1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Yoneyama, M. Tochio, N. Koshiba, S. Watabe, S. Harada, T. Kigawa, T. Yokoyama, S. RIKEN Structural Genomics/Proteomics Initiative (RSGI) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be Published 0353 Solution structure of the BSD domain of human TFIIH basal transcription factor complex p62 subunit 10.2210/pdb2dii/pdb pdb_00002dii 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 6781.534 TFIIH basal transcription factor complex p62 subunit BSD domain 1 man polymer Basic transcription factor 62 kDa subunit, BTF2-p62, General transcription factor IIH polypeptide 1 no no GSSGSSGFKRKANKELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLNVNSGPSSG GSSGSSGFKRKANKELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLNVNSGPSSG A hsk003002104.1 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo sample Cell-free protein synthesis GTF2H1, BTF2 9606 Homo sapiens Cell free synthesis PLASMID P051212-11 RIKEN Structural Genomics/Proteomics Initiative RSGI NPPSFA, National Project on Protein Structural and Functional Analyses database_2 pdbx_nmr_software pdbx_nmr_spectrometer pdbx_struct_assembly pdbx_struct_oper_list struct_ref_seq_dif repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2006-09-30 1 1 2008-04-30 1 2 2011-07-13 1 3 2022-03-09 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name _pdbx_nmr_spectrometer.model _struct_ref_seq_dif.details Y PDBJ Y PDBJ 2006-03-30 REL target function,structures with the least restraint violations 100 20 3D_15N-separated_NOESY 3D_13C-separated_NOESY 120 7.0 ambient 296 K torsion angle dynamics 1 lowest energy 1.07mM BSD domain U-15N,13C; 20mM d-Tris HCl (pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O 90% H2O/10% D2O Bruker collection XwinNMR 3.5 Delaglio, F. processing NMRPipe 20030801 Johnson, B.A. data analysis NMRView 5.0.4 Kobayashi, N. data analysis KUJIRA 0.9736 Guntert, P. structure solution CYANA 2.0.17 Guntert, P. refinement CYANA 2.0.17 800 Bruker AVANCE GLY 1 n 1 GLY 1 A SER 2 n 2 SER 2 A SER 3 n 3 SER 3 A GLY 4 n 4 GLY 4 A SER 5 n 5 SER 5 A SER 6 n 6 SER 6 A GLY 7 n 7 GLY 7 A PHE 8 n 8 PHE 8 A LYS 9 n 9 LYS 9 A ARG 10 n 10 ARG 10 A LYS 11 n 11 LYS 11 A ALA 12 n 12 ALA 12 A ASN 13 n 13 ASN 13 A LYS 14 n 14 LYS 14 A GLU 15 n 15 GLU 15 A LEU 16 n 16 LEU 16 A GLU 17 n 17 GLU 17 A GLU 18 n 18 GLU 18 A LYS 19 n 19 LYS 19 A ASN 20 n 20 ASN 20 A ARG 21 n 21 ARG 21 A MET 22 n 22 MET 22 A LEU 23 n 23 LEU 23 A GLN 24 n 24 GLN 24 A GLU 25 n 25 GLU 25 A ASP 26 n 26 ASP 26 A PRO 27 n 27 PRO 27 A VAL 28 n 28 VAL 28 A LEU 29 n 29 LEU 29 A PHE 30 n 30 PHE 30 A GLN 31 n 31 GLN 31 A LEU 32 n 32 LEU 32 A TYR 33 n 33 TYR 33 A LYS 34 n 34 LYS 34 A ASP 35 n 35 ASP 35 A LEU 36 n 36 LEU 36 A VAL 37 n 37 VAL 37 A VAL 38 n 38 VAL 38 A SER 39 n 39 SER 39 A GLN 40 n 40 GLN 40 A VAL 41 n 41 VAL 41 A ILE 42 n 42 ILE 42 A SER 43 n 43 SER 43 A ALA 44 n 44 ALA 44 A GLU 45 n 45 GLU 45 A GLU 46 n 46 GLU 46 A PHE 47 n 47 PHE 47 A TRP 48 n 48 TRP 48 A ALA 49 n 49 ALA 49 A ASN 50 n 50 ASN 50 A ARG 51 n 51 ARG 51 A LEU 52 n 52 LEU 52 A ASN 53 n 53 ASN 53 A VAL 54 n 54 VAL 54 A ASN 55 n 55 ASN 55 A SER 56 n 56 SER 56 A GLY 57 n 57 GLY 57 A PRO 58 n 58 PRO 58 A SER 59 n 59 