1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Tomizawa, T.
Koshiba, S.
Watanabe, S.
Harada, T.
Kigawa, T.
Yokoyama, S.
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Solution structure of the 10th filamin domain from human Filamin-B
10.2210/pdb2dia/pdb
pdb_00002dia
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
11208.356
Filamin-B
Filamin domain
1
man
polymer
FLN-B, Beta-filamin, Actin-binding-like protein, Thyroid autoantigen, Truncated actin-binding protein, Truncated ABP, ABP-280 homolog, ABP-278, Filamin 3, Filamin homolog 1, Fh1
no
no
GSSGSSGPFDPSKVVASGPGLEHGKVGEAGLLSVDCSEAGPGALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMY
TLTMKYGGELVPHFPARVKVEPAVDTSSGPSSG
GSSGSSGPFDPSKVVASGPGLEHGKVGEAGLLSVDCSEAGPGALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMY
TLTMKYGGELVPHFPARVKVEPAVDTSSGPSSG
A
hsk003002600.2
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
sample
Cell-free protein synthesis
FLNB
9606
Homo sapiens
Cell free synthesis
PLASMID
P051205-11
RIKEN Structural Genomics/Proteomics Initiative
RSGI
NPPSFA, National Project on Protein Structural and Functional Analyses
database_2
pdbx_nmr_software
pdbx_nmr_spectrometer
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2006-09-29
1
1
2008-04-30
1
2
2011-07-13
1
3
2022-03-09
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
_struct_ref_seq_dif.details
Y
PDBJ
Y
PDBJ
2006-03-29
REL
REL
target function, structures with the lowest energy, structures with the least restraint violations
100
20
3D_15N-separated_NOESY
3D_13C-separated_NOESY
120mM
7.0
ambient
298
K
torsion angle dynamics, restrainted molecular dynamics
1
lowest energy
1.11mM Filamin domain U-15N,13C; 20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O
90% H2O/10% D2O
Bruker
collection
XwinNMR
3.5
Delaglio, F.
processing
NMRPipe
20030801
Johnson, B.A.
data analysis
NMRView
5.0.4
Kobayashi, N.
data analysis
KUJIRA
0.9742
Guntert, P.
structure solution
CYANA
2.0.17
Guntert, P.
refinement
CYANA
2.0.17
800
Bruker
AVANCE
GLY
1
n
1
GLY
1
A
SER
2
n
2
SER
2
A
SER
3
n
3
SER
3
A
GLY
4
n
4
GLY
4
A
SER
5
n
5
SER
5
A
SER
6
n
6
SER
6
A
GLY
7
n
7
GLY
7
A
PRO
8
n
8
PRO
8
A
PHE
9
n
9
PHE
9
A
ASP
10
