
16
5
HOH
HOH
16
B
HOH
17
5
HOH
HOH
17
B
HOH
18
5
HOH
HOH
18
B
HOH
19
5
HOH
HOH
19
B
HOH
20
5
HOH
HOH
20
B
HOH
21
5
HOH
HOH
21
B
HOH
24
5
HOH
HOH
24
B
HOH
25
5
HOH
HOH
25
B
HOH
27
5
HOH
HOH
27
B
HOH
32
5
HOH
HOH
32
B
HOH
33
5
HOH
HOH
33
B
HOH
34
5
HOH
HOH
34
B
HOH
35
5
HOH
HOH
35
B
HOH
36
5
HOH
HOH
36
B
HOH
37
5
HOH
HOH
37
B
HOH
38
5
HOH
HOH
38
B
HOH
40
5
HOH
HOH
40
B
HOH
42
5
HOH
HOH
42
B
TYR
104
n
1
TYR
104
A
ASN
105
n
2
ASN
105
A
VAL
106
n
3
VAL
106
A
PHE
107
n
4
PHE
107
A
PRO
108
n
5
PRO
108
A
ARG
109
n
6
ARG
109
A
THR
110
n
7
THR
110
A
LEU
111
n
8
LEU
111
A
LYS
112
n
9
LYS
112
A
TRP
113
n
10
TRP
113
A
SER
114
n
11
SER
114
A
LYS
115
n
12
LYS
115
A
MET
116
n
13
MET
116
A
ASN
117
n
14
ASN
117
A
LEU
118
n
15
LEU
118
A
THR
119
n
16
THR
119
A
TYR
120
n
17
TYR
120
A
ARG
121
n
18
ARG
121
A
ILE
122
n
19
ILE
122
A
VAL
123
n
20
VAL
123
A
ASN
124
n
21
ASN
124
A
TYR
125
n
22
TYR
125
A
THR
126
n
23
THR
126
A
PRO
127
n
24
PRO
127
A
ASP
128
n
25
ASP
128
A
MET
129
n
26
MET
129
A
THR
130
n
27
THR
130
A
HIS
131
n
28
HIS
131
A
SER
132
n
29
SER
132
A
GLU
133
n
30
GLU
133
A
VAL
134
n
31
VAL
134
A
GLU
135
n
32
GLU
135
A
LYS
136
n
33
LYS
136
A
ALA
137
n
34
ALA
137
A
PHE
138
n
35
PHE
138
A
LYS
139
n
36
LYS
139
A
LYS
140
n
37
LYS
140
A
ALA
141
n
38
ALA
141
A
PHE
142
n
39
PHE
142
A
LYS
143
n
40
LYS
143
A
VAL
144
n
41
VAL
144
A
TRP
145
n
42
TRP
145
A
SER
146
n
43
SER
146
A
ASP
147
n
44
ASP
147
A
VAL
148
n
45
VAL
148
A
THR
149
n
46
THR
149
A
PRO
150
n
47
PRO
150
A
LEU
151
n
48
LEU
151
A
ASN
152
n
49
ASN
152
A
PHE
153
n
50
PHE
153
A
THR
154
n
51
THR
154
A
ARG
155
n
52
ARG
155
A
LEU
156
n
53
LEU
156
A
HIS
157
n
54
HIS
157
A
ASP
158
n
55
ASP
158
A
GLY
159
n
56
GLY
159
A
ILE
160
n
57
ILE
160
A
ALA
161
n
58
ALA
161
A
ASP
162
n
59
ASP
162
A
ILE
163
n
60
ILE
163
A
MET
164
n
61
MET
164
A
ILE
165
n
62
ILE
165
A
SER
166
n
63
SER
166
A
PHE
167
n
64
PHE
167
A
GLY
168
n
65
GLY
168
A
ILE
169
n
66
ILE
169
A
LYS
170
n
67
LYS
170
A
GLU
171
n
68
GLU
171
A
HIS
172
n
69
HIS
172
A
GLY
173
n
70
GLY
173
A
ASP
174
n
71
ASP
174
A
PHE
175
n
72
PHE
175
A
TYR
176
n
73
TYR
176
A
PRO
177
n
74
PRO
177
A
PHE
178
n
75
PHE
178
A
ASP
179
n
76
ASP
179
A
GLY
180
n
77
GLY
180
A
PRO
181
n
78
PRO
181
A
SER
182
n
79
SER
182
A
GLY
183
n
80
GLY
183
A
LEU
184
n
81
LEU
184
A
LEU
185
n
82
LEU
185
A
ALA
186
n
83
ALA
186
A
HIS
187
n
84
HIS
187
A
ALA
188
n
85
ALA
188
A
PHE
189
n
86
PHE
189
A
PRO
190
n
87
PRO
190
A
PRO
191
n
88
PRO
191
A
GLY
192
n
89
GLY
192
A
PRO
193
n
90
PRO
193
A
ASN
194
n
91
ASN
194
A
TYR
195
n
92
TYR
195
A
GLY
196
n
93
GLY
196
A
GLY
197
n
94
GLY
197
A
ASP
198
n
95
ASP
198
A
ALA
199
n
96
ALA
199
A
HIS
200
n
97
HIS
200
A
PHE
201
n
98
PHE
201
A
ASP
202
n
99
ASP
202
A
ASP
203
n
100
ASP
203
A
ASP
204
n
101
ASP
204
A
GLU
205
n
102
GLU
205
A
THR
206
n
103
THR
206
A
TRP
207
n
104
TRP
207
A
THR
208
n
105
THR
208
A
SER
209
n
106
SER
209
A
SER
210
n
107
SER
210
A
SER
211
n
108
SER
211
A
LYS
212
n
109
LYS
212
A
GLY
213
n
110
GLY
213
A
TYR
214
n
111
TYR
214
A
ASN
215
n
112
ASN
215
A
LEU
216
n
113
LEU
216
A
PHE
217
n
114
PHE
217
A
LEU
218
n
115
LEU
218
A
VAL
219
n
116
VAL
219
A
ALA
220
n
117
ALA
220
A
ALA
221
n
118
ALA
221
A
HIS
222
n
119
HIS
222
A
GLU
223
n
120
GLU
223
A
PHE
224
n
121
PHE
224
A
GLY
225
n
122
GLY
225
A
HIS
226
n
123
HIS
226
A
SER
227
n
124
SER
227
A
LEU
228
n
125
LEU
228
A
GLY
229
n
126
GLY
229
A
LEU
230
n
127
LEU
230
A
ASP
231
n
128
ASP
231
A
HIS
232
n
129
HIS
232
A
SER
233
n
130
SER
233
A
LYS
234
n
131
LYS
234
A
ASP
235
n
132
ASP
235
A
PRO
236
n
133
PRO
236
A
GLY
237
n
134
GLY
237
A
ALA
238
n
135
ALA
238
A
LEU
239
n
136
LEU
239
A
MET
