0.017240 0.000000 0.000000 0.000000 0.017240 0.000000 0.000000 0.000000 0.002318 0.00000 0.00000 0.00000 Tomita, K. Ishitani, R. Fukai, S. Nureki, O. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 58.004 58.004 431.498 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C9 H16 N3 O14 P3 483.156 CYTIDINE-5'-TRIPHOSPHATE non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 R C N 12 N O N 13 R C Y 14 N N Y 15 N C Y 16 N N Y 17 N C Y 18 N C N 19 N N Y 20 N N Y 21 N C Y 22 N N Y 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N N N 39 S C N 40 N C N 41 N O N 42 N C N 43 N O N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N N N 52 S C N 53 N C N 54 N O N 55 N C N 56 N C N 57 N C N 58 N N N 59 N C N 60 N N N 61 N N N 62 N O N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N N N 79 S C N 80 N C N 81 N O N 82 N C N 83 N C N 84 N O N 85 N N N 86 N O N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N N N 96 S C N 97 N C N 98 N O N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N O N 112 N P N 113 N O N 114 N O N 115 N O N 116 N C N 117 R C N 118 N O N 119 S C N 120 N O N 121 R C N 122 N O N 123 R C N 124 N N N 125 N C N 126 N O N 127 N N N 128 N C N 129 N N N 130 N C N 131 N C N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N N N 147 N C N 148 N N N 149 N C N 150 N C N 151 N C N 152 N O N 153 N N N 154 R C N 155 R C N 156 N O N 157 S C N 158 R C N 159 N O N 160 N O N 161 N C N 162 N O N 163 S P N 164 N O N 165 N O N 166 N O N 167 R P N 168 N O N 169 N O N 170 N O N 171 N P N 172 N O N 173 N O N 174 N O N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 R C N 193 N C N 194 N O N 195 N C N 196 N S N 197 N O N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N O N 206 N P N 207 N O N 208 N O N 209 N O N 210 N C N 211 R C N 212 N O N 213 S C N 214 N O N 215 R C N 216 N O N 217 R C Y 218 N N Y 219 N C Y 220 N N Y 221 N C N 222 N C N 223 N O N 224 N N N 225 N C N 226 N N N 227 N N Y 228 N C N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N N N 244 S C N 245 N C N 246 N O N 247 N C N 248 N C N 249 N C N 250 N O N 251 N N N 252 N O N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N N N 264 S C N 265 N C N 266 N O N 267 N C N 268 N C N 269 N C N 270 N O N 271 N O N 272 N O N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N N N 283 N C N 284 N C N 285 N O N 286 N O N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N N N 293 S C N 294 N C N 295 N O N 296 N C Y 297 N C Y 298 N N Y 299 N C Y 300 N C Y 301 N N N 302 N O N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N O N 314 N H N 315 N H N 316 N N N 317 S C N 318 N C N 319 N O N 320 S C N 321 N C N 322 N C N 323 N C N 324 N O N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N N N 339 S C N 340 N C N 341 N O N 342 N C N 343 N C N 344 N C N 345 N C N 346 N O N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N N N 361 S C N 362 N C N 363 N O N 364 N C N 365 N C N 366 N C N 367 N C N 368 N N N 369 N O N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N N N 386 S C N 387 N C N 388 N O N 389 N C N 390 N C N 391 N S N 392 N C N 393 N O N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N MG N 406 N N N 407 S C N 408 N C N 409 N O N 