0.037793 0.000000 0.014758 0.000000 0.017188 0.000000 0.000000 0.000000 0.034799 0.000000 0.000000 0.000000 Harata, K. Akiba, T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 111.33 90.00 26.460 58.180 30.850 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking D2 O 20.028 DEUTERATED WATER non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking N O3 -1 62.005 NITRATE ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N D N 90 N D N 91 N N N 92 S C N 93 N C N 94 N O N 95 N C N 96 N C N 97 N C N 98 N O N 99 N N N 100 N O N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N N N 112 S C N 113 N C N 114 N O N 115 N C N 116 N C N 117 N C N 118 N O N 119 N O N 120 N O N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N N N 131 N C N 132 N C N 133 N O N 134 N O N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N N N 141 S C N 142 N C N 143 N O N 144 N C Y 145 N C Y 146 N N Y 147 N C Y 148 N C Y 149 N N N 150 N O N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 N O N 252 N O N 253 N O N 254 N N N 255 S C N 256 N C N 257 N O N 258 N C Y 259 N C Y 260 N C Y 261 N C Y 262 N C Y 263 N C Y 264 N C N 265 N O N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N N N 278 S C N 279 N C N 280 N O N 281 N C N 282 N C N 283 N C N 284 N O N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N N N 295 S C N 296 N C N 297 N O N 298 N C N 299 N O N 300 N O N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N N N 309 S C N 310 N C N 311 N O N 312 R C N 313 N O N 314 N C N 315 N O N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N N N 326 S C N 327 N C N 328 N O N 329 N C Y 330 N C Y 331 N C Y 332 N C Y 333 N N Y 334 N C Y 335 N C Y 336 N C Y 337 N C Y 338 N C N 339 N O N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N N N 353 S C N 354 N C N 355 N O N 356 N C Y 357 N C Y 358 N C Y 359 N C Y 360 N C Y 361 N C Y 362 N C N 363 N O N 364 N O N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N N N 377 S C N 378 N C N 379 N O N 380 N C N 381 N C N 382 N C N 383 N O N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N doub N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N doub N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N doub N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N doub N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N doub N 138 N sing N 139 N sing N 140 N sing N 141 N sing Y 142 N sing Y 143 N doub Y 144 N doub N 145 N sing Y 146 N sing N 147 N sing Y 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing Y 251 N doub Y 252 N sing Y 253 N sing N 254 N sing Y 255 N doub N 256 N sing Y 257 N doub N 258 N sing Y 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N doub N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N doub N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N doub N 316 N sing N 317 N sing N 318 N sing N 