240
n
137
MET
240
A
PHE
241
n
138
PHE
241
A
PRO
242
n
139
PRO
242
A
ILE
243
n
140
ILE
243
A
TYR
244
n
141
TYR
244
A
THR
245
n
142
THR
245
A
TYR
246
n
143
TYR
246
A
THR
247
n
144
THR
247
A
GLY
248
n
145
GLY
248
A
LYS
249
n
146
LYS
249
A
SER
250
n
147
SER
250
A
HIS
251
n
148
HIS
251
A
PHE
252
n
149
PHE
252
A
MET
253
n
150
MET
253
A
LEU
254
n
151
LEU
254
A
PRO
255
n
152
PRO
255
A
ASP
256
n
153
ASP
256
A
ASP
257
n
154
ASP
257
A
ASP
258
n
155
ASP
258
A
VAL
259
n
156
VAL
259
A
GLN
260
n
157
GLN
260
A
GLY
261
n
158
GLY
261
A
ILE
262
n
159
ILE
262
A
GLN
263
n
160
GLN
263
A
SER
264
n
161
SER
264
A
LEU
265
n
162
LEU
265
A
TYR
266
n
163
TYR
266
A
GLY
267
n
164
GLY
267
A
PRO
268
n
165
PRO
268
A
GLY
269
n
166
GLY
269
A
TYR
104
n
1
TYR
104
B
ASN
105
n
2
ASN
105
B
VAL
106
n
3
VAL
106
B
PHE
107
n
4
PHE
107
B
PRO
108
n
5
PRO
108
B
ARG
109
n
6
ARG
109
B
THR
110
n
7
THR
110
B
LEU
111
n
8
LEU
111
B
LYS
112
n
9
LYS
112
B
TRP
113
n
10
TRP
113
B
SER
114
n
11
SER
114
B
LYS
115
n
12
LYS
115
B
MET
116
n
13
MET
116
B
ASN
117
n
14
ASN
117
B
LEU
118
n
15
LEU
118
B
THR
119
n
16
THR
119
B
TYR
120
n
17
TYR
120
B
ARG
121
n
18
ARG
121
B
ILE
122
n
19
ILE
122
B
VAL
123
n
20
VAL
123
B
ASN
124
n
21
ASN
124
B
TYR
125
n
22
TYR
125
B
THR
126
n
23
THR
126
B
PRO
127
n
24
PRO
127
B
ASP
128
n
25
ASP
128
B
MET
129
n
26
MET
129
B
THR
130
n
27
THR
130
B
HIS
131
n
28
HIS
131
B
SER
132
n
29
SER
132
B
GLU
133
n
30
GLU
133
B
VAL
134
n
31
VAL
134
B
GLU
135
n
32
GLU
135
B
LYS
136
n
33
LYS
136
B
ALA
137
n
34
ALA
137
B
PHE
138
n
35
PHE
138
B
LYS
139
n
36
LYS
139
B
LYS
140
n
37
LYS
140
B
ALA
141
n
38
ALA
141
B
PHE
142
n
39
PHE
142
B
LYS
143
n
40
LYS
143
B
VAL
144
n
41
VAL
144
B
TRP
145
n
42
TRP
145
B
SER
146
n
43
SER
146
B
ASP
147
n
44
ASP
147
B
VAL
148
n
45
VAL
148
B
THR
149
n
46
THR
149
B
PRO
150
n
47
PRO
150
B
LEU
151
n
48
LEU
151
B
ASN
152
n
49
ASN
152
B
PHE
153
n
50
PHE
153
B
THR
154
n
51
THR
154
B
ARG
155
n
52
ARG
155
B
LEU
156
n
53
LEU
156
B
HIS
157
n
54
HIS
157
B
ASP
158
n
55
ASP
158
B
GLY
159
n
56
GLY
159
B
ILE
160
n
57
ILE
160
B
ALA
161
n
58
ALA
161
B
ASP
162
n
59
ASP
162
B
ILE
163
n
60
ILE
163
B
MET
164
n
61
MET
164
B
ILE
165
n
62
ILE
165
B
SER
166
n
63
SER
166
B
PHE
167
n
64
PHE
167
B
GLY
168
n
65
GLY
168
B
ILE
169
n
66
ILE
169
B
LYS
170
n
67
LYS
170
B
GLU
171
n
68
GLU
171
B
HIS
172
n
69
HIS
172
B
GLY
173
n
70
GLY
173
B
ASP
174
n
71
ASP
174
B
PHE
175
n
72
PHE
175
B
TYR
176
n
73
TYR
176
B
PRO
177
n
74
PRO
177
B
PHE
178
n
75
PHE
178
B
ASP
179
n
76
ASP
179
B
GLY
180
n
77
GLY
180
B
PRO
181
n
78
PRO
181
B
SER
182
n
79
SER
182
B
GLY
183
n
80
GLY
183
B
LEU
184
n
81
LEU
184
B
LEU
185
n
82
LEU
185
B
ALA
186
n
83
ALA
186
B
HIS
187
n
84
HIS
187
B
ALA
188
n
85
ALA
188
B
PHE
189
n
86
PHE
189
B
PRO
190
n
87
PRO
190
B
PRO
191
n
88
PRO
191
B
GLY
192
n
89
GLY
192
B
PRO
193
n
90
PRO
193
B
ASN
194
n
91
ASN
194
B
TYR
195
n
92
TYR
195
B
GLY
196
n
93
GLY
196
B
GLY
197
n
94
GLY
197
B
ASP
198
n
95
ASP
198
B
ALA
199
n
96
ALA
199
B
HIS
200
n
97
HIS
200
B
PHE
201
n
98
PHE
201
B
ASP
202
n
99
ASP
202
B
ASP
203
n
100
ASP
203
B
ASP
204
n
101
ASP
204
B
GLU
205
n
102
GLU
205
B
THR
206
n
103
THR
206
B
TRP
207
n
104
TRP
207
B
THR
208
n
105
THR
208
B
SER
209
n
106
SER
209
B
SER
210
n
107
SER
210
B
SER
211
n
108
SER
211
B
LYS
212
n
109
LYS
212
B
GLY
213
n
110
GLY
213
B
TYR
214
n
111
TYR
214
B
ASN
215
n
112
ASN
215
B
LEU
216
n
113
LEU
216
B
PHE
217
n
114
PHE
217
B
LEU
218
n
115
LEU
218
B
VAL
219
n
116
VAL
219
B
ALA
220
n
117
ALA
220
B
ALA
221
n
118
ALA
221
B
HIS
222
n
119
HIS
222
B
GLU
223
n
120
GLU
223
B
PHE
224
n
121
PHE
224
B
GLY
225
n
122
GLY
225
B
HIS
226
n
123
HIS