410 N C Y 411 N C Y 412 N C Y 413 N C Y 414 N C Y 415 N C Y 416 N C N 417 N O N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N N N 430 S C N 431 N C N 432 N O N 433 N C N 434 N C N 435 N C N 436 N O N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N N N 447 S C N 448 N C N 449 N O N 450 N C N 451 N O N 452 N O N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N S N 461 N O N 462 N O N 463 N O N 464 N O N 465 N N N 466 S C N 467 N C N 468 N O N 469 R C N 470 N O N 471 N C N 472 N O N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 481 N H N 482 N N N 483 S C N 484 N C N 485 N O N 486 N C Y 487 N C Y 488 N C Y 489 N C Y 490 N N Y 491 N C Y 492 N C Y 493 N C Y 494 N C Y 495 N C N 496 N O N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N N N 510 S C N 511 N C N 512 N O N 513 N C Y 514 N C Y 515 N C Y 516 N C Y 517 N C Y 518 N C Y 519 N C N 520 N O N 521 N O N 522 N H N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N O N 534 N P N 535 N O N 536 N O N 537 N O N 538 N C N 539 R C N 540 N O N 541 S C N 542 N O N 543 R C N 544 N O N 545 R C N 546 N N N 547 N C N 548 N O N 549 N N N 550 N C N 551 N O N 552 N C N 553 N C N 554 N H N 555 N H N 556 N H N 557 N H N 558 N H N 559 N H N 560 N H N 561 N H N 562 N H N 563 N H N 564 N H N 565 N H N 566 N H N 567 N N N 568 S C N 569 N C N 570 N O N 571 N C N 572 N C N 573 N C N 574 N O N 575 N H N 576 N H N 577 N H N 578 N H N 579 N H N 580 N H N 581 N H N 582 N H N 583 N H N 584 N H N 585 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing Y 25 N sing Y 26 N sing Y 27 N doub N 28 N sing Y 29 N sing Y 30 N sing Y 31 N doub N 32 N sing Y 33 N doub N 34 N sing N 35 N sing Y 36 N sing Y 37 N doub N 38 N sing Y 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N doub N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N doub N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N doub N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N doub N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N doub N 150 N doub N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N doub N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N doub N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N doub N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing Y 228 N sing Y 229 N sing Y 230 N doub N 231 N sing Y 232 N sing N 233 N sing Y 234 N doub N 235 N doub N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N doub N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N doub N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N doub N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N doub N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N doub N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N doub N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing Y 301 N sing Y 302 N doub Y 303 N doub N 304 N sing Y 305 N sing N 306 N sing Y 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N doub N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N doub N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N doub N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N doub N 405 N sing N 406 N sing N 407 N sing N 408 N sing Y 409 N doub Y 410 N sing Y 411 N sing