5.49
19.319
18.024
18.164
A
O5'
DC
1
ATOM
A
O5'
DC
1
1
1.00
1
O
4.80
19.563
17.046
19.216
A
C5'
DC
1
ATOM
A
C5'
DC
1
1
1.00
1
C
4.34
18.470
16.043
19.312
A
C4'
DC
1
ATOM
A
C4'
DC
1
1
1.00
1
C
4.48
17.291
16.727
19.813
A
O4'
DC
1
ATOM
A
O4'
DC
1
1
1.00
1
O
4.17
18.000
15.395
17.961
A
C3'
DC
1
ATOM
A
C3'
DC
1
1
1.00
1
C
5.45
17.668
14.009
18.278
A
O3'
DC
1
ATOM
A
O3'
DC
1
1
1.00
1
O
4.24
16.748
16.083
17.551
A
C2'
DC
1
ATOM
A
C2'
DC
1
1
1.00
1
C
5.04
16.174
16.455
18.959
A
C1'
DC
1
ATOM
A
C1'
DC
1
1
1.00
1
C
5.02
15.342
17.707
18.967
A
N1
DC
1
ATOM
A
N1
DC
1
1
1.00
1
N
5.59
14.003
17.545
18.761
A
C2
DC
1
ATOM
A
C2
DC
1
1
1.00
1
C
5.83
13.471
16.455
18.614
A
O2
DC
1
ATOM
A
O2
DC
1
1
1.00
1
O
4.59
13.237
18.687
18.768
A
N3
DC
1
ATOM
A
N3
DC
1
1
1.00
1
N
5.00
13.769
19.898
18.849
A
C4
DC
1
ATOM
A
C4
DC
1
1
1.00
1
C
5.55
13.008
20.991
18.884
A
N4
DC
1
ATOM
A
N4
DC
1
1
1.00
1
N
6.09
15.242
20.072
19.020
A
C5
DC
1
ATOM
A
C5
DC
1
1
1.00
1
C
5.03
15.918
18.932
19.109
A
C6
DC
1
ATOM
A
C6
DC
1
1
1.00
1
C
5.20
18.701
12.785
18.153
A
P
DG
2
ATOM
A
P
DG
1
2
1.00
1
P
6.28
19.630
13.010
17.024
A
OP1
DG
2
ATOM
A
OP1
DG
1
2
1.00
1
O
8.06
17.877
11.578
18.167
A
OP2
DG
2
ATOM
A
OP2
DG
1
2
1.00
1
O
5.04
19.558
12.865
19.468
A
O5'
DG
2
ATOM
A
O5'
DG
1
2
1.00
1
O
4.86
18.987
12.690
20.757
A
C5'
DG
2
ATOM
A
C5'
DG
1
2
1.00
1
C
4.77
20.110
13.003
21.735
A
C4'
DG
2
ATOM
A
C4'
DG
1
2
1.00
1
C
5.30
20.450
14.400
21.568
A
O4'
DG
2
ATOM
A
O4'
DG
1
2
1.00
1
O
5.44
19.548
12.986
23.183
A
C3'
DG
2
ATOM
A
C3'
DG
1
2
1.00
1
C
6.33
19.788
11.653
23.676
A
O3'
DG
2
ATOM
A
O3'
DG
1
2
1.00
1
O
6.49
20.410
13.996
23.870
A
C2'
DG
2
ATOM
A
C2'
DG
1
2
1.00
1
C
5.49
20.789
15.056
22.828
A
C1'
DG
2
ATOM
A
C1'
DG
1
2
1.00
1
C
5.72
20.074
16.253
22.886
A
N9
DG
2
ATOM
A
N9
DG
1
2
1.00
1
N
5.98
20.667
17.492
22.865
A
C8
DG
2
ATOM
A
C8
DG
1
2
1.00
1
C
6.39
19.792
18.510
22.821
A
N7
DG
2
ATOM
A
N7
DG
1
2
1.00
1
N
5.54
18.591
17.862
22.738
A
C5
DG
2
ATOM
A
C5
DG
1
2
1.00
1
C
5.59
17.250
18.408
22.689
A
C6
DG
2
ATOM
A
C6
DG
1
2
1.00
1
C
6.06
16.944
19.632
22.574
A
O6
DG
2
ATOM
A
O6
DG
1
2
1.00
1
O
4.46
16.263
17.472
22.623
A
N1
DG
2
ATOM
A
N1
DG
1
2
1.00
1
N
4.44
16.520
16.128
22.656
A
C2
DG
2
ATOM
A
C2
DG
1
2
1.00
1
C
5.21
15.443
15.365
22.605
A
N2
DG
2
ATOM
A
N2
DG
1
2
1.00
1
N
4.73
17.735
15.576
22.782
A
N3
DG
2
ATOM
A
N3
DG
1
2
1.00
1
N
4.69
18.701
16.501
22.813
A
C4
DG
2
ATOM
A
C4
DG
1
2
1.00
1
C
7.33
18.587
10.684
24.163
A
P
DC
3
ATOM
A
P
DC
1
3
1.00
1
P
9.44
19.247
9.416
24.623
A
OP1
DC
3
ATOM
A
OP1
DC
1
3
1.00
1
O
9.85
17.559
10.664
23.180
A
OP2
DC
3
ATOM
A
OP2
DC
1
3
1.00
1
O
6.53
18.084
11.489
25.438
A
O5'
DC
3
ATOM
A
O5'
DC
1
3
1.00
1
O
5.49
17.616
10.777
26.620
A
C5'
DC
3
ATOM
A
C5'
DC
1
3
1.00
1
C
4.89
16.184
11.282
26.968
A
C4'
DC
3
ATOM
A
C4'
DC
1
3
1.00
1
C
4.80
16.299
12.666
27.387
A
O4'
DC
3
ATOM
A
O4'
DC
1
3
1.00
1
O
5.67
15.208
11.272
25.744
A
C3'
DC
3
ATOM
A
C3'
DC
1
3
1.00
1
C
6.35
13.864
11.094
26.333
A
O3'
DC
3
ATOM
A
O3'
DC
1
3
1.00
1
O
4.73
15.136
12.760
25.275
A
C2'
DC
3
ATOM
A
C2'
DC
1
3
1.00
1
C
5.13
15.408
13.473
26.730
A
C1'
DC
3
ATOM
A
C1'
DC
1
3
1.00
1
C
5.08
16.063
14.754
26.511
A
N1
DC
3
ATOM
A
N1
DC
1
3
1.00
1
N
6.10
15.215
15.887
26.302
A
C2
DC
3
ATOM
A
C2
DC
1
3
1.00
1
C
6.07
13.989
15.729
26.230
A
O2
DC
3
ATOM
A
O2
DC
1
3
1.00
1
O
5.05
15.763
17.121
26.145
A
N3
DC
3
ATOM
A
N3
DC
1
3
1.00
1
N
4.57
17.136
17.298
26.117
A
C4
DC
3
ATOM
A
C4
DC
1
3
1.00
1
C
5.88
17.588
18.533
25.971
A
N4
DC
3
ATOM
A
N4
DC
1
3
1.00
1
N
5.13
17.969
16.132
26.275
A
C5
DC
3
ATOM
A
C5
DC
1
3
1.00
1
C
4.76
17.423
14.948
26.493
A
C6
DC
3
ATOM
A
C6
DC
1
3
1.00
1
C
7.80
13.176
9.653
26.276
A
P
DG
4
ATOM
A
P
DG
1
4
1.00
1
P
9.22
13.460
9.024
25.100
A
OP1
DG
4
ATOM
A
OP1
DG
1
4
1.00
1
O
11.86
11.769
9.996
26.756
A
OP2
DG
4
ATOM
A
OP2
DG
1
4
1.00
1
O
5.18
13.936
8.773
27.408
A
O5'
DG
4
ATOM
A
O5'
DG
1
4
1.00
1
O
4.86
13.694
9.101
28.739
A
C5'
DG
4
ATOM
A
C5'
DG
1
4
1.00
1
C
4.32
14.687
8.254
29.568
A
C4'
DG
4
ATOM
A
C4'
DG
1
4
1.00
1
C
4.43
16.038
8.693
29.194
A
O4'
DG
4
ATOM
A
O4'
DG
1
4
1.00
1
O
3.45
14.596
8.541
31.083
A
C3'
DG
4
ATOM
A
C3'
DG
1
4
1.00
1
C
3.74
13.727
7.552
31.573
A
O3'
DG
4
ATOM
A
O3'
DG
1
4
1.00
1
O
4.88
16.082
8.376
31.553