319 N sing Y 320 N doub Y 321 N sing Y 322 N sing N 323 N sing Y 324 N doub Y 325 N sing Y 326 N sing N 327 N sing Y 328 N sing Y 329 N doub N 330 N sing Y 331 N doub N 332 N sing Y 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N doub N 344 N sing N 345 N sing N 346 N sing N 347 N sing Y 348 N doub Y 349 N sing Y 350 N sing N 351 N sing Y 352 N doub N 353 N sing Y 354 N doub N 355 N sing Y 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N doub N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing DK ACTA CRYSTALLOGR.,SECT.D ABCRE6 0766 0907-4449 62 375 382 10.1107/S0907444906001314 16552138 Structural phase transition of monoclinic crystals of hen egg-white lysozyme 2006 10.2210/pdb2d4j/pdb pdb_00002d4j 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 290 1 Confocal Max-Flux optics CCD 2004-07-30 BRUKER SMART 6000 curved mirror SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE MACSCIENCE 14331.160 Lysozyme C 3.2.1.17 1 nat polymer 62.005 NITRATE ION 4 syn non-polymer 18.015 water 129 nat water 1,4-beta-N-acetylmuramidase C, Allergen Gal d 4, Gal d IV no no KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n chicken Gallus sample 9031 Gallus gallus 1 1.54 20.31 phase transition 4.5 The crystal was created by the dehydration-induced phase transition of a monoclinic crystal obtained from a heavy water solution at pD 4.5, temperature 293K 293 software exptl_crystal_grow chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_site repository Initial release Version format compliance Non-polymer description Version format compliance Refinement description Experimental preparation Data collection Database references Derived calculations Refinement description 1 0 2006-07-11 1 1 2008-04-30 1 2 2011-07-13 1 3 2017-10-11 1 4 2018-01-24 1 5 2023-10-25 _exptl_crystal_grow.pdbx_details _exptl_crystal_grow.temp _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Monoclinic hen egg-white lysozyme crystallized from a heavy water solution at pD 4.5 Monoclinic hen egg-white lysozyme crystallized at pH 7.6, 313K PDBJ Y PDBJ 2005-10-20 REL REL NO3 NITRATE ION DOD water 1XEK PDB ENTRY 1XEK PDB experimental model NO3 201 2 NO3 NO3 201 A NO3 202 2 NO3 NO3 202 A NO3 203 2 NO3 NO3 203 A NO3 204 2 NO3 NO3 204 A HOH 205 3 DOD DOD 205 A HOH 206 3 DOD DOD 206 A HOH 207 3 DOD DOD 207 A HOH 208 3 DOD DOD 208 A HOH 209 3 DOD DOD 209 A HOH 210 3 DOD DOD 210 A HOH 211 3 DOD DOD 211 A HOH 212 3 DOD DOD 212 A HOH 213 3 DOD DOD 213 A HOH 214 3 DOD DOD 214 A HOH 215 3 DOD DOD 215 A HOH 216 3 DOD DOD 216 A HOH 217 3 DOD DOD 217 A HOH 218 3 DOD DOD 218 A HOH 219 3 DOD DOD 219 A HOH 220 3 DOD DOD 220 A HOH 221 3 DOD DOD 221 A HOH 222 3 DOD DOD 222 A HOH 223 3 DOD DOD 223 A HOH 224 3 DOD DOD 224 A HOH 225 3 DOD DOD 225 A HOH 226 3 DOD DOD 226 A HOH 227 3 DOD DOD 227 A HOH 228 3 DOD DOD 228 A HOH 229 3 DOD