N 412 N sing Y 413 N doub N 414 N sing Y 415 N doub N 416 N sing Y 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N doub N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N doub N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N doub N 452 N doub N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N doub N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N doub N 478 N sing N 479 N sing N 480 N sing N 481 N sing Y 482 N doub Y 483 N sing Y 484 N sing N 485 N sing Y 486 N doub Y 487 N sing Y 488 N sing N 489 N sing Y 490 N sing Y 491 N doub N 492 N sing Y 493 N doub N 494 N sing Y 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N doub N 506 N sing N 507 N sing N 508 N sing N 509 N sing Y 510 N doub Y 511 N sing Y 512 N sing N 513 N sing Y 514 N doub N 515 N sing Y 516 N doub N 517 N sing Y 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing N 525 N doub N 526 N sing N 527 N sing N 528 N sing N 529 N sing N 530 N sing N 531 N sing N 532 N sing N 533 N sing N 534 N sing N 535 N sing N 536 N sing N 537 N sing N 538 N sing N 539 N sing N 540 N sing N 541 N sing N 542 N sing N 543 N sing N 544 N sing N 545 N sing N 546 N sing N 547 N sing N 548 N sing N 549 N doub N 550 N sing N 551 N sing N 552 N sing N 553 N doub N 554 N sing N 555 N doub N 556 N sing N 557 N sing N 558 N sing N 559 N sing N 560 N sing N 561 N sing N 562 N sing N 563 N sing N 564 N doub N 565 N sing N 566 N sing N 567 N sing N 568 N sing N 569 N sing N 570 N sing N 571 N sing N 572 N sing N 573 N sing N 574 N sing N 575 N sing UK Nature NATUAS 0006 0028-0836 443 956 960 10.1038/nature05204 17051158 Complete crystallographic analysis of the dynamics of CCA sequence addition 2006 10.2210/pdb2dvi/pdb pdb_00002dvi 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2005-05-17 ADSC QUANTUM 315 Si 111 CHANNEL SINGLE WAVELENGTH M x-ray 1 1 1.0 BL41XU SPring-8 1 SYNCHROTRON SPRING-8 BEAMLINE BL41XU 10904.503 tRNA (34-MER) 1 syn polymer 51469.137 CCA-adding enzyme 2.7.7.25, 2.7.7.21 1 man polymer 96.063 SULFATE ION 1 syn non-polymer 24.305 MAGNESIUM ION 1 syn non-polymer 483.156 CYTIDINE-5'-TRIPHOSPHATE 1 syn non-polymer 18.015 water 174 nat water tRNA nucleotidyltransferase, tRNA adenylyl-/cytidylyl-transferase, tRNA CCA-pyrophosphorylase, tRNA-NT no no GGCCCGGGGCGGUUCGAUUCCGCCCUGGGCCACC GGCCCGGGGCGGUUCGAUUCCGCCCUGGGCCACC B polyribonucleotide no no MKVEEILEKALELVIPDEEEVRKGREAEEELRRRLDELGVEYVFVGSYARNTWLKGSLEIDVFLLFPEEFSKEELRERGL EIGKAVLDSYEIRYAEHPYVHGVVKGVEVDVVPCYKLKEPKNIKSAVDRTPFHHKWLEGRIKGKENEVRLLKGFLKANGI YGAEYKVRGFSGYLCELLIVFYGSFLETVKNARRWTRRTVIDVAKGEVRKGEEFFVVDPVDEKRNVAANLSLDNLARFVH LCREFMEAPSLGFFKPKHPLEIEPERLRKIVEERGTAVFAVKFRKPDIVDDNLYPQLERASRKIFEFLERENFMPLRSAF KASEEFCYLLFECQIKEISRVFRRMGPQFEDERNVKKFLSRNRAFRPFIENGRWWAFEMRKFTTPEEGVRSYASTHWHTL GKNVGESIREYFEIISGEKLFKEPVTAELCEMMGVKD MKVEEILEKALELVIPDEEEVRKGREAEEELRRRLDELGVEYVFVGSYARNTWLKGSLEIDVFLLFPEEFSKEELRERGL EIGKAVLDSYEIRYAEHPYVHGVVKGVEVDVVPCYKLKEPKNIKSAVDRTPFHHKWLEGRIKGKENEVRLLKGFLKANGI YGAEYKVRGFSGYLCELLIVFYGSFLETVKNARRWTRRTVIDVAKGEVRKGEEFFVVDPVDEKRNVAANLSLDNLARFVH LCREFMEAPSLGFFKPKHPLEIEPERLRKIVEERGTAVFAVKFRKPDIVDDNLYPQLERASRKIFEFLERENFMPLRSAF KASEEFCYLLFECQIKEISRVFRRMGPQFEDERNVKKFLSRNRAFRPFIENGRWWAFEMRKFTTPEEGVRSYASTHWHTL