A
C2'
DG
4
ATOM
A
C2'
DG
1
4
1.00
1
C
4.17
16.957
8.684
30.354
A
C1'
DG
4
ATOM
A
C1'
DG
1
4
1.00
1
C
4.04
17.606
9.965
30.367
A
N9
DG
4
ATOM
A
N9
DG
1
4
1.00
1
N
4.91
18.956
10.108
30.256
A
C8
DG
4
ATOM
A
C8
DG
1
4
1.00
1
C
5.14
19.294
11.349
30.246
A
N7
DG
4
ATOM
A
N7
DG
1
4
1.00
1
N
4.25
18.126
12.049
30.281
A
C5
DG
4
ATOM
A
C5
DG
1
4
1.00
1
C
4.80
17.905
13.458
30.249
A
C6
DG
4
ATOM
A
C6
DG
1
4
1.00
1
C
5.76
18.812
14.323
30.128
A
O6
DG
4
ATOM
A
O6
DG
1
4
1.00
1
O
4.81
16.579
13.808
30.233
A
N1
DG
4
ATOM
A
N1
DG
1
4
1.00
1
N
4.47
15.569
12.908
30.278
A
C2
DG
4
ATOM
A
C2
DG
1
4
1.00
1
C
4.63
14.334
13.369
30.286
A
N2
DG
4
ATOM
A
N2
DG
1
4
1.00
1
N
4.57
15.742
11.559
30.350
A
N3
DG
4
ATOM
A
N3
DG
1
4
1.00
1
N
3.85
17.035
11.255
30.337
A
C4
DG
4
ATOM
A
C4
DG
1
4
1.00
1
C
4.19
13.310
7.469
33.101
A
P
DC
5
ATOM
A
P
DC
1
5
1.00
1
P
5.65
14.446
7.438
34.007
A
OP1
DC
5
ATOM
A
OP1
DC
1
5
1.00
1
O
5.98
12.340
6.355
33.193
A
OP2
DC
5
ATOM
A
OP2
DC
1
5
1.00
1
O
3.71
12.487
8.859
33.244
A
O5'
DC
5
ATOM
A
O5'
DC
1
5
1.00
1
O
3.62
11.736
9.044
34.451
A
C5'
DC
5
ATOM
A
C5'
DC
1
5
1.00
1
C
3.55
11.327
10.542
34.500
A
C4'
DC
5
ATOM
A
C4'
DC
1
5
1.00
1
C
3.73
12.467
11.332
34.899
A
O4'
DC
5
ATOM
A
O4'
DC
1
5
1.00
1
O
3.86
10.839
11.103
33.147
A
C3'
DC
5
ATOM
A
C3'
DC
1
5
1.00
1
C
4.47
9.742
12.020
33.347
A
O3'
DC
5
ATOM
A
O3'
DC
1
5
1.00
1
O
3.93
12.036
11.904
32.559
A
C2'
DC
5
ATOM
A
C2'
DC
1
5
1.00
1
C
3.57
12.659
12.377
33.970
A
C1'
DC
5
ATOM
A
C1'
DC
1
5
1.00
1
C
4.25
14.111
12.544
33.883
A
N1
DC
5
ATOM
A
N1
DC
1
5
1.00
1
N
4.00
14.629
13.837
33.693
A
C2
DC
5
ATOM
A
C2
DC
1
5
1.00
1
C
4.55
13.875
14.828
33.593
A
O2
DC
5
ATOM
A
O2
DC
1
5
1.00
1
O
4.30
15.966
14.016
33.605
A
N3
DC
5
ATOM
A
N3
DC
1
5
1.00
1
N
4.27
16.807
12.940
33.705
A
C4
DC
5
ATOM
A
C4
DC
1
5
1.00
1
C
4.28
18.141
13.160
33.607
A
N4
DC
5
ATOM
A
N4
DC
1
5
1.00
1
N
4.30
16.283
11.612
33.850
A
C5
DC
5
ATOM
A
C5
DC
1
5
1.00
1
C
4.81
14.986
11.452
33.971
A
C6
DC
5
ATOM
A
C6
DC
1
5
1.00
1
C
4.38
8.219
11.502
33.267
A
P
DG
6
ATOM
A
P
DG
1
6
1.00
1
P
5.35
8.033
10.540
32.173
A
OP1
DG
6
ATOM
A
OP1
DG
1
6
1.00
1
O
5.92
7.408
12.711
33.299
A
OP2
DG
6
ATOM
A
OP2
DG
1
6
1.00
1
O
4.51
7.976
10.682
34.632
A
O5'
DG
6
ATOM
A
O5'
DG
1
6
1.00
1
O
4.65
7.823
11.318
35.844
A
C5'
DG
6
ATOM
A
C5'
DG
1
6
1.00
1
C
3.31
7.567
10.215
36.864
A
C4'
DG
6
ATOM
A
C4'
DG
1
6
1.00
1
C
4.08
8.820
9.454
36.981
A
O4'
DG
6
ATOM
A
O4'
DG
1
6
1.00
1
O
4.27
7.382
10.742
38.284
A
C3'
DG
6
ATOM
A
C3'
DG
1
6
1.00
1
C
5.26
6.447
9.838
38.999
A
O3'
DG
6
ATOM
A
O3'
DG
1
6
1.00
1
O
4.63
8.683
10.714
38.953
A
C2'
DG
6
ATOM
A
C2'
DG
1
6
1.00
1
C
4.72
9.371
9.453
38.327
A
C1'
DG
6
ATOM
A
C1'
DG
1
6
1.00
1
C
4.21
10.765
9.503
38.222
A
N9
DG
6
ATOM
A
N9
DG
1
6
1.00
1
N
5.08
11.572
8.424
38.419
A
C8
DG
6
ATOM
A
C8
DG
1
6
1.00
1
C
4.37
12.863
8.685
38.216
A
N7
DG
6
ATOM
A
N7
DG
1
6
1.00
1
N
4.63
12.902
10.038
37.970
A
C5
DG
6
ATOM
A
C5
DG
1
6
1.00
1
C
5.39
14.001
10.900
37.719
A
C6
DG
6
ATOM
A
C6
DG
1
6
1.00
1
C
6.21
15.198
10.606
37.707
A
O6
DG
6
ATOM
A
O6
DG
1
6
1.00
1
O
4.26
13.654
12.245
37.544
A
N1
DG
6
ATOM
A
N1
DG
1
6
1.00
1
N
4.35
12.348
12.672
37.510
A
C2
DG
6
ATOM
A
C2
DG
1
6
1.00
1
C
4.43
12.116
13.922
37.246
A
N2
DG
6
ATOM
A
N2
DG
1
6
1.00
1
N
3.66
11.273
11.892
37.758
A
N3
DG
6
ATOM
A
N3
DG
1
6
1.00
1
N
4.25
11.616
10.576
37.970
A
C4
DG
6
ATOM
A
C4
DG
1
6
1.00
1
C
8.13
19.639
18.753
37.502
B
O5'
DC
7
ATOM
B
O5'
DC
1
1
1.00
1
O
6.01
19.093
19.666
36.532
B
C5'
DC
7
ATOM
B
C5'
DC
1
1
1.00
1
C
4.37
17.571
19.599
36.448
B
C4'
DC
7
ATOM
B
C4'
DC
1
1
1.00
1
C
4.27
17.201
18.295
35.928
B
O4'
DC
7
ATOM
B
O4'
DC
1
1
1.00
1
O
4.91
16.815
19.768
37.798
B
C3'
DC
7
ATOM
B
C3'
DC
1
1
1.00
1
C
4.51
15.571
20.437
37.561
B
O3'
DC
7
ATOM
B
O3'
DC
1
1
1.00
1
O
4.38
16.510
18.364
38.291
B
C2'
DC
7
ATOM
B
C2'
DC
1
1
1.00
1
C
4.02
16.316
17.712
36.836
B
C1'
DC
7
ATOM
B
C1'
DC
1
1
1.00
1
C
4.82
16.636
16.247
36.880
B
N1
DC
7
ATOM
B
N1
DC
1
1
1.00
1
N
4.00
15.582
15.353
36.994
B
C2
DC
7
ATOM
B
C2
DC
1
1
1.00
1
C
4.67
14.391
15.723
37.060
B
O2
DC
7
ATOM
B
O2
DC
1
1
1.00
1
O
3.68
15.901
14.016
37.039
B
N3
DC
7
ATOM
B
N3
DC
1
1
1.00
1
N
4.58
17.180
13.591
37.019
B
C4
DC
7
ATOM
B
C4
DC
1
1
1.00
1
C
4.23
17.451
12.261
