data_2DQO # _entry.id 2DQO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DQO pdb_00002dqo 10.2210/pdb2dqo/pdb NDB AH0022 ? ? RCSB RCSB025729 ? ? WWPDB D_1000025729 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 479D ;Same hybrid duplex sequence but without the 5-(N-aminohexyl)carbamoyl-2'-O-methyluridine ; unspecified PDB 2DQP . unspecified PDB 2DQQ . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DQO _pdbx_database_status.recvd_initial_deposition_date 2006-05-29 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Juan, E.C.M.' 1 'Kondo, J.' 2 'Ito, T.' 3 'Ueno, Y.' 4 'Matsuda, A.' 5 'Takenaka, A.' 6 # _citation.id primary _citation.title ;Crystal structures of DNA:DNA and DNA:RNA duplexes containing 5-(N-aminohexyl)carbamoyl-modified uracils reveal the basis for properties as antigene and antisense molecules ; _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 35 _citation.page_first 1969 _citation.page_last 1977 _citation.year 2007 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17341465 _citation.pdbx_database_id_DOI 10.1093/nar/gkl821 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Juan, E.C.M.' 1 ? primary 'Kondo, J.' 2 ? primary 'Kurihara, T.' 3 ? primary 'Ito, T.' 4 ? primary 'Ueno, Y.' 5 ? primary 'Matsuda, A.' 6 ? primary 'Takenaka, A.' 7 ? # _cell.entry_id 2DQO _cell.length_a 51.400 _cell.length_b 51.400 _cell.length_c 44.200 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2DQO _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*DCP*(OMU)P*DCP*DTP*(OMU)P*DCP*DTP*DTP*DC)-3') ; 2664.734 1 ? ? ? ? 2 polymer syn ;RNA (5'-R(*GP*AP*AP*GP*AP*AP*GP*AP*G)-3') ; 2981.895 1 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 3 ? ? ? ? 4 non-polymer syn '(6-AMINOHEXYL)CARBAMIC ACID' 160.214 2 ? ? ? ? 5 non-polymer syn 'BARIUM ION' 137.327 2 ? ? ? ? 6 water nat water 18.015 66 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DC)(OMU)(DC)(DT)(OMU)(DC)(DT)(DT)(DC)' CUCTUCTTC A ? 2 polyribonucleotide no no GAAGAAGAG GAAGAAGAG B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 OMU n 1 3 DC n 1 4 DT n 1 5 OMU n 1 6 DC n 1 7 DT n 1 8 DT n 1 9 DC n 2 1 G n 2 2 A n 2 3 A n 2 4 G n 2 5 A n 2 6 A n 2 7 G n 2 8 A n 2 9 G n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? 'synthetic constructs' 2 1 sample ? ? ? ? ? 'synthetic constructs' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2DQO 1 'C(OMU)CT(OMU)CTTC' 1 2DQO ? 2 PDB 2DQO 2 GAAGAAGAG 10 2DQO ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2DQO A 1 ? 9 ? 2DQO 1 ? 9 ? 1 9 2 2 2DQO B 1 ? 9 ? 2DQO 10 ? 18 ? 10 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 BA non-polymer . 'BARIUM ION' ? 'Ba 2' 137.327 CMY non-polymer . '(6-AMINOHEXYL)CARBAMIC ACID' ? 'C7 H16 N2 O2' 160.214 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 OMU 'RNA linking' n ;O2'-METHYLURIDINE 5'-MONOPHOSPHATE ; ? 'C10 H15 N2 O9 P' 338.208 # _exptl.entry_id 2DQO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.95 _exptl_crystal.density_percent_sol 58.33 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details ;25mM sodium cacodylate, pH 7.0, 5mM spermine tetrahydrochloride, 50mM sodium chloride, 50mM barium chloride and 5% MPD, equilibrated against 35% (v/v) MPD, VAPOR DIFFUSION, HANGING DROP, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'sodium cacodylate' ? ? ? 1 2 1 'spermine tetrahydrochloride' ? ? ? 1 3 1 'sodium chloride' ? ? ? 1 4 1 'barium chloride' ? ? ? 1 5 1 MPD ? ? ? 1 6 1 HOH ? ? ? 1 7 2 'sodium cacodylate' ? ? ? 1 8 2 'sodium chloride' ? ? ? 1 9 2 'barium chloride' ? ? ? 1 10 2 MPD ? ? ? 1 11 2 HOH ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2002-10-26 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-18B' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-18B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 2DQO _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 2.300 _reflns.d_resolution_low 31.365 _reflns.number_all ? _reflns.number_obs 3021 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.059 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 8.3 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.42 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.219 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.3 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2DQO _refine.ls_d_res_high 2.3 _refine.ls_d_res_low 10 _refine.pdbx_ls_sigma_F 3.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 2987 _refine.ls_number_reflns_obs 2963 _refine.ls_number_reflns_R_free 282 _refine.ls_percent_reflns_obs 99.2 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.2161 _refine.ls_R_factor_R_free 0.2757 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB ENTRY 479D' _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Maximum Likelihood' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -0.224 _refine.aniso_B[1][2] -13.753 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][2] -0.224 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] 0.447 _refine.details ;The value of the item "Number reflections (observed)" is the number of reflections used in refinement. This value excludes the reflections that have sigma(F) less than 3.0. ; _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 374 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 66 _refine_hist.number_atoms_total 465 _refine_hist.d_res_high 2.3 _refine_hist.d_res_low 10 # _struct.entry_id 2DQO _struct.title ;Crystal Structure of d(CXCTXCTTC):r(gaagaagag) Where X is 5-(N-aminohexyl)carbamoyl-2'-O-methyluridine ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DQO _struct_keywords.pdbx_keywords 'DNA-RNA HYBRID' _struct_keywords.text ;modified nucleotide, 5-(N-aminohexyl)carbamoyl-2'-O-methyluridine, A-form RNA:DNA hybrid duplex, DNA-RNA HYBRID ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 3 ? I N N 3 ? J N N 6 ? K N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DC 1 "O3'" ? ? ? 1_555 A OMU 2 P ? ? A DC 1 A OMU 2 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale2 covale both ? A OMU 2 "O3'" ? ? ? 1_555 A DC 3 P ? ? A OMU 2 A DC 3 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale3 covale none ? A OMU 2 C5 ? ? ? 1_555 D CMY . C1Y ? ? A OMU 2 A CMY 102 1_555 ? ? ? ? ? ? ? 1.537 ? ? covale4 covale both ? A DT 4 "O3'" ? ? ? 1_555 A OMU 5 P ? ? A DT 4 A OMU 5 1_555 ? ? ? ? ? ? ? 1.611 ? ? covale5 covale both ? A OMU 5 "O3'" ? ? ? 1_555 A DC 6 P ? ? A OMU 5 A DC 6 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale6 covale none ? A OMU 5 C5 ? ? ? 1_555 E CMY . C1Y ? ? A OMU 5 A CMY 105 1_555 ? ? ? ? ? ? ? 1.538 ? ? metalc1 metalc ? ? A OMU 5 OP2 ? ? ? 1_555 C NA . NA ? ? A OMU 5 A NA 203 1_555 ? ? ? ? ? ? ? 2.663 ? ? metalc2 metalc ? ? E CMY . O1Y ? ? ? 1_555 C NA . NA ? ? A CMY 105 A NA 203 1_555 ? ? ? ? ? ? ? 2.763 ? ? metalc3 metalc ? ? C NA . NA ? ? ? 1_555 J HOH . O ? ? A NA 203 A HOH 206 1_555 ? ? ? ? ? ? ? 2.523 ? ? metalc4 metalc ? ? C NA . NA ? ? ? 1_555 J HOH . O ? ? A NA 203 A HOH 213 1_555 ? ? ? ? ? ? ? 2.797 ? ? metalc5 metalc ? ? H NA . NA ? ? ? 1_555 K HOH . O ? ? B NA 201 B HOH 211 1_555 ? ? ? ? ? ? ? 2.534 ? ? metalc6 metalc ? ? H NA . NA ? ? ? 1_555 K HOH . O ? ? B NA 201 B HOH 212 1_555 ? ? ? ? ? ? ? 2.941 ? ? metalc7 metalc ? ? H NA . NA ? ? ? 1_555 K HOH . O ? ? B NA 201 B HOH 217 1_555 ? ? ? ? ? ? ? 2.421 ? ? metalc8 metalc ? ? I NA . NA ? ? ? 1_555 K HOH . O ? ? B NA 202 B HOH 228 1_555 ? ? ? ? ? ? ? 2.768 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B G 9 N1 ? ? A DC 1 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B G 9 O6 ? ? A DC 1 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B G 9 N2 ? ? A DC 1 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A OMU 2 N3 ? ? ? 