GKNVGESIREYFEIISGEKLFKEPVTAELCEMMGVKD A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Archaeoglobus Escherichia Escherichia coli sample 2234 Archaeoglobus fulgidus 469008 Escherichia coli BL21(DE3) BL21(DE3) plasmid pET22b 1 2.91 57.71 VAPOR DIFFUSION 7.5 50mM HEPES, 20% PEG 3550, 0.2M Tri-Lithium citrate, 80mM (NH4)2SO4, pH 7.5, VAPOR DIFFUSION, temperature 293K 293 HEPES 1 PEG 3550 1 Tri-lithium citrate 1 ammonium sulphate 1 water 1 HEPES 2 PEG 3550 2 Tri-lithium citrate 2 ammonium sulphate 2 water 2 8.360 1 19 B 1 B 31 -2.144 B_G1:C31_B 1 -4.369 -0.167 0.560 0.018 8.751 1 19 B 2 B 30 0.661 B_G2:C30_B 2 -14.212 -0.342 0.236 -0.178 9.252 1 19 B 3 B 29 -0.039 B_C3:G29_B 3 -18.823 0.439 -0.102 -0.251 4.924 1 19 B 4 B 28 3.163 B_C4:G28_B 4 -11.458 0.312 -0.270 -0.033 4.488 1 19 B 5 B 27 2.676 B_C5:G27_B 5 -5.605 0.345 0.067 -0.222 -4.441 1 28 B 6 B 26 13.167 B_G6:U26_B 6 -7.131 -2.104 -0.636 -0.020 0.584 1 19 B 7 B 25 2.579 B_G7:C25_B 7 -6.760 -1.028 0.105 -0.280 -6.774 1 19 B 8 B 24 0.233 B_G8:C24_B 8 -15.123 0.829 -0.114 -0.171 -10.894 1 19 B 9 B 23 5.682 B_G9:C23_B 9 -11.460 -0.535 -0.124 -0.109 -1.729 1 19 B 10 B 22 -1.081 B_C10:G22_B 10 -5.748 0.458 0.204 -0.491 -2.886 1 19 B 11 B 21 -4.456 B_G11:C21_B 11 -10.164 0.173 0.144 -0.245 -11.593 1 19 B 12 B 20 1.918 B_G12:C20_B 12 -14.655 -0.180 -0.086 -0.199 -5.986 4 24 B 13 B 17 -85.112 B_U13:A17_B 13 5.311 4.079 -0.125 -2.055 3.010 33.875 B B 1 2 6.926 B B 31 30 3.191 4.026 -0.114 -1.402 BB_G1G2:C30C31_BB 1 -0.931 1.601 33.630 -3.022 0.054 3.261 36.697 B B 2 3 1.380 B B 30 29 3.307 0.869 -0.258 -1.602 BB_G2C3:G29C30_BB 2 1.109 -1.761 36.670 -2.664 0.563 2.570 29.960 B B 3 4 19.342 B B 29 28 3.337 9.818 -0.357 -1.879 BB_C3C4:G28G29_BB 3 -1.470 2.897 28.302 -5.519 0.409 2.786 30.654 B B 4 5 14.248 B B 28 27 3.300 7.440 -0.234 -1.779 BB_C4C5:G27G28_BB 4 -3.954 7.572 29.500 -4.757 -0.297 2.277 21.051 B B 5 6 28.082 B B 27 26 3.526 9.764 1.429 -2.345 BB_C5G6:U26G27_BB 5 4.999 -14.377 17.995 -10.354 -1.897 3.216 31.196 B B 6 7 1.838 B B 26 25 3.236 0.984 -0.507 -1.885 BB_G6G7:C25U26_BB 6 -5.031 9.395 30.783 -3.691 -0.007 2.990 41.863 B B 7 8 13.720 B B 25 24 3.486 9.711 -0.057 -1.768 BB_G7G8:C24C25_BB 7 3.504 -4.951 40.626 -3.496 0.449 2.124 26.906 B B 8 9 23.393 B B 24 23 3.178 10.586 0.594 -2.179 BB_G8G9:C23C24_BB 8 2.348 -5.188 24.661 -6.985 -0.767 3.201 32.161 B B 9 10 -1.274 B B 23 22 3.148 -0.706 0.386 -2.529 BB_G9C10:G22C23_BB 9 0.055 -0.099 32.154 -4.443 -0.687 2.522 24.165 B B 10 11 14.838 B B 22 21 3.104 6.145 -0.993 -1.976 BB_C10G11:C21G22_BB 10 -0.340 0.821 23.379 -6.432 2.277 3.166 34.229 B B 11 12 10.451 B B 21 20 3.498 6.116 0.509 -1.746 BB_G11G12:C20C21_BB 11 2.150 -3.674 33.628 -3.957 -0.516 3.184 81.092 B B 12 13 -1.261 B B 20 17 3.187 -1.640 -1.856 -2.012 BB_G12U13:A17C20_BB 12 1.921 -1.478 81.060 -1.506 1.476 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2006-11-14 1 1 2008-04-30 1 2 2011-07-13 1 3 2023-10-25 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id PDBJ Y PDBJ 2006-07-31 REL REL SO4 SULFATE ION MG MAGNESIUM ION CTP CYTIDINE-5'-TRIPHOSPHATE HOH water 2DR9 PDB experimental model SO4 601 3 SO4 SO4 601 A MG2 602 4 MG MG 602 A CTP 504 