37.073
B
N4
DC
7
ATOM
B
N4
DC
1
1
1.00
1
N
4.31
18.273
14.506
36.846
B
C5
DC
7
ATOM
B
C5
DC
1
1
1.00
1
C
4.97
17.948
15.809
36.785
B
C6
DC
7
ATOM
B
C6
DC
1
1
1.00
1
C
4.55
15.448
22.028
37.596
B
P
DG
8
ATOM
B
P
DG
1
2
1.00
1
P
5.83
16.260
22.563
38.676
B
OP1
DG
8
ATOM
B
OP1
DG
1
2
1.00
1
O
5.82
13.999
22.273
37.607
B
OP2
DG
8
ATOM
B
OP2
DG
1
2
1.00
1
O
3.90
16.053
22.536
36.192
B
O5'
DG
8
ATOM
B
O5'
DG
1
2
1.00
1
O
4.13
15.453
22.137
35.001
B
C5'
DG
8
ATOM
B
C5'
DG
1
2
1.00
1
C
4.08
16.304
22.606
33.880
B
C4'
DG
8
ATOM
B
C4'
DG
1
2
1.00
1
C
4.84
17.602
22.011
33.972
B
O4'
DG
8
ATOM
B
O4'
DG
1
2
1.00
1
O
4.94
15.774
22.082
32.504
B
C3'
DG
8
ATOM
B
C3'
DG
1
2
1.00
1
C
4.20
14.923
23.167
31.954
B
O3'
DG
8
ATOM
B
O3'
DG
1
2
1.00
1
O
4.98
17.032
21.942
31.620
B
C2'
DG
8
ATOM
B
C2'
DG
1
2
1.00
1
C
4.01
18.113
21.685
32.635
B
C1'
DG
8
ATOM
B
C1'
DG
1
2
1.00
1
C
4.00
18.640
20.305
32.737
B
N9
DG
8
ATOM
B
N9
DG
1
2
1.00
1
N
5.10
19.941
19.973
32.725
B
C8
DG
8
ATOM
B
C8
DG
1
2
1.00
1
C
5.07
20.123
18.676
32.863
B
N7
DG
8
ATOM
B
N7
DG
1
2
1.00
1
N
4.38
18.832
18.167
32.948
B
C5
DG
8
ATOM
B
C5
DG
1
2
1.00
1
C
4.42
18.380
16.818
33.168
B
C6
DG
8
ATOM
B
C6
DG
1
2
1.00
1
C
5.32
19.107
15.765
33.278
B
O6
DG
8
ATOM
B
O6
DG
1
2
1.00
1
O
4.37
17.019
16.744
33.253
B
N1
DG
8
ATOM
B
N1
DG
1
2
1.00
1
N
3.48
16.148
17.773
33.138
B
C2
DG
8
ATOM
B
C2
DG
1
2
1.00
1
C
4.13
14.893
17.555
33.291
B
N2
DG
8
ATOM
B
N2
DG
1
2
1.00
1
N
3.51
16.565
19.028
32.968
B
N3
DG
8
ATOM
B
N3
DG
1
2
1.00
1
N
3.93
17.898
19.145
32.905
B
C4
DG
8
ATOM
B
C4
DG
1
2
1.00
1
C
4.07
13.382
22.928
31.745
B
P
DC
9
ATOM
B
P
DC
1
3
1.00
1
P
3.89
12.829
24.269
31.454
B
OP1
DC
9
ATOM
B
OP1
DC
1
3
1.00
1
O
5.83
12.824
22.236
32.912
B
OP2
DC
9
ATOM
B
OP2
DC
1
3
1.00
1
O
5.13
13.339
22.000
30.504
B
O5'
DC
9
ATOM
B
O5'
DC
1
3
1.00
1
O
4.56
12.397
22.113
29.463
B
C5'
DC
9
ATOM
B
C5'
DC
1
3
1.00
1
C
4.60
11.815
20.737
29.078
B
C4'
DC
9
ATOM
B
C4'
DC
1
3
1.00
1
C
4.12
12.880
19.913
28.549
B
O4'
DC
9
ATOM
B
O4'
DC
1
3
1.00
1
O
4.10
11.201
19.996
30.362
B
C3'
DC
9
ATOM
B
C3'
DC
1
3
1.00
1
C
4.47
10.127
19.211
29.864
B
O3'
DC
9
ATOM
B
O3'
DC
1
3
1.00
1
O
3.89
12.361
19.005
30.727
B
C2'
DC
9
ATOM
B
C2'
DC
1
3
1.00
1
C
4.99
12.962
18.676
29.279
B
C1'
DC
9
ATOM
B
C1'
DC
1
3
1.00
1
C
4.68
14.396
18.337
29.380
B
N1
DC
9
ATOM
B
N1
DC
1
3
1.00
1
N
5.04
14.700
16.966
29.658
B
C2
DC
9
ATOM
B
C2
DC
1
3
1.00
1
C
4.66
13.777
16.167
29.737
B
O2
DC
9
ATOM
B
O2
DC
1
3
1.00
1
O
5.36
16.011
16.619
29.758
B
N3
DC
9
ATOM
B
N3
DC
1
3
1.00
1
N
5.09
17.027
17.515
29.570
B
C4
DC
9
ATOM
B
C4
DC
1
3
1.00
1
C
4.73
18.284
17.133
29.716
B
N4
DC
9
ATOM
B
N4
DC
1
3
1.00
1
N
6.03
16.697
18.912
29.342
B
C5
DC
9
ATOM
B
C5
DC
1
3
1.00
1
C
5.75
15.402
19.270
29.291
B
C6
DC
9
ATOM
B
C6
DC
1
3
1.00
1
C
4.95
8.617
19.725
29.943
B
P
DG
10
ATOM
B
P
DG
1
4
1.00
1
P
5.22
8.381
20.531
31.159
B
OP1
DG
10
ATOM
B
OP1
DG
1
4
1.00
1
O
7.50
7.785
18.590
29.618
B
OP2
DG
10
ATOM
B
OP2
DG
1
4
1.00
1
O
5.00
8.479
20.752
28.701
B
O5'
DG
10
ATOM
B
O5'
DG
1
4
1.00
1
O
4.51
8.624
20.207
27.361
B
C5'
DG
10
ATOM
B
C5'
DG
1
4
1.00
1
C
5.49
8.414
21.398
26.428
B
C4'
DG
10
ATOM
B
C4'
DG
1
4
1.00
1
C
5.25
9.516
22.342
26.665
B
O4'
DG
10
ATOM
B
O4'
DG
1
4
1.00
1
O
5.03
8.575
20.926
24.919
B
C3'
DG
10
ATOM
B
C3'
DG
1
4
1.00
1
C
5.94
7.278
20.819
24.408
B
O3'
DG
10
ATOM
B
O3'
DG
1
4
1.00
1
O
5.09
9.301
22.010
24.262
B
C2'
DG
10
ATOM
B
C2'
DG
1
4
1.00
1
C
5.44
10.076
22.743
25.391
B
C1'
DG
10
ATOM
B
C1'
DG
1
4
1.00
1
C
4.95
11.468
22.505
25.448
B
N9
DG
10
ATOM
B
N9
DG
1
4
1.00
1
N
4.95
12.464
23.438
25.508
B
C8
DG
10
ATOM
B
C8
DG
1
4
1.00
1
C
5.60
13.707
22.947
25.654
B
N7
DG
10
ATOM
B
N7
DG
1
4
1.00
1
N
4.74
13.477
21.602
25.646
B
C5
DG
10
ATOM
B
C5
DG
1
4
1.00
1
C
5.51
14.449
20.549
25.778
B
C6
DG
10
ATOM
B
C6
DG
1
4
1.00
1
C
6.00
15.692
20.678
25.872
B
O6
DG
10
ATOM
B
O6
DG
1
4
1.00
1
O
4.68
13.865
19.310
25.695
B
N1
DG
10
ATOM
B
N1
DG
1
4
1.00
1
N
4.42
12.498
19.112
25.648
B
C2
DG
10
ATOM
B
C2
DG
1
4
1.00
1
C
5.50
12.087
17.891
25.668
B
N2
DG
10
ATOM
B
N2
DG
1
4
1.00
1
N
4.03
11.593
20.050
25.571
B
N3
DG
10
ATOM
B
N3
DG
1
4
1.00
1
N
4.85
12.169
21.301
25.569
B
C4
DG
10
ATOM
B
C4
DG
1
4
1.00
1
C
6.85
6.639
19.390
24.010
B
P
DC