1_555 B A 8 N1 ? ? A OMU 2 B A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A OMU 2 O4 ? ? ? 1_555 B A 8 N6 ? ? A OMU 2 B A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B G 7 N1 ? ? A DC 3 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B G 7 O6 ? ? A DC 3 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B G 7 N2 ? ? A DC 3 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B A 6 N1 ? ? A DT 4 B A 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B A 6 N6 ? ? A DT 4 B A 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A OMU 5 N3 ? ? ? 1_555 B A 5 N1 ? ? A OMU 5 B A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A OMU 5 O4 ? ? ? 1_555 B A 5 N6 ? ? A OMU 5 B A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B G 4 N1 ? ? A DC 6 B G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B G 4 O6 ? ? A DC 6 B G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B G 4 N2 ? ? A DC 6 B G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B A 3 N1 ? ? A DT 7 B A 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B A 3 N6 ? ? A DT 7 B A 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B A 2 N1 ? ? A DT 8 B A 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B A 2 N6 ? ? A DT 8 B A 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B G 1 N1 ? ? A DC 9 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B G 1 O6 ? ? A DC 9 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B G 1 N2 ? ? A DC 9 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NA 203 ? 4 'BINDING SITE FOR RESIDUE NA A 203' AC2 Software B BA 101 ? 7 'BINDING SITE FOR RESIDUE BA B 101' AC3 Software B BA 102 ? 2 'BINDING SITE FOR RESIDUE BA B 102' AC4 Software B NA 201 ? 4 'BINDING SITE FOR RESIDUE NA B 201' AC5 Software B NA 202 ? 3 'BINDING SITE FOR RESIDUE NA B 202' AC6 Software A CMY 102 ? 3 'BINDING SITE FOR RESIDUE CMY A 102' AC7 Software A CMY 105 ? 6 'BINDING SITE FOR RESIDUE CMY A 105' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 OMU A 5 ? OMU A 5 . ? 1_555 ? 2 AC1 4 CMY E . ? CMY A 105 . ? 1_555 ? 3 AC1 4 HOH J . ? HOH A 206 . ? 1_555 ? 4 AC1 4 HOH J . ? HOH A 213 . ? 1_555 ? 5 AC2 7 HOH J . ? HOH A 232 . ? 1_555 ? 6 AC2 7 A B 3 ? A B 12 . ? 1_555 ? 7 AC2 7 G B 4 ? G B 13 . ? 1_555 ? 8 AC2 7 HOH K . ? HOH B 216 . ? 1_555 ? 9 AC2 7 HOH K . ? HOH B 220 . ? 1_555 ? 10 AC2 7 HOH K . ? HOH B 221 . ? 1_555 ? 11 AC2 7 HOH K . ? HOH B 227 . ? 1_555 ? 12 AC3 2 A B 8 ? A B 17 . ? 1_555 ? 13 AC3 2 HOH K . ? HOH B 218 . ? 1_555 ? 14 AC4 4 A B 6 ? A B 15 . ? 1_555 ? 15 AC4 4 HOH K . ? HOH B 211 . ? 1_555 ? 16 AC4 4 HOH K . ? HOH B 212 . ? 1_555 ? 17 AC4 4 HOH K . ? HOH B 217 . ? 1_555 ? 18 AC5 3 HOH J . ? HOH A 216 . ? 3_654 ? 19 AC5 3 HOH J . ? HOH A 224 . ? 3_654 ? 20 AC5 3 HOH K . ? HOH B 228 . ? 1_555 ? 21 AC6 3 DC A 1 ? DC A 1 . ? 1_555 ? 22 AC6 3 OMU A 2 ? OMU A 2 . ? 1_555 ? 23 AC6 3 A B 8 ? A B 17 . ? 1_555 ? 24 AC7 6 DT A 4 ? DT A 4 . ? 1_555 ? 25 AC7 6 OMU A 5 ? OMU A 5 . ? 1_555 ? 26 AC7 6 NA C . ? NA A 203 . ? 1_555 ? 27 AC7 6 HOH J . ? HOH A 206 . ? 1_555 ? 28 AC7 6 HOH J . ? HOH A 232 . ? 1_555 ? 29 AC7 6 A B 2 ? A B 11 . ? 1_555 ? # _database_PDB_matrix.entry_id 2DQO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2DQO _atom_sites.fract_transf_matrix[1][1] 0.019455 _atom_sites.fract_transf_matrix[1][2] 0.011232 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022465 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022624 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BA C N NA O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DC A 1 1 ? 27.705 5.980 -13.015 1.00 42.57 ? 1 DC A "O5'" 1 ATOM 2 C "C5'" . DC A 1 1 ? 26.975 6.095 -14.242 1.00 38.35 ? 1 DC A "C5'" 1 ATOM 3 C "C4'" . DC A 1 1 ? 26.287 4.814 -14.652 1.00 35.50 ? 1 DC A "C4'" 1 ATOM 4 O "O4'" . DC A 1 1 ? 27.258 3.772 -14.890 1.00 36.33 ? 1 DC A "O4'" 1 ATOM 5 C "C3'" . DC A 1 1 ? 25.342 4.221 -13.619 1.00 34.30 ? 1 DC A "C3'" 1 ATOM 6 O "O3'" . DC A 1 1 ? 24.050 4.812 -13.709 1.00 33.19 ? 1 DC A "O3'" 1 ATOM 7 C "C2'" . DC A 1 1 ? 25.306 2.761 -14.028 1.00 35.14 ? 1 DC A "C2'" 1 ATOM 8 C "C1'" . DC A 1 1 ? 26.756 2.518 -14.427 1.00 35.01 ? 1 DC A "C1'" 1 ATOM 9 N N1 . DC A 1 1 ? 27.612 2.071 -13.313 1.00 34.75 ? 1 DC A N1 1 ATOM 10 C C2 . DC A 1 1 ? 27.429 0.786 -12.799 1.00 34.02 ? 1 DC A C2 1 ATOM 11 O O2 . DC A 1 1 ? 26.547 0.071 -13.286 1.00 35.29 ? 1 DC A O2 1 ATOM 12 N N3 . DC A 1 1 ? 28.213 0.358 -11.785 1.00 33.36 ? 1 DC A N3 1 ATOM 13 C C4 . DC A 1 1 ? 29.151 1.163 -11.285 1.00 35.06 ? 1 DC A C4 1 ATOM 14 N N4 . DC A 1 1 ? 29.902 0.700 -10.282 1.00 36.53 ? 1 DC A N4 1 ATOM 15 C C5 . DC A 1 1 ? 29.360 2.482 -11.788 1.00 34.51 ? 1 DC A C5 1 ATOM 16 C C6 . DC A 1 1 ? 28.574 2.891 -12.791 1.00 33.86 ? 1 DC A C6 1 HETATM 17 N N1 . OMU A 1 2 ? 24.446 -0.320 -10.417 1.00 32.91 ? 2 OMU A N1 1 HETATM 18 C C2 . OMU A 1 2 ? 24.840 -1.281 -9.534 1.00 30.43 ? 2 OMU A C2 1 HETATM 19 N N3 . OMU A 1 2 ? 25.830 -0.894 -8.678 1.00 28.91 ? 2 OMU A N3 1 HETATM 20 C C4 . OMU A 1 2 ? 26.440 0.342 -8.605 1.00 32.69 ? 2 OMU A C4 1 HETATM 21 C C5 . OMU A 1 2 ? 25.941 1.362 -9.526 1.00 34.29 ? 2 OMU A C5 1 HETATM 22 C C6 . OMU A 1 2 ? 24.961 0.959 -10.360 1.00 32.48 ? 2 OMU A C6 1 HETATM 23 O O2 . OMU A 1 2 ? 24.344 -2.386 -9.505 1.00 28.84 ? 2 OMU A O2 1 HETATM 24 O O4 . OMU A 1 2 ? 27.347 0.519 -7.794 1.00 31.03 ? 2 OMU A O4 1 HETATM 25 C "C1'" . OMU A 1 2 ? 23.481 -0.725 -11.461 1.00 32.27 ? 2 OMU A "C1'" 1 HETATM 26 C "C2'" . OMU A 1 2 ? 22.030 -0.839 -10.988 1.00 31.38 ? 2 OMU A "C2'" 1 HETATM 27 O "O2'" . OMU A 1 2 ? 21.347 -1.837 -11.739 1.00 32.98 ? 2 OMU A "O2'" 1 HETATM 28 C CM2 . OMU A 1 2 ? 21.700 -3.205 -11.483 1.00 31.17 ? 2 OMU A CM2 1 HETATM 29 C "C3'" . OMU A 1 2 ? 21.521 0.554 -11.322 1.00 32.49 ? 2 OMU A "C3'" 1 HETATM 30 C "C4'" . OMU A 1 2 ? 22.171 0.780 -12.679 1.00 31.48 ? 2 OMU A "C4'" 1 HETATM 31 O "O3'" . OMU A 1 2 ? 20.101 0.581 -11.394 1.00 30.71 ? 2 OMU A "O3'" 1 HETATM 32 O "O4'" . OMU A 1 2 ? 23.504 0.236 -12.503 1.00 33.41 ? 2 OMU A "O4'" 1 HETATM 33 C "C5'" . OMU A 1 2 ? 22.264 2.190 -13.193 1.00 31.68 ? 2 OMU A "C5'" 1 HETATM 34 O "O5'" . OMU A 1 2 ? 22.981 3.020 -12.288 1.00 32.14 ? 2 OMU A "O5'" 1 HETATM 35 P P . OMU A 1 2 ? 23.004 4.601 -12.512 1.00 34.26 ? 2 OMU A P 1 HETATM 36 O OP1 . OMU A 1 2 ? 21.664 4.974 -13.028 1.00 30.20 ? 2 OMU A OP1 1 HETATM 37 O OP2 . OMU A 1 2 ? 23.552 5.266 -11.297 1.00 32.87 ? 2 OMU A OP2 1 ATOM 38 P P . DC A 1 3 ? 19.259 1.099 -10.131 1.00 32.37 ? 3 DC A P 1 ATOM 39 O OP1 . DC A 1 3 ? 17.864 1.307 -10.583 1.00 32.86 ? 3 DC A OP1 1 ATOM 40 O OP2 . DC A 1 3 ? 20.014 2.216 -9.509 1.00 33.41 ? 3 DC A OP2 1 ATOM 41 O "O5'" . DC A 1 3 ? 19.280 -0.123 -9.112 1.00 33.86 ? 3 DC A "O5'" 1 ATOM 42 C "C5'" . DC A 1 3 ? 18.607 -1.341 -9.416 1.00 30.40 ? 3 DC A "C5'" 1 ATOM 43 C "C4'" . DC A 1 3 ? 18.939 -2.386 -8.378 1.00 31.24 ? 3 DC A "C4'" 1 ATOM 44 O "O4'" . DC A 1 3 ? 20.365 -2.598 -8.355 1.00 29.20 ? 3 DC A "O4'" 1 ATOM 45 C "C3'" . DC A 1 3 ? 18.595 -2.023 -6.936 1.00 30.74 ? 3 DC A "C3'" 1 ATOM 46 O "O3'" . DC A 1 3 ? 17.228 -2.327 -6.643 1.00 31.88 ? 3 DC A "O3'" 1 ATOM 47 C "C2'" . DC A 1 3 ? 19.513 -2.941 -6.156 1.00 30.64 ? 3 DC A "C2'" 1 ATOM 48 C "C1'" . DC A 1 3 ? 20.754 -3.000 -7.041 1.00 30.44 ? 3 DC A "C1'" 1 ATOM 49 N N1 . DC A 1 3 ? 21.815 -2.102 -6.582 1.00 30.10 ? 3 DC A N1 1 ATOM 50 C C2 . DC A 1 3 ? 22.649 -2.545 -5.561 1.00 31.38 ? 3 DC A C2 1 ATOM 51 O O2 . DC A 1 3 ? 22.450 -3.670 -5.081 1.00 31.45 ? 3 DC A O2 1 ATOM 52 N N3 . DC A 1 3 ? 23.645 -1.743 -5.120 1.00 28.83 ? 3 DC A N3 1 ATOM 53 C C4 . DC A 1 3 ? 23.816 -0.536 -5.662 1.00 28.81 ? 