n
10
ASP
10
A
PRO
11
n
11
PRO
11
A
SER
12
n
12
SER
12
A
LYS
13
n
13
LYS
13
A
VAL
14
n
14
VAL
14
A
VAL
15
n
15
VAL
15
A
ALA
16
n
16
ALA
16
A
SER
17
n
17
SER
17
A
GLY
18
n
18
GLY
18
A
PRO
19
n
19
PRO
19
A
GLY
20
n
20
GLY
20
A
LEU
21
n
21
LEU
21
A
GLU
22
n
22
GLU
22
A
HIS
23
n
23
HIS
23
A
GLY
24
n
24
GLY
24
A
LYS
25
n
25
LYS
25
A
VAL
26
n
26
VAL
26
A
GLY
27
n
27
GLY
27
A
GLU
28
n
28
GLU
28
A
ALA
29
n
29
ALA
29
A
GLY
30
n
30
GLY
30
A
LEU
31
n
31
LEU
31
A
LEU
32
n
32
LEU
32
A
SER
33
n
33
SER
33
A
VAL
34
n
34
VAL
34
A
ASP
35
n
35
ASP
35
A
CYS
36
n
36
CYS
36
A
SER
37
n
37
SER
37
A
GLU
38
n
38
GLU
38
A
ALA
39
n
39
ALA
39
A
GLY
40
n
40
GLY
40
A
PRO
41
n
41
PRO
41
A
GLY
42
n
42
GLY
42
A
ALA
43
n
43
ALA
43
A
LEU
44
n
44
LEU
44
A
GLY
45
n
45
GLY
45
A
LEU
46
n
46
LEU
46
A
GLU
47
n
47
GLU
47
A
ALA
48
n
48
ALA
48
A
VAL
49
n
49
VAL
49
A
SER
50
n
50
SER
50
A
ASP
51
n
51
ASP
51
A
SER
52
n
52
SER
52
A
GLY
53
n
53
GLY
53
A
THR
54
n
54
THR
54
A
LYS
55
n
55
LYS
55
A
ALA
56
n
56
ALA
56
A
GLU
57
n
57
GLU
57
A
VAL
58
n
58
VAL
58
A
SER
59
n
59
SER
59
A
ILE
60
n
60
ILE
60
A
GLN
61
n
61
GLN
61
A
ASN
62
n
62
ASN
62
A
ASN
63
n
63
ASN
63
A
LYS
64
n
64
LYS
64
A
ASP
65
n
65
ASP
65
A
GLY
66
n
66
GLY
66
A
THR
67
n
67
THR
67
A
TYR
68
n
68
TYR
68
A
ALA
69
n
69
ALA
69
A
VAL
70
n
70
VAL
70
A
THR
71
n
71
THR
71
A
TYR
72
n
72
TYR
72
A
VAL
73
n
73
VAL
73
A
PRO
74
n
74
PRO
74
A
LEU
75
n
75
LEU
75
A
THR
76
n
76
THR
76
A
ALA
77
n
77
ALA
77
A
GLY
78
n
78
GLY
78
A
MET
79
n
79
MET
79
A
TYR
80
n
80
TYR
80
A
THR
81
n
81
THR
81
A
LEU
82
n
82
LEU
82
A
THR
83
n
83
THR
83
A
MET
84
n
84
MET
84
A
LYS
85
n
85
LYS
85
A
TYR
86
n
86
TYR
86
A
GLY
87
n
87
GLY
87
A
GLY
88
n
88
GLY
88
A
GLU
89
n
89
GLU
89
A
LEU
90
n
90
LEU
90
A
VAL
91
n
91
VAL
91
A
PRO
92
n
92
PRO
92
A
HIS
93
n
93
HIS
93
A
PHE
94
n
94
PHE
94
A
PRO
95
n
95
PRO
95
A
ALA
96
n
96
ALA
96
A
ARG
97
n
97
ARG
97
A
VAL
98
n
98
VAL
98
A
LYS
99
n
99
LYS
99
A
VAL
100
n
100
VAL
100
A
GLU
101
n
101
GLU
101
A
PRO
102
n
102
PRO
102
A
ALA
103
n
103
ALA
103
A
VAL
104
n
104
VAL
104
A
ASP
105
n
105
ASP
105
A
THR
106
n
106
THR
106
A
SER
107
n
107
SER
107
A
SER
108
n
108
SER
108
A
GLY
109
n
109
GLY
109
A
PRO
110
n
110
PRO
110
A
SER
111
n
111
SER
111
A
SER