DOD 229 A HOH 230 3 DOD DOD 230 A HOH 231 3 DOD DOD 231 A HOH 232 3 DOD DOD 232 A HOH 233 3 DOD DOD 233 A HOH 234 3 DOD DOD 234 A HOH 235 3 DOD DOD 235 A HOH 236 3 DOD DOD 236 A HOH 237 3 DOD DOD 237 A HOH 238 3 DOD DOD 238 A HOH 239 3 DOD DOD 239 A HOH 240 3 DOD DOD 240 A HOH 241 3 DOD DOD 241 A HOH 242 3 DOD DOD 242 A HOH 243 3 DOD DOD 243 A HOH 244 3 DOD DOD 244 A HOH 245 3 DOD DOD 245 A HOH 246 3 DOD DOD 246 A HOH 247 3 DOD DOD 247 A HOH 248 3 DOD DOD 248 A HOH 249 3 DOD DOD 249 A HOH 250 3 DOD DOD 250 A HOH 251 3 DOD DOD 251 A HOH 252 3 DOD DOD 252 A HOH 253 3 DOD DOD 253 A HOH 254 3 DOD DOD 254 A HOH 255 3 DOD DOD 255 A HOH 256 3 DOD DOD 256 A HOH 257 3 DOD DOD 257 A HOH 258 3 DOD DOD 258 A HOH 259 3 DOD DOD 259 A HOH 260 3 DOD DOD 260 A HOH 261 3 DOD DOD 261 A HOH 262 3 DOD DOD 262 A HOH 263 3 DOD DOD 263 A HOH 264 3 DOD DOD 264 A HOH 265 3 DOD DOD 265 A HOH 266 3 DOD DOD 266 A HOH 267 3 DOD DOD 267 A HOH 268 3 DOD DOD 268 A HOH 269 3 DOD DOD 269 A HOH 270 3 DOD DOD 270 A HOH 271 3 DOD DOD 271 A HOH 272 3 DOD DOD 272 A HOH 273 3 DOD DOD 273 A HOH 274 3 DOD DOD 274 A HOH 275 3 DOD DOD 275 A HOH 276 3 DOD DOD 276 A HOH 277 3 DOD DOD 277 A HOH 278 3 DOD DOD 278 A HOH 279 3 DOD DOD 279 A HOH 280 3 DOD DOD 280 A HOH 281 3 DOD DOD 281 A HOH 282 3 DOD DOD 282 A HOH 283 3 DOD DOD 283 A HOH 284 3 DOD DOD 284 A HOH 285 3 DOD DOD 285 A HOH 286 3 DOD DOD 286 A HOH 287 3 DOD DOD 287 A HOH 288 3 DOD DOD 288 A HOH 289 3 DOD DOD 289 A HOH 290 3 DOD DOD 290 A HOH 291 3 DOD DOD 291 A HOH 292 3 DOD DOD 292 A HOH 293 3 DOD DOD 293 A HOH 294 3 DOD DOD 294 A HOH 295 3 DOD DOD 295 A HOH 296 3 DOD DOD 296 A HOH 297 3 DOD DOD 297 A HOH 298 3 DOD DOD 298 A HOH 299 3 DOD DOD 299 A HOH 300 3 DOD DOD 300 A HOH 301 3 DOD DOD 301 A HOH 302 3 DOD DOD 302 A HOH 303 3 DOD DOD 303 A HOH 304 3 DOD DOD 304 A HOH 305 3 DOD DOD 305 A HOH 306 3 DOD DOD 306 A HOH 307 3 DOD DOD 307 A HOH 308 3 DOD DOD 308 A HOH 309 3 DOD DOD 309 A HOH 310 3 DOD DOD 310 A HOH 311 3 DOD DOD 311 A HOH 312 3 DOD DOD 312 A HOH 313 3 DOD DOD 313 A HOH 314 3 DOD DOD 314 A HOH 315 3 DOD DOD 315 A HOH 316 3 DOD DOD 316 A HOH 317 3 DOD DOD 317 A HOH 318 3 DOD DOD 318 A HOH 319 3 DOD DOD 319 A HOH 320 3 DOD DOD 320 A HOH 321 3 DOD DOD 321 A HOH 322 3 DOD DOD 322 A HOH 323 3 DOD DOD 323 A HOH 324 3 DOD DOD 324 A HOH 325 3 DOD DOD 325 A HOH 326 3 DOD DOD 326 A HOH 327 3 DOD DOD 327 A HOH 328 3 DOD DOD 328 A HOH 329 3 DOD DOD 329 A HOH 330 3 DOD DOD 330 A HOH 331 3 DOD DOD 331 A HOH 332 3 DOD DOD 332 A HOH 333 3 DOD DOD 333 A LYS 1 n 1 LYS 1 A VAL 2 n 2 VAL 2 A PHE 3 n 3 PHE 3 A GLY 4 n 4 GLY 4 A ARG 5 n 5 ARG 5 A CYS 6 n 6 CYS 6 A GLU 7 n 7 GLU 7 A LEU 8 n 8 LEU 8 A ALA 9 n 9 ALA 9 A ALA 10 n 10 ALA 10 A ALA 11 n 11 ALA 11 A MET 12 n 12 MET 12 A LYS 13 n 13 LYS 13 A ARG 14 n 14 ARG 14 A HIS 15 n 15 HIS 15 A GLY 16 n 16 GLY 16 A LEU 17 n 17 LEU 17 A ASP 18 n 18 