11
ATOM
B
P
DC
1
5
1.00
1
P
7.03
5.269
19.697
23.528
B
OP1
DC
11
ATOM
B
OP1
DC
1
5
1.00
1
O
9.04
6.832
18.422
25.059
B
OP2
DC
11
ATOM
B
OP2
DC
1
5
1.00
1
O
8.43
7.535
19.077
22.726
B
O5'
DC
11
ATOM
B
O5'
DC
1
5
1.00
1
O
6.52
7.066
18.328
21.549
B
C5'
DC
11
ATOM
B
C5'
DC
1
5
1.00
1
C
5.32
7.953
17.122
21.262
B
C4'
DC
11
ATOM
B
C4'
DC
1
5
1.00
1
C
4.93
9.233
17.634
20.874
B
O4'
DC
11
ATOM
B
O4'
DC
1
5
1.00
1
O
5.90
8.225
16.197
22.512
B
C3'
DC
11
ATOM
B
C3'
DC
1
5
1.00
1
C
6.86
8.244
14.845
22.002
B
O3'
DC
11
ATOM
B
O3'
DC
1
5
1.00
1
O
5.85
9.624
16.594
23.001
B
C2'
DC
11
ATOM
B
C2'
DC
1
5
1.00
1
C
5.47
10.232
16.950
21.601
B
C1'
DC
11
ATOM
B
C1'
DC
1
5
1.00
1
C
4.28
11.299
18.048
21.834
B
N1
DC
11
ATOM
B
N1
DC
1
5
1.00
1
N
5.17
12.590
17.596
22.055
B
C2
DC
11
ATOM
B
C2
DC
1
5
1.00
1
C
5.98
12.797
16.376
22.125
B
O2
DC
11
ATOM
B
O2
DC
1
5
1.00
1
O
5.01
13.587
18.505
22.251
B
N3
DC
11
ATOM
B
N3
DC
1
5
1.00
1
N
4.60
13.310
19.821
22.215
B
C4
DC
11
ATOM
B
C4
DC
1
5
1.00
1
C
5.26
14.350
20.669
22.420
B
N4
DC
11
ATOM
B
N4
DC
1
5
1.00
1
N
5.37
11.964
20.303
22.024
B
C5
DC
11
ATOM
B
C5
DC
1
5
1.00
1
C
6.07
11.026
19.359
21.781
B
C6
DC
11
ATOM
B
C6
DC
1
5
1.00
1
C
6.81
6.938
13.912
22.096
B
P
DG
12
ATOM
B
P
DG
1
6
1.00
1
P
8.23
6.377
14.086
23.419
B
OP1
DG
12
ATOM
B
OP1
DG
1
6
1.00
1
O
9.34
7.337
12.576
21.583
B
OP2
DG
12
ATOM
B
OP2
DG
1
6
1.00
1
O
6.03
5.900
14.522
21.010
B
O5'
DG
12
ATOM
B
O5'
DG
1
6
1.00
1
O
4.88
6.079
14.234
19.674
B
C5'
DG
12
ATOM
B
C5'
DG
1
6
1.00
1
C
5.70
4.988
15.055
18.961
B
C4'
DG
12
ATOM
B
C4'
DG
1
6
1.00
1
C
4.69
5.265
16.407
19.052
B
O4'
DG
12
ATOM
B
O4'
DG
1
6
1.00
1
O
4.94
4.911
14.749
17.372
B
C3'
DG
12
ATOM
B
C3'
DG
1
6
1.00
1
C
5.75
3.590
14.898
16.904
B
O3'
DG
12
ATOM
B
O3'
DG
1
6
1.00
1
O
4.56
5.845
15.762
16.809
B
C2'
DG
12
ATOM
B
C2'
DG
1
6
1.00
1
C
4.97
5.477
16.944
17.660
B
C1'
DG
12
ATOM
B
C1'
DG
1
6
1.00
1
C
5.14
6.459
17.997
17.800
B
N9
DG
12
ATOM
B
N9
DG
1
6
1.00
1
N
5.50
6.156
19.348
17.847
B
C8
DG
12
ATOM
B
C8
DG
1
6
1.00
1
C
4.93
7.161
20.113
18.053
B
N7
DG
12
ATOM
B
N7
DG
1
6
1.00
1
N
4.16
8.279
19.216
18.045
B
C5
DG
12
ATOM
B
C5
DG
1
6
1.00
1
C
4.39
9.624
19.441
18.252
B
C6
DG
12
ATOM
B
C6
DG
1
6
1.00
1
C
5.38
10.197
20.563
18.430
B
O6
DG
12
ATOM
B
O6
DG
1
6
1.00
1
O
4.36
10.413
18.318
18.206
B
N1
DG
12
ATOM
B
N1
DG
1
6
1.00
1
N
4.99
9.889
17.059
18.119
B
C2
DG
12
ATOM
B
C2
DG
1
6
1.00
1
C
4.55
10.694
16.039
18.154
B
N2
DG
12
ATOM
B
N2
DG
1
6
1.00
1
N
4.04
8.555
16.828
17.986
B
N3
DG
12
ATOM
B
N3
DG
1
6
1.00
1
N
4.50
7.861
17.948
17.930
B
C4
DG
12
ATOM
B
C4
DG
1
6
1.00
1
C
8.51
14.538
7.131
38.333
A
MG
MG
13
HETATM
C
MG
MG
2
1.00
1
MG
5.46
7.342
7.804
32.892
A
N1
SPM
14
HETATM
D
N1
SPM
3
1.00
1
N
6.49
8.021
6.904
31.843
A
C2
SPM
14
HETATM
D
C2
SPM
3
1.00
1
C
7.13
9.417
7.435
31.671
A
C3
SPM
14
HETATM
D
C3
SPM
3
1.00
1
C
8.55
10.258
6.666
30.635
A
C4
SPM
14
HETATM
D
C4
SPM
3
1.00
1
C
7.58
10.742
5.364
31.176
A
N5
SPM
14
HETATM
D
N5
SPM
3
1.00
1
N
12.06
11.784
4.746
30.196
A
C6
SPM
14
HETATM
D
C6
SPM
3
1.00
1
C
13.59
11.829
3.223
30.686
A
C7
SPM
14
HETATM
D
C7
SPM
3
1.00
1
C
12.85
12.601
3.148
31.762
A
C8
SPM
14
HETATM
D
C8
SPM
3
1.00
1
C
14.62
12.837
1.508
31.782
A
C9
SPM
14
HETATM
D
C9
SPM
3
1.00
1
C
14.19
13.109
1.367
33.334
A
N10
SPM
14
HETATM
D
N10
SPM
3
1.00
1
N
16.59
13.473
-0.085
33.819
A
C11
SPM
14
HETATM
D
C11
SPM
3
1.00
1
C
17.46
13.765
0.043
35.436
A
C12
SPM
14
HETATM
D
C12
SPM
3
1.00
1
C
20.42
13.412
-1.339
35.964
A
C13
SPM
14
HETATM
D
C13
SPM
3
1.00
1
C
21.43
14.382
-2.307
35.323
A
N14
SPM
14
HETATM
D
N14
SPM
3
1.00
1
N
12.34
21.118
20.477
25.016
B
N1
SPM
15
HETATM
E
N1
SPM
3
1.00
1
N
18.52
19.794
20.996
24.717
B
C2
SPM
15
HETATM
E
C2
SPM
3
1.00
1
C
11.97
18.424
21.314
24.327
B
C3
SPM
15
HETATM
E
C3
SPM
3
1.00
1
C
18.05
17.346
22.236
24.156
B
C4
SPM
15
HETATM
E
C4
SPM
3
1.00
1
C
20.28
16.049
23.077
23.670
B
N5
SPM
15
HETATM
E
N5
SPM
3
1.00
1
N
15.52
15.776
24.542
24.771
B
C6
SPM
15
HETATM
E
C6
SPM
3
1.00
1
C
19.78
15.146
25.381
23.636
B
C7
SPM
15
HETATM
E
C7
SPM
3
1.00
1
C
16.63
13.843
26.200
23.648
B
C8
SPM
15
HETATM
E
C8
SPM
3
1.00
1
C
19.57
12.699
26.548
22.856
B
C9
SPM
15
HETATM
E
C9
SPM
3
1.00
1
C
20.27
11.247
26.140
23.050
B
N10
SPM
15
HETATM