3 DC A C4 1 ATOM 54 N N4 . DC A 1 3 ? 24.818 0.217 -5.200 1.00 27.20 ? 3 DC A N4 1 ATOM 55 C C5 . DC A 1 3 ? 22.968 -0.050 -6.704 1.00 29.87 ? 3 DC A C5 1 ATOM 56 C C6 . DC A 1 3 ? 21.989 -0.861 -7.131 1.00 29.35 ? 3 DC A C6 1 ATOM 57 P P . DT A 1 4 ? 16.534 -1.709 -5.329 1.00 30.46 ? 4 DT A P 1 ATOM 58 O OP1 . DT A 1 4 ? 15.081 -2.005 -5.451 1.00 31.47 ? 4 DT A OP1 1 ATOM 59 O OP2 . DT A 1 4 ? 16.976 -0.300 -5.176 1.00 33.53 ? 4 DT A OP2 1 ATOM 60 O "O5'" . DT A 1 4 ? 17.165 -2.534 -4.117 1.00 28.12 ? 4 DT A "O5'" 1 ATOM 61 C "C5'" . DT A 1 4 ? 16.929 -3.927 -3.965 1.00 27.28 ? 4 DT A "C5'" 1 ATOM 62 C "C4'" . DT A 1 4 ? 17.764 -4.486 -2.834 1.00 28.11 ? 4 DT A "C4'" 1 ATOM 63 O "O4'" . DT A 1 4 ? 19.168 -4.313 -3.125 1.00 26.23 ? 4 DT A "O4'" 1 ATOM 64 C "C3'" . DT A 1 4 ? 17.566 -3.853 -1.459 1.00 28.94 ? 4 DT A "C3'" 1 ATOM 65 O "O3'" . DT A 1 4 ? 16.496 -4.504 -0.758 1.00 32.80 ? 4 DT A "O3'" 1 ATOM 66 C "C2'" . DT A 1 4 ? 18.890 -4.143 -0.772 1.00 26.66 ? 4 DT A "C2'" 1 ATOM 67 C "C1'" . DT A 1 4 ? 19.902 -4.147 -1.915 1.00 25.03 ? 4 DT A "C1'" 1 ATOM 68 N N1 . DT A 1 4 ? 20.690 -2.903 -2.034 1.00 25.49 ? 4 DT A N1 1 ATOM 69 C C2 . DT A 1 4 ? 21.772 -2.735 -1.209 1.00 23.80 ? 4 DT A C2 1 ATOM 70 O O2 . DT A 1 4 ? 22.094 -3.541 -0.355 1.00 25.34 ? 4 DT A O2 1 ATOM 71 N N3 . DT A 1 4 ? 22.463 -1.575 -1.413 1.00 22.62 ? 4 DT A N3 1 ATOM 72 C C4 . DT A 1 4 ? 22.185 -0.584 -2.330 1.00 22.71 ? 4 DT A C4 1 ATOM 73 O O4 . DT A 1 4 ? 22.918 0.397 -2.400 1.00 21.17 ? 4 DT A O4 1 ATOM 74 C C5 . DT A 1 4 ? 21.012 -0.799 -3.163 1.00 25.26 ? 4 DT A C5 1 ATOM 75 C C7 . DT A 1 4 ? 20.616 0.231 -4.176 1.00 24.12 ? 4 DT A C7 1 ATOM 76 C C6 . DT A 1 4 ? 20.340 -1.945 -2.962 1.00 24.18 ? 4 DT A C6 1 HETATM 77 N N1 . OMU A 1 5 ? 20.692 -1.668 2.348 1.00 28.62 ? 5 OMU A N1 1 HETATM 78 C C2 . OMU A 1 5 ? 21.840 -0.963 2.574 1.00 28.60 ? 5 OMU A C2 1 HETATM 79 N N3 . OMU A 1 5 ? 21.982 0.150 1.799 1.00 28.00 ? 5 OMU A N3 1 HETATM 80 C C4 . OMU A 1 5 ? 21.102 0.631 0.848 1.00 30.26 ? 5 OMU A C4 1 HETATM 81 C C5 . OMU A 1 5 ? 19.881 -0.140 0.648 1.00 29.45 ? 5 OMU A C5 1 HETATM 82 C C6 . OMU A 1 5 ? 19.764 -1.250 1.411 1.00 28.41 ? 5 OMU A C6 1 HETATM 83 O O2 . OMU A 1 5 ? 22.671 -1.289 3.404 1.00 29.89 ? 5 OMU A O2 1 HETATM 84 O O4 . OMU A 1 5 ? 21.379 1.664 0.226 1.00 29.24 ? 5 OMU A O4 1 HETATM 85 C "C1'" . OMU A 1 5 ? 20.493 -2.890 3.160 1.00 30.18 ? 5 OMU A "C1'" 1 HETATM 86 C "C2'" . OMU A 1 5 ? 19.766 -2.619 4.483 1.00 31.24 ? 5 OMU A "C2'" 1 HETATM 87 O "O2'" . OMU A 1 5 ? 20.220 -3.510 5.481 1.00 31.48 ? 5 OMU A "O2'" 1 HETATM 88 C CM2 . OMU A 1 5 ? 21.500 -3.240 6.049 1.00 28.66 ? 5 OMU A CM2 1 HETATM 89 C "C3'" . OMU A 1 5 ? 18.327 -2.925 4.094 1.00 32.54 ? 5 OMU A "C3'" 1 HETATM 90 C "C4'" . OMU A 1 5 ? 18.524 -4.150 3.220 1.00 30.95 ? 5 OMU A "C4'" 1 HETATM 91 O "O3'" . OMU A 1 5 ? 17.558 -3.237 5.247 1.00 34.55 ? 5 OMU A "O3'" 1 HETATM 92 O "O4'" . OMU A 1 5 ? 19.694 -3.812 2.435 1.00 31.30 ? 5 OMU A "O4'" 1 HETATM 93 C "C5'" . OMU A 1 5 ? 17.386 -4.586 2.327 1.00 32.64 ? 5 OMU A "C5'" 1 HETATM 94 O "O5'" . OMU A 1 5 ? 16.916 -3.509 1.532 1.00 32.47 ? 5 OMU A "O5'" 1 HETATM 95 P P . OMU A 1 5 ? 15.759 -3.752 0.461 1.00 35.57 ? 5 OMU A P 1 HETATM 96 O OP1 . OMU A 1 5 ? 14.807 -4.722 1.056 1.00 36.92 ? 5 OMU A OP1 1 HETATM 97 O OP2 . OMU A 1 5 ? 15.260 -2.435 -0.019 1.00 35.39 ? 5 OMU A OP2 1 ATOM 98 P P . DC A 1 6 ? 16.801 -2.063 6.041 1.00 33.54 ? 6 DC A P 1 ATOM 99 O OP1 . DC A 1 6 ? 15.980 -2.730 7.082 1.00 35.87 ? 6 DC A OP1 1 ATOM 100 O OP2 . DC A 1 6 ? 16.153 -1.147 5.075 1.00 34.64 ? 6 DC A OP2 1 ATOM 101 O "O5'" . DC A 1 6 ? 17.979 -1.268 6.752 1.00 30.99 ? 6 DC A "O5'" 1 ATOM 102 C "C5'" . DC A 1 6 ? 18.673 -1.831 7.856 1.00 26.26 ? 6 DC A "C5'" 1 ATOM 103 C "C4'" . DC A 1 6 ? 19.718 -0.865 8.362 1.00 27.09 ? 6 DC A "C4'" 1 ATOM 104 O "O4'" . DC A 1 6 ? 20.726 -0.637 7.356 1.00 23.84 ? 6 DC A "O4'" 1 ATOM 105 C "C3'" . DC A 1 6 ? 19.235 0.537 8.710 1.00 24.92 ? 6 DC A "C3'" 1 ATOM 106 O "O3'" . DC A 1 6 ? 18.587 0.567 9.986 1.00 27.95 ? 6 DC A "O3'" 1 ATOM 107 C "C2'" . DC A 1 6 ? 20.544 1.296 8.733 1.00 23.93 ? 6 DC A "C2'" 1 ATOM 108 C "C1'" . DC A 1 6 ? 21.293 0.659 7.558 1.00 24.55 ? 6 DC A "C1'" 1 ATOM 109 N N1 . DC A 1 6 ? 21.160 1.423 6.305 1.00 19.67 ? 6 DC A N1 1 ATOM 110 C C2 . DC A 1 6 ? 21.967 2.519 6.138 1.00 18.90 ? 6 DC A C2 1 ATOM 111 O O2 . DC A 1 6 ? 22.773 2.780 7.027 1.00 21.24 ? 6 DC A O2 1 ATOM 112 N N3 . DC A 1 6 ? 21.861 3.273 5.018 1.00 18.28 ? 6 DC A N3 1 ATOM 113 C C4 . DC A 1 6 ? 20.975 2.945 4.080 1.00 17.94 ? 6 DC A C4 1 ATOM 114 N N4 . DC A 1 6 ? 20.889 3.733 2.991 1.00 16.42 ? 6 DC A N4 1 ATOM 115 C C5 . DC A 1 6 ? 20.133 1.803 4.216 1.00 16.70 ? 6 DC A C5 1 ATOM 116 C C6 . DC A 1 6 ? 20.258 1.076 5.339 1.00 17.61 ? 6 DC A C6 1 ATOM 117 P P . DT A 1 7 ? 17.359 1.579 10.227 1.00 29.32 ? 7 DT A P 1 ATOM 118 O OP1 . DT A 1 7 ? 16.547 1.041 11.351 1.00 31.83 ? 7 DT A OP1 1 ATOM 119 O OP2 . DT A 1 7 ? 16.720 1.821 8.912 1.00 31.11 ? 7 DT A OP2 1 ATOM 120 O "O5'" . DT A 1 7 ? 18.054 2.933 10.680 1.00 26.88 ? 7 DT A "O5'" 1 ATOM 121 C "C5'" . DT A 1 7 ? 18.954 2.962 11.776 1.00 24.94 ? 7 DT A "C5'" 1 ATOM 122 C "C4'" . DT A 1 7 ? 19.784 4.222 11.730 1.00 26.66 ? 7 DT A "C4'" 1 ATOM 123 O "O4'" . DT A 1 7 ? 20.678 4.189 10.598 1.00 28.28 ? 7 DT A "O4'" 1 ATOM 124 C "C3'" . DT A 1 7 ? 19.011 5.525 11.554 1.00 27.78 ? 7 DT A "C3'" 1 ATOM 125 O "O3'" . DT A 1 7 ? 18.488 5.990 12.800 1.00 30.36 ? 7 DT A "O3'" 1 ATOM 126 C "C2'" . DT A 1 7 ? 20.091 6.455 11.041 1.00 27.17 ? 7 DT A "C2'" 1 ATOM 127 C "C1'" . DT A 1 7 ? 20.933 5.526 10.156 1.00 29.99 ? 7 DT A "C1'" 1 ATOM 128 N N1 . DT A 1 7 ? 20.571 5.613 8.726 1.00 29.07 ? 7 DT A N1 1 ATOM 129 C C2 . DT A 1 7 ? 21.252 6.509 7.941 1.00 28.64 ? 7 DT A C2 1 ATOM 130 O O2 . DT A 1 7 ? 22.147 7.231 8.365 1.00 27.63 ? 7 DT A O2 1 ATOM 131 N N3 . DT A 1 7 ? 20.837 6.543 6.637 1.00 28.02 ? 7 DT A N3 1 ATOM 132 C C4 . DT A 1 7 ? 19.826 5.801 6.058 1.00 28.21 ? 7 DT A C4 1 ATOM 133 O O4 . DT A 1 7 ? 19.557 5.962 4.872 1.00 27.37 ? 7 DT A O4 1 ATOM 134 C C5 . DT A 1 7 ? 19.144 4.870 6.931 1.00 28.94 ? 7 DT A C5 1 ATOM 135 C C7 . DT A 1 7 ? 18.028 4.033 6.395 1.00 29.84 ? 7 DT A C7 1 ATOM 136 C C6 . DT A 1 7 ? 19.566 4.827 8.207 1.00 29.59 ? 7 DT A C6 1 ATOM 137 P P . DT A 1 8 ? 17.307 7.089 12.811 1.00 31.11 ? 8 DT A P 1 ATOM 138 O OP1 . DT A 1 8 ? 17.033 7.399 14.234 1.00 31.96 ? 8 DT A OP1 1 ATOM 139 O OP2 . DT A 1 8 ? 16.196 6.639 11.935 1.00 30.61 ? 8 DT A OP2 1 ATOM 140 O "O5'" . DT A 1 8 ? 17.984 8.373 12.161 1.00 26.12 ? 8 DT A "O5'" 1 ATOM 141 C "C5'" . DT A 1 8 ? 19.036 9.047 12.836 1.00 25.03 ? 8 DT A "C5'" 1 ATOM 142 C "C4'" . DT A 1 8 ? 19.600 10.136 11.957 1.00 26.14 ? 8 DT A "C4'" 1 ATOM 143 O "O4'" . DT A 1 8 ? 20.053 9.548 10.723 1.00 25.37 ? 8 DT A "O4'" 1 ATOM 144 C "C3'" . DT A 1 8 ? 18.597 11.202 11.529 1.00 26.34 ? 8 DT A "C3'" 1 ATOM 145 O "O3'" . DT A 1 8 ? 18.594 12.248 12.498 1.00 28.11 ? 8 DT A "O3'" 1 ATOM 146 C "C2'" . DT A 1 8 ? 19.196 11.712 10.233 1.00 24.06 ? 8 DT A "C2'" 1 ATOM 147 C "C1'" . DT A 1 8 ? 19.936 10.496 9.673 1.00 24.02 ? 8 DT A "C1'" 1 ATOM 148 N N1 . DT A 1 8 ? 19.237 9.843 8.564 1.00 21.25 ? 8 DT A N1 1 ATOM 149 C C2 . DT A 1 8 ? 19.555 10.242 7.304 1.00 22.07 ? 8 DT A C2 1 ATOM 150 O O2 . DT A 1 8 ? 20.376 11.112 7.076 1.00 22.01 ? 8 DT A O2 1 ATOM 151 N N3 . DT A 1 8 ? 18.871 9.590 6.313 1.00 22.32 ? 8 DT A N3 1 ATOM 152 C C4 . DT A 1 8 ? 17.910 8.611 6.468 1.00 20.68 ? 8 DT A C4 1 ATOM 153 O O4 . DT A 1 8 ? 17.371 8.132 5.481 1.00 21.58 ? 8 DT A O4 1 ATOM 154 C C5 . DT A 1 8 ? 17.608 8.231 7.830 1.00 19.17 ? 8 DT A C5 1 ATOM 155 C C7 . DT A 1 8 ? 16.577 7.186 8.097 1.00 20.37 ? 