ASP 18 A ASN 19 n 19 ASN 19 A TYR 20 n 20 TYR 20 A ARG 21 n 21 ARG 21 A GLY 22 n 22 GLY 22 A TYR 23 n 23 TYR 23 A SER 24 n 24 SER 24 A LEU 25 n 25 LEU 25 A GLY 26 n 26 GLY 26 A ASN 27 n 27 ASN 27 A TRP 28 n 28 TRP 28 A VAL 29 n 29 VAL 29 A CYS 30 n 30 CYS 30 A ALA 31 n 31 ALA 31 A ALA 32 n 32 ALA 32 A LYS 33 n 33 LYS 33 A PHE 34 n 34 PHE 34 A GLU 35 n 35 GLU 35 A SER 36 n 36 SER 36 A ASN 37 n 37 ASN 37 A PHE 38 n 38 PHE 38 A ASN 39 n 39 ASN 39 A THR 40 n 40 THR 40 A GLN 41 n 41 GLN 41 A ALA 42 n 42 ALA 42 A THR 43 n 43 THR 43 A ASN 44 n 44 ASN 44 A ARG 45 n 45 ARG 45 A ASN 46 n 46 ASN 46 A THR 47 n 47 THR 47 A ASP 48 n 48 ASP 48 A GLY 49 n 49 GLY 49 A SER 50 n 50 SER 50 A THR 51 n 51 THR 51 A ASP 52 n 52 ASP 52 A TYR 53 n 53 TYR 53 A GLY 54 n 54 GLY 54 A ILE 55 n 55 ILE 55 A LEU 56 n 56 LEU 56 A GLN 57 n 57 GLN 57 A ILE 58 n 58 ILE 58 A ASN 59 n 59 ASN 59 A SER 60 n 60 SER 60 A ARG 61 n 61 ARG 61 A TRP 62 n 62 TRP 62 A TRP 63 n 63 TRP 63 A CYS 64 n 64 CYS 64 A ASN 65 n 65 ASN 65 A ASP 66 n 66 ASP 66 A GLY 67 n 67 GLY 67 A ARG 68 n 68 ARG 68 A THR 69 n 69 THR 69 A PRO 70 n 70 PRO 70 A GLY 71 n 71 GLY 71 A SER 72 n 72 SER 72 A ARG 73 n 73 ARG 73 A ASN 74 n 74 ASN 74 A LEU 75 n 75 LEU 75 A CYS 76 n 76 CYS 76 A ASN 77 n 77 ASN 77 A ILE 78 n 78 ILE 78 A PRO 79 n 79 PRO 79 A CYS 80 n 80 CYS 80 A SER 81 n 81 SER 81 A ALA 82 n 82 ALA 82 A LEU 83 n 83 LEU 83 A LEU 84 n 84 LEU 84 A SER 85 n 85 SER 85 A SER 86 n 86 SER 86 A ASP 87 n 87 ASP 87 A ILE 88 n 88 ILE 88 A THR 89 n 89 THR 89 A ALA 90 n 90 ALA 90 A SER 91 n 91 SER 91 A VAL 92 n 92 VAL 92 A ASN 93 n 93 ASN 93 A CYS 94 n 94 CYS 94 A ALA 95 n 95 ALA 95 A LYS 96 n 96 LYS 96 A LYS 97 n 97 LYS 97 A ILE 98 n 98 ILE 98 A VAL 99 n 99 VAL 99 A SER 100 n 100 SER 100 A ASP 101 n 101 ASP 101 A GLY 102 n 102 GLY 102 A ASN 103 n 103 ASN 103 A GLY 104 n 104 GLY 104 A MET 105 n 105 MET 105 A ASN 106 n 106 ASN 106 A ALA 107 n 107 ALA 107 A TRP 108 n 108 TRP 108 A VAL 109 n 109 VAL 109 A ALA 110 n 110 ALA 110 A TRP 111 n 111 TRP 111 A ARG 112 n 112 ARG 112 A ASN 113 n 113 ASN 113 A ARG 114 n 114 ARG 114 A CYS 115 n 115 CYS 115 A LYS 116 n 116 LYS 116 A GLY 117 n 117 GLY 117 A THR 118 n 118 THR 118 A ASP 119 n 119 ASP 119 A VAL 120 n 120 VAL 120 A GLN 121 n 121 GLN 121 A ALA 122 n 122 ALA 122 A TRP 123 n 123 TRP 123 A ILE 124 n 124 ILE 124 A ARG 125 n 125 ARG 125 A GLY 126 n 126 GLY 126 A CYS 127 n 127 CYS 127 A ARG 128 n 128 ARG 128 A LEU 129 n 129 LEU 129 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ASN 44 A N ASN 44 A O ASP 52 A O ASP 52 A N TYR 53 A N TYR 53 A O ILE 58 A O ILE 58 1 3.54 0.50 120.30 123.84 A A A NE CZ NH2 ARG ARG ARG 5 5 5 N 1 3.92 0.60 121.00 124.92 A A A CB CG CD2 TYR TYR TYR 20 20 20 N 1 -4.65 0.60 121.00 116.35 A A A CB CG CD1 TYR TYR TYR 20 20 20 N 1 -4.88 0.50 120.30 115.42 A A A NE CZ NH2 ARG ARG ARG 61 61 61 N 1 5.13 0.50 120.30 