E
N10
SPM
3
1.00
1
N
21.19
10.960
24.617
22.607
B
C11
SPM
15
HETATM
E
C11
SPM
3
1.00
1
C
16.44
10.994
23.657
21.735
B
C12
SPM
15
HETATM
E
C12
SPM
3
1.00
1
C
18.41
11.157
23.689
20.132
B
C13
SPM
15
HETATM
E
C13
SPM
3
1.00
1
C
16.28
9.721
22.923
19.560
B
N14
SPM
15
HETATM
E
N14
SPM
3
1.00
1
N
11.71
16.133
5.685
38.465
A
O
HOH
16
HETATM
F
O
HOH
4
1.00
1
O
10.80
13.213
5.709
37.508
A
O
HOH
17
HETATM
F
O
HOH
4
1.00
1
O
9.22
15.877
8.453
39.199
A
O
HOH
18
HETATM
F
O
HOH
4
1.00
1
O
11.43
15.245
7.829
36.363
A
O
HOH
19
HETATM
F
O
HOH
4
1.00
1
O
13.51
13.678
6.525
40.193
A
O
HOH
20
HETATM
F
O
HOH
4
1.00
1
O
24.04
11.747
14.726
27.978
A
O
HOH
22
HETATM
F
O
HOH
4
1.00
1
O
13.26
11.686
12.219
29.053
A
O
HOH
24
HETATM
F
O
HOH
4
1.00
1
O
9.79
9.258
3.932
33.091
A
O
HOH
26
HETATM
F
O
HOH
4
1.00
1
O
6.31
22.868
4.003
32.797
A
O
HOH
28
HETATM
F
O
HOH
4
1.00
1
O
7.05
23.360
4.446
30.144
A
O
HOH
31
HETATM
F
O
HOH
4
1.00
1
O
10.63
11.386
15.637
32.631
A
O
HOH
33
HETATM
F
O
HOH
4
1.00
1
O
8.44
24.916
2.144
32.815
A
O
HOH
34
HETATM
F
O
HOH
4
1.00
1
O
11.41
25.485
1.684
30.200
A
O
HOH
35
HETATM
F
O
HOH
4
1.00
1
O
14.73
22.833
8.677
30.878
A
O
HOH
36
HETATM
F
O
HOH
4
1.00
1
O
9.90
17.048
6.847
27.155
A
O
HOH
40
HETATM
F
O
HOH
4
1.00
1
O
17.89
20.511
8.981
26.856
A
O
HOH
41
HETATM
F
O
HOH
4
1.00
1
O
7.81
24.558
3.460
22.598
A
O
HOH
44
HETATM
F
O
HOH
4
1.00
1
O
21.77
21.144
1.997
23.976
A
O
HOH
46
HETATM
F
O
HOH
4
1.00
1
O
26.51
12.063
14.304
24.379
A
O
HOH
47
HETATM
F
O
HOH
4
1.00
1
O
24.99
16.094
7.416
24.556
A
O
HOH
48
HETATM
F
O
HOH
4
1.00
1
O
26.83
12.235
6.497
24.542
A
O
HOH
49
HETATM
F
O
HOH
4
1.00
1
O
16.44
12.286
8.017
41.917
A
O
HOH
50
HETATM
F
O
HOH
4
1.00
1
O
11.95
24.334
4.033
25.299
A
O
HOH
51
HETATM
F
O
HOH
4
1.00
1
O
21.75
18.642
2.652
24.981
A
O
HOH
52
HETATM
F
O
HOH
4
1.00
1
O
14.65
22.626
2.007
26.372
A
O
HOH
54
HETATM
F
O
HOH
4
1.00
1
O
22.97
12.720
5.014
27.008
A
O
HOH
57
HETATM
F
O
HOH
4
1.00
1
O
37.50
16.345
4.550
26.404
A
O
HOH
58
HETATM
F
O
HOH
4
1.00
1
O
12.47
20.364
13.983
27.715
A
O
HOH
60
HETATM
F
O
HOH
4
1.00
1
O
8.53
23.024
1.944
28.899
A
O
HOH
62
HETATM
F
O
HOH
4
1.00
1
O
18.52
26.123
4.453
29.329
A
O
HOH
64
HETATM
F
O
HOH
4
1.00
1
O
34.45
9.204
10.906
29.792
A
O
HOH
66
HETATM
F
O
HOH
4
1.00
1
O
39.77
13.043
10.713
22.396
A
O
HOH
71
HETATM
F
O
HOH
4
1.00
1
O
29.53
18.450
6.977
23.843
A
O
HOH
72
HETATM
F
O
HOH
4
1.00
1
O
31.49
23.282
11.650
24.753
A
O
HOH
73
HETATM
F
O
HOH
4
1.00
1
O
38.83
20.079
5.438
25.343
A
O
HOH
74
HETATM
F
O
HOH
4
1.00
1
O
22.95
21.449
11.556
27.092
A
O
HOH
75
HETATM
F
O
HOH
4
1.00
1
O
28.11
10.120
8.545
27.855
A
O
HOH
76
HETATM
F
O
HOH
4
1.00
1
O
22.74
15.109
4.646
27.719
A
O
HOH
77
HETATM
F
O
HOH
4
1.00
1
O
48.65
23.059
11.244
29.432
A
O
HOH
81
HETATM
F
O
HOH
4
1.00
1
O
39.46
25.516
7.887
27.805
A
O
HOH
82
HETATM
F
O
HOH
4
1.00
1
O
31.18
23.321
6.817
26.843
A
O
HOH
83
HETATM
F
O
HOH
4
1.00
1
O
34.22
9.501
6.534
24.734
A
O
HOH
85
HETATM
F
O
HOH
4
1.00
1
O
39.23
14.418
5.621
23.614
A
O
HOH
86
HETATM
F
O
HOH
4
1.00
1
O
43.96
21.924
8.898
23.495
A
O
HOH
87
HETATM
F
O
HOH
4
1.00
1
O
45.44
25.380
7.112
22.817
A
O
HOH
89
HETATM
F
O
HOH
4
1.00
1
O
7.18
11.258
30.290
28.903
B
O
HOH
21
HETATM
G
O
HOH
4
1.00
1
O
13.96
16.274
24.709
28.198
B
O
HOH
23
HETATM
G
O
HOH
4
1.00
1
O
13.76
13.505
29.577
30.725
B
O
HOH
25
HETATM
G
O
HOH
4
1.00
1
O
8.19
13.679
25.784
33.612
B
O
HOH
27
HETATM
G
O
HOH
4
1.00
1
O
6.52
9.129
23.029
31.638
B
O
HOH
29
HETATM
G
O
HOH
4
1.00
1
O
10.19
23.456
20.337
31.732
B
O
HOH
30
HETATM
G
O
HOH
4
1.00
1
O
12.69
26.598
15.020
33.884
B
O
HOH
32
HETATM
G
O
HOH
4
1.00
1
O
10.95
15.311
27.583
30.133
B
O
HOH
37
HETATM
G
O
HOH
4
1.00
1
O
11.24
8.858
30.744
30.352
B
O
HOH
38
HETATM
G
O
HOH
4
1.00
1
O
8.02
13.813
25.494
29.198
B
O
HOH
39
HETATM
G
O
HOH
4
1.00
1
O
14.43
23.099
16.192
24.995
B
O
HOH
42
HETATM
G
O
HOH
4
1.00
1
O
16.28
26.862
25.753
23.907
B
O
HOH
43
HETATM
G
O
HOH
4
1.00
1
O
20.69
13.434
23.491
21.991
B
O
HOH
45
HETATM
G
O
HOH
4
1.00
1
O
9.13
11.791
27.050
25.572
B
O
HOH
53
HETATM
G
O
HOH
4
1.00
1
O
20.45
20.521
18.290
26.341
B
O
HOH
55
HETATM
G
O
HOH
4
1.00
1
O
10.18
9.173
16.964
26.158
B
O
HOH
56
HETATM
G
O
HOH
4
1.00
1
O
16.40
23.358
19.177
27.791
B
O