5 CTP CTP 504 A TIP 7 6 HOH HOH 35 B TIP 9 6 HOH HOH 36 B TIP 10 6 HOH HOH 37 B TIP 12 6 HOH HOH 38 B TIP 15 6 HOH HOH 39 B TIP 18 6 HOH HOH 40 B TIP 20 6 HOH HOH 41 B TIP 21 6 HOH HOH 42 B TIP 28 6 HOH HOH 43 B TIP 39 6 HOH HOH 44 B TIP 42 6 HOH HOH 45 B TIP 44 6 HOH HOH 46 B TIP 46 6 HOH HOH 47 B TIP 54 6 HOH HOH 48 B TIP 61 6 HOH HOH 49 B TIP 81 6 HOH HOH 50 B TIP 90 6 HOH HOH 51 B TIP 113 6 HOH HOH 52 B TIP 114 6 HOH HOH 53 B TIP 127 6 HOH HOH 54 B TIP 148 6 HOH HOH 55 B TIP 180 6 HOH HOH 56 B TIP 182 6 HOH HOH 57 B TIP 183 6 HOH HOH 58 B TIP 189 6 HOH HOH 59 B TIP 191 6 HOH HOH 60 B TIP 200 6 HOH HOH 61 B TIP 202 6 HOH HOH 62 B TIP 204 6 HOH HOH 63 B TIP 211 6 HOH HOH 64 B TIP 212 6 HOH HOH 65 B TIP 213 6 HOH HOH 66 B TIP 214 6 HOH HOH 67 B TIP 223 6 HOH HOH 68 B TIP 232 6 HOH HOH 69 B TIP 244 6 HOH HOH 70 B TIP 257 6 HOH HOH 71 B TIP 260 6 HOH HOH 72 B TIP 1 6 HOH HOH 603 A TIP 3 6 HOH HOH 604 A TIP 4 6 HOH HOH 605 A TIP 5 6 HOH HOH 606 A TIP 6 6 HOH HOH 607 A TIP 8 6 HOH HOH 608 A TIP 13 6 HOH HOH 609 A TIP 14 6 HOH HOH 610 A TIP 16 6 HOH HOH 611 A TIP 17 6 HOH HOH 612 A TIP 19 6 HOH HOH 613 A TIP 22 6 HOH HOH 614 A TIP 24 6 HOH HOH 615 A TIP 25 6 HOH HOH 616 A TIP 26 6 HOH HOH 617 A TIP 27 6 HOH HOH 618 A TIP 29 6 HOH HOH 619 A TIP 30 6 HOH HOH 620 A TIP 31 6 HOH HOH 621 A TIP 32 6 HOH HOH 622 A TIP 33 6 HOH HOH 623 A TIP 34 6 HOH HOH 624 A TIP 35 6 HOH HOH 625 A TIP 36 6 HOH HOH 626 A TIP 37 6 HOH HOH 627 A TIP 38 6 HOH HOH 628 A TIP 40 6 HOH HOH 629 A TIP 41 6 HOH HOH 630 A TIP 43 6 HOH HOH 631 A TIP 45 6 HOH HOH 632 A TIP 47 6 HOH HOH 633 A TIP 48 6 HOH HOH 634 A TIP 49 6 HOH HOH 635 A TIP 50 6 HOH HOH 636 A TIP 51 6 HOH HOH 637 A TIP 52 6 HOH HOH 638 A TIP 53 6 HOH HOH 639 A TIP 55 6 HOH HOH 640 A TIP 56 6 HOH HOH 641 A TIP 58 6 HOH HOH 642 A TIP 60 6 HOH HOH 643 A TIP 62 6 HOH HOH 644 A TIP 65 6 HOH HOH 645 A TIP 66 6 HOH HOH 646 A TIP 67 6 HOH HOH 647 A TIP 70 6 HOH HOH 648 A TIP 76 6 HOH HOH 649 A TIP 79 6 HOH HOH 650 A TIP 82 6 HOH HOH 651 A TIP 83 6 HOH HOH 652 A TIP 84 6 HOH HOH 653 A TIP 85 6 HOH HOH 654 A TIP 86 6 HOH HOH 655 A TIP 87 6 HOH HOH 656 A TIP 89 6 HOH HOH 657 A TIP 91 6 HOH HOH 658 A TIP 93 6 HOH HOH 659 A TIP 94 6 HOH HOH 660 A TIP 96 6 HOH HOH 661 A TIP 98 6 HOH HOH 662 A TIP 99 6 HOH HOH 663 A TIP 100 6 HOH HOH 664 A TIP 104 6 HOH HOH 665 A TIP 106 6 HOH HOH 666 A TIP 107 6 HOH HOH 667 A TIP 108 6 HOH HOH 668 A TIP 109 6 HOH HOH 669 A TIP 115 6 HOH HOH 670 A TIP 118 6 HOH HOH 671 A TIP 125 6 HOH HOH 672 A TIP 130 6 HOH HOH 673 A TIP 136 6 HOH HOH 674 A TIP 140 6 HOH HOH 675 A TIP 143 6 HOH HOH 676 A TIP 144 6 HOH HOH 677 A TIP 146 6 HOH HOH 678 A TIP 149 6 HOH HOH 679 A TIP 154 6 HOH HOH 680 A TIP 156 6 HOH HOH 681 A TIP 160 6 HOH HOH 682 A TIP 165 6 HOH HOH 683 A TIP 166 6 HOH HOH 684 A TIP 170 6 HOH HOH 685 A TIP 172 6 HOH HOH 686 A TIP 173 6 HOH HOH 687 A TIP 175 6 HOH HOH 688 A TIP 176 6 HOH HOH 689 A TIP 177 6 HOH HOH 690 A TIP 178 6 HOH HOH 691 A TIP 179 6 HOH HOH 692 A TIP 181 6 HOH HOH 693 A TIP 184 6 HOH HOH 694 A TIP 185 6 HOH HOH 695 A TIP 186 6 HOH HOH 696 A TIP 188 6 HOH HOH 697 A TIP 192 6 HOH HOH 698 A TIP 195 6 HOH HOH 699 A TIP 196 6 HOH HOH 700 A TIP 197 6 HOH HOH 701 A TIP 199 6 HOH HOH 702 A