125.43 A A A NE CZ NH1 ARG ARG ARG 68 68 68 N 1 -4.79 0.50 120.30 115.51 A A A NE CZ NH2 ARG ARG ARG 68 68 68 N 1 -3.67 0.50 120.30 116.63 A A A NE CZ NH2 ARG ARG ARG 112 112 112 N 1 -3.22 0.50 120.30 117.08 A A A NE CZ NH2 ARG ARG ARG 125 125 125 N 1 3.31 0.50 120.30 123.61 A A A NE CZ NH1 ARG ARG ARG 128 128 128 N 1 -3.77 0.50 120.30 116.53 A A A NE CZ NH2 ARG ARG ARG 128 128 128 N 1 A ASN 19 82.09 5.54 The author asigned the Rfree reflections by the following SHELXL97 input command line L.S. 5 -20 which indicates 5 cycles of least-squares calculation and ignore every 20th reflections (5%) in the refinement for the Rfree calculation 0.133 0.097 0.098 1.16 12.3 1261 25218 Random 1 0.0 MOLECULAR REPLACEMENT PDB ENTRY 1XEK SHELX97 default 1.16 12.3 129 1146 16 0 1001 0.012 0.027 0.076 0.030 0.096 0.169 1.22 1.16 12.3 2D4J 30199 25242 0.0 0.0 0.106 1 3.09 83.6 0.299 1.16 1.20 1 52.8 data reduction SaintPLus model building X-PLOR refinement SHELXL-97 data reduction SMART V. 6000 data scaling SAINTPLUS phasing X-PLOR Transformed monoclinic crystal of hen egg-white lysozyme from a heavy water solution 1 N N 2 N N 2 N N 2 N N 2 N N 3 N N The biological assembly is a molecule in the asymmetric unit. A GLY 4 A GLY 4 HELX_P A HIS 15 A HIS 15 1 1 12 A ASN 19 A ASN 19 HELX_P A TYR 23 A TYR 23 5 2 5 A SER 24 A SER 24 HELX_P A ASN 37 A ASN 37 1 3 14 A PRO 79 A PRO 79 HELX_P A SER 85 A SER 85 5 4 7 A ILE 88 A ILE 88 HELX_P A SER 100 A SER 100 1 5 13 A ASN 103 A ASN 103 HELX_P A ALA 107 A ALA 107 5 6 5 A TRP 108 A TRP 108 HELX_P A CYS 115 A CYS 115 1 7 8 A ASP 119 A ASP 119 HELX_P A ARG 125 A ARG 125 5 8 7 disulf 2.021 A CYS 6 A SG CYS 6 1_555 A CYS 127 A SG CYS 127 1_555 disulf 2.047 A CYS 30 A SG CYS 30 1_555 A CYS 115 A SG CYS 115 1_555 disulf 2.040 A CYS 64 A SG CYS 64 1_555 A CYS 80 A SG CYS 80 1_555 disulf 2.013 A CYS 76 A SG CYS 76 1_555 A CYS 94 A SG CYS 94 1_555 HYDROLASE phase transition, rigid-body motion, TLS analysis, HYDROLASE LYSC_CHICK UNP 1 19 P00698 19 147 2D4J 1 129 P00698 A 1 1 129 3 anti-parallel anti-parallel A THR 43 A THR 43 A ARG 45 A ARG 45 A THR 51 A THR 51 A TYR 53 A TYR 53 A ILE 58 A ILE 58 A ASN 59 A ASN 59 BINDING SITE FOR RESIDUE NO3 A 201 A NO3 201 Software 5 BINDING SITE FOR RESIDUE NO3 A 202 A NO3 202 Software 3 BINDING SITE FOR RESIDUE NO3 A 203 A NO3 203 Software 6 BINDING SITE FOR RESIDUE NO3 A 204 A NO3 204 Software 4 A GLY 4 A GLY 4 5 1_555 A ARG 5 A ARG 5 5 1_555 A CYS 6 A CYS 6 5 1_555 A GLU 7 A GLU 7 5 1_555 A DOD 289 F DOD 5 1_555 A ALA 11 A ALA 11 3 1_555 A ARG 14 A ARG 14 3 1_555 A HIS 15 A HIS 15 3 1_555 A ASN 59 A ASN 59 6 1_555 A TRP 63 A TRP 63 6 1_555 A ALA 107 A ALA 107 6 1_555 A DOD 213 F DOD 6 1_555 A DOD 291 F DOD 6 1_555 A DOD 293 F DOD 6 1_555 A ARG 5 A ARG 5 4 1_555 A LYS 33 A LYS 33 4 1_555 A TRP 123 A TRP 123 4 1_555 A ARG 125 A ARG 125 4 1_555 4 P 1 21 1