226
B
SER
227
n
124
SER
227
B
LEU
228
n
125
LEU
228
B
GLY
229
n
126
GLY
229
B
LEU
230
n
127
LEU
230
B
ASP
231
n
128
ASP
231
B
HIS
232
n
129
HIS
232
B
SER
233
n
130
SER
233
B
LYS
234
n
131
LYS
234
B
ASP
235
n
132
ASP
235
B
PRO
236
n
133
PRO
236
B
GLY
237
n
134
GLY
237
B
ALA
238
n
135
ALA
238
B
LEU
239
n
136
LEU
239
B
MET
240
n
137
MET
240
B
PHE
241
n
138
PHE
241
B
PRO
242
n
139
PRO
242
B
ILE
243
n
140
ILE
243
B
TYR
244
n
141
TYR
244
B
THR
245
n
142
THR
245
B
TYR
246
n
143
TYR
246
B
THR
247
n
144
THR
247
B
GLY
248
n
145
GLY
248
B
LYS
249
n
146
LYS
249
B
SER
250
n
147
SER
250
B
HIS
251
n
148
HIS
251
B
PHE
252
n
149
PHE
252
B
MET
253
n
150
MET
253
B
LEU
254
n
151
LEU
254
B
PRO
255
n
152
PRO
255
B
ASP
256
n
153
ASP
256
B
ASP
257
n
154
ASP
257
B
ASP
258
n
155
ASP
258
B
VAL
259
n
156
VAL
259
B
GLN
260
n
157
GLN
260
B
GLY
261
n
158
GLY
261
B
ILE
262
n
159
ILE
262
B
GLN
263
n
160
GLN
263
B
SER
264
n
161
SER
264
B
LEU
265
n
162
LEU
265
B
TYR
266
n
163
TYR
266
B
GLY
267
n
164
GLY
267
B
PRO
268
n
165
PRO
268
B
GLY
269
n
166
GLY
269
B
author_and_software_defined_assembly
PQS
1
monomeric
author_and_software_defined_assembly
PQS
1
monomeric
A
HOH
7
Q
O
HOH
1_555
A
ZN
285
H
ZN
ZN
1_555
A
GLU
135
A
OE1
GLU
32
1_555
154.8
A
HOH
7
Q
O
HOH
1_555
A
ZN
285
H
ZN
ZN
1_555
B
HIS
157
B
NE2
HIS
54
1_555
100.2
A
GLU
135
A
OE1
GLU
32
1_555
A
ZN
285
H
ZN
ZN
1_555
B
HIS
157
B
NE2
HIS
54
1_555
101.0
A
HOH
8
Q
O
HOH
1_555
A
ZN
286
I
ZN
ZN
1_555
A
HIS
157
A
NE2
HIS
54
1_555
124.8
A
HOH
8
Q
O
HOH
1_555
A
ZN
286
I
ZN
ZN
1_555
B
GLU
135
B
OE1
GLU
32
1_555
118.2
A
HIS
157
A
NE2
HIS
54
1_555
A
ZN
286
I
ZN
ZN
1_555
B
GLU
135
B
OE1
GLU
32
1_555
112.9
A
HOH
11
Q
O
HOH
1_555
A
CA
273
F
CA
CA
1_555
A
HOH
41
Q
O
HOH
1_555
88.6
A
HOH
11
Q
O
HOH
1_555
A
CA
273
F
CA
CA
1_555
A
ASP
162
A
O
ASP
59
1_555
71.4
A
HOH
41
Q
O
HOH
1_555
A
CA
273
F
CA
CA
1_555
A
ASP
162
A
O
ASP
59
1_555
90.5
A
HOH
11
Q
O
HOH
1_555
A
CA
273
F
CA
CA
1_555
A
ASN
194
A
O
ASN
91
1_555
91.4
A
HOH
41
Q
O
HOH
1_555
A
CA
273
F
CA
CA
1_555
A
ASN
194
A
O
ASN
91
1_555
77.7
A
ASP
162
A
O
ASP
59
1_555
A
CA
273
F
CA
CA
1_555
A
ASN
194
A
O
ASN
91
1_555
159.6
A
HOH
11
Q
O
HOH
1_555
A
CA
273
F
CA
CA
1_555
A
GLY
196
A
O
GLY
93
1_555
79.8
A
HOH
41
Q
O
HOH
1_555
A
CA
273
F
CA
CA
1_555
A
GLY
196
A
O
GLY
93
1_555
168.4
A
ASP
162
A
O
ASP
59
1_555
A
CA
273
F
CA
CA
1_555
A
GLY
196
A
O
GLY
93
1_555
85.2
A
ASN
194
A
O
ASN
91
1_555
A
CA
273
F
CA
CA
1_555
A
GLY
196
A
O
GLY
93
1_555
103.1
A
HOH
11
Q
O
HOH
1_555
A
CA
273
F
CA
CA
1_555
A
ASP
198
A
OD1
ASP
95
1_555
166.0
A
HOH
41
Q
O
HOH
1_555
A
CA
273
F
CA
CA
1_555
A
ASP
198
A
OD1
ASP
95
1_555
98.8
A
ASP
162
A
O
ASP
59
1_555
A
CA
273
F
CA
CA
1_555
A
ASP
198
A
OD1
ASP
95
1_555
96.5
A
ASN
194
A
O
ASN
91
1_555
A
CA
273
F
CA
CA
1_555
A
ASP
198
A
OD1
ASP
95
1_555
101.7
A
GLY
196
A
O
GLY
93
1_555
A
CA
273
F
CA
CA
1_555
A
ASP
198
A
OD1
ASP
95
1_555
92.4
A
ASP
128
A
OD2
ASP
25
1_555
A
CA
274
G
CA
CA
1_555
A
ASP
128
A
OD1
ASP
25
1_555
41.5
A
ASP
128
A
OD2
ASP
25
1_555
A
CA
274
G
CA
CA
1_555
A
ASP
203
A
OD2
ASP
100
1_555
106.3
A
ASP
128
A
OD1
ASP
25
1_555
A
CA
274
G
CA
CA
1_555
A
ASP
203
A
OD2
ASP
100
1_555
104.6
A
ASP
128
A
OD2
ASP
25
1_555
A
CA
274
G
CA
CA
1_555
A
ASP
203
A
O
ASP
100
1_555
173.6
A
ASP
128
A
OD1
ASP
25
1_555
A
CA
274
G
CA
CA
1_555
A
ASP
203
A
O
ASP
100
1_555
144.0
A
ASP
203
A
OD2
ASP
100
1_555
A
CA
274
G
CA
CA
1_555
A
ASP
203
A
O
ASP
100
1_555
76.4
A
ASP
128
A
OD2
ASP
25
1_555
A
CA
274
G
CA
CA
1_555
A
GLU
205
A
O
GLU
102
1_555
82.3
A
ASP
128
A
OD1
ASP
25
1_555
A
CA
274
G
CA
CA
1_555
A
GLU
205
A
O
GLU
102
1_555
114.7
A
ASP
203
A
OD2