TIP 201 6 HOH HOH 703 A TIP 203 6 HOH HOH 704 A TIP 207 6 HOH HOH 705 A TIP 210 6 HOH HOH 706 A TIP 215 6 HOH HOH 707 A TIP 216 6 HOH HOH 708 A TIP 220 6 HOH HOH 709 A TIP 221 6 HOH HOH 710 A TIP 222 6 HOH HOH 711 A TIP 224 6 HOH HOH 712 A TIP 226 6 HOH HOH 713 A TIP 228 6 HOH HOH 714 A TIP 229 6 HOH HOH 715 A TIP 231 6 HOH HOH 716 A TIP 233 6 HOH HOH 717 A TIP 234 6 HOH HOH 718 A TIP 235 6 HOH HOH 719 A TIP 236 6 HOH HOH 720 A TIP 237 6 HOH HOH 721 A TIP 240 6 HOH HOH 722 A TIP 242 6 HOH HOH 723 A TIP 243 6 HOH HOH 724 A TIP 245 6 HOH HOH 725 A TIP 247 6 HOH HOH 726 A TIP 250 6 HOH HOH 727 A TIP 251 6 HOH HOH 728 A TIP 252 6 HOH HOH 729 A TIP 254 6 HOH HOH 730 A TIP 255 6 HOH HOH 731 A TIP 256 6 HOH HOH 732 A TIP 258 6 HOH HOH 733 A TIP 262 6 HOH HOH 734 A TIP 263 6 HOH HOH 735 A TIP 265 6 HOH HOH 736 A TIP 267 6 HOH HOH 737 A TIP 268 6 HOH HOH 738 A GUA 1 n 1 G 1 B GUA 2 n 2 G 2 B CYT 3 n 3 C 3 B CYT 4 n 4 C 4 B CYT 5 n 5 C 5 B GUA 6 n 6 G 6 B GUA 7 n 7 G 7 B GUA 8 n 8 G 8 B GUA 9 n 9 G 9 B CYT 10 n 10 C 10 B GUA 11 n 11 G 11 B GUA 12 n 12 G 12 B URI 13 n 13 U 13 B URI 14 n 14 U 14 B CYT 15 n 15 C 15 B GUA 16 n 16 G 16 B ADE 17 n 17 A 17 B URI 18 n 18 U 18 B URI 19 n 19 U 19 B CYT 20 n 20 C 20 B CYT 21 n 21 C 21 B GUA 22 n 22 G 22 B CYT 23 n 23 C 23 B CYT 24 n 24 C 24 B CYT 25 n 25 C 25 B URI 26 n 26 U 26 B GUA 27 n 27 G 27 B GUA 28 n 28 G 28 B GUA 29 n 29 G 29 B CYT 30 n 30 C 30 B CYT 31 n 31 C 31 B ADE 32 n 32 A 32 B CYT 33 n 33 C 33 B CYT 34 n 34 C 34 B n 1 1 A n 2 2 A VAL 3 n 3 VAL 3 A GLU 4 n 4 GLU 4 A GLU 5 n 5 GLU 5 A ILE 6 n 6 ILE 6 A LEU 7 n 7 LEU 7 A GLU 8 n 8 GLU 8 A LYS 9 n 9 LYS 9 A ALA 10 n 10 ALA 10 A LEU 11 n 11 LEU 11 A GLU 12 n 12 GLU 12 A LEU 13 n 13 LEU 13 A VAL 14 n 14 VAL 14 A ILE 15 n 15 ILE 15 A PRO 16 n 16 PRO 16 A ASP 17 n 17 ASP 17 A GLU 18 n 18 GLU 18 A GLU 19 n 19 GLU 19 A GLU 20 n 20 GLU 20 A VAL 21 n 21 VAL 21 A ARG 22 n 22 ARG 22 A LYS 23 n 23 LYS 23 A GLY 24 n 24 GLY 24 A ARG 25 n 25 ARG 25 A GLU 26 n 26 GLU 26 A ALA 27 n 27 ALA 27 A GLU 28 n 28 GLU 28 A GLU 29 n 29 GLU 29 A GLU 30 n 30 GLU 30 A LEU 31 n 31 LEU 31 A ARG 32 n 32 ARG 32 A ARG 33 n 33 ARG 33 A ARG 34 n 34 ARG 34 A LEU 35 n 35 LEU 35 A ASP 36 n 36 ASP 36 A GLU 37 n 37 GLU 37 A LEU 38 n 38 LEU 38 A GLY 39 n 39 GLY 39 A VAL 40 n 40 VAL 40 A GLU 41 n 41 GLU 41 A TYR 42 n 42 TYR 42 A VAL 43 n 43 VAL 43 A PHE 44 n 44 PHE 44 A VAL 45 n 45 VAL 45 A GLY 46 n 46 GLY 46 A SER 47 n 47 SER 47 A TYR 48 n 48 TYR 48 A ALA 49 n 49 ALA 49 A ARG 50 n 50 ARG 50 A ASN 51 n 51 ASN 51 A THR 52 n 52 THR 52 A TRP 53 n 53 TRP 53 A LEU 54 n 54 LEU 54 A LYS 55 n 55 LYS 55 A GLY 56 n 56 GLY 56 A SER 57 n 57 SER 57 A LEU 58 n 58 LEU 58 A GLU 59 n 59 GLU 59 A ILE 60 n 60 ILE 60 A ASP 61 n 61 ASP 61 A VAL 62 n 62 VAL 62 A PHE 63 n 63 PHE 63 A LEU 64 n 64 LEU 64 A LEU 65 n 65 LEU 65 A PHE 66 n 66 PHE 66 A PRO 67 n 67 PRO 67 A GLU 68 n 68 GLU 68 A GLU 69 n 69 GLU 69 A PHE 70 n 70 PHE 70 A SER 71 n 71 SER 71 A LYS 72 n 72 LYS 72 A GLU 73 n 73 GLU 73 A GLU 74 n 74 GLU 74 A LEU 75 n 75 LEU 75 A ARG 76 n 76 ARG 76 A GLU 77 n 77 GLU 77 A ARG 78 n 78 ARG 78 A GLY 79 n 79 GLY 79 A LEU 80 n 80 LEU 80 A GLU 81 n 81 GLU 81 A ILE 82 n 82 ILE 82 A GLY 83 n 83 GLY 83 A LYS 84 n 84 LYS 84 A ALA 