112
n
112
SER
112
A
GLY
113
n
113
GLY
113
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
15
A
N
VAL
15
A
O
ASP
35
A
O
ASP
35
A
N
VAL
34
A
N
VAL
34
A
O
TYR
68
A
O
TYR
68
A
O
ALA
69
A
O
ALA
69
A
N
GLN
61
A
N
GLN
61
A
N
GLY
24
A
N
GLY
24
A
O
GLU
101
A
O
GLU
101
A
O
VAL
98
A
O
VAL
98
A
N
TYR
80
A
N
TYR
80
A
O
LYS
85
A
O
LYS
85
A
N
GLY
45
A
N
GLY
45
A
N
SER
50
A
N
SER
50
A
O
THR
54
A
O
THR
54
A
N
GLY
24
A
N
GLY
24
A
O
GLU
101
A
O
GLU
101
A
O
VAL
98
A
O
VAL
98
A
N
TYR
80
A
N
TYR
80
A
N
TYR
86
A
N
TYR
86
A
O
GLU
89
A
O
GLU
89
1
A
ASP
10
-172.34
119.15
1
A
SER
37
-108.88
-67.21
1
A
PRO
41
-69.75
-166.88
1
A
PRO
92
-69.79
3.63
1
A
ALA
103
-96.02
38.67
2
A
ASP
10
-170.67
118.74
2
A
VAL
26
-52.30
109.56
2
A
SER
37
-95.22
-70.36
2
A
PRO
41
-69.76
-163.81
2
A
ASP
65
-84.19
39.52
2
A
PRO
92
-69.71
4.43
2
A
ALA
103
-84.47
40.08
3
A
ASP
10
-162.25
115.30
3
A
SER
37
-104.66
-65.38
3
A
PRO
41
-69.83
-167.57
3
A
ASN
62
-53.37
102.78
3
A
LYS
64
-76.36
48.23
3
A
PRO
92
-69.82
3.59
3
A
ALA
103
-93.18
46.37
3
A
SER
107
-42.90
166.15
3
A
SER
111
-34.45
126.01
3
A
SER
112
-172.44
123.03
4
A
ASP
10
-168.07
117.50
4
A
SER
37
-124.51
-69.40
4
A
PRO
41
-69.74
-170.13
4
A
LYS
64
-85.25
41.56
4
A
PRO
92
-69.78
3.07
4
A
ALA
103
-99.85
35.91
4
A
SER
111
-60.04
98.91
5
A
SER
3
-84.15
49.38
5
A
ASP
10
-168.04
118.90
5
A
GLU
28
-61.48
-178.63
5
A
PRO
41
-69.75
-163.63
5
A
SER
52
-88.63
31.63
5
A
PRO
92
-69.71
4.89
5
A
ALA
103
-83.97
44.69
5
A
PRO
110
-69.73
-172.24
5
A
SER
111
-63.72
96.64
5
A
SER
112
39.27
47.51
6
A
ASP
10
-164.50
117.25
6
A
SER
37
-124.59
-66.23
6
A
PRO
41
-69.79
-171.09
6
A
LYS
64
-94.75
33.30
6
A
PRO
92
-69.72
3.67
6
A
ALA
103
-88.19
46.69
6
A
SER
112
-62.56
99.90
7
A
ASP
10
-166.20
117.67
7
A
SER
37
-102.60
-62.08
7
A
PRO
41
-69.71
-164.62
7
A
PRO
92
-69.78
3.96
7
A
ALA
103
-82.39
47.97
7
A
SER
107
-104.95
44.55
8
A
SER
37
-132.05
-61.01
8
A
PRO
41
-69.72
-175.22
8
A
LYS
64
-90.72
42.27
8
A
PRO
92
-69.83
3.63
8
A
ALA
103
-107.71
50.63
8
A
SER
112
36.58
43.79
9
A
ASP
10
-164.79
113.24
9
A
SER
37
-128.97
-62.20
9
A
PRO
41
-69.70
-177.35
9
A
ASP
65
-82.83
39.09
9
A
PRO
92
-69.77
4.31
9
A
ALA
103
-91.13
36.48
10
A
SER
6
37.84
46.40
10
A
ASP
10
-173.89