HOH
59
HETATM
G
O
HOH
4
1.00
1
O
14.07
17.099
22.044
27.657
B
O
HOH
61
HETATM
G
O
HOH
4
1.00
1
O
13.64
20.369
18.944
28.945
B
O
HOH
63
HETATM
G
O
HOH
4
1.00
1
O
23.16
10.934
15.362
30.318
B
O
HOH
65
HETATM
G
O
HOH
4
1.00
1
O
14.33
17.857
25.057
30.671
B
O
HOH
67
HETATM
G
O
HOH
4
1.00
1
O
20.25
25.292
16.998
32.240
B
O
HOH
68
HETATM
G
O
HOH
4
1.00
1
O
7.47
16.215
26.408
32.609
B
O
HOH
69
HETATM
G
O
HOH
4
1.00
1
O
14.23
13.182
28.500
33.228
B
O
HOH
70
HETATM
G
O
HOH
4
1.00
1
O
16.34
8.917
16.246
28.766
B
O
HOH
78
HETATM
G
O
HOH
4
1.00
1
O
34.98
22.556
18.287
30.705
B
O
HOH
79
HETATM
G
O
HOH
4
1.00
1
O
39.08
25.326
14.104
30.512
B
O
HOH
80
HETATM
G
O
HOH
4
1.00
1
O
34.63
21.516
16.280
27.177
B
O
HOH
84
HETATM
G
O
HOH
4
1.00
1
O
45.74
9.356
10.887
23.182
B
O
HOH
88
HETATM
G
O
HOH
4
1.00
1
O
0.055960
0.000000
0.000000
0.000000
0.031696
0.000000
0.000000
0.000000
0.022432
0.00000
0.00000
0.00000
Wang, A.H.-J.
Quigley, G.J.
Kolpak, F.J.
Crawford, J.L.
Van Boom, J.H.
Van Der Marel, G.A.
Rich, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
17.870
31.550
44.580
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
Mg 2
24.305
MAGNESIUM ION
non-polymer
C10 H26 N4
202.340
SPERMINE
non-polymer
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
N
C
N
12
R
C
N
13
N
N
N
14
N
C
N
15
N
O
N
16
N
N
N
17
N
C
N
18
N
N
N
19
N
C
N
20
N
C
N
21
N
H
N
22
N
H
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
O
N
36
N
P
N
37
N
O
N
38
N
O
N
39
N
O
N
40
N
C
N
41
R
C
N
42
N
O
N
43
S
C
N
44
N
O
N
45
N
C
N
46
R
C
Y
47
N
N
Y
48
N
C
Y
49
N
N
Y
50
N
C
N
51
N
C
N
52
N
O
N
53
N
N
N
54
N
C
N
55
N
N
N
56
N
N
Y
57
N
C
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
O
N
73
N
H
N
74
N
H
N
75
N
MG
N
76
N
N
N
77
N
C
N
78
N
C
N
79
N
C
N
80
N
N
N
81
N
C
N
82
N
C
N
83
N
C
N
84
N
C
N
85
N
N
N
86
N
C
N
87
N
C
N
88
N
C
N
89
N
N
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
doub
N
27
N
sing
N
28
N
doub
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
doub
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
Y
59
N
sing
Y
60
N
sing
Y
61
N
doub
N
62
N
sing
Y
63
N
sing
N
64
N
sing
Y
65
N
doub
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
UK
Nature
NATUAS
0006
0028-0836
282
680
686
10.1038/282680a0
514347
Molecular structure of a left-handed double helical DNA fragment at atomic resolution.
1979
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
264
7921
7935
The Molecular Structure of the Left-Handed Z-DNA Double Helix at 1.0 Angstrom Atomic Resolution. Geometry, Conformation and Ionic Interactions of d(CGCGCG)
1989
10.2210/pdb2dcg/pdb
pdb_00002dcg
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
DIFFRACTOMETER
PICKER
x-ray
1
1.0
1810.205
DNA (5'-D(*CP*GP*CP*GP*CP*G)-3')
2
syn
polymer
24.305
MAGNESIUM ION
1
syn
non-polymer
202.340
SPERMINE
2
syn
non-polymer
18.015
water
74
nat
water
no
no
(DC)(DG)(DC)(DG)(DC)(DG)
CGCGCG
A,B
polydeoxyribonucleotide
n
n
n
n
n
n
1.74
29.13
VAPOR DIFFUSION
VAPOR DIFFUSION
WATER
1
ISOPROPANOL
1
SPERMINE_HCL
1
MGCL2
1
WATER
2
ISOPROPANOL
2
1.277
1
19
A
1
B
12
1.517
A_DC1:DG12_B
1
-1.314
-0.220
0.122
-0.155
-6.429
1
19
A
2
B
11
1.826
A_DG2:DC11_B
2
-3.797
0.237
-0.071
-0.131
4.490
1
19
A
3
B
10
1.591
A_DC3:DG10_B
3
-7.223
-0.314
-0.020
-0.126
-8.461
1
19
A
4
B
9
2.608
A_DG4:DC9_B
4
0.753
0.208
0.110
-0.140
0.083
1
19
A
5
B
8
3.167
A_DC5:DG8_B
5
-0.672
-0.153
-0.007
-0.112
5.444
1
19
A
6
B
7
2.850
A_DG6:DC7_B
6
4.288
0.262
0.183
-0.137
5.507
-7.114
A
A
1
2
24.377
B
B
12
11
3.645
-2.931
0.025
5.344
AA_DC1DG2:DC11DG12_BB
1
0.580
4.820
-6.457
-27.158
3.347
3.128
-51.795
A
A
2
3
7.750
B
B
11
10
3.274
-6.753
-0.147
-0.989
AA_DG2DC3:DG10DC11_BB
2
-0.626
-0.719
-51.379
1.580
-0.210
5.658
-7.066
A
A
3
4
22.707
B
B
10
9
3.860
-2.723
0.043
5.471
AA_DC3DG4:DC9DG10_BB
3
-0.571
-4.761
-6.496
-28.903
-2.901
3.247
-52.747
A
A
4
5
2.611
B
B
9
8
3.283
-2.319
-0.119
-0.857
AA_DG4DC5:DG8DC9_BB
4
1.115
1.256
-52.689
1.115
-0.062
3.909
-8.443
A
A
5
6
6.626
B
B
8
7
3.381
-0.971
0.047
5.098
AA_DC5DG6:DC7DG8_BB
5
1.095
7.475
-8.316
-31.765
3.548
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
1989-01-09
1
1
2008-05-22
1
2
2011-07-13
1
3
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
BNL
Y