85 n 85 ALA 85 A VAL 86 n 86 VAL 86 A LEU 87 n 87 LEU 87 A ASP 88 n 88 ASP 88 A SER 89 n 89 SER 89 A TYR 90 n 90 TYR 90 A GLU 91 n 91 GLU 91 A ILE 92 n 92 ILE 92 A ARG 93 n 93 ARG 93 A TYR 94 n 94 TYR 94 A ALA 95 n 95 ALA 95 A GLU 96 n 96 GLU 96 A HIS 97 n 97 HIS 97 A PRO 98 n 98 PRO 98 A TYR 99 n 99 TYR 99 A VAL 100 n 100 VAL 100 A HIS 101 n 101 HIS 101 A GLY 102 n 102 GLY 102 A VAL 103 n 103 VAL 103 A VAL 104 n 104 VAL 104 A LYS 105 n 105 LYS 105 A GLY 106 n 106 GLY 106 A VAL 107 n 107 VAL 107 A GLU 108 n 108 GLU 108 A VAL 109 n 109 VAL 109 A ASP 110 n 110 ASP 110 A VAL 111 n 111 VAL 111 A VAL 112 n 112 VAL 112 A PRO 113 n 113 PRO 113 A CYS 114 n 114 CYS 114 A TYR 115 n 115 TYR 115 A LYS 116 n 116 LYS 116 A LEU 117 n 117 LEU 117 A LYS 118 n 118 LYS 118 A GLU 119 n 119 GLU 119 A PRO 120 n 120 PRO 120 A LYS 121 n 121 LYS 121 A ASN 122 n 122 ASN 122 A ILE 123 n 123 ILE 123 A LYS 124 n 124 LYS 124 A SER 125 n 125 SER 125 A ALA 126 n 126 ALA 126 A VAL 127 n 127 VAL 127 A ASP 128 n 128 ASP 128 A ARG 129 n 129 ARG 129 A THR 130 n 130 THR 130 A PRO 131 n 131 PRO 131 A PHE 132 n 132 PHE 132 A HIS 133 n 133 HIS 133 A HIS 134 n 134 HIS 134 A LYS 135 n 135 LYS 135 A TRP 136 n 136 TRP 136 A LEU 137 n 137 LEU 137 A GLU 138 n 138 GLU 138 A GLY 139 n 139 GLY 139 A ARG 140 n 140 ARG 140 A ILE 141 n 141 ILE 141 A LYS 142 n 142 LYS 142 A GLY 143 n 143 GLY 143 A LYS 144 n 144 LYS 144 A GLU 145 n 145 GLU 145 A ASN 146 n 146 ASN 146 A GLU 147 n 147 GLU 147 A VAL 148 n 148 VAL 148 A ARG 149 n 149 ARG 149 A LEU 150 n 150 LEU 150 A LEU 151 n 151 LEU 151 A LYS 152 n 152 LYS 152 A GLY 153 n 153 GLY 153 A PHE 154 n 154 PHE 154 A LEU 155 n 155 LEU 155 A LYS 156 n 156 LYS 156 A ALA 157 n 157 ALA 157 A ASN 158 n 158 ASN 158 A GLY 159 n 159 GLY 159 A ILE 160 n 160 ILE 160 A TYR 161 n 161 TYR 161 A GLY 162 n 162 GLY 162 A ALA 163 n 163 ALA 163 A GLU 164 n 164 GLU 164 A TYR 165 n 165 TYR 165 A LYS 166 n 166 LYS 166 A VAL 167 n 167 VAL 167 A ARG 168 n 168 ARG 168 A GLY 169 n 169 GLY 169 A PHE 170 n 170 PHE 170 A SER 171 n 171 SER 171 A GLY 172 n 172 GLY 172 A TYR 173 n 173 TYR 173 A LEU 174 n 174 LEU 174 A CYS 175 n 175 CYS 175 A GLU 176 n 176 GLU 176 A LEU 177 n 177 LEU 177 A LEU 178 n 178 LEU 178 A ILE 179 n 179 ILE 179 A VAL 180 n 180 VAL 180 A PHE 181 n 181 PHE 181 A TYR 182 n 182 TYR 182 A GLY 183 n 183 GLY 183 A SER 184 n 184 SER 184 A PHE 185 n 185 PHE 185 A LEU 186 n 186 LEU 186 A GLU 187 n 187 GLU 187 A THR 188 n 188 THR 188 A VAL 189 n 189 VAL 189 A LYS 190 n 190 LYS 190 A ASN 191 n 191 ASN 191 A ALA 192 n 192 ALA 192 A ARG 193 n 193 ARG 193 A ARG 194 n 194 ARG 194 A TRP 195 n 195 TRP 195 A THR 196 n 196 THR 196 A ARG 197 n 197 ARG 197 A ARG 198 n 198 ARG 198 A THR 199 n 199 THR 199 A VAL 200 n 200 VAL 200 A ILE 201 n 201 ILE 201 A ASP 202 n 202 ASP 202 A VAL 203 n 203 VAL 203 A ALA 204 n 204 ALA 204 A LYS 205 n 205 LYS 205 A GLY 206 n 206 GLY 206 A GLU 207 n 207 GLU 207 A VAL 208 n 208 VAL 208 A ARG 209 n 209 ARG 209 A LYS 210 n 210 LYS 210 A GLY 211 n 211 GLY 211 A GLU 212 n 212 GLU 212 A GLU 213 n 213 GLU 213 A PHE 214 n 214 PHE 214 A PHE 215 n 215 PHE 215 A VAL 216 n 216 VAL 216 A VAL 217 n 217 VAL 217 A ASP 218 n 218 ASP 218 A PRO 219 n 219 PRO 219 A VAL 220 n 