SER 59 A SER 60 n 60 SER 60 A GLY 61 n 61 GLY 61 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A SER 3 -40.42 105.09 1 A SER 6 -131.16 -32.26 1 A ASN 13 -99.07 43.72 1 A VAL 54 -130.01 -35.80 1 A ASN 55 -39.56 107.09 2 A SER 5 -39.89 148.99 2 A ASN 55 -43.05 150.27 2 A SER 56 -34.51 142.60 2 A SER 59 -108.13 -60.36 3 A SER 6 -46.46 163.06 3 A ASN 13 -77.77 48.09 3 A VAL 54 -87.71 43.49 4 A SER 2 -121.50 -59.78 4 A LYS 11 34.39 41.66 4 A ASN 13 -94.13 44.19 4 A ARG 21 -38.08 -36.96 4 A LEU 23 -35.68 -37.16 4 A ASP 35 -48.64 -19.81 4 A LEU 36 -105.52 -60.48 4 A ALA 44 -39.64 -37.36 4 A ASN 50 -85.06 37.29 4 A ARG 51 -123.24 -65.89 4 A ASN 55 37.29 41.51 4 A SER 59 35.21 47.45 4 A SER 60 -99.88 43.52 5 A ASN 13 -82.47 43.56 6 A PHE 8 -88.96 42.27 6 A LYS 14 -35.07 -32.52 6 A TYR 33 -39.31 -39.67 6 A LEU 36 -95.72 -60.60 7 A SER 3 -48.11 173.33 7 A ASN 13 -104.68 41.79 8 A LYS 9 -39.16 144.28 8 A LEU 36 -98.64 -60.52 9 A LEU 52 -40.52 153.64 10 A LEU 36 -104.08 -60.53 10 A ASN 53 70.99 43.38 10 A VAL 54 -101.39 41.15 11 A LYS 9 -85.05 42.20 11 A LYS 11 -96.82 43.15 12 A LEU 36 -100.90 -60.44 12 A ASN 50 -85.07 31.90 12 A ARG 51 -124.49 -67.27 12 A ASN 53 72.45 40.04 12 A ASN 55 -102.02 79.85 12 A PRO 58 -69.71 87.74 13 A SER 2 -68.06 85.09 13 A ASN 13 -69.30 95.70 13 A ASP 35 -39.57 -26.31 13 A ASN 50 -108.52 58.92 13 A ARG 51 -132.99 -52.70 13 A ASN 53 -82.84 48.72 13 A VAL 54 36.64 37.03 14 A SER 3 -126.24 -53.76 14 A SER 56 -174.16 137.72 15 A LYS 9 34.97 39.24 15 A GLU 46 -39.51 -32.91 15 A PHE 47 -66.26 -71.67 16 A SER 2 -59.67 174.31 16 A ARG 10 -129.30 -52.23 16 A LEU 36 -97.98 -60.59 16 A LEU 52 -47.84 100.97 16 A ASN 53 -103.97 46.53 16 A SER 56 -101.63 -63.57 17 A VAL 54 -105.67 46.50 18 A ALA 12 -172.35 119.26 18 A LYS 14 -100.17 -63.61 18 A ASP 35 -39.40 -26.98 18 A LEU 36 -97.15 -60.32 18 A ALA 49 -38.28 -37.39 18 A ASN 55 -95.71 41.05 18 A SER 59 -35.02 130.33 19 A ARG 10 71.52 41.22 19 A ASN 13 -81.62 41.69 19 A LEU 36 -102.10 -60.39 19 A ALA 49 -34.41 -37.61 20 A LEU 36 -99.54 -60.58 20 A ALA 44 -36.28 -39.47 20 A ARG 51 -122.21 -51.78 20 A SER 56 -35.04 134.01 Solution structure of the BSD domain of human TFIIH basal transcription factor complex p62 subunit 1 N N A ASN 13 A ASN 13 HELX_P A ASP 26 A ASP 26 1 1 14 A ASP 26 A ASP 26 HELX_P A VAL 38 A VAL 38 1 2 13 A SER 43 A SER 43 HELX_P A LEU 52 A LEU 52 1 3 10 TRANSCRIPTION BTF2-p62, General transcription factor IIH polypeptide 1, Nuclear protein, Transcription regulation, structural genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSCRIPTION TF2H1_HUMAN UNP 1 103 P32780 103 150 2DII 8 55 P32780 A 1 8 55 1 cloning artifact GLY 1 2DII A P32780 UNP 1 1 cloning artifact SER 2 2DII A P32780 UNP 2 1 cloning artifact SER 3 2DII A P32780 UNP 3 1 cloning artifact GLY 4 2DII A P32780 UNP 4 1 cloning artifact SER 5 2DII A P32780 UNP 5 1 cloning artifact SER 6 2DII A P32780 UNP 6 1 cloning artifact GLY 7 2DII A P32780 UNP 7 1 cloning artifact SER 56 2DII A P32780 UNP 56 1 cloning artifact GLY 57 2DII A P32780 UNP 57 1 cloning artifact PRO 58 2DII A P32780 UNP 58 1 cloning artifact SER 59 2DII A P32780 UNP 59 1 cloning artifact SER 60 2DII A P32780 UNP 60 1 cloning artifact GLY 61 2DII A P32780 UNP 61