8 DT A C7 1 ATOM 156 C C6 . DT A 1 8 ? 18.294 8.867 8.792 1.00 21.11 ? 8 DT A C6 1 ATOM 157 P P . DC A 1 9 ? 17.275 13.128 12.724 1.00 28.84 ? 9 DC A P 1 ATOM 158 O OP1 . DC A 1 9 ? 17.569 13.975 13.908 1.00 30.61 ? 9 DC A OP1 1 ATOM 159 O OP2 . DC A 1 9 ? 16.063 12.275 12.708 1.00 24.79 ? 9 DC A OP2 1 ATOM 160 O "O5'" . DC A 1 9 ? 17.222 14.064 11.442 1.00 28.76 ? 9 DC A "O5'" 1 ATOM 161 C "C5'" . DC A 1 9 ? 18.243 15.016 11.186 1.00 27.14 ? 9 DC A "C5'" 1 ATOM 162 C "C4'" . DC A 1 9 ? 18.025 15.615 9.822 1.00 27.43 ? 9 DC A "C4'" 1 ATOM 163 O "O4'" . DC A 1 9 ? 18.085 14.538 8.878 1.00 27.05 ? 9 DC A "O4'" 1 ATOM 164 C "C3'" . DC A 1 9 ? 16.624 16.195 9.644 1.00 27.58 ? 9 DC A "C3'" 1 ATOM 165 O "O3'" . DC A 1 9 ? 16.575 17.565 10.045 1.00 29.81 ? 9 DC A "O3'" 1 ATOM 166 C "C2'" . DC A 1 9 ? 16.295 15.919 8.186 1.00 25.72 ? 9 DC A "C2'" 1 ATOM 167 C "C1'" . DC A 1 9 ? 17.353 14.916 7.727 1.00 25.28 ? 9 DC A "C1'" 1 ATOM 168 N N1 . DC A 1 9 ? 16.807 13.693 7.122 1.00 25.63 ? 9 DC A N1 1 ATOM 169 C C2 . DC A 1 9 ? 16.689 13.628 5.736 1.00 26.15 ? 9 DC A C2 1 ATOM 170 O O2 . DC A 1 9 ? 17.059 14.605 5.059 1.00 27.84 ? 9 DC A O2 1 ATOM 171 N N3 . DC A 1 9 ? 16.179 12.513 5.170 1.00 25.05 ? 9 DC A N3 1 ATOM 172 C C4 . DC A 1 9 ? 15.797 11.491 5.940 1.00 26.23 ? 9 DC A C4 1 ATOM 173 N N4 . DC A 1 9 ? 15.293 10.409 5.344 1.00 27.58 ? 9 DC A N4 1 ATOM 174 C C5 . DC A 1 9 ? 15.913 11.531 7.356 1.00 23.28 ? 9 DC A C5 1 ATOM 175 C C6 . DC A 1 9 ? 16.417 12.639 7.899 1.00 24.38 ? 9 DC A C6 1 ATOM 176 O "O5'" . G B 2 1 ? 13.917 11.153 -4.279 1.00 48.56 ? 10 G B "O5'" 1 ATOM 177 C "C5'" . G B 2 1 ? 14.138 12.207 -5.226 1.00 47.09 ? 10 G B "C5'" 1 ATOM 178 C "C4'" . G B 2 1 ? 14.758 13.430 -4.592 1.00 45.16 ? 10 G B "C4'" 1 ATOM 179 O "O4'" . G B 2 1 ? 13.931 13.859 -3.471 1.00 43.34 ? 10 G B "O4'" 1 ATOM 180 C "C3'" . G B 2 1 ? 16.131 13.212 -3.979 1.00 44.02 ? 10 G B "C3'" 1 ATOM 181 O "O3'" . G B 2 1 ? 17.184 13.294 -4.930 1.00 43.31 ? 10 G B "O3'" 1 ATOM 182 C "C2'" . G B 2 1 ? 16.188 14.311 -2.927 1.00 42.96 ? 10 G B "C2'" 1 ATOM 183 O "O2'" . G B 2 1 ? 16.480 15.589 -3.456 1.00 41.41 ? 10 G B "O2'" 1 ATOM 184 C "C1'" . G B 2 1 ? 14.757 14.271 -2.393 1.00 41.62 ? 10 G B "C1'" 1 ATOM 185 N N9 . G B 2 1 ? 14.600 13.302 -1.312 1.00 39.52 ? 10 G B N9 1 ATOM 186 C C8 . G B 2 1 ? 13.932 12.101 -1.368 1.00 36.05 ? 10 G B C8 1 ATOM 187 N N7 . G B 2 1 ? 13.973 11.439 -0.242 1.00 35.45 ? 10 G B N7 1 ATOM 188 C C5 . G B 2 1 ? 14.711 12.251 0.611 1.00 34.90 ? 10 G B C5 1 ATOM 189 C C6 . G B 2 1 ? 15.094 12.056 1.966 1.00 33.43 ? 10 G B C6 1 ATOM 190 O O6 . G B 2 1 ? 14.848 11.100 2.701 1.00 33.34 ? 10 G B O6 1 ATOM 191 N N1 . G B 2 1 ? 15.837 13.126 2.449 1.00 31.34 ? 10 G B N1 1 ATOM 192 C C2 . G B 2 1 ? 16.172 14.245 1.725 1.00 34.35 ? 10 G B C2 1 ATOM 193 N N2 . G B 2 1 ? 16.890 15.173 2.375 1.00 33.86 ? 10 G B N2 1 ATOM 194 N N3 . G B 2 1 ? 15.827 14.440 0.457 1.00 34.30 ? 10 G B N3 1 ATOM 195 C C4 . G B 2 1 ? 15.102 13.409 -0.031 1.00 36.50 ? 10 G B C4 1 ATOM 196 P P . A B 2 2 ? 18.520 12.427 -4.700 1.00 42.59 ? 11 A B P 1 ATOM 197 O OP1 . A B 2 2 ? 19.431 12.646 -5.847 1.00 43.31 ? 11 A B OP1 1 ATOM 198 O OP2 . A B 2 2 ? 18.093 11.043 -4.354 1.00 43.15 ? 11 A B OP2 1 ATOM 199 O "O5'" . A B 2 2 ? 19.186 13.091 -3.415 1.00 40.88 ? 11 A B "O5'" 1 ATOM 200 C "C5'" . A B 2 2 ? 19.555 14.465 -3.416 1.00 40.35 ? 11 A B "C5'" 1 ATOM 201 C "C4'" . A B 2 2 ? 20.090 14.863 -2.061 1.00 40.42 ? 11 A B "C4'" 1 ATOM 202 O "O4'" . A B 2 2 ? 19.051 14.731 -1.052 1.00 39.96 ? 11 A B "O4'" 1 ATOM 203 C "C3'" . A B 2 2 ? 21.232 14.017 -1.528 1.00 39.70 ? 11 A B "C3'" 1 ATOM 204 O "O3'" . A B 2 2 ? 22.466 14.462 -2.073 1.00 42.56 ? 11 A B "O3'" 1 ATOM 205 C "C2'" . A B 2 2 ? 21.143 14.287 -0.034 1.00 38.33 ? 11 A B "C2'" 1 ATOM 206 O "O2'" . A B 2 2 ? 21.672 15.554 0.300 1.00 37.67 ? 11 A B "O2'" 1 ATOM 207 C "C1'" . A B 2 2 ? 19.628 14.310 0.173 1.00 38.83 ? 11 A B "C1'" 1 ATOM 208 N N9 . A B 2 2 ? 19.059 13.009 0.523 1.00 37.79 ? 11 A B N9 1 ATOM 209 C C8 . A B 2 2 ? 18.350 12.164 -0.290 1.00 37.22 ? 11 A B C8 1 ATOM 210 N N7 . A B 2 2 ? 17.947 11.068 0.307 1.00 38.19 ? 11 A B N7 1 ATOM 211 C C5 . A B 2 2 ? 18.432 11.195 1.602 1.00 38.25 ? 11 A B C5 1 ATOM 212 C C6 . A B 2 2 ? 18.350 10.358 2.732 1.00 37.87 ? 11 A B C6 1 ATOM 213 N N6 . A B 2 2 ? 17.734 9.176 2.734 1.00 38.37 ? 11 A B N6 1 ATOM 214 N N1 . A B 2 2 ? 18.936 10.780 3.872 1.00 38.55 ? 11 A B N1 1 ATOM 215 C C2 . A B 2 2 ? 19.566 11.961 3.867 1.00 38.58 ? 11 A B C2 1 ATOM 216 N N3 . A B 2 2 ? 19.718 12.834 2.868 1.00 40.08 ? 11 A B N3 1 ATOM 217 C C4 . A B 2 2 ? 19.120 12.386 1.750 1.00 38.45 ? 11 A B C4 1 ATOM 218 P P . A B 2 3 ? 23.677 13.422 -2.262 1.00 40.47 ? 12 A B P 1 ATOM 219 O OP1 . A B 2 3 ? 24.694 14.085 -3.121 1.00 41.38 ? 12 A B OP1 1 ATOM 220 O OP2 . A B 2 3 ? 23.116 12.106 -2.666 1.00 40.04 ? 12 A B OP2 1 ATOM 221 O "O5'" . A B 2 3 ? 24.277 13.289 -0.797 1.00 41.00 ? 12 A B "O5'" 1 ATOM 222 C "C5'" . A B 2 3 ? 24.794 14.424 -0.118 1.00 40.54 ? 12 A B "C5'" 1 ATOM 223 C "C4'" . A B 2 3 ? 25.120 14.061 1.305 1.00 41.80 ? 12 A B "C4'" 1 ATOM 224 O "O4'" . A B 2 3 ? 23.890 13.817 2.043 1.00 41.68 ? 12 A B "O4'" 1 ATOM 225 C "C3'" . A B 2 3 ? 25.894 12.766 1.484 1.00 41.90 ? 12 A B "C3'" 1 ATOM 226 O "O3'" . A B 2 3 ? 27.283 12.927 1.219 1.00 41.94 ? 12 A B "O3'" 1 ATOM 227 C "C2'" . A B 2 3 ? 25.590 12.435 2.939 1.00 40.68 ? 12 A B "C2'" 1 ATOM 228 O "O2'" . A B 2 3 ? 26.311 13.250 3.839 1.00 41.65 ? 12 A B "O2'" 1 ATOM 229 C "C1'" . A B 2 3 ? 24.111 12.810 3.017 1.00 39.58 ? 12 A B "C1'" 1 ATOM 230 N N9 . A B 2 3 ? 23.229 11.683 2.721 1.00 38.40 ? 12 A B N9 1 ATOM 231 C C8 . A B 2 3 ? 22.685 11.321 1.514 1.00 37.35 ? 12 A B C8 1 ATOM 232 N N7 . A B 2 3 ? 21.915 10.261 1.579 1.00 36.89 ? 12 A B N7 1 ATOM 233 C C5 . A B 2 3 ? 21.959 9.901 2.918 1.00 36.50 ? 12 A B C5 1 ATOM 234 C C6 . A B 2 3 ? 21.343 8.867 3.640 1.00 36.54 ? 12 A B C6 1 ATOM 235 N N6 . A B 2 3 ? 20.531 7.966 3.089 1.00 37.36 ? 12 A B N6 1 ATOM 236 N N1 . A B 2 3 ? 21.591 8.789 4.967 1.00 35.88 ? 12 A B N1 1 ATOM 237 C C2 . A B 2 3 ? 22.406 9.691 5.516 1.00 35.24 ? 12 A B C2 1 ATOM 238 N N3 . A B 2 3 ? 23.043 10.711 4.945 1.00 36.31 ? 12 A B N3 1 ATOM 239 C C4 . A B 2 3 ? 22.771 10.762 3.630 1.00 36.80 ? 12 A B C4 1 ATOM 240 P P . G B 2 4 ? 28.157 11.655 0.763 1.00 40.00 ? 13 G B P 1 ATOM 241 O OP1 . G B 2 4 ? 29.517 12.174 0.469 1.00 42.57 ? 13 G B OP1 1 ATOM 242 O OP2 . G B 2 4 ? 27.429 10.877 -0.274 1.00 38.15 ? 13 G B OP2 1 ATOM 243 O "O5'" . G B 2 4 ? 28.241 10.779 2.087 1.00 36.63 ? 13 G B "O5'" 1 ATOM 244 C "C5'" . G B 2 4 ? 28.836 11.308 3.264 1.00 34.04 ? 13 G B "C5'" 1 ATOM 245 C "C4'" . G B 2 4 ? 28.606 10.376 4.423 1.00 34.20 ? 13 G B "C4'" 1 ATOM 246 O "O4'" . G B 2 4 ? 27.188 10.330 4.725 1.00 33.75 ? 13 G B "O4'" 1 ATOM 247 C "C3'" . G B 2 4 ? 28.953 8.921 4.164 1.00 33.23 ? 13 G B "C3'" 1 ATOM 248 O "O3'" . G B 2 4 ? 30.340 8.660 4.276 1.00 33.21 ? 13 G B "O3'" 1 ATOM 249 C "C2'" . G B 2 4 ? 28.126 8.211 5.221 1.00 31.60 ? 13 G B "C2'" 1 ATOM 250 O "O2'" . G B 2 4 ? 28.700 8.299 6.506 1.00 33.86 ? 13 G B "O2'" 1 ATOM 251 C "C1'" . G B 2 4 ? 26.837 9.029 5.169 1.00 32.14 ? 13 G B "C1'" 1 ATOM 252 N N9 . G B 2 4 ? 25.879 8.465 4.226 1.00 27.93 ? 13 G B N9 1 ATOM 253 C C8 . G B 2 4 ? 25.616 8.884 2.944 1.00 27.35 ? 13 G B C8 1 ATOM 254 N N7 . G B 2 4 ? 24.713 8.156 2.343 1.00 26.75 ? 13 G B N7 1 ATOM 255 C C5 . G B 2 4 ? 24.355 7.206 3.291 1.00 28.01 ? 13 G B C5 1 ATOM 256 C C6 . G B 2 4 ? 23.420 6.140 3.223 1.00 27.25 ? 13 G B C6 1 ATOM 257 O O6 . G B 2 4 ? 22.686 5.817 2.283 1.00 28.59 ? 13 G B O6 1 ATOM 258 N N1 . G B 2 4 ? 23.385 5.413 4.411 1.00 26.76 ? 13 G B N1 1 ATOM 259 C C2 . G B 2 4 ? 