117.73
10
A
PRO
41
-69.73
-170.72
10
A
PRO
92
-69.76
4.41
10
A
SER
108
-37.90
112.97
11
A
ASP
10
-171.15
113.99
11
A
SER
37
-107.39
-66.42
11
A
PRO
41
-69.75
-176.50
11
A
SER
52
-85.35
30.89
11
A
ASP
65
-83.15
39.30
11
A
PRO
74
-69.77
90.97
11
A
PRO
92
-69.75
4.59
11
A
SER
112
34.86
42.15
12
A
SER
2
-57.53
109.74
12
A
ASP
10
-164.02
116.12
12
A
VAL
26
-54.12
106.65
12
A
PRO
41
-69.75
-168.74
12
A
SER
52
-90.14
31.03
12
A
PRO
92
-69.85
3.49
12
A
VAL
104
-38.29
124.38
13
A
ASP
10
-161.89
112.00
13
A
VAL
26
-52.02
108.78
13
A
PRO
41
-69.78
-177.76
13
A
ASP
65
-86.81
33.57
13
A
PRO
92
-69.82
4.44
13
A
VAL
104
-98.13
49.00
13
A
SER
111
-103.07
42.21
14
A
SER
2
-174.20
129.70
14
A
VAL
26
-52.45
107.67
14
A
SER
37
-120.69
-51.52
14
A
PRO
41
-69.77
-163.65
14
A
PRO
92
-69.76
3.65
14
A
ALA
103
-85.85
41.34
14
A
THR
106
-38.38
141.89
14
A
PRO
110
-69.79
90.87
14
A
SER
111
33.74
47.31
15
A
SER
5
-56.62
171.21
15
A
SER
37
-120.84
-71.24
15
A
PRO
41
-69.70
-173.57
15
A
PRO
92
-69.78
4.06
15
A
ALA
103
-90.98
37.45
15
A
VAL
104
-107.60
49.76
15
A
SER
108
-42.22
108.19
16
A
ASP
10
-160.30
114.43
16
A
VAL
26
-53.19
107.77
16
A
PRO
41
-69.81
-169.57
16
A
PRO
92
-69.78
4.38
16
A
ALA
103
-86.69
42.94
16
A
PRO
110
-69.78
94.08
17
A
SER
6
36.69
39.59
17
A
PRO
41
-69.79
-166.96
17
A
PRO
92
-69.74
3.62
17
A
ALA
103
-89.06
36.11
17
A
PRO
110
-69.76
89.69
18
A
ASP
10
-169.05
116.06
18
A
SER
37
-104.80
-67.11
18
A
PRO
41
-69.79
-164.31
18
A
PRO
92
-69.78
4.45
18
A
ALA
103
-85.06
48.20
18
A
ASP
105
71.25
48.35
19
A
SER
37
-131.52
-74.66
19
A
PRO
41
-69.78
-166.73
19
A
PRO
92
-69.71
3.49
19
A
ALA
103
-98.27
44.04
19
A
VAL
104
-99.26
48.53
19
A
PRO
110
-69.81
3.02
20
A
SER
6
-50.43
174.78
20
A
ASP
10
-169.44
115.46
20
A
VAL
26
-52.53
108.00
20
A
GLU
28
-67.69
-177.09
20
A
PRO
41
-69.79
-170.94
20
A
LYS
64
-88.68
43.94
20
A
PRO
92
-69.76
3.43
20
A
ALA
103
-109.65
48.15
20
A
THR
106
-175.01
146.83
Solution structure of the 10th filamin domain from human Filamin-B
1
N
N
A
ASP
10
A
ASP
10
HELX_P
A
SER
12
A
SER
12
5
1
3
A
GLY
18
A
GLY
18
HELX_P
A
GLU
22
A
GLU
22
5
2
5
STRUCTURAL PROTEIN
beta-sandwich, immunoglobulin-like fold, filamin domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, STRUCTURAL PROTEIN
