1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Kobayashi, N. Tomizawa, T. Koshiba, S. Inoue, M. Kigawa, T. Yokoyama, S. RIKEN Structural Genomics/Proteomics Initiative (RSGI) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be Published 0353 Solution structure of J-domain from the DnaJ homolog, human Tid1 protein 10.2210/pdb2dn9/pdb pdb_00002dn9 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 8782.624 DnaJ homolog subfamily A member 3 J-domain 1 man polymer Tumorous imaginal discs protein Tid56 homolog, DnaJ protein Tid-1, hTid-1 no no GSSGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGPSSG GSSGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGPSSG A hsi002014013.1 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo sample Cell-free synthesis DNAJA3 9606 Homo sapiens Cell free synthesis PLASMID P050516-13 RIKEN Structural Genomics/Proteomics Initiative RSGI NPPSFA, National Project on Protein Structural and Functional Analyses database_2 pdbx_nmr_software pdbx_nmr_spectrometer pdbx_struct_assembly pdbx_struct_oper_list struct_ref_seq_dif repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2006-10-25 1 1 2008-04-30 1 2 2011-07-13 1 3 2022-03-09 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name _pdbx_nmr_spectrometer.model _struct_ref_seq_dif.details Y PDBJ Y PDBJ 2006-04-25 REL target function, structures with the lowest energy 100 20 3D_15N-separated_NOESY 3D_13C-separated_NOESY 120mM 7.0 ambient 296 K torsion angle dynamics, restrained molecular dynamics 1 lowest energy 1.06mM J-domain U-13C, 15N; 20mM d-Tris-HCl(pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O, 90% H2O 90% H2O/10% D2O Bruker collection XwinNMR 3.5 Delaglio, F. processing NMRPipe 20031121 Johnson, B.A. data analysis NMRView 5.0.4 Kobayashi, N. data analysis KUJIRA 0.9742 Guntert, P. structure solution CYANA 2.0.17 Guntert, P. refinement CYANA 2.0.17 800 Bruker AVANCE GLY 1 n 1 GLY 1 A SER 2 n 2 SER 2 A SER 3 n 3 SER 3 A GLY 4 n 4 GLY 4 A SER 5 n 5 SER 5 A SER 6 n 6 SER 6 A GLY 7 n 7 GLY 7 A ASP 8 n 8 ASP 8 A TYR 9 n 9 TYR 9 A TYR 10 n 10 TYR 10 A GLN 11 n 11 GLN 11 A ILE 12 n 12 ILE 12 A LEU 13 n 13 LEU 13 A GLY 14 n 14 GLY 14 A VAL 15 n 15 VAL 15 A PRO 16 n 16 PRO 16 A ARG 17 n 17 ARG 17 A ASN 18 n 18 ASN 18 A ALA 19 n 19 ALA 19 A SER 20 n 20 SER 20 A GLN 21 n 21 GLN 21 A LYS 22 n 22 LYS 22 A GLU 23 n 23 GLU 23 A ILE 24 n 24 ILE 24 A LYS 25 n 25 LYS 25 A LYS 26 n 26 LYS 26 A ALA 27 n 27 ALA 27 A TYR 28 n 28 TYR 28 A TYR 29 n 29 TYR 29 A GLN 30 n 30 GLN 30 A LEU 31 n 31 LEU 31 A ALA 32 n 32 ALA 32 A LYS 33 n 33 LYS 33 A LYS 34 n 34 LYS 34 A TYR 35 n 35 TYR 35 A HIS 36 n 36 HIS 36 A PRO 37 n 37 PRO 37 A ASP 38 n 38 ASP 38 A THR 39 n 39 THR 39 A ASN 40 n 40 ASN 40 A LYS 41 n 41 LYS 41 A ASP 42 n 42 ASP 42 A ASP 43 n 43 ASP 43 A PRO 44 n 44 PRO 44 A LYS 45 n 45 LYS 45 A ALA 46 n 46 ALA 46 A LYS 47 n 47 LYS 47 A GLU 48 n 48 GLU 48 A LYS 49 n 49 LYS 49 A PHE 50 n 50 PHE 50 A SER 51 n 51 SER 51 A GLN 52 n 52 GLN 52 A LEU 53 n 53 LEU 53 A ALA 54 n 54 ALA 54 A GLU 55 n 55 GLU 55 A ALA 56 n 56 ALA 56 A TYR 57 n 57 TYR 57 A GLU 58 n 58 GLU 58 A VAL 59 n 59 VAL 59 A LEU 60 n 60 LEU 60 A SER 61 n 61 SER 61 A ASP 62 n 62 ASP 62 A GLU 63 n 63 GLU 63 A VAL 64 n 64 VAL 64 A LYS 65 n 65 LYS 65 A ARG 66 n 66 ARG 66 A LYS 67 n 67 LYS 67 A