ASP
100
1_555
A
CA
274
G
CA
CA
1_555
A
GLU
205
A
O
GLU
102
1_555
125.0
A
ASP
203
A
O
ASP
100
1_555
A
CA
274
G
CA
CA
1_555
A
GLU
205
A
O
GLU
102
1_555
91.4
A
HIS
172
A
NE2
HIS
69
1_555
A
ZN
271
D
ZN
ZN
1_555
A
ASP
174
A
OD2
ASP
71
1_555
111.2
A
HIS
172
A
NE2
HIS
69
1_555
A
ZN
271
D
ZN
ZN
1_555
A
HIS
187
A
NE2
HIS
84
1_555
109.3
A
ASP
174
A
OD2
ASP
71
1_555
A
ZN
271
D
ZN
ZN
1_555
A
HIS
187
A
NE2
HIS
84
1_555
116.1
A
HIS
172
A
NE2
HIS
69
1_555
A
ZN
271
D
ZN
ZN
1_555
A
HIS
200
A
ND1
HIS
97
1_555
108.5
A
ASP
174
A
OD2
ASP
71
1_555
A
ZN
271
D
ZN
ZN
1_555
A
HIS
200
A
ND1
HIS
97
1_555
90.8
A
HIS
187
A
NE2
HIS
84
1_555
A
ZN
271
D
ZN
ZN
1_555
A
HIS
200
A
ND1
HIS
97
1_555
119.7
A
ASP
179
A
OD1
ASP
76
1_555
A
CA
272
E
CA
CA
1_555
A
GLY
180
A
O
GLY
77
1_555
89.2
A
ASP
179
A
OD1
ASP
76
1_555
A
CA
272
E
CA
CA
1_555
A
SER
182
A
O
SER
79
1_555
77.1
A
GLY
180
A
O
GLY
77
1_555
A
CA
272
E
CA
CA
1_555
A
SER
182
A
O
SER
79
1_555
89.3
A
ASP
179
A
OD1
ASP
76
1_555
A
CA
272
E
CA
CA
1_555
A
LEU
184
A
O
LEU
81
1_555
97.3
A
GLY
180
A
O
GLY
77
1_555
A
CA
272
E
CA
CA
1_555
A
LEU
184
A
O
LEU
81
1_555
173.4
A
SER
182
A
O
SER
79
1_555
A
CA
272
E
CA
CA
1_555
A
LEU
184
A
O
LEU
81
1_555
92.8
A
ASP
179
A
OD1
ASP
76
1_555
A
CA
272
E
CA
CA
1_555
A
ASP
202
A
OD2
ASP
99
1_555
107.7
A
GLY
180
A
O
GLY
77
1_555
A
CA
272
E
CA
CA
1_555
A
ASP
202
A
OD2
ASP
99
1_555
84.1
A
SER
182
A
O
SER
79
1_555
A
CA
272
E
CA
CA
1_555
A
ASP
202
A
OD2
ASP
99
1_555
171.8
A
LEU
184
A
O
LEU
81
1_555
A
CA
272
E
CA
CA
1_555
A
ASP
202
A
OD2
ASP
99
1_555
93.1
A
ASP
179
A
OD1
ASP
76
1_555
A
CA
272
E
CA
CA
1_555
A
GLU
205
A
OE2
GLU
102
1_555
160.9
A
GLY
180
A
O
GLY
77
1_555
A
CA
272
E
CA
CA
1_555
A
GLU
205
A
OE2
GLU
102
1_555
82.2
A
SER
182
A
O
SER
79
1_555
A
CA
272
E
CA
CA
1_555
A
GLU
205
A
OE2
GLU
102
1_555
85.7
A
LEU
184
A
O
LEU
81
1_555
A
CA
272
E
CA
CA
1_555
A
GLU
205
A
OE2
GLU
102
1_555
91.8
A
ASP
202
A
OD2
ASP
99
1_555
A
CA
272
E
CA
CA
1_555
A
GLU
205
A
OE2
GLU
102
1_555
88.5
A
HIS
222
A
NE2
HIS
119
1_555
A
ZN
270
C
ZN
ZN
1_555
A
HIS
226
A
NE2
HIS
123
1_555
100.2
A
HIS
222
A
NE2
HIS
119
1_555
A
ZN
270
C
ZN
ZN
1_555
A
HIS
232
A
NE2
HIS
129
1_555
103.1
A
HIS
226
A
NE2
HIS
123
1_555
A
ZN
270
C
ZN
ZN
1_555
A
HIS
232
A
NE2
HIS
129
1_555
100.4
A
HIS
222
A
NE2
HIS
119
1_555
A
ZN
270
C
ZN
ZN
1_555
A
FA4
1001
J
O32
FA4
1_555
83.0
A
HIS
226
A
NE2
HIS
123
1_555
A
ZN
270
C
ZN
ZN
1_555
A
FA4
1001
J
O32
FA4
1_555
108.4
A
HIS
232
A
NE2
HIS
129
1_555
A
ZN
270
C
ZN
ZN
1_555
A
FA4
1001
J
O32
FA4
1_555
149.1
A
HIS
222
A
NE2
HIS
119
1_555
A
ZN
270
C
ZN
ZN
1_555
A
FA4
1001
J
O33
FA4
1_555
147.6
A
HIS
226
A
NE2
HIS
123
1_555
A
ZN
270
C
ZN
ZN
1_555
A
FA4
1001
J
O33
FA4
1_555
109.2
A
HIS
232
A
NE2
HIS
129
1_555
A
ZN
270
C
ZN
ZN
1_555
A
FA4
1001
J
O33
FA4
1_555
85.2
A
FA4
1001
J
O32
FA4
1_555
A
ZN
270
C
ZN
ZN
1_555
A
FA4
1001
J
O33
FA4
1_555
75.1
B
HOH
18
R
O
HOH
1_555
B
CA
283
N
CA
CA
1_555
B
HOH
19
R
O
HOH
1_555
95.1
B
HOH
18
R
O
HOH
1_555
B
CA
283
N
CA
CA
1_555
B
ASP
162
B
O
ASP
59
1_555
68.2
B
HOH
19
R
O
HOH
1_555
B
CA
283
N
CA
CA
1_555
B
ASP
162
B
O
ASP
59
1_555
106.9
B
HOH
18
R
O
HOH
1_555
B
CA
283
N
CA
CA
1_555
B
ASN
194
B
O
ASN
91
1_555
83.9
B
HOH
19
R
O
HOH
1_555
B
CA
283
N
CA
CA
1_555
B
ASN
194
B
O
ASN
91
1_555
76.0
B
ASP
162
B
O
ASP
59
1_555
B
CA
283
N
CA
CA
1_555
B
ASN
194
B
O
ASN
91
1_555
152.0
B
HOH
18
R
O
HOH
1_555
B
CA
283
N
CA
CA
1_555
B
GLY
196
B
O
GLY
93
1_555
73.9
B
HOH
19
R
O
HOH
1_555
B
CA
283
N
CA
CA
1_555
B
GLY
196
B
O
GLY
93
1_555
162.2
B
ASP
162
B
O
ASP
59
1_555
B
CA
283
N
CA
CA
1_555
B
GLY
196
B
O
GLY
93
1_555
82.4
B
ASN
194
B
O
ASN
91
1_555
B
CA
283
N