A
PHE
94
A
PHE
94
1
A
PRO
95
A
PRO
95
-0.02
A
PHE
94
A
PHE
94
2
A
PRO
95
A
PRO
95
-0.01
A
PHE
94
A
PHE
94
3
A
PRO
95
A
PRO
95
-0.02
A
PHE
94
A
PHE
94
4
A
PRO
95
A
PRO
95
0.04
A
PHE
94
A
PHE
94
5
A
PRO
95
A
PRO
95
0.02
A
PHE
94
A
PHE
94
6
A
PRO
95
A
PRO
95
0.00
A
PHE
94
A
PHE
94
7
A
PRO
95
A
PRO
95
0.03
A
PHE
94
A
PHE
94
8
A
PRO
95
A
PRO
95
0.00
A
PHE
94
A
PHE
94
9
A
PRO
95
A
PRO
95
0.02
A
PHE
94
A
PHE
94
10
A
PRO
95
A
PRO
95
0.02
A
PHE
94
A
PHE
94
11
A
PRO
95
A
PRO
95
-0.10
A
PHE
94
A
PHE
94
12
A
PRO
95
A
PRO
95
-0.01
A
PHE
94
A
PHE
94
13
A
PRO
95
A
PRO
95
0.01
A
PHE
94
A
PHE
94
14
A
PRO
95
A
PRO
95
-0.04
A
PHE
94
A
PHE
94
15
A
PRO
95
A
PRO
95
0.06
A
PHE
94
A
PHE
94
16
A
PRO
95
A
PRO
95
0.00
A
PHE
94
A
PHE
94
17
A
PRO
95
A
PRO
95
0.05
A
PHE
94
A
PHE
94
18
A
PRO
95
A
PRO
95
0.02
A
PHE
94
A
PHE
94
19
A
PRO
95
A
PRO
95
-0.01
A
PHE
94
A
PHE
94
20
A
PRO
95
A
PRO
95
0.06
FLNB_HUMAN
UNP
1
1016
O75369
1016
1035
2DIA
8
107
O75369
A
1
8
107
1
cloning artifact
GLY
1
2DIA
A
O75369
UNP
1
1
cloning artifact
SER
2
2DIA
A
O75369
UNP
2
1
cloning artifact
SER
3
2DIA
A
O75369
UNP
3
1
cloning artifact
GLY
4
2DIA
A
O75369
UNP
4
1
cloning artifact
SER
5
2DIA
A
O75369
UNP
5
1
cloning artifact
SER
6
2DIA
A
O75369
UNP
6
1
cloning artifact
GLY
7
2DIA
A
O75369
UNP
7
1
ASN
SEE REMARK 999
ASP
35
2DIA
A
O75369
UNP
1157
35
1
cloning artifact
SER
108
2DIA
A
O75369
UNP
108
1
cloning artifact
GLY
109
2DIA
A
O75369
UNP
109
1
cloning artifact
PRO
110
2DIA
A
O75369
UNP
110
1
cloning artifact
SER
111
2DIA
A
O75369
UNP
111
1
cloning artifact
SER
112
2DIA
A
O75369
UNP
112
1
cloning artifact
GLY
113
2DIA
A
O75369
UNP
113
4
5
4
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
VAL
14
A
VAL
14
A
SER
17
A
SER
17
A
LEU
32
A
LEU
32
A
CYS
36
A
CYS
36
A
THR
67
A
THR
67
A
VAL
73
A
VAL
73
A
GLU
57
A
GLU
57
A
ASN
62
A
ASN
62
A
GLY
24
A
GLY
24
A
LYS
25
A
LYS
25
A
ALA
96
A
ALA
96
A
GLU
101
A
GLU
101
A
GLY
78
A
GLY
78
A
TYR
86
A
TYR
86
A
LEU
44
A
LEU
44
A
SER
50
A
SER
50
A
THR
54
A
THR
54
A
LYS
55
A
LYS
55
A
GLY
24
A
GLY
24
A
LYS
25
A
LYS
25
A
ALA
96
A
ALA
96
A
GLU
101
A
GLU
101
A
GLY
78
A
GLY
78
A
TYR
86
A
TYR
86
A
GLU
89
A
GLU
89
A
LEU
90
A
LEU
90