BNL
1988-08-29
REL
MG
MAGNESIUM ION
SPM
SPERMINE
HOH
water
MG
13
2
MG
MG
13
A
SPM
14
3
SPM
SPM
14
A
SPM
15
3
SPM
SPM
15
B
HOH
16
4
HOH
HOH
16
A
HOH
17
4
HOH
HOH
17
A
HOH
18
4
HOH
HOH
18
A
HOH
19
4
HOH
HOH
19
A
HOH
20
4
HOH
HOH
20
A
HOH
22
4
HOH
HOH
22
A
HOH
24
4
HOH
HOH
24
A
HOH
26
4
HOH
HOH
26
A
HOH
28
4
HOH
HOH
28
A
HOH
31
4
HOH
HOH
31
A
HOH
33
4
HOH
HOH
33
A
HOH
34
4
HOH
HOH
34
A
HOH
35
4
HOH
HOH
35
A
HOH
36
4
HOH
HOH
36
A
HOH
40
4
HOH
HOH
40
A
HOH
41
4
HOH
HOH
41
A
HOH
44
4
HOH
HOH
44
A
HOH
46
4
HOH
HOH
46
A
HOH
47
4
HOH
HOH
47
A
HOH
48
4
HOH
HOH
48
A
HOH
49
4
HOH
HOH
49
A
HOH
50
4
HOH
HOH
50
A
HOH
51
4
HOH
HOH
51
A
HOH
52
4
HOH
HOH
52
A
HOH
54
4
HOH
HOH
54
A
HOH
57
4
HOH
HOH
57
A
HOH
58
4
HOH
HOH
58
A
HOH
60
4
HOH
HOH
60
A
HOH
62
4
HOH
HOH
62
A
HOH
64
4
HOH
HOH
64
A
HOH
66
4
HOH
HOH
66
A
HOH
71
4
HOH
HOH
71
A
HOH
72
4
HOH
HOH
72
A
HOH
73
4
HOH
HOH
73
A
HOH
74
4
HOH
HOH
74
A
HOH
75
4
HOH
HOH
75
A
HOH
76
4
HOH
HOH
76
A
HOH
77
4
HOH
HOH
77
A
HOH
81
4
HOH
HOH
81
A
HOH
82
4
HOH
HOH
82
A
HOH
83
4
HOH
HOH
83
A
HOH
85
4
HOH
HOH
85
A
HOH
86
4
HOH
HOH
86
A
HOH
87
4
HOH
HOH
87
A
HOH
89
4
HOH
HOH
89
A
HOH
21
4
HOH
HOH
21
B
HOH
23
4
HOH
HOH
23
B
HOH
25
4
HOH
HOH
25
B
HOH
27
4
HOH
HOH
27
B
HOH
29
4
HOH
HOH
29
B
HOH
30
4
HOH
HOH
30
B
HOH
32
4
HOH
HOH
32
B
HOH
37
4
HOH
HOH
37
B
HOH
38
4
HOH
HOH
38
B
HOH
39
4
HOH
HOH
39
B
HOH
42
4
HOH
HOH
42
B
HOH
43
4
HOH
HOH
43
B
HOH
45
4
HOH
HOH
45
B
HOH
53
4
HOH
HOH
53
B
HOH
55
4
HOH
HOH
55
B
HOH
56
4
HOH
HOH
56
B
HOH
59
4
HOH
HOH
59
B
HOH
61
4
HOH
HOH
61
B
HOH
63
4
HOH
HOH
63
B
HOH
65
4
HOH
HOH
65
B
HOH
67
4
HOH
HOH
67
B
HOH
68
4
HOH
HOH
68
B
HOH
69
4
HOH
HOH
69
B
HOH
70
4
HOH
HOH
70
B
HOH
78
4
HOH
HOH
78
B
HOH
79
4
HOH
HOH
79
B
HOH
80
4
HOH
HOH
80
B
HOH
84
4
HOH
HOH
84
B
HOH
88
4
HOH
HOH
88
B
C
1
n
1
DC
1
A
G
2
n
2
DG
2
A
C
3
n
3
DC
3
A
G
4
n
4
DG
4
A
C
5
n
5
DC
5
A
G
6
n
6
DG
6
A
C
7
n
1
DC
7
B
G
8
n
2
DG
8
B
C
9
n
3
DC
9
B
G
10
n
4
DG
10
B
C
11
n
5
DC
11
B
G
12
n
6
DG
12
B
author_defined_assembly
2
dimeric
A
DG
6
A
N7
DG
6
1_555
A
MG
13
C
MG
MG
1_555
A
HOH
16
F
O
HOH
1_555
179.1
A
DG
6
A
N7
DG
6
1_555
A
MG
13
C
MG
MG
1_555
A
HOH
17
F
O
HOH
1_555
88.7
A
HOH
16
F
O
HOH
1_555
A
MG
13
C
MG
MG
1_555
A
HOH
17
F
O
HOH
1_555
92.1
A
DG
6
A
N7
DG
6
1_555
A
MG
13
C
MG
MG
1_555
A
HOH
18
F
O
HOH
1_555
93.5
A
HOH
16
F
O
HOH
1_555
A
MG
13
C
MG
MG
1_555
A
HOH
18
F
O
HOH
1_555
85.7
A
HOH
17
F
O
HOH
1_555
A
MG
13
C
MG
MG
1_555
A
HOH
18
F
O
HOH
1_555
177.2
A
DG
6
A
N7
DG
6
1_555
A
MG
13
C
MG
MG
1_555
A
HOH
19
F
O
HOH
1_555
88.5
A
HOH
16
F
O
HOH
1_555
A
MG
13
C
MG
MG
1_555
A
HOH
19
F
O
HOH
1_555
91.7
A
HOH
17
F
O
HOH
1_555
A
MG
13
C
MG
MG
1_555
A
HOH
19
F
O
HOH
1_555
93.7
A
HOH
18
F
O
HOH
1_555
A
MG
13
C
MG
MG
1_555
A
HOH
19
F
O
HOH
1_555
88.0
A
DG
6
A
N7
DG
6
1_555
A
MG
13
C
MG
MG
1_555
A
HOH
20
F
O
HOH
1_555
86.7
A
HOH
16
F
O
HOH
1_555
A
MG
13
C
MG
MG
1_555
A
HOH
20
F
O
HOH
1_555
93.1
A
HOH
17
F
O
HOH
1_555
A
MG
13
C
MG
MG
1_555
A
HOH
20
F
O
HOH
1_555
84.1
A
HOH
18
F
O
HOH
1_555
A
MG
13
C
MG
MG
1_555
A
HOH
20
F
O
HOH
1_555
94.4
A
HOH
19
F
O
HOH
1_555
A
MG
13
C
MG
MG
1_555
A
HOH
20
F
O
HOH
1_555
174.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
A
O
O
HOH
HOH
58
77
1.81
1
-3.21
0.50
117.40
114.19
A
A
A
C4
C5
C6
DC
DC
DC
1
1
1
N
1
4.56
0.60
118.90
123.46
A
A
A
N1
C2
O2
DC
DC
DC
1
1
1
N
1
-2.78
0.40
104.50
101.72
A
A
A
O4'
C4'
C3'
DG
DG
DG
2
2
2
N
1
2.64
0.40
110.80
113.44
A
A
A
C4
C5
N7
DG
DG
DG
2
2
2
N
1
-4.04
0.40
121.90
117.86
A
A
A
N3
C4
C5
DC
DC
DC
3
3
3
N
1
4.52
0.70
120.20
124.72
A
A
A
C5
C4
N4
DC
DC
DC
3
3
3
N
1
-3.19
0.40
105.40
102.21
A
A
A
N9
C4
C5
DG
DG
DG
4
4
4
N
1
-3.92
0.60
128.60
124.68
A
A
A
C5
C6
O6
DG
DG
DG
4
4
4
N
1
-5.65
0.80
102.40
96.75
A
A
A
C3'
C2'
C1'
DC
DC
DC
5
5
5
N
1
-2.50
0.40
104.50
102.00
A
A
A
O4'
C4'
C3'
DG
DG
DG
6
6
6
N
1
-6.35
0.80
102.40
96.05
B
B
B
C3'
C2'
C1'
DC
DC
DC
7
7
7
N
1
3.27
0.50
106.80
110.07
B
B
B
O4'
C1'
C2'
DC
DC
DC
7
7
7
N
1
3.66
0.60
118.90
122.56
B
B
B
N1
C2
O2
DC
DC
DC
7
7
7
N
1
-3.04
0.40
121.90
118.86
B
B
B
N3
C4
C5
DC
DC
DC
9
9
9
N
1
-3.76
0.40
106.40
102.64
B
B
B
C8
N9
C4
DG
DG
DG
10
10
10
N
1
-5.06
0.80
102.40
97.34
B
B
B
C3'
C2'
C1'
DC
DC
DC
11
11
11
N
1
-5.21
0.70
108.00
102.79
B
B
B
O4'
C1'
N1
DC
DC
DC
11
11
11
N
1
-5.20