CA
CA
1_555
B
GLY
196
B
O
GLY
93
1_555
88.7
B
HOH
18
R
O
HOH
1_555
B
CA
283
N
CA
CA
1_555
B
ASP
198
B
OD1
ASP
95
1_555
162.8
B
HOH
19
R
O
HOH
1_555
B
CA
283
N
CA
CA
1_555
B
ASP
198
B
OD1
ASP
95
1_555
102.1
B
ASP
162
B
O
ASP
59
1_555
B
CA
283
N
CA
CA
1_555
B
ASP
198
B
OD1
ASP
95
1_555
107.0
B
ASN
194
B
O
ASN
91
1_555
B
CA
283
N
CA
CA
1_555
B
ASP
198
B
OD1
ASP
95
1_555
99.4
B
GLY
196
B
O
GLY
93
1_555
B
CA
283
N
CA
CA
1_555
B
ASP
198
B
OD1
ASP
95
1_555
89.2
B
ASP
128
B
OD2
ASP
25
1_555
B
CA
284
O
CA
CA
1_555
B
ASP
128
B
OD1
ASP
25
1_555
45.3
B
ASP
128
B
OD2
ASP
25
1_555
B
CA
284
O
CA
CA
1_555
B
ASP
203
B
O
ASP
100
1_555
146.6
B
ASP
128
B
OD1
ASP
25
1_555
B
CA
284
O
CA
CA
1_555
B
ASP
203
B
O
ASP
100
1_555
167.1
B
ASP
128
B
OD2
ASP
25
1_555
B
CA
284
O
CA
CA
1_555
B
ASP
203
B
OD2
ASP
100
1_555
96.5
B
ASP
128
B
OD1
ASP
25
1_555
B
CA
284
O
CA
CA
1_555
B
ASP
203
B
OD2
ASP
100
1_555
108.5
B
ASP
203
B
O
ASP
100
1_555
B
CA
284
O
CA
CA
1_555
B
ASP
203
B
OD2
ASP
100
1_555
78.3
B
ASP
128
B
OD2
ASP
25
1_555
B
CA
284
O
CA
CA
1_555
B
GLU
205
B
O
GLU
102
1_555
70.0
B
ASP
128
B
OD1
ASP
25
1_555
B
CA
284
O
CA
CA
1_555
B
GLU
205
B
O
GLU
102
1_555
109.4
B
ASP
203
B
O
ASP
100
1_555
B
CA
284
O
CA
CA
1_555
B
GLU
205
B
O
GLU
102
1_555
78.9
B
ASP
203
B
OD2
ASP
100
1_555
B
CA
284
O
CA
CA
1_555
B
GLU
205
B
O
GLU
102
1_555
103.0
B
HIS
172
B
NE2
HIS
69
1_555
B
ZN
281
L
ZN
ZN
1_555
B
ASP
174
B
OD2
ASP
71
1_555
116.7
B
HIS
172
B
NE2
HIS
69
1_555
B
ZN
281
L
ZN
ZN
1_555
B
HIS
187
B
NE2
HIS
84
1_555
118.5
B
ASP
174
B
OD2
ASP
71
1_555
B
ZN
281
L
ZN
ZN
1_555
B
HIS
187
B
NE2
HIS
84
1_555
113.3
B
HIS
172
B
NE2
HIS
69
1_555
B
ZN
281
L
ZN
ZN
1_555
B
HIS
200
B
ND1
HIS
97
1_555
101.1
B
ASP
174
B
OD2
ASP
71
1_555
B
ZN
281
L
ZN
ZN
1_555
B
HIS
200
B
ND1
HIS
97
1_555
97.8
B
HIS
187
B
NE2
HIS
84
1_555
B
ZN
281
L
ZN
ZN
1_555
B
HIS
200
B
ND1
HIS
97
1_555
105.4
B
ASP
179
B
OD1
ASP
76
1_555
B
CA
282
M
CA
CA
1_555
B
GLY
180
B
O
GLY
77
1_555
87.9
B
ASP
179
B
OD1
ASP
76
1_555
B
CA
282
M
CA
CA
1_555
B
SER
182
B
O
SER
79
1_555
83.6
B
GLY
180
B
O
GLY
77
1_555
B
CA
282
M
CA
CA
1_555
B
SER
182
B
O
SER
79
1_555
87.5
B
ASP
179
B
OD1
ASP
76
1_555
B
CA
282
M
CA
CA
1_555
B
LEU
184
B
O
LEU
81
1_555
106.6
B
GLY
180
B
O
GLY
77
1_555
B
CA
282
M
CA
CA
1_555
B
LEU
184
B
O
LEU
81
1_555
165.0
B
SER
182
B
O
SER
79
1_555
B
CA
282
M
CA
CA
1_555
B
LEU
184
B
O
LEU
81
1_555
97.8
B
ASP
179
B
OD1
ASP
76
1_555
B
CA
282
M
CA
CA
1_555
B
ASP
202
B
OD2
ASP
99
1_555
113.8
B
GLY
180
B
O
GLY
77
1_555
B
CA
282
M
CA
CA
1_555
B
ASP
202
B
OD2
ASP
99
1_555
79.9
B
SER
182
B
O
SER
79
1_555
B
CA
282
M
CA
CA
1_555
B
ASP
202
B
OD2
ASP
99
1_555
157.9
B
LEU
184
B
O
LEU
81
1_555
B
CA
282
M
CA
CA
1_555
B
ASP
202
B
OD2
ASP
99
1_555
90.4
B
ASP
179
B
OD1
ASP
76
1_555
B
CA
282
M
CA
CA
1_555
B
GLU
205
B
OE2
GLU
102
1_555
160.7
B
GLY
180
B
O
GLY
77
1_555
B
CA
282
M
CA
CA
1_555
B
GLU
205
B
OE2
GLU
102
1_555
79.9
B
SER
182
B
O
SER
79
1_555
B
CA
282
M
CA
CA
1_555
B
GLU
205
B
OE2
GLU
102
1_555
81.0
B
LEU
184
B
O
LEU
81
1_555
B
CA
282
M
CA
CA
1_555
B
GLU
205
B
OE2
GLU
102
1_555
87.0
B
ASP
202
B
OD2
ASP
99
1_555
B
CA
282
M
CA
CA
1_555
B
GLU
205
B
OE2
GLU
102
1_555
78.9
B
HIS
222
B
NE2
HIS
119
1_555
B
ZN
280
K
ZN
ZN
1_555
B
HIS
226
B
NE2
HIS
123
1_555
94.8
B
HIS
222
B
NE2
HIS
119
1_555
B
ZN
280
K
ZN
ZN
1_555
B
HIS
232
B
NE2
HIS
129
1_555
107.8
B
HIS
226
B
NE2
HIS
123
1_555
B
ZN
280
K
ZN
ZN
1_555
B
HIS
232
B
NE2
HIS
129
1_555
90.9
B
HIS
222
B
NE2
HIS
119
1_555
B
ZN
280
K
ZN
ZN
1_555
B
FA4
1002
P
O33
FA4
1_555
158.0
B
HIS
226
B
NE2
HIS
123
1_555
B
ZN
280
K
ZN
ZN
1_555
B
FA4
1002
P
O33
FA4
1_555
96.3
B
HIS