24.151 5.677 5.522 1.00 27.72 ? 13 G B C2 1 ATOM 260 N N2 . G B 2 4 ? 23.985 4.857 6.578 1.00 25.41 ? 13 G B N2 1 ATOM 261 N N3 . G B 2 4 ? 25.020 6.669 5.598 1.00 26.84 ? 13 G B N3 1 ATOM 262 C C4 . G B 2 4 ? 25.069 7.387 4.457 1.00 28.24 ? 13 G B C4 1 ATOM 263 P P . A B 2 5 ? 30.998 7.520 3.349 1.00 36.66 ? 14 A B P 1 ATOM 264 O OP1 . A B 2 5 ? 32.476 7.615 3.496 1.00 35.24 ? 14 A B OP1 1 ATOM 265 O OP2 . A B 2 5 ? 30.382 7.617 1.999 1.00 36.39 ? 14 A B OP2 1 ATOM 266 O "O5'" . A B 2 5 ? 30.506 6.163 4.023 1.00 33.30 ? 14 A B "O5'" 1 ATOM 267 C "C5'" . A B 2 5 ? 30.654 5.976 5.422 1.00 30.52 ? 14 A B "C5'" 1 ATOM 268 C "C4'" . A B 2 5 ? 29.917 4.746 5.872 1.00 30.26 ? 14 A B "C4'" 1 ATOM 269 O "O4'" . A B 2 5 ? 28.485 4.961 5.873 1.00 28.62 ? 14 A B "O4'" 1 ATOM 270 C "C3'" . A B 2 5 ? 30.084 3.513 5.013 1.00 29.65 ? 14 A B "C3'" 1 ATOM 271 O "O3'" . A B 2 5 ? 31.325 2.879 5.258 1.00 32.61 ? 14 A B "O3'" 1 ATOM 272 C "C2'" . A B 2 5 ? 28.924 2.668 5.500 1.00 28.42 ? 14 A B "C2'" 1 ATOM 273 O "O2'" . A B 2 5 ? 29.210 2.149 6.778 1.00 28.06 ? 14 A B "O2'" 1 ATOM 274 C "C1'" . A B 2 5 ? 27.826 3.726 5.622 1.00 28.01 ? 14 A B "C1'" 1 ATOM 275 N N9 . A B 2 5 ? 27.060 3.860 4.386 1.00 26.86 ? 14 A B N9 1 ATOM 276 C C8 . A B 2 5 ? 27.208 4.818 3.412 1.00 25.22 ? 14 A B C8 1 ATOM 277 N N7 . A B 2 5 ? 26.385 4.677 2.404 1.00 25.07 ? 14 A B N7 1 ATOM 278 C C5 . A B 2 5 ? 25.641 3.550 2.736 1.00 24.96 ? 14 A B C5 1 ATOM 279 C C6 . A B 2 5 ? 24.594 2.881 2.077 1.00 23.85 ? 14 A B C6 1 ATOM 280 N N6 . A B 2 5 ? 24.106 3.258 0.894 1.00 25.75 ? 14 A B N6 1 ATOM 281 N N1 . A B 2 5 ? 24.058 1.801 2.682 1.00 24.18 ? 14 A B N1 1 ATOM 282 C C2 . A B 2 5 ? 24.551 1.427 3.870 1.00 25.78 ? 14 A B C2 1 ATOM 283 N N3 . A B 2 5 ? 25.535 1.971 4.586 1.00 25.14 ? 14 A B N3 1 ATOM 284 C C4 . A B 2 5 ? 26.044 3.041 3.955 1.00 24.95 ? 14 A B C4 1 ATOM 285 P P . A B 2 6 ? 31.981 1.968 4.115 1.00 31.57 ? 15 A B P 1 ATOM 286 O OP1 . A B 2 6 ? 33.358 1.633 4.554 1.00 36.02 ? 15 A B OP1 1 ATOM 287 O OP2 . A B 2 6 ? 31.764 2.622 2.801 1.00 32.48 ? 15 A B OP2 1 ATOM 288 O "O5'" . A B 2 6 ? 31.109 0.640 4.157 1.00 30.93 ? 15 A B "O5'" 1 ATOM 289 C "C5'" . A B 2 6 ? 31.149 -0.211 5.288 1.00 28.52 ? 15 A B "C5'" 1 ATOM 290 C "C4'" . A B 2 6 ? 30.140 -1.308 5.132 1.00 29.09 ? 15 A B "C4'" 1 ATOM 291 O "O4'" . A B 2 6 ? 28.828 -0.703 5.037 1.00 27.92 ? 15 A B "O4'" 1 ATOM 292 C "C3'" . A B 2 6 ? 30.243 -2.128 3.854 1.00 29.97 ? 15 A B "C3'" 1 ATOM 293 O "O3'" . A B 2 6 ? 31.207 -3.166 3.972 1.00 35.49 ? 15 A B "O3'" 1 ATOM 294 C "C2'" . A B 2 6 ? 28.839 -2.692 3.746 1.00 28.35 ? 15 A B "C2'" 1 ATOM 295 O "O2'" . A B 2 6 ? 28.630 -3.763 4.637 1.00 30.41 ? 15 A B "O2'" 1 ATOM 296 C "C1'" . A B 2 6 ? 28.003 -1.495 4.197 1.00 27.70 ? 15 A B "C1'" 1 ATOM 297 N N9 . A B 2 6 ? 27.571 -0.681 3.064 1.00 24.25 ? 15 A B N9 1 ATOM 298 C C8 . A B 2 6 ? 28.093 0.507 2.610 1.00 22.67 ? 15 A B C8 1 ATOM 299 N N7 . A B 2 6 ? 27.494 0.971 1.542 1.00 23.03 ? 15 A B N7 1 ATOM 300 C C5 . A B 2 6 ? 26.504 0.030 1.281 1.00 23.10 ? 15 A B C5 1 ATOM 301 C C6 . A B 2 6 ? 25.522 -0.061 0.278 1.00 22.64 ? 15 A B C6 1 ATOM 302 N N6 . A B 2 6 ? 25.365 0.845 -0.687 1.00 20.37 ? 15 A B N6 1 ATOM 303 N N1 . A B 2 6 ? 24.694 -1.130 0.305 1.00 21.31 ? 15 A B N1 1 ATOM 304 C C2 . A B 2 6 ? 24.850 -2.032 1.279 1.00 23.25 ? 15 A B C2 1 ATOM 305 N N3 . A B 2 6 ? 25.732 -2.057 2.273 1.00 21.93 ? 15 A B N3 1 ATOM 306 C C4 . A B 2 6 ? 26.538 -0.987 2.215 1.00 21.71 ? 15 A B C4 1 ATOM 307 P P . G B 2 7 ? 31.832 -3.838 2.649 1.00 37.67 ? 16 G B P 1 ATOM 308 O OP1 . G B 2 7 ? 32.850 -4.810 3.113 1.00 40.36 ? 16 G B OP1 1 ATOM 309 O OP2 . G B 2 7 ? 32.214 -2.784 1.682 1.00 39.68 ? 16 G B OP2 1 ATOM 310 O "O5'" . G B 2 7 ? 30.625 -4.663 2.033 1.00 35.24 ? 16 G B "O5'" 1 ATOM 311 C "C5'" . G B 2 7 ? 30.115 -5.794 2.715 1.00 32.72 ? 16 G B "C5'" 1 ATOM 312 C "C4'" . G B 2 7 ? 28.961 -6.377 1.953 1.00 32.22 ? 16 G B "C4'" 1 ATOM 313 O "O4'" . G B 2 7 ? 27.889 -5.395 1.888 1.00 31.50 ? 16 G B "O4'" 1 ATOM 314 C "C3'" . G B 2 7 ? 29.211 -6.712 0.490 1.00 30.54 ? 16 G B "C3'" 1 ATOM 315 O "O3'" . G B 2 7 ? 29.895 -7.953 0.327 1.00 30.76 ? 16 G B "O3'" 1 ATOM 316 C "C2'" . G B 2 7 ? 27.785 -6.771 -0.042 1.00 30.71 ? 16 G B "C2'" 1 ATOM 317 O "O2'" . G B 2 7 ? 27.129 -7.966 0.328 1.00 30.38 ? 16 G B "O2'" 1 ATOM 318 C "C1'" . G B 2 7 ? 27.143 -5.590 0.693 1.00 29.12 ? 16 G B "C1'" 1 ATOM 319 N N9 . G B 2 7 ? 27.201 -4.365 -0.097 1.00 27.09 ? 16 G B N9 1 ATOM 320 C C8 . G B 2 7 ? 28.106 -3.338 0.021 1.00 25.73 ? 16 G B C8 1 ATOM 321 N N7 . G B 2 7 ? 27.918 -2.388 -0.854 1.00 24.33 ? 16 G B N7 1 ATOM 322 C C5 . G B 2 7 ? 26.818 -2.811 -1.589 1.00 24.26 ? 16 G B C5 1 ATOM 323 C C6 . G B 2 7 ? 26.151 -2.199 -2.685 1.00 24.39 ? 16 G B C6 1 ATOM 324 O O6 . G B 2 7 ? 26.409 -1.127 -3.242 1.00 21.93 ? 16 G B O6 1 ATOM 325 N N1 . G B 2 7 ? 25.084 -2.971 -3.128 1.00 23.91 ? 16 G B N1 1 ATOM 326 C C2 . G B 2 7 ? 24.703 -4.177 -2.584 1.00 25.36 ? 16 G B C2 1 ATOM 327 N N2 . G B 2 7 ? 23.636 -4.775 -3.139 1.00 24.79 ? 16 G B N2 1 ATOM 328 N N3 . G B 2 7 ? 25.319 -4.755 -1.571 1.00 25.63 ? 16 G B N3 1 ATOM 329 C C4 . G B 2 7 ? 26.360 -4.024 -1.127 1.00 24.65 ? 16 G B C4 1 ATOM 330 P P . A B 2 8 ? 30.727 -8.242 -1.028 1.00 28.59 ? 17 A B P 1 ATOM 331 O OP1 . A B 2 8 ? 31.185 -9.652 -0.964 1.00 31.48 ? 17 A B OP1 1 ATOM 332 O OP2 . A B 2 8 ? 31.724 -7.159 -1.206 1.00 25.02 ? 17 A B OP2 1 ATOM 333 O "O5'" . A B 2 8 ? 29.621 -8.179 -2.173 1.00 26.81 ? 17 A B "O5'" 1 ATOM 334 C "C5'" . A B 2 8 ? 28.589 -9.159 -2.221 1.00 26.10 ? 17 A B "C5'" 1 ATOM 335 C "C4'" . A B 2 8 ? 27.618 -8.873 -3.346 1.00 27.87 ? 17 A B "C4'" 1 ATOM 336 O "O4'" . A B 2 8 ? 26.905 -7.634 -3.093 1.00 26.87 ? 17 A B "O4'" 1 ATOM 337 C "C3'" . A B 2 8 ? 28.190 -8.686 -4.742 1.00 26.87 ? 17 A B "C3'" 1 ATOM 338 O "O3'" . A B 2 8 ? 28.443 -9.937 -5.367 1.00 29.61 ? 17 A B "O3'" 1 ATOM 339 C "C2'" . A B 2 8 ? 27.053 -7.962 -5.437 1.00 24.65 ? 17 A B "C2'" 1 ATOM 340 O "O2'" . A B 2 8 ? 26.015 -8.836 -5.821 1.00 25.02 ? 17 A B "O2'" 1 ATOM 341 C "C1'" . A B 2 8 ? 26.580 -7.018 -4.326 1.00 26.46 ? 17 A B "C1'" 1 ATOM 342 N N9 . A B 2 8 ? 27.284 -5.740 -4.398 1.00 24.81 ? 17 A B N9 1 ATOM 343 C C8 . A B 2 8 ? 28.352 -5.319 -3.652 1.00 24.65 ? 17 A B C8 1 ATOM 344 N N7 . A B 2 8 ? 28.799 -4.134 -3.990 1.00 25.65 ? 17 A B N7 1 ATOM 345 C C5 . A B 2 8 ? 27.962 -3.746 -5.022 1.00 23.61 ? 17 A B C5 1 ATOM 346 C C6 . A B 2 8 ? 27.920 -2.595 -5.817 1.00 23.73 ? 17 A B C6 1 ATOM 347 N N6 . A B 2 8 ? 28.781 -1.580 -5.691 1.00 23.06 ? 17 A B N6 1 ATOM 348 N N1 . A B 2 8 ? 26.955 -2.520 -6.761 1.00 24.96 ? 17 A B N1 1 ATOM 349 C C2 . A B 2 8 ? 26.103 -3.545 -6.892 1.00 25.34 ? 17 A B C2 1 ATOM 350 N N3 . A B 2 8 ? 26.047 -4.684 -6.207 1.00 23.94 ? 17 A B N3 1 ATOM 351 C C4 . A B 2 8 ? 27.015 -4.721 -5.276 1.00 23.74 ? 17 A B C4 1 ATOM 352 P P . G B 2 9 ? 29.396 -10.009 -6.662 1.00 31.38 ? 18 G B P 1 ATOM 353 O OP1 . G B 2 9 ? 29.630 -11.458 -6.881 1.00 33.54 ? 18 G B OP1 1 ATOM 354 O OP2 . G B 2 9 ? 30.558 -9.102 -6.495 1.00 30.16 ? 18 G B OP2 1 ATOM 355 O "O5'" . G B 2 9 ? 28.493 -9.437 -7.847 1.00 27.86 ? 18 G B "O5'" 1 ATOM 356 C "C5'" . G B 2 9 ? 27.347 -10.152 -8.304 1.00 28.29 ? 18 G B "C5'" 1 ATOM 357 C "C4'" . G B 2 9 ? 26.669 -9.411 -9.439 1.00 29.18 ? 18 G B "C4'" 1 ATOM 358 O "O4'" . G B 2 9 ? 26.215 -8.109 -8.987 1.00 29.55 ? 18 G B "O4'" 1 ATOM 359 C "C3'" . G B 2 9 ? 27.526 -9.097 -10.652 1.00 28.64 ? 18 G B "C3'" 1 ATOM 360 O "O3'" . G B 2 9 ? 27.719 -10.253 -11.469 1.00 29.68 ? 18 G B "O3'" 1 ATOM 361 C "C2'" . G B 2 9 ? 26.761 -7.941 -11.293 1.00 28.88 ? 18 G B "C2'" 1 ATOM 362 O "O2'" . G B 2 9 ? 25.628 -8.369 -12.024 1.00 28.38 ? 