0.80
109.40
104.20
B
B
B
O5'
C5'
C4'
DG
DG
DG
12
12
12
N
1
3.45
0.50
111.50
114.95
B
B
B
C5
C6
N1
DG
DG
DG
12
12
12
N
1
A
A
C4
C5
DC
DC
1
1
0.068
0.008
1.425
1.493
N
1
A
A
N7
C8
DG
DG
2
2
0.038
0.006
1.305
1.343
N
1
A
A
C5'
C4'
DC
DC
3
3
0.046
0.007
1.512
1.558
N
1
A
A
C2'
C1'
DC
DC
3
3
0.124
0.010
1.519
1.643
N
1
A
A
N3
C4
DC
DC
3
3
0.050
0.007
1.335
1.385
N
1
A
A
P
OP1
DG
DG
4
4
-0.121
0.017
1.485
1.364
N
1
A
A
C2'
C1'
DC
DC
5
5
0.094
0.010
1.519
1.613
N
1
A
A
C3'
C2'
DG
DG
6
6
-0.053
0.008
1.516
1.463
N
1
B
B
C2'
C1'
DC
DC
7
7
0.087
0.010
1.519
1.606
N
1
B
B
C4'
C3'
DC
DC
9
9
0.076
0.010
1.529
1.605
N
1
B
B
C2'
C1'
DC
DC
9
9
0.083
0.010
1.519
1.602
N
1
B
B
C4'
C3'
DG
DG
10
10
0.060
0.010
1.529
1.589
N
1
B
B
C3'
C2'
DG
DG
10
10
-0.055
0.008
1.516
1.461
N
1
B
B
N7
C8
DG
DG
10
10
0.039
0.006
1.305
1.344
N
1
B
B
C4'
C3'
DG
DG
12
12
0.091
0.010
1.529
1.620
N
1
B
B
O4'
C1'
DG
DG
12
12
0.087
0.011
1.420
1.507
N
1
B
B
O4'
C4'
DG
DG
12
12
-0.063
0.010
1.446
1.383
N
1
B
B
C5
N7
DG
DG
12
12
0.045
0.006
1.388
1.433
N
0.1400000
0.900
15000
1
2.000
TR
isotropic
TR
isotropic
0.900
74
343
29
240
0
fix
fix
0.900
2DCG
15000
2.000
1
refinement
NUCLSQ
MOLECULAR STRUCTURE OF A LEFT-HANDED DOUBLE HELICAL DNA FRAGMENT AT ATOMIC RESOLUTION
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
4
N
N
metalc
2.288
A
DG
6
A
N7
DG
6
1_555
A
MG
13
C
MG
MG
1_555
metalc
2.157
A
MG
13
C
MG
MG
1_555
A
HOH
16
F
O
HOH
1_555
metalc
2.111
A
MG
13
C
MG
MG
1_555
A
HOH
17
F
O
HOH
1_555
metalc
2.071
A
MG
13
C
MG
MG
1_555
A
HOH
18
F
O
HOH
1_555
metalc
2.206
A
MG
13
C
MG
MG
1_555
A
HOH
19
F
O
HOH
1_555
metalc
2.137
A
MG
13
C
MG
MG
1_555
A
HOH
20
F
O
HOH
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N3
DC
1
1_555
B
DG
12
B
N1
DG
6
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N4
DC
1
1_555
B
DG
12
B
O6
DG
6
1_555
hydrog
WATSON-CRICK
A
DC
1
A
O2
DC
1
1_555
B
DG
12
B
N2
DG
6
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N1
DG
2
1_555
B
DC
11
B
N3
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N2
DG
2
1_555
B
DC
11
B
O2
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
2
A
O6
DG
2
1_555
B
DC
11
B
N4
DC
5
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N3
DC
3
1_555
B
DG
10
B
N1
DG
4
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N4
DC
3
1_555
B
DG
10
B
O6
DG
4
1_555
hydrog
WATSON-CRICK
A
DC
3
A
O2
DC
3
1_555
B
DG
10
B
N2
DG
4
1_555
hydrog
WATSON-CRICK
A
DG
4
A
N1
DG
4
1_555
B
DC
9
B
N3
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
4
A
N2
DG
4
1_555
B
DC
9
B
O2
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
4
A
O6
DG
4
1_555
B
DC
9
B
N4
DC
3
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N3
DC
5
1_555
B
DG
8
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N4
DC
5
1_555
B
DG
8
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
5
A
O2
DC
5
1_555
B
DG
8
B
N2
DG
2
1_555
hydrog
WATSON-CRICK
A
DG
6
A
N1
DG
6
1_555
B
DC
7
B
N3
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
6
A
N2
DG
6
1_555
B
DC
7
B
O2
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
6
A
O6
DG
6
1_555
B
DC
7
B
N4
DC
1
1_555
DNA
Z-DNA, DOUBLE HELIX, DNA
2DCG
PDB
1
2DCG
1
6
2DCG
1
6
2DCG
A
1
1
6
7
12
2DCG
7
12
2DCG
B
1
1
6
BINDING SITE FOR RESIDUE MG A 13
A
MG
13
Software
6
BINDING SITE FOR RESIDUE SPM A 14
A
SPM
14
Software
13
BINDING SITE FOR RESIDUE SPM B 15
B
SPM
15
Software
16
A
DG
6
A
DG
6
6
1_555
A
HOH
16
F
HOH
6
1_555
A
HOH
17
F
HOH
6
1_555
A
HOH
18
F
HOH
6
1_555
A
HOH
19
F
HOH
6
1_555
A
HOH
20
F
HOH
6
1_555
A
DG
2
A
DG
2
13
4_456
A
DG
4
A
DG
4
13
1_555
A
DG
4
A
DG
4
13
3_746
A
DC
5
A
DC
5
13
1_555
A
DG
6
A
DG
6
13
1_555
A
HOH
26
F
HOH
13
1_555
B
DG
8
B
DG
2
13
3_746
B
DC
9
B
DC
3
13
3_646
B
HOH
29
G
HOH
13
3_646
B
HOH
68
G
HOH
13
3_746
B
HOH
70
G
HOH
13
1_545
B
HOH
79
G
HOH
13
3_746
B
HOH
80
G
HOH
13
3_746
A
DC
1
A
DC
1
16
1_555
A
DG
2
A
DG
2
16
4_466
A
DG
2
A
DG
2
16
1_555
A
DC
3
A
DC
3
16
1_555
A
HOH
18
F
HOH
16
2_664
A
HOH
20
F
HOH
16
3_756
B
DG
10
B
DG
4
16
1_555
B
DC
11
B
DC
5
16
4_566
B
DC
11
B
DC
5
16
1_655
B
DC
11
B
DC
5
16
1_555
B
DG
12
B
DG
6
16
1_555
B
DG
12
B
DG
6
16
4_566
B
HOH
43
G
HOH
16
1_455
B
HOH
45
G
HOH
16
1_555
B
HOH
53
G
HOH
16
1_555
B
HOH
55
G
HOH
16
1_555
19
P 21 21 21