GLN 68 n 68 GLN 68 A TYR 69 n 69 TYR 69 A ASP 70 n 70 ASP 70 A ALA 71 n 71 ALA 71 A TYR 72 n 72 TYR 72 A GLY 73 n 73 GLY 73 A SER 74 n 74 SER 74 A GLY 75 n 75 GLY 75 A PRO 76 n 76 PRO 76 A SER 77 n 77 SER 77 A SER 78 n 78 SER 78 A GLY 79 n 79 GLY 79 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A ASP 42 -89.37 32.59 1 A LYS 47 -38.56 -35.74 1 A SER 61 -38.92 -28.56 1 A SER 77 -52.42 107.90 1 A SER 78 -34.50 142.94 2 A SER 6 -65.97 89.64 2 A ASN 40 -111.98 59.14 3 A ASP 8 -68.17 97.81 3 A ASN 18 -104.14 43.28 3 A TYR 35 -101.86 43.67 3 A ASN 40 -105.19 77.03 3 A SER 78 -93.35 -70.11 4 A SER 2 -66.59 81.78 4 A ASN 18 -98.64 42.21 4 A GLN 21 -38.46 -38.48 4 A ASN 40 -112.27 72.61 4 A GLU 58 -37.36 -38.82 4 A PRO 76 -69.82 91.86 5 A ASN 18 -98.64 39.94 5 A TYR 35 -98.16 37.77 5 A SER 78 -106.00 -70.50 6 A GLN 21 -39.54 -35.04 6 A PRO 76 -69.81 95.23 7 A ASN 18 -99.60 36.35 7 A GLN 21 -37.29 -30.55 7 A TYR 35 -96.75 44.08 7 A ASN 40 -109.89 78.74 8 A ALA 32 -39.96 -34.85 9 A ASN 18 -101.64 44.98 9 A TYR 35 -103.67 47.25 9 A ASN 40 -97.97 52.51 9 A ASP 42 -84.51 30.93 9 A VAL 64 -67.27 -70.04 10 A ASN 18 -97.18 40.62 10 A LYS 41 -50.14 87.61 10 A SER 77 -41.32 96.68 11 A SER 6 -46.93 150.11 11 A ASN 18 -97.72 34.01 11 A LYS 41 -78.10 -71.68 11 A ASP 43 -32.67 96.04 12 A GLN 21 -35.85 -35.91 12 A TYR 35 -113.29 53.41 12 A ASN 40 -114.13 59.11 12 A ASP 43 -32.89 96.18 13 A ASP 8 -66.48 97.52 13 A ASN 40 -112.67 50.37 13 A ASP 43 -32.96 96.29 13 A GLU 58 -37.47 -37.15 13 A SER 61 -39.70 -32.85 14 A ASN 18 -106.45 42.51 14 A TYR 35 -106.84 47.63 14 A ASP 43 -33.40 96.59 15 A ASN 18 -99.50 37.43 15 A TYR 35 -109.01 42.02 15 A PRO 37 -69.76 2.75 15 A ASN 40 -116.20 52.45 15 A ASP 43 -33.27 96.48 16 A ASN 18 -94.18 34.37 16 A ASP 43 -32.62 95.99 16 A SER 77 -67.02 94.37 17 A SER 5 39.87 40.16 17 A SER 6 -96.83 45.62 17 A SER 61 -37.94 -38.96 18 A SER 5 -97.92 42.76 18 A TYR 35 -94.11 34.72 18 A PRO 76 -69.78 1.21 18 A SER 77 -42.14 108.89 19 A ASP 8 -53.05 105.69 19 A ASN 18 -96.19 39.27 19 A GLN 21 -37.92 -39.41 19 A THR 39 -131.25 -38.92 19 A ALA 46 -35.10 -38.46 19 A GLU 58 -38.91 -29.01 19 A PRO 76 -69.71 91.97 20 A SER 5 39.40 37.65 20 A ASN 40 -104.36 68.93 20 A LYS 41 -69.67 -70.05 20 A ASP 43 -32.66 96.10 Solution structure of J-domain from the DnaJ homolog, human Tid1 protein 1 N N A ASP 8 A ASP 8 HELX_P A GLY 14 A GLY 14 1 1 7 A SER 20 A SER 20 HELX_P A TYR 35 A TYR 35 1 2 16 A LYS 45 A LYS 45 HELX_P A ASP 62 A ASP 62 1 3 18 A ASP 62 A ASP 62 HELX_P A TYR 72 A TYR 72 1 4 11 APOPTOSIS, CHAPERONE DnaJ, J-domain, Tid1, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, APOPTOSIS, CHAPERONE DNJA3_HUMAN UNP 1 93 Q96EY1 93 159 2DN9 8 73 Q96EY1 A 1 8 73 1 cloning artifact GLY 1 2DN9 A Q96EY1 UNP 1 1 cloning artifact SER 2 2DN9 A Q96EY1 UNP 2 1 cloning artifact SER 3 2DN9 A Q96EY1 UNP 3 1 cloning artifact GLY 4 2DN9 A Q96EY1 UNP 4 1 cloning artifact SER 5 2DN9 A Q96EY1 UNP 5 1 cloning artifact SER 6 2DN9 A Q96EY1 UNP 6 1 cloning artifact GLY 7 2DN9 A Q96EY1 UNP 7 1 cloning artifact SER 74 2DN9 A Q96EY1 UNP 74 1 cloning artifact GLY 75 2DN9 A Q96EY1 UNP 75 1 cloning artifact PRO 76 2DN9 A Q96EY1 UNP 76 1 cloning artifact SER 77 2DN9 A Q96EY1 UNP 77 1 cloning artifact SER 78 2DN9 A Q96EY1 UNP 78 1 cloning artifact GLY 79 2DN9 A Q96EY1 UNP 79