18 G B "O2'" 1 ATOM 363 C "C1'" . G B 2 9 ? 26.282 -7.178 -10.057 1.00 27.87 ? 18 G B "C1'" 1 ATOM 364 N N9 . G B 2 9 ? 27.171 -6.093 -9.661 1.00 28.41 ? 18 G B N9 1 ATOM 365 C C8 . G B 2 9 ? 28.105 -6.118 -8.655 1.00 26.15 ? 18 G B C8 1 ATOM 366 N N7 . G B 2 9 ? 28.752 -4.991 -8.529 1.00 27.52 ? 18 G B N7 1 ATOM 367 C C5 . G B 2 9 ? 28.210 -4.171 -9.510 1.00 26.92 ? 18 G B C5 1 ATOM 368 C C6 . G B 2 9 ? 28.520 -2.834 -9.862 1.00 26.01 ? 18 G B C6 1 ATOM 369 O O6 . G B 2 9 ? 29.358 -2.083 -9.359 1.00 23.47 ? 18 G B O6 1 ATOM 370 N N1 . G B 2 9 ? 27.740 -2.390 -10.925 1.00 26.53 ? 18 G B N1 1 ATOM 371 C C2 . G B 2 9 ? 26.786 -3.136 -11.569 1.00 27.54 ? 18 G B C2 1 ATOM 372 N N2 . G B 2 9 ? 26.130 -2.524 -12.574 1.00 28.52 ? 18 G B N2 1 ATOM 373 N N3 . G B 2 9 ? 26.490 -4.387 -11.253 1.00 28.11 ? 18 G B N3 1 ATOM 374 C C4 . G B 2 9 ? 27.236 -4.836 -10.220 1.00 27.84 ? 18 G B C4 1 HETATM 375 NA NA . NA C 3 . ? 15.223 0.193 0.407 1.00 23.06 ? 203 NA A NA 1 HETATM 376 O O1Y . CMY D 4 . ? 26.067 3.655 -10.331 1.00 38.52 ? 102 CMY A O1Y 1 HETATM 377 C C1Y . CMY D 4 . ? 26.499 2.794 -9.558 1.00 36.25 ? 102 CMY A C1Y 1 HETATM 378 N N1Y . CMY D 4 . ? 27.606 3.040 -8.599 1.00 39.19 ? 102 CMY A N1Y 1 HETATM 379 C C2Y . CMY D 4 . ? 28.072 4.450 -8.727 1.00 43.52 ? 102 CMY A C2Y 1 HETATM 380 C C3Y . CMY D 4 . ? 29.240 4.718 -7.758 1.00 48.09 ? 102 CMY A C3Y 1 HETATM 381 C C4Y . CMY D 4 . ? 30.413 3.760 -8.114 1.00 51.22 ? 102 CMY A C4Y 1 HETATM 382 C C5Y . CMY D 4 . ? 31.628 3.992 -7.167 1.00 54.49 ? 102 CMY A C5Y 1 HETATM 383 C C6Y . CMY D 4 . ? 31.297 3.737 -5.655 1.00 56.59 ? 102 CMY A C6Y 1 HETATM 384 C C7Y . CMY D 4 . ? 30.844 2.267 -5.382 1.00 57.86 ? 102 CMY A C7Y 1 HETATM 385 N N2Y . CMY D 4 . ? 29.627 1.935 -6.139 1.00 58.47 ? 102 CMY A N2Y 1 HETATM 386 O O1Y . CMY E 4 . ? 17.757 -0.338 -0.558 1.00 30.14 ? 105 CMY A O1Y 1 HETATM 387 C C1Y . CMY E 4 . ? 18.809 0.297 -0.365 1.00 30.59 ? 105 CMY A C1Y 1 HETATM 388 N N1Y . CMY E 4 . ? 19.164 1.549 -1.088 1.00 30.44 ? 105 CMY A N1Y 1 HETATM 389 C C2Y . CMY E 4 . ? 18.094 1.932 -2.029 1.00 34.08 ? 105 CMY A C2Y 1 HETATM 390 C C3Y . CMY E 4 . ? 18.520 3.211 -2.755 1.00 38.67 ? 105 CMY A C3Y 1 HETATM 391 C C4Y . CMY E 4 . ? 17.416 3.639 -3.748 1.00 41.65 ? 105 CMY A C4Y 1 HETATM 392 C C5Y . CMY E 4 . ? 17.856 4.926 -4.496 1.00 43.76 ? 105 CMY A C5Y 1 HETATM 393 C C6Y . CMY E 4 . ? 18.101 6.077 -3.506 1.00 45.34 ? 105 CMY A C6Y 1 HETATM 394 C C7Y . CMY E 4 . ? 18.537 7.320 -4.296 1.00 47.84 ? 105 CMY A C7Y 1 HETATM 395 N N2Y . CMY E 4 . ? 18.778 8.435 -3.359 1.00 50.26 ? 105 CMY A N2Y 1 HETATM 396 BA BA . BA F 5 . ? 22.979 7.659 -0.048 1.00 43.40 ? 101 BA B BA 1 HETATM 397 BA BA . BA G 5 . ? 31.683 -3.766 -4.811 1.00 51.21 ? 102 BA B BA 1 HETATM 398 NA NA . NA H 3 . ? 29.483 2.185 -0.710 1.00 21.81 ? 201 NA B NA 1 HETATM 399 NA NA . NA I 3 . ? 34.213 -10.807 -4.766 1.00 18.83 ? 202 NA B NA 1 HETATM 400 O O . HOH J 6 . ? 16.077 -6.761 8.945 1.00 42.66 ? 204 HOH A O 1 HETATM 401 O O . HOH J 6 . ? 26.533 2.532 -5.319 1.00 40.04 ? 205 HOH A O 1 HETATM 402 O O . HOH J 6 . ? 15.422 0.331 -2.104 1.00 44.00 ? 206 HOH A O 1 HETATM 403 O O . HOH J 6 . ? 24.348 3.503 -6.558 1.00 51.59 ? 207 HOH A O 1 HETATM 404 O O . HOH J 6 . ? 22.787 7.894 -10.539 1.00 35.95 ? 208 HOH A O 1 HETATM 405 O O . HOH J 6 . ? 19.054 5.059 0.325 1.00 24.38 ? 209 HOH A O 1 HETATM 406 O O . HOH J 6 . ? 22.451 2.958 -2.685 1.00 36.62 ? 210 HOH A O 1 HETATM 407 O O . HOH J 6 . ? 24.696 4.007 -3.110 1.00 37.06 ? 211 HOH A O 1 HETATM 408 O O . HOH J 6 . ? 10.671 -1.786 12.760 1.00 69.01 ? 212 HOH A O 1 HETATM 409 O O . HOH J 6 . ? 12.812 -1.032 -0.308 1.00 44.34 ? 213 HOH A O 1 HETATM 410 O O . HOH J 6 . ? 18.414 6.589 -7.545 1.00 50.43 ? 214 HOH A O 1 HETATM 411 O O . HOH J 6 . ? 12.813 -10.654 10.942 1.00 42.15 ? 215 HOH A O 1 HETATM 412 O O . HOH J 6 . ? 15.129 -8.559 10.400 1.00 63.44 ? 216 HOH A O 1 HETATM 413 O O . HOH J 6 . ? 17.780 5.331 3.192 1.00 32.34 ? 217 HOH A O 1 HETATM 414 O O . HOH J 6 . ? 13.577 -6.046 8.240 1.00 50.33 ? 218 HOH A O 1 HETATM 415 O O . HOH J 6 . ? 17.978 5.389 -11.632 1.00 59.15 ? 219 HOH A O 1 HETATM 416 O O . HOH J 6 . ? 14.081 13.760 14.838 1.00 42.42 ? 220 HOH A O 1 HETATM 417 O O . HOH J 6 . ? 15.563 -5.650 6.574 1.00 57.27 ? 221 HOH A O 1 HETATM 418 O O . HOH J 6 . ? 23.802 8.929 -13.589 1.00 59.67 ? 222 HOH A O 1 HETATM 419 O O . HOH J 6 . ? 9.147 3.156 -7.719 1.00 56.94 ? 223 HOH A O 1 HETATM 420 O O . HOH J 6 . ? 17.436 -8.717 7.832 1.00 40.53 ? 224 HOH A O 1 HETATM 421 O O . HOH J 6 . ? 7.424 -10.693 11.457 1.00 73.76 ? 225 HOH A O 1 HETATM 422 O O . HOH J 6 . ? 11.222 2.463 -14.535 1.00 54.79 ? 226 HOH A O 1 HETATM 423 O O . HOH J 6 . ? 18.431 9.113 -13.082 1.00 41.70 ? 227 HOH A O 1 HETATM 424 O O . HOH J 6 . ? 17.140 7.597 -10.445 1.00 47.77 ? 228 HOH A O 1 HETATM 425 O O . HOH J 6 . ? 18.567 2.296 -6.395 1.00 42.51 ? 229 HOH A O 1 HETATM 426 O O . HOH J 6 . ? 12.371 -0.749 -4.661 1.00 48.42 ? 230 HOH A O 1 HETATM 427 O O . HOH J 6 . ? 15.317 6.849 5.580 1.00 34.45 ? 231 HOH A O 1 HETATM 428 O O . HOH J 6 . ? 21.201 8.706 -2.244 1.00 44.06 ? 232 HOH A O 1 HETATM 429 O O . HOH J 6 . ? 19.000 16.758 4.435 1.00 46.10 ? 233 HOH A O 1 HETATM 430 O O . HOH J 6 . ? 21.325 3.839 -5.394 1.00 39.18 ? 234 HOH A O 1 HETATM 431 O O . HOH J 6 . ? 20.277 6.905 -9.120 1.00 63.38 ? 235 HOH A O 1 HETATM 432 O O . HOH J 6 . ? 13.746 8.347 11.100 1.00 34.87 ? 236 HOH A O 1 HETATM 433 O O . HOH J 6 . ? 10.144 -9.321 9.755 1.00 83.32 ? 237 HOH A O 1 HETATM 434 O O . HOH J 6 . ? 15.426 2.556 -9.389 1.00 38.96 ? 238 HOH A O 1 HETATM 435 O O . HOH K 6 . ? 25.367 17.791 8.036 1.00 52.19 ? 203 HOH B O 1 HETATM 436 O O . HOH K 6 . ? 23.275 10.446 -4.635 1.00 42.87 ? 204 HOH B O 1 HETATM 437 O O . HOH K 6 . ? 28.579 5.204 -0.298 1.00 25.54 ? 205 HOH B O 1 HETATM 438 O O . HOH K 6 . ? 22.922 -6.216 -13.327 1.00 26.37 ? 206 HOH B O 1 HETATM 439 O O . HOH K 6 . ? 13.621 8.523 1.424 1.00 20.20 ? 207 HOH B O 1 HETATM 440 O O . HOH K 6 . ? 23.294 15.911 5.499 1.00 31.66 ? 208 HOH B O 1 HETATM 441 O O . HOH K 6 . ? 27.669 7.369 -1.501 1.00 35.67 ? 209 HOH B O 1 HETATM 442 O O . HOH K 6 . ? 27.060 1.222 7.073 1.00 27.61 ? 210 HOH B O 1 HETATM 443 O O . HOH K 6 . ? 27.156 3.145 -1.003 1.00 32.03 ? 211 HOH B O 1 HETATM 444 O O . HOH K 6 . ? 29.930 -0.692 -1.122 1.00 26.05 ? 212 HOH B O 1 HETATM 445 O O . HOH K 6 . ? 19.486 7.929 0.772 1.00 31.53 ? 213 HOH B O 1 HETATM 446 O O . HOH K 6 . ? 25.997 -4.050 4.520 1.00 41.14 ? 214 HOH B O 1 HETATM 447 O O . HOH K 6 . ? 28.955 5.403 -3.483 1.00 57.07 ? 215 HOH B O 1 HETATM 448 O O . HOH K 6 . ? 21.604 5.268 -0.856 1.00 19.15 ? 216 HOH B O 1 HETATM 449 O O . HOH K 6 . ? 31.554 1.611 0.405 1.00 34.88 ? 217 HOH B O 1 HETATM 450 O O . HOH K 6 . ? 30.793 -1.000 -3.853 1.00 18.60 ? 218 HOH B O 1 HETATM 451 O O . HOH K 6 . ? 24.836 7.222 -5.966 1.00 58.50 ? 219 HOH B O 1 HETATM 452 O O . HOH K 6 . ? 24.251 7.156 -2.404 1.00 38.57 ? 220 HOH B O 1 HETATM 453 O O . HOH K 6 . ? 25.577 6.264 -0.110 1.00 24.88 ? 221 HOH B O 1 HETATM 454 O O . HOH K 6 . ? 25.274 -5.421 -13.340 1.00 32.18 ? 222 HOH B O 1 HETATM 455 O O . HOH K 6 . ? 15.935 17.467 -1.819 1.00 27.96 ? 223 HOH B O 1 HETATM 456 O O . HOH K 6 . ? 11.744 10.073 0.532 1.00 46.57 ? 224 HOH B O 1 HETATM 457 O O . HOH K 6 . ? 26.904 -8.947 -14.222 1.00 34.20 ? 225 HOH B O 1 HETATM 458 O O . HOH K 6 . ? 25.976 -7.425 4.699 1.00 39.51 ? 226 HOH B O 1 HETATM 459 O O . HOH K 6 . ? 25.075 9.053 -1.108 1.00 26.94 ? 227 HOH B O 1 HETATM 460 O O . HOH K 6 . ? 32.108 -12.019 -6.093 1.00 40.21 ? 228 HOH B O 1 HETATM 461 O O . HOH K 6 . ? 30.632 -8.096 5.354 1.00 59.67 ? 