232
B
NE2
HIS
129
1_555
B
ZN
280
K
ZN
ZN
1_555
B
FA4
1002
P
O33
FA4
1_555
90.9
B
HIS
222
B
NE2
HIS
119
1_555
B
ZN
280
K
ZN
ZN
1_555
B
FA4
1002
P
O32
FA4
1_555
90.9
B
HIS
226
B
NE2
HIS
123
1_555
B
ZN
280
K
ZN
ZN
1_555
B
FA4
1002
P
O32
FA4
1_555
97.1
B
HIS
232
B
NE2
HIS
129
1_555
B
ZN
280
K
ZN
ZN
1_555
B
FA4
1002
P
O32
FA4
1_555
159.0
B
FA4
1002
P
O33
FA4
1_555
B
ZN
280
K
ZN
ZN
1_555
B
FA4
1002
P
O32
FA4
1_555
69.0
B
HIS
222
B
NE2
HIS
119
1_555
B
ZN
280
K
ZN
ZN
1_555
B
FA4
1002
P
N22
FA4
1_555
107.4
B
HIS
226
B
NE2
HIS
123
1_555
B
ZN
280
K
ZN
ZN
1_555
B
FA4
1002
P
N22
FA4
1_555
120.0
B
HIS
232
B
NE2
HIS
129
1_555
B
ZN
280
K
ZN
ZN
1_555
B
FA4
1002
P
N22
FA4
1_555
130.1
B
FA4
1002
P
O33
FA4
1_555
B
ZN
280
K
ZN
ZN
1_555
B
FA4
1002
P
N22
FA4
1_555
50.7
B
FA4
1002
P
O32
FA4
1_555
B
ZN
280
K
ZN
ZN
1_555
B
FA4
1002
P
N22
FA4
1_555
30.7
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ASN
152
A
O
ASN
49
A
N
LEU
118
A
N
LEU
15
A
N
ARG
121
A
N
ARG
18
A
O
ILE
165
A
O
ILE
62
A
N
SER
166
A
N
SER
63
A
O
PHE
201
A
O
PHE
98
A
O
HIS
200
A
O
HIS
97
A
N
HIS
187
A
N
HIS
84
A
N
THR
208
A
N
THR
105
A
O
TYR
214
A
O
TYR
111
B
O
ASN
152
B
O
ASN
49
B
N
LEU
118
B
N
LEU
15
B
N
ARG
121
B
N
ARG
18
B
O
ILE
165
B
O
ILE
62
B
N
GLY
168
B
N
GLY
65
B
O
PHE
201
B
O
PHE
98
B
O
HIS
200
B
O
HIS
97
B
N
HIS
187
B
N
HIS
84
B
N
THR
208
B
N
THR
105
B
O
TYR
214
B
O
TYR
111
1
A
LYS
170
49.53
-124.06
1
A
SER
182
64.72
-169.55
1
A
ASN
194
58.68
-119.77
1
A
PRO
236
-59.53
-9.74
1
A
PRO
242
-59.92
27.68
1
B
LYS
170
48.70
-125.13
1
B
SER
182
60.49
-165.25
1
B
ASN
194
57.37
-120.95
1
B
PRO
236
-59.60
-9.14
1
B
PRO
242
-61.46
32.97
1
B
HIS
251
63.06
74.53
1
B
PRO
268
-67.79
-170.86
protein_rep.param
protein.top
water_rep.param
water.top
ion.param
ion.top
fa2.param
fa2.top
56.2
-5.72
2.61
0.00
-5.72
0.00
11.44
0.239
0.005
0.218
0.221
0.218
2.37
9.98
2728
27444
27420
10.0
RANDOM
1380522.74
0.000000
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
PDB Entry 830C
Engh & Huber
FLAT MODEL
65.1508
0.467474
0.37
0.34
5.00
0.52
0.50
2.37
9.98
49
2771
78
0
2644
0.008
1.2
23.9
0.86
0.375
0.019
0.375
2.52
391
3909
6
9.1
91.8
2.37
30
2D1N
27785
27785
0
0
1
97.9
refinement
CNS
1.1
data reduction
MOSFLM
data scaling
CCP4
(SCALA)
phasing
AMoRE
Collagenase-3 (MMP-13) complexed to a hydroxamic acid inhibitor
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
2
N
N
2
N
N
4
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
4
N
N
5
N
N
5
N
N
A
PHE
107
A
PHE
4
HELX_P
A
LEU
111
A
LEU
8
5
1
5
A
THR
130
A
THR
27
HELX_P
A
ASP
147
A
ASP
44
1
2
18
A
LEU
216
A
LEU
113
HELX_P
A
LEU
228
A
LEU
125
1
3
13
A
PRO
255
A
PRO
152
HELX_P
A
GLY
267
A
GLY
164
1
4
13
B
PHE
107
B
PHE
4
HELX_P
B
LEU
111
B
LEU
8
5
5
5
B
THR
130
B
THR
27
HELX_P
B
ASP
147
B
ASP
44
1
6
18
B
LEU
216
B
LEU
113
HELX_P
B
GLY
229
B
GLY
126
1
7
14
B
PRO
255
B
PRO
152
HELX_P
B
GLY
267
B
GLY
164
1
8
13
metalc
2.757
A
HOH
7
Q
O
HOH
1_555
A
ZN
285
H
ZN
ZN
1_555
metalc
2.676
A
HOH
8
Q
O
HOH
1_555
A
ZN
286
I
ZN
ZN
1_555
metalc
2.866
A
HOH
11
Q
O
HOH
1_555
A
CA
273
F
CA
CA
1_555
metalc
2.544
A
HOH
41
Q
O
HOH
1_555
A
CA
273
F
CA
CA
1_555
metalc
2.431
A
ASP
128
A
OD2
ASP
25
1_555
A
CA
274
G
CA
CA
1_555
metalc
3.312
A
ASP
128
A
OD1
ASP
25
1_555
A
CA
274
G
CA
CA
1_555
metalc
1.923
A
GLU
135
A
OE1
GLU
32
1_555
A
ZN
285
H
ZN
ZN
1_555
metalc
2.114
A
HIS
157
A
NE2
HIS
54
1_555
A
ZN
286
I
ZN
ZN
1_555
metalc
2.444
A
ASP
162
A
O
ASP
59
1_555
A
CA
273
F
CA
CA
1_555
metalc
1.982
A
HIS
172
A
NE2
HIS
69
1_555
A
ZN
271
D
ZN
ZN
1_555
metalc
1.965
A
ASP
174
A
OD2
ASP
71
1_555
A
ZN
271
D
ZN
ZN
1_555
metalc
2.619
A
ASP
179