229 HOH B O 1 HETATM 462 O O . HOH K 6 . ? 12.959 6.177 0.590 1.00 61.69 ? 230 HOH B O 1 HETATM 463 O O . HOH K 6 . ? 22.040 7.693 -5.832 1.00 61.88 ? 231 HOH B O 1 HETATM 464 O O . HOH K 6 . ? 24.886 9.595 -7.275 1.00 66.42 ? 232 HOH B O 1 HETATM 465 O O . HOH K 6 . ? 10.342 6.179 -7.923 1.00 46.10 ? 233 HOH B O 1 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC CYT A . n A 1 2 OMU 2 2 2 OMU THY A . n A 1 3 DC 3 3 3 DC CYT A . n A 1 4 DT 4 4 4 DT THY A . n A 1 5 OMU 5 5 5 OMU THY A . n A 1 6 DC 6 6 6 DC CYT A . n A 1 7 DT 7 7 7 DT THY A . n A 1 8 DT 8 8 8 DT THY A . n A 1 9 DC 9 9 9 DC CYT A . n B 2 1 G 1 10 10 G GUA B . n B 2 2 A 2 11 11 A ADE B . n B 2 3 A 3 12 12 A ADE B . n B 2 4 G 4 13 13 G GUA B . n B 2 5 A 5 14 14 A ADE B . n B 2 6 A 6 15 15 A ADE B . n B 2 7 G 7 16 16 G GUA B . n B 2 8 A 8 17 17 A ADE B . n B 2 9 G 9 18 18 G GUA B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NA 1 203 3 NA NA1 A . D 4 CMY 1 102 2 CMY THY A . E 4 CMY 1 105 5 CMY THY A . F 5 BA 1 101 1 BA BA2 B . G 5 BA 1 102 2 BA BA2 B . H 3 NA 1 201 1 NA NA1 B . I 3 NA 1 202 2 NA NA1 B . J 6 HOH 1 204 1 HOH HOH A . J 6 HOH 2 205 7 HOH HOH A . J 6 HOH 3 206 9 HOH HOH A . J 6 HOH 4 207 10 HOH HOH A . J 6 HOH 5 208 18 HOH HOH A . J 6 HOH 6 209 21 HOH HOH A . J 6 HOH 7 210 22 HOH HOH A . J 6 HOH 8 211 23 HOH HOH A . J 6 HOH 9 212 27 HOH HOH A . J 6 HOH 10 213 29 HOH HOH A . J 6 HOH 11 214 30 HOH HOH A . J 6 HOH 12 215 31 HOH HOH A . J 6 HOH 13 216 32 HOH HOH A . J 6 HOH 14 217 34 HOH HOH A . J 6 HOH 15 218 35 HOH HOH A . J 6 HOH 16 219 39 HOH HOH A . J 6 HOH 17 220 41 HOH HOH A . J 6 HOH 18 221 42 HOH HOH A . J 6 HOH 19 222 45 HOH HOH A . J 6 HOH 20 223 46 HOH HOH A . J 6 HOH 21 224 47 HOH HOH A . J 6 HOH 22 225 48 HOH HOH A . J 6 HOH 23 226 49 HOH HOH A . J 6 HOH 24 227 50 HOH HOH A . J 6 HOH 25 228 51 HOH HOH A . J 6 HOH 26 229 52 HOH HOH A . J 6 HOH 27 230 53 HOH HOH A . J 6 HOH 28 231 55 HOH HOH A . J 6 HOH 29 232 56 HOH HOH A . J 6 HOH 30 233 58 HOH HOH A . J 6 HOH 31 234 59 HOH HOH A . J 6 HOH 32 235 60 HOH HOH A . J 6 HOH 33 236 62 HOH HOH A . J 6 HOH 34 237 63 HOH HOH A . J 6 HOH 35 238 64 HOH HOH A . K 6 HOH 1 203 2 HOH HOH B . K 6 HOH 2 204 3 HOH HOH B . K 6 HOH 3 205 4 HOH HOH B . K 6 HOH 4 206 5 HOH HOH B . K 6 HOH 5 207 6 HOH HOH B . K 6 HOH 6 208 8 HOH HOH B . K 6 HOH 7 209 11 HOH HOH B . K 6 HOH 8 210 12 HOH HOH B . K 6 HOH 9 211 13 HOH HOH B . K 6 HOH 10 212 14 HOH HOH B . K 6 HOH 11 213 15 HOH HOH B . K 6 HOH 12 214 16 HOH HOH B . K 6 HOH 13 215 17 HOH HOH B . K 6 HOH 14 216 19 HOH HOH B . K 6 HOH 15 217 20 HOH HOH B . K 6 HOH 16 218 24 HOH HOH B . K 6 HOH 17 219 25 HOH HOH B . K 6 HOH 18 220 26 HOH HOH B . K 6 HOH 19 221 28 HOH HOH B . K 6 HOH 20 222 33 HOH HOH B . K 6 HOH 21 223 36 HOH HOH B . K 6 HOH 22 224 37 HOH HOH B . K 6 HOH 23 225 38 HOH HOH B . K 6 HOH 24 226 40 HOH HOH B . K 6 HOH 25 227 43 HOH HOH B . K 6 HOH 26 228 44 HOH HOH B . K 6 HOH 27 229 54 HOH HOH B . K 6 HOH 28 230 57 HOH HOH B . K 6 HOH 29 231 61 HOH HOH B . K 6 HOH 30 232 65 HOH HOH B . K 6 HOH 31 233 66 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A OMU 2 A OMU 2 ? U ;O2'-METHYLURIDINE 5'-MONOPHOSPHATE ; 2 A OMU 5 A OMU 5 ? U ;O2'-METHYLURIDINE 5'-MONOPHOSPHATE ; # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP2 ? A OMU 5 ? A OMU 5 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 O1Y ? E CMY . ? A CMY 105 ? 1_555 75.0 ? 2 OP2 ? A OMU 5 ? A OMU 5 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 O ? J HOH . ? A HOH 206 ? 1_555 83.9 ? 3 O1Y ? E CMY . ? A CMY 105 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 O ? J HOH . ? A HOH 206 ? 1_555 65.8 ? 4 OP2 ? A OMU 5 ? A OMU 5 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 O ? J HOH . ? A HOH 213 ? 1_555 62.5 ? 5 O1Y ? E CMY . ? A CMY 105 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 O ? J HOH . ? A HOH 213 ? 1_555 128.1 ? 6 O ? J HOH . ? A HOH 206 ? 1_555 NA ? C NA . ? A NA 203 ? 1_555 O ? J HOH . ? A HOH 213 ? 1_555 80.6 ? 7 O ? K HOH . ? B HOH 211 ? 1_555 NA ? H NA . ? B NA 201 ? 1_555 O ? K HOH . ? B HOH 212 ? 1_555 119.6 ? 8 O ? K HOH . ? B HOH 211 ? 1_555 NA ? H NA . ? B NA 201 ? 1_555 O ? K HOH . ? B HOH 217 ? 1_555 158.2 ? 9 O ? K HOH . ? B HOH 212 ? 1_555 NA ? H NA . ? B NA 201 ? 1_555 O ? K HOH . ? B HOH 217 ? 1_555 72.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-04-17 2 'Structure model' 1 1 2007-12-26 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.value' 14 4 'Structure model' '_struct_conn.pdbx_dist_value' 15 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 16 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 17 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 18 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 22 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 24 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 28 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 29 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 30 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 CNS refinement 1.1 ? 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 BA BA BA N N 38 CMY O1Y O N N 39 CMY C1Y C N N 40 CMY N1Y N N N 41 CMY C2Y C N N 42 CMY C3Y C N N 43 CMY C4Y C N N 44 CMY C5Y C N N 45 CMY C6Y C N N 46 CMY C7Y C N N 47 CMY N2Y N N N 48 CMY O1 O N N 49 CMY H1Y H N N 50 CMY H1 H N N 51 CMY H2Y1 H N N 52 CMY H2Y2 H N N 53 CMY H3Y1 H N N 54 CMY H3Y2 H N N 55 CMY H4Y1 H N N 56 CMY H4Y2 H N N 57 CMY H5Y1 H N N 58 CMY H5Y2 H N N 59 CMY H6Y1 H N N 60 CMY H6Y2 H N N 61 CMY H7Y1 H N N 62 CMY H7Y2 H N N 63 CMY H11 H N N 64 CMY H12 H N N 65 DC OP3 O N N 66 DC P P N N 67 DC OP1 O N N 68 DC OP2 O N N 69 DC "O5'" O N N 70 DC "C5'" C N N 71 DC "C4'" C N R 72 DC "O4'" O N N 73 DC "C3'" C N S 74 DC "O3'" O N N 75 DC "C2'" C N N 76 DC "C1'" C N R 77 DC N1 N N N 78 DC C2 C N N 79 DC O2 O N N 80 DC N3 N N N 81 DC C4 C N N 82 DC N4 N N N 83 DC C5 C N N 84 DC C6 C N N 85 DC HOP3 H N N 86 DC HOP2 H N N 87 DC "H5'" H N N 88 DC "H5''" H N N 89 DC "H4'" H N N 90 DC "H3'" H N N 91 DC "HO3'" H N N 92 DC "H2'" H N N 93 DC "H2''" H N N 94 DC "H1'" H N N 95 DC H41 H N N 96 DC H42 H N N 97 DC H5 H N N 98 DC H6 H N N 99 DT OP3 O N N 100 DT P P N N 101 DT OP1 O N N 102 DT OP2 O N N 103 DT "O5'" O N N 104 DT "C5'" C N N 105 DT "C4'" C N R 106 DT "O4'" O N N 107 DT "C3'" C N S 108 DT "O3'" O N N 109 DT "C2'" C N N 110 DT "C1'" C N R 111 DT N1 N N N 112 DT C2 C N N 113 DT O2 O N N 114 DT N3 N N N 115 DT C4 C N N 116 DT O4 O N N 117 DT C5 C N N 118 DT C7 C N N 119 DT C6 C N N 120 DT HOP3 H N N 121 DT HOP2 H N N 122 DT "H5'" H N N 123 DT "H5''" H N N 124 DT "H4'" H N N 125 DT "H3'" H N N 126 DT "HO3'" H N N 127 DT "H2'" H N N 128 DT "H2''" H N N 129 DT "H1'" H N N 130 DT H3 H N N 131 DT H71 H N N 132 DT H72 H N N 133 DT H73 H N N 134 DT H6 H N N 135 G OP3 O N N 136 G P P N N 137 G OP1 O N N 138 G OP2 O N N 139 G "O5'" O N N 140 G "C5'" C N N 141 G "C4'" C N R 142 G "O4'" O N N 143 G "C3'" C N S 144 G "O3'" O N N 145 G "C2'" C N R 146 G "O2'" O N N 147 G "C1'" C N R 148 G N9 N Y N 149 G C8 C Y N 150 G N7 N Y N 151 G C5 C Y N 152 G C6 C N N 153 G O6 O N N 154 G N1 N N N 155 G C2 C N N 156 G N2 N N N 157 G N3 N N N 158 G C4 C Y N 159 G HOP3 H N N 160 G HOP2 H N N 161 G "H5'" H N N 162 G "H5''" H N N 163 G "H4'" H N N 164 G "H3'" H N N 165 G "HO3'" H N N 166 G "H2'" H N N 167 G "HO2'" H N N 168 G "H1'" H N N 169 G H8 H N N 170 G H1 H N N 171 G H21 H N N 172 G H22 H N N 173 HOH O O N N 174 HOH H1 H N N 175 HOH H2 H N N 176 NA NA NA N N 177 OMU N1 N N N 178 OMU C2 C N N 179 OMU N3 N N N 180 OMU C4 C N N 181 OMU C5 C N N 182 OMU C6 C N N 183 OMU O2 O N N 184 OMU O4 O N N 185 OMU "C1'" C N R 186 OMU "C2'" C N R 187 OMU "O2'" O N N 188 