A
OD1
ASP
76
1_555
A
CA
272
E
CA
CA
1_555
metalc
2.301
A
GLY
180
A
O
GLY
77
1_555
A
CA
272
E
CA
CA
1_555
metalc
2.251
A
SER
182
A
O
SER
79
1_555
A
CA
272
E
CA
CA
1_555
metalc
2.289
A
LEU
184
A
O
LEU
81
1_555
A
CA
272
E
CA
CA
1_555
metalc
2.132
A
HIS
187
A
NE2
HIS
84
1_555
A
ZN
271
D
ZN
ZN
1_555
metalc
2.395
A
ASN
194
A
O
ASN
91
1_555
A
CA
273
F
CA
CA
1_555
metalc
2.299
A
GLY
196
A
O
GLY
93
1_555
A
CA
273
F
CA
CA
1_555
metalc
2.573
A
ASP
198
A
OD1
ASP
95
1_555
A
CA
273
F
CA
CA
1_555
metalc
1.937
A
HIS
200
A
ND1
HIS
97
1_555
A
ZN
271
D
ZN
ZN
1_555
metalc
2.410
A
ASP
202
A
OD2
ASP
99
1_555
A
CA
272
E
CA
CA
1_555
metalc
2.515
A
ASP
203
A
OD2
ASP
100
1_555
A
CA
274
G
CA
CA
1_555
metalc
2.506
A
ASP
203
A
O
ASP
100
1_555
A
CA
274
G
CA
CA
1_555
metalc
2.242
A
GLU
205
A
OE2
GLU
102
1_555
A
CA
272
E
CA
CA
1_555
metalc
2.304
A
GLU
205
A
O
GLU
102
1_555
A
CA
274
G
CA
CA
1_555
metalc
2.337
A
HIS
222
A
NE2
HIS
119
1_555
A
ZN
270
C
ZN
ZN
1_555
metalc
2.206
A
HIS
226
A
NE2
HIS
123
1_555
A
ZN
270
C
ZN
ZN
1_555
metalc
2.040
A
HIS
232
A
NE2
HIS
129
1_555
A
ZN
270
C
ZN
ZN
1_555
metalc
1.940
A
ZN
270
C
ZN
ZN
1_555
A
FA4
1001
J
O32
FA4
1_555
metalc
2.343
A
ZN
270
C
ZN
ZN
1_555
A
FA4
1001
J
O33
FA4
1_555
metalc
2.176
A
ZN
285
H
ZN
ZN
1_555
B
HIS
157
B
NE2
HIS
54
1_555
metalc
1.915
A
ZN
286
I
ZN
ZN
1_555
B
GLU
135
B
OE1
GLU
32
1_555
metalc
3.091
B
HOH
18
R
O
HOH
1_555
B
CA
283
N
CA
CA
1_555
metalc
2.539
B
HOH
19
R
O
HOH
1_555
B
CA
283
N
CA
CA
1_555
metalc
2.424
B
ASP
128
B
OD2
ASP
25
1_555
B
CA
284
O
CA
CA
1_555
metalc
3.084
B
ASP
128
B
OD1
ASP
25
1_555
B
CA
284
O
CA
CA
1_555
metalc
2.395
B
ASP
162
B
O
ASP
59
1_555
B
CA
283
N
CA
CA
1_555
metalc
1.959
B
HIS
172
B
NE2
HIS
69
1_555
B
ZN
281
L
ZN
ZN
1_555
metalc
2.053
B
ASP
174
B
OD2
ASP
71
1_555
B
ZN
281
L
ZN
ZN
1_555
metalc
2.419
B
ASP
179
B
OD1
ASP
76
1_555
B
CA
282
M
CA
CA
1_555
metalc
2.373
B
GLY
180
B
O
GLY
77
1_555
B
CA
282
M
CA
CA
1_555
metalc
2.228
B
SER
182
B
O
SER
79
1_555
B
CA
282
M
CA
CA
1_555
metalc
2.405
B
LEU
184
B
O
LEU
81
1_555
B
CA
282
M
CA
CA
1_555
metalc
2.022
B
HIS
187
B
NE2
HIS
84
1_555
B
ZN
281
L
ZN
ZN
1_555
metalc
2.384
B
ASN
194
B
O
ASN
91
1_555
B
CA
283
N
CA
CA
1_555
metalc
2.368
B
GLY
196
B
O
GLY
93
1_555
B
CA
283
N
CA
CA
1_555
metalc
2.373
B
ASP
198
B
OD1
ASP
95
1_555
B
CA
283
N
CA
CA
1_555
metalc
2.031
B
HIS
200
B
ND1
HIS
97
1_555
B
ZN
281
L
ZN
ZN
1_555
metalc
2.468
B
ASP
202
B
OD2
ASP
99
1_555
B
CA
282
M
CA
CA
1_555
metalc
2.328
B
ASP
203
B
O
ASP
100
1_555
B
CA
284
O
CA
CA
1_555
metalc
2.694
B
ASP
203
B
OD2
ASP
100
1_555
B
CA
284
O
CA
CA
1_555
metalc
2.401
B
GLU
205
B
OE2
GLU
102
1_555
B
CA
282
M
CA
CA
1_555
metalc
2.601
B
GLU
205
B
O
GLU
102
1_555
B
CA
284
O
CA
CA
1_555
metalc
2.242
B
HIS
222
B
NE2
HIS
119
1_555
B
ZN
280
K
ZN
ZN
1_555
metalc
2.264
B
HIS
226
B
NE2
HIS
123
1_555
B
ZN
280
K
ZN
ZN
1_555
metalc
2.000
B
HIS
232
B
NE2
HIS
129
1_555
B
ZN
280
K
ZN
ZN
1_555
metalc
2.529
B
ZN
280
K
ZN
ZN
1_555
B
FA4
1002
P
O33
FA4
1_555
metalc
2.026
B
ZN
280
K
ZN
ZN
1_555
B
FA4
1002
P
O32
FA4
1_555
metalc
2.697
B
ZN
280
K
ZN
ZN
1_555
B
FA4
1002
P
N22
FA4
1_555
HYDROLASE
hydorolase metalloprotease, HYDROLASE
MMP13_HUMAN
UNP
1
104
P45452
104
269
2D1N
104
269
P45452
A
1
1
166
104
269
2D1N
104
269
P45452
B
1
1
166
5
2
5
2
parallel
parallel
parallel
anti-parallel
parallel
parallel
parallel
parallel
anti-parallel
parallel
A
ASN
152
A
ASN
49
A
ARG
155
A
ARG
52
A
ASN
117
A
ASN
14
A
ILE
122
A
ILE
19
A
ILE
163
A
ILE
60
A
GLY
168
A
GLY
65
A
ALA
199
A
ALA
96
A
ASP
202
A
ASP
99
A
ALA
186
A
ALA
83
A
ALA
188
A
ALA
85
A
TRP
207
A
TRP
104
A
THR
208
A
THR
105
A