OMU CM2 C N N 189 OMU "C3'" C N R 190 OMU "C4'" C N R 191 OMU "O3'" O N N 192 OMU "O4'" O N N 193 OMU "C5'" C N N 194 OMU "O5'" O N N 195 OMU P P N N 196 OMU OP1 O N N 197 OMU OP2 O N N 198 OMU OP3 O N N 199 OMU HN3 H N N 200 OMU H5 H N N 201 OMU H6 H N N 202 OMU "H1'" H N N 203 OMU "H2'" H N N 204 OMU HM21 H N N 205 OMU HM22 H N N 206 OMU HM23 H N N 207 OMU "H3'" H N N 208 OMU "H4'" H N N 209 OMU "HO3'" H N N 210 OMU "H5'" H N N 211 OMU "H5''" H N N 212 OMU HOP2 H N N 213 OMU HOP3 H N N 214 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 CMY O1Y C1Y sing N N 40 CMY O1Y H1Y sing N N 41 CMY C1Y N1Y sing N N 42 CMY C1Y O1 doub N N 43 CMY N1Y C2Y sing N N 44 CMY N1Y H1 sing N N 45 CMY C2Y C3Y sing N N 46 CMY C2Y H2Y1 sing N N 47 CMY C2Y H2Y2 sing N N 48 CMY C3Y C4Y sing N N 49 CMY C3Y H3Y1 sing N N 50 CMY C3Y H3Y2 sing N N 51 CMY C4Y C5Y sing N N 52 CMY C4Y H4Y1 sing N N 53 CMY C4Y H4Y2 sing N N 54 CMY C5Y C6Y sing N N 55 CMY C5Y H5Y1 sing N N 56 CMY C5Y H5Y2 sing N N 57 CMY C6Y C7Y sing N N 58 CMY C6Y H6Y1 sing N N 59 CMY C6Y H6Y2 sing N N 60 CMY C7Y N2Y sing N N 61 CMY C7Y H7Y1 sing N N 62 CMY C7Y H7Y2 sing N N 63 CMY N2Y H11 sing N N 64 CMY N2Y H12 sing N N 65 DC OP3 P sing N N 66 DC OP3 HOP3 sing N N 67 DC P OP1 doub N N 68 DC P OP2 sing N N 69 DC P "O5'" sing N N 70 DC OP2 HOP2 sing N N 71 DC "O5'" "C5'" sing N N 72 DC "C5'" "C4'" sing N N 73 DC "C5'" "H5'" sing N N 74 DC "C5'" "H5''" sing N N 75 DC "C4'" "O4'" sing N N 76 DC "C4'" "C3'" sing N N 77 DC "C4'" "H4'" sing N N 78 DC "O4'" "C1'" sing N N 79 DC "C3'" "O3'" sing N N 80 DC "C3'" "C2'" sing N N 81 DC "C3'" "H3'" sing N N 82 DC "O3'" "HO3'" sing N N 83 DC "C2'" "C1'" sing N N 84 DC "C2'" "H2'" sing N N 85 DC "C2'" "H2''" sing N N 86 DC "C1'" N1 sing N N 87 DC "C1'" "H1'" sing N N 88 DC N1 C2 sing N N 89 DC N1 C6 sing N N 90 DC C2 O2 doub N N 91 DC C2 N3 sing N N 92 DC N3 C4 doub N N 93 DC C4 N4 sing N N 94 DC C4 C5 sing N N 95 DC N4 H41 sing N N 96 DC N4 H42 sing N N 97 DC C5 C6 doub N N 98 DC C5 H5 sing N N 99 DC C6 H6 sing N N 100 DT OP3 P sing N N 101 DT OP3 HOP3 sing N N 102 DT P OP1 doub N N 103 DT P OP2 sing N N 104 DT P "O5'" sing N N 105 DT OP2 HOP2 sing N N 106 DT "O5'" "C5'" sing N N 107 DT "C5'" "C4'" sing N N 108 DT "C5'" "H5'" sing N N 109 DT "C5'" "H5''" sing N N 110 DT "C4'" "O4'" sing N N 111 DT "C4'" "C3'" sing N N 112 DT "C4'" "H4'" sing N N 113 DT "O4'" "C1'" sing N N 114 DT "C3'" "O3'" sing N N 115 DT "C3'" "C2'" sing N N 116 DT "C3'" "H3'" sing N N 117 DT "O3'" "HO3'" sing N N 118 DT "C2'" "C1'" sing N N 119 DT "C2'" "H2'" sing N N 120 DT "C2'" "H2''" sing N N 121 DT "C1'" N1 sing N N 122 DT "C1'" "H1'" sing N N 123 DT N1 C2 sing N N 124 DT N1 C6 sing N N 125 DT C2 O2 doub N N 126 DT C2 N3 sing N N 127 DT N3 C4 sing N N 128 DT N3 H3 sing N N 129 DT C4 O4 doub N N 130 DT C4 C5 sing N N 131 DT C5 C7 sing N N 132 DT C5 C6 doub N N 133 DT C7 H71 sing N N 134 DT C7 H72 sing N N 135 DT C7 H73 sing N N 136 DT C6 H6 sing N N 137 G OP3 P sing N N 138 G OP3 HOP3 sing N N 139 G P OP1 doub N N 140 G P OP2 sing N N 141 G P "O5'" sing N N 142 G OP2 HOP2 sing N N 143 G "O5'" "C5'" sing N N 144 G "C5'" "C4'" sing N N 145 G "C5'" "H5'" sing N N 146 G "C5'" "H5''" sing N N 147 G "C4'" "O4'" sing N N 148 G "C4'" "C3'" sing N N 149 G "C4'" "H4'" sing N N 150 G "O4'" "C1'" sing N N 151 G "C3'" "O3'" sing N N 152 G "C3'" "C2'" sing N N 153 G "C3'" "H3'" sing N N 154 G "O3'" "HO3'" sing N N 155 G "C2'" "O2'" sing N N 156 G "C2'" "C1'" sing N N 157 G "C2'" "H2'" sing N N 158 G "O2'" "HO2'" sing N N 159 G "C1'" N9 sing N N 160 G "C1'" "H1'" sing N N 161 G N9 C8 sing Y N 162 G N9 C4 sing Y N 163 G C8 N7 doub Y N 164 G C8 H8 sing N N 165 G N7 C5 sing Y N 166 G C5 C6 sing N N 167 G C5 C4 doub Y N 168 G C6 O6 doub N N 169 G C6 N1 sing N N 170 G N1 C2 sing N N 171 G N1 H1 sing N N 172 G C2 N2 sing N N 173 G C2 N3 doub N N 174 G N2 H21 sing N N 175 G N2 H22 sing N N 176 G N3 C4 sing N N 177 HOH O H1 sing N N 178 HOH O H2 sing N N 179 OMU N1 C2 sing N N 180 OMU N1 C6 sing N N 181 OMU N1 "C1'" sing N N 182 OMU C2 N3 sing N N 183 OMU C2 O2 doub N N 184 OMU N3 C4 sing N N 185 OMU N3 HN3 sing N N 186 OMU C4 C5 sing N N 187 OMU C4 O4 doub N N 188 OMU C5 C6 doub N N 189 OMU C5 H5 sing N N 190 OMU C6 H6 sing N N 191 OMU "C1'" "C2'" sing N N 192 OMU "C1'" "O4'" sing N N 193 OMU "C1'" "H1'" sing N N 194 OMU "C2'" "O2'" sing N N 195 OMU "C2'" "C3'" sing N N 196 OMU "C2'" "H2'" sing N N 197 OMU "O2'" CM2 sing N N 198 OMU CM2 HM21 sing N N 199 OMU CM2 HM22 sing N N 200 OMU CM2 HM23 sing N N 201 OMU "C3'" "C4'" sing N N 202 OMU "C3'" "O3'" sing N N 203 OMU "C3'" "H3'" sing N N 204 OMU "C4'" "O4'" sing N N 205 OMU "C4'" "C5'" sing N N 206 OMU "C4'" "H4'" sing N N 207 OMU "O3'" "HO3'" sing N N 208 OMU "C5'" "O5'" sing N N 209 OMU "C5'" "H5'" sing N N 210 OMU "C5'" "H5''" sing N N 211 OMU "O5'" P sing N N 212 OMU P OP1 doub N N 213 OMU P OP2 sing N N 214 OMU P OP3 sing N N 215 OMU OP2 HOP2 sing N N 216 OMU OP3 HOP3 sing N N 217 # _ndb_struct_conf_na.entry_id 2DQO _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B G 9 1_555 0.276 -0.108 0.050 -1.279 2.333 1.598 1 A_DC1:G18_B A 1 ? B 18 ? 19 1 1 A OMU 2 1_555 B A 8 1_555 -0.542 -0.093 0.051 4.366 -8.114 11.938 2 A_OMU2:A17_B A 2 ? B 17 ? 20 1 1 A DC 3 1_555 B G 7 1_555 0.435 -0.303 0.106 2.320 -4.789 2.791 3 A_DC3:G16_B A 3 ? B 16 ? 19 1 1 A DT 4 1_555 B A 6 1_555 -0.091 -0.079 0.009 5.311 -5.007 2.242 4 A_DT4:A15_B A 4 ? B 15 ? 20 1 1 A OMU 5 1_555 B A 5 1_555 0.095 -0.062 -0.276 10.110 -15.094 9.346 5 A_OMU5:A14_B A 5 ? B 14 ? 20 1 1 A DC 6 1_555 B G 4 1_555 -0.273 -0.256 0.149 -2.128 -5.958 3.967 6 A_DC6:G13_B A 6 ? B 13 ? 19 1 1 A DT 7 1_555 B A 3 1_555 -0.225 -0.120 -0.560 4.992 -8.909 -2.140 7 A_DT7:A12_B A 7 ? B 12 ? 20 1 1 A DT 8 1_555 B A 2 1_555 -0.066 -0.170 -0.444 17.723 -11.279 4.357 8 A_DT8:A11_B A 8 ? B 11 ? 20 1 1 A DC 9 1_555 B G 1 1_555 0.701 -0.365 -0.303 14.617 1.789 -1.658 9 A_DC9:G10_B A 9 ? B 10 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B G 9 1_555 A OMU 2 1_555 B A 8 1_555 0.800 -2.219 3.116 -0.126 1.468 26.751 -5.144 -1.756 2.989 3.171 0.272 26.791 1 AA_DC1OMU2:A17G18_BB A 1 ? B 18 ? A 2 ? B 17 ? 1 A OMU 2 1_555 B A 8 1_555 A DC 3 1_555 B G 7 1_555 -0.897 -1.539 3.413 -1.012 4.988 33.771 -3.423 1.364 3.184 8.526 1.729 34.141 2 AA_OMU2DC3:G16A17_BB A 2 ? B 17 ? A 3 ? B 16 ? 1 A DC 3 1_555 B G 7 1_555 A DT 4 1_555 B A 6 1_555 -0.191 -1.684 3.186 -0.899 3.388 29.035 -4.030 0.194 2.979 6.726 1.785 29.241 3 AA_DC3DT4:A15G16_BB A 3 ? B 16 ? A 4 ? B 15 ? 1 A DT 4 1_555 B A 6 1_555 A OMU 5 1_555 B A 5 1_555 0.396 -1.388 3.110 2.840 4.976 30.689 -3.454 -0.237 2.879 9.300 -5.307 31.206 4 AA_DT4OMU5:A14A15_BB A 4 ? B 15 ? A 5 ? B 14 ? 1 A OMU 5 1_555 B A 5 1_555 A DC 6 1_555 B G 4 1_555 -0.449 -1.846 3.546 -4.325 12.785 28.885 -5.659 0.044 2.560 24.043 8.133 31.822 5 AA_OMU5DC6:G13A14_BB A 5 ? B 14 ? A 6 ? B 13 ? 1 A DC 6 1_555 B G 4 1_555 A DT 7 1_555 B A 3 1_555 -0.477 -1.178 3.127 6.949 8.976 29.655 -3.628 2.012 2.501 16.783 -12.993 31.708 6 AA_DC6DT7:A12G13_BB A 6 ? B 13 ? A 7 ? B 12 ? 1 A DT 7 1_555 B A 3 1_555 A DT 8 1_555 B A 2 1_555 0.833 -1.128 2.988 -0.122 6.077 30.154 -3.176 -1.593 2.711 11.534 0.232 30.747 7 AA_DT7DT8:A11A12_BB A 7 ? B 12 ? A 8 ? B 11 ? 1 A DT 8 1_555 B A 2 1_555 A DC 9 1_555 B G 1 1_555 -0.265 -1.559 3.545 -1.783 10.843 32.470 -4.380 0.166 2.900 18.735 3.081 34.231 8 AA_DT8DC9:G10A11_BB A 8 ? B 11 ? A 9 ? B 10 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SODIUM ION' NA 4 '(6-AMINOHEXYL)CARBAMIC ACID' CMY 5 'BARIUM ION' BA 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 479D _pdbx_initial_refinement_model.details 'PDB ENTRY 479D' #