TYR
214
A
TYR
111
A
ASN
215
A
ASN
112
B
ASN
152
B
ASN
49
B
ARG
155
B
ARG
52
B
ASN
117
B
ASN
14
B
ILE
122
B
ILE
19
B
ILE
163
B
ILE
60
B
GLY
168
B
GLY
65
B
ALA
199
B
ALA
96
B
ASP
202
B
ASP
99
B
ALA
186
B
ALA
83
B
ALA
188
B
ALA
85
B
TRP
207
B
TRP
104
B
THR
208
B
THR
105
B
TYR
214
B
TYR
111
B
ASN
215
B
ASN
112
BINDING SITE FOR RESIDUE ZN A 270
A
ZN
270
Software
4
BINDING SITE FOR RESIDUE ZN A 271
A
ZN
271
Software
4
BINDING SITE FOR RESIDUE CA A 272
A
CA
272
Software
6
BINDING SITE FOR RESIDUE CA A 273
A
CA
273
Software
6
BINDING SITE FOR RESIDUE CA A 274
A
CA
274
Software
3
BINDING SITE FOR RESIDUE ZN B 280
B
ZN
280
Software
4
BINDING SITE FOR RESIDUE ZN B 281
B
ZN
281
Software
4
BINDING SITE FOR RESIDUE CA B 282
B
CA
282
Software
6
BINDING SITE FOR RESIDUE CA B 283
B
CA
283
Software
6
BINDING SITE FOR RESIDUE CA B 284
B
CA
284
Software
3
BINDING SITE FOR RESIDUE ZN A 285
A
ZN
285
Software
6
BINDING SITE FOR RESIDUE ZN A 286
A
ZN
286
Software
5
BINDING SITE FOR RESIDUE FA4 A 1001
A
FA4
1001
Software
17
BINDING SITE FOR RESIDUE FA4 B 1002
B
FA4
1002
Software
17
A
HIS
222
A
HIS
119
4
1_555
A
HIS
226
A
HIS
123
4
1_555
A
HIS
232
A
HIS
129
4
1_555
A
FA4
1001
J
FA4
4
1_555
A
HIS
172
A
HIS
69
4
1_555
A
ASP
174
A
ASP
71
4
1_555
A
HIS
187
A
HIS
84
4
1_555
A
HIS
200
A
HIS
97
4
1_555
A
ASP
179
A
ASP
76
6
1_555
A
GLY
180
A
GLY
77
6
1_555
A
SER
182
A
SER
79
6
1_555
A
LEU
184
A
LEU
81
6
1_555
A
ASP
202
A
ASP
99
6
1_555
A
GLU
205
A
GLU
102
6
1_555
A
HOH
11
Q
HOH
6
1_555
A
HOH
41
Q
HOH
6
1_555
A
ASP
162
A
ASP
59
6
1_555
A
ASN
194
A
ASN
91
6
1_555
A
GLY
196
A
GLY
93
6
1_555
A
ASP
198
A
ASP
95
6
1_555
A
ASP
128
A
ASP
25
3
1_555
A
ASP
203
A
ASP
100
3
1_555
A
GLU
205
A
GLU
102
3
1_555
B
HIS
222
B
HIS
119
4
1_555
B
HIS
226
B
HIS
123
4
1_555
B
HIS
232
B
HIS
129
4
1_555
B
FA4
1002
P
FA4
4
1_555
B
HIS
172
B
HIS
69
4
1_555
B
ASP
174
B
ASP
71
4
1_555
B
HIS
187
B
HIS
84
4
1_555
B
HIS
200
B
HIS
97
4
1_555
B
ASP
179
B
ASP
76
6
1_555
B
GLY
180
B
GLY
77
6
1_555
B
SER
182
B
SER
79
6
1_555
B
LEU
184
B
LEU
81
6
1_555
B
ASP
202
B
ASP
99
6
1_555
B
GLU
205
B
GLU
102
6
1_555
B
HOH
18
R
HOH
6
1_555
B
HOH
19
R
HOH
6
1_555
B
ASP
162
B
ASP
59
6
1_555
B
ASN
194
B
ASN
91
6
1_555
B
GLY
196
B
GLY
93
6
1_555
B
ASP
198
B
ASP
95
6
1_555
B
ASP
128
B
ASP
25
3
1_555
B
ASP
203
B
ASP
100
3
1_555
B
GLU
205
B
GLU
102
3
1_555
A
HOH
3
Q
HOH
6
1_555
A
HOH
4
Q
HOH
6
1_555
A
HOH
7
Q
HOH
6
1_555
A
GLU
135
A
GLU
32
6
1_555
A
ARG
155
A
ARG
52
6
1_555
B
HIS
157
B
HIS
54
6
1_555
A
HOH
8
Q
HOH
5
1_555
A
HIS
157
A
HIS
54
5
1_555
B
HOH
5
R
HOH
5
1_555
B
GLU
135
B
GLU
32
5
1_555
B
ARG
155
B
ARG
52
5
1_555
A
TYR
176
A
TYR
73
17
1_555
A
LEU
184
A
LEU
81
17
1_555
A
LEU
185
A
LEU
82
17
1_555
A
ALA
186
A
ALA
83
17
1_555
A
HIS
222
A
HIS
119
17
1_555
A
GLU
223
A
GLU
120
17
1_555
A
HIS
226
A
HIS
123
17
1_555
A
HIS
232
A
HIS
129
17
1_555
A
PRO
236
A
PRO
133
17
1_555
A
ALA
238
A
ALA
135
17
1_555
A
LEU
239
A
LEU
136
17
1_555
A
PHE
241
A
PHE
138
17
1_555
A
PRO
242
A
PRO
139
17
1_555
A
ILE
243
A
ILE
140
17
1_555
A
TYR
244
A
TYR
141
17
1_555
A
THR
245
A
THR
142
17
1_555
A
ZN
270
C
ZN
17
1_555
B
TYR
176
B
TYR
73
17
1_555
B
LEU
184
B
LEU
81
17
1_555
B
LEU
185
B
LEU
82
17
1_555
B
ALA
186
B
ALA
83
17
1_555
B
HIS
222
B
HIS
119
17
1_555
B
GLU
223
B
GLU
120
17
1_555
B
HIS
226
B
HIS
123
17
1_555
B
HIS
232
B
HIS
129
17
1_555
B
PRO
236
B
PRO
133
17
1_555
B
ALA
238
B
ALA
135
17
1_555
B
LEU
239
B
LEU
136
17
1_555
B
PHE
241
B
PHE
138
17
1_555
B
PRO
242
B
PRO
139
17
1_555
B
ILE
243
B
ILE
140
17
1_555
B
TYR
244
B
TYR
141
17
1_555
B
THR
245
B
THR
142
17
1_555
B
ZN
280
K
ZN
17
1_555
145
P 32