220 VAL 220 A ASP 221 n 221 ASP 221 A GLU 222 n 222 GLU 222 A LYS 223 n 223 LYS 223 A ARG 224 n 224 ARG 224 A ASN 225 n 225 ASN 225 A VAL 226 n 226 VAL 226 A ALA 227 n 227 ALA 227 A ALA 228 n 228 ALA 228 A ASN 229 n 229 ASN 229 A LEU 230 n 230 LEU 230 A SER 231 n 231 SER 231 A LEU 232 n 232 LEU 232 A ASP 233 n 233 ASP 233 A ASN 234 n 234 ASN 234 A LEU 235 n 235 LEU 235 A ALA 236 n 236 ALA 236 A ARG 237 n 237 ARG 237 A PHE 238 n 238 PHE 238 A VAL 239 n 239 VAL 239 A HIS 240 n 240 HIS 240 A LEU 241 n 241 LEU 241 A CYS 242 n 242 CYS 242 A ARG 243 n 243 ARG 243 A GLU 244 n 244 GLU 244 A PHE 245 n 245 PHE 245 A MET 246 n 246 MET 246 A GLU 247 n 247 GLU 247 A ALA 248 n 248 ALA 248 A PRO 249 n 249 PRO 249 A SER 250 n 250 SER 250 A LEU 251 n 251 LEU 251 A GLY 252 n 252 GLY 252 A PHE 253 n 253 PHE 253 A PHE 254 n 254 PHE 254 A LYS 255 n 255 LYS 255 A PRO 256 n 256 PRO 256 A LYS 257 n 257 LYS 257 A n 258 258 A n 259 259 A n 260 260 A n 261 261 A ILE 262 n 262 ILE 262 A GLU 263 n 263 GLU 263 A PRO 264 n 264 PRO 264 A GLU 265 n 265 GLU 265 A ARG 266 n 266 ARG 266 A LEU 267 n 267 LEU 267 A ARG 268 n 268 ARG 268 A LYS 269 n 269 LYS 269 A ILE 270 n 270 ILE 270 A VAL 271 n 271 VAL 271 A GLU 272 n 272 GLU 272 A GLU 273 n 273 GLU 273 A ARG 274 n 274 ARG 274 A GLY 275 n 275 GLY 275 A THR 276 n 276 THR 276 A ALA 277 n 277 ALA 277 A VAL 278 n 278 VAL 278 A PHE 279 n 279 PHE 279 A ALA 280 n 280 ALA 280 A VAL 281 n 281 VAL 281 A LYS 282 n 282 LYS 282 A PHE 283 n 283 PHE 283 A ARG 284 n 284 ARG 284 A LYS 285 n 285 LYS 285 A PRO 286 n 286 PRO 286 A ASP 287 n 287 ASP 287 A ILE 288 n 288 ILE 288 A VAL 289 n 289 VAL 289 A ASP 290 n 290 ASP 290 A ASP 291 n 291 ASP 291 A ASN 292 n 292 ASN 292 A LEU 293 n 293 LEU 293 A TYR 294 n 294 TYR 294 A PRO 295 n 295 PRO 295 A GLN 296 n 296 GLN 296 A LEU 297 n 297 LEU 297 A GLU 298 n 298 GLU 298 A ARG 299 n 299 ARG 299 A ALA 300 n 300 ALA 300 A SER 301 n 301 SER 301 A ARG 302 n 302 ARG 302 A LYS 303 n 303 LYS 303 A ILE 304 n 304 ILE 304 A PHE 305 n 305 PHE 305 A GLU 306 n 306 GLU 306 A PHE 307 n 307 PHE 307 A LEU 308 n 308 LEU 308 A GLU 309 n 309 GLU 309 A ARG 310 n 310 ARG 310 A GLU 311 n 311 GLU 311 A ASN 312 n 312 ASN 312 A PHE 313 n 313 PHE 313 A MET 314 n 314 MET 314 A PRO 315 n 315 PRO 315 A LEU 316 n 316 LEU 316 A ARG 317 n 317 ARG 317 A SER 318 n 318 SER 318 A ALA 319 n 319 ALA 319 A PHE 320 n 320 PHE 320 A LYS 321 n 321 LYS 321 A ALA 322 n 322 ALA 322 A SER 323 n 323 SER 323 A GLU 324 n 324 GLU 324 A GLU 325 n 325 GLU 325 A PHE 326 n 326 PHE 326 A CYS 327 n 327 CYS 327 A TYR 328 n 328 TYR 328 A LEU 329 n 329 LEU 329 A LEU 330 n 330 LEU 330 A PHE 331 n 331 PHE 331 A GLU 332 n 332 GLU 332 A CYS 333 n 333 CYS 333 A GLN 334 n 334 GLN 334 A ILE 335 n 335 ILE 335 A LYS 336 n 336 LYS 336 A GLU 337 n 337 GLU 337 A ILE 338 n 338 ILE 338 A SER 339 n 339 SER 339 A ARG 340 n 340 ARG 340 A VAL 341 n 341 VAL 341 A PHE 342 n 342 PHE 342 A ARG 343 n 343 ARG 343 A ARG 344 n 344 ARG 344 A MET 345 n 345 MET 345 A GLY 346 n 346 GLY 346 A PRO 347 n 347 PRO 347 A GLN 348 n 348 GLN 348 A PHE 349 n 349 PHE 349 A GLU 350 n 350 GLU 350 A ASP 351 n 351 ASP 351 A GLU 352 n 352 GLU 352 A ARG 353 n 353 ARG 353 A ASN 354 n 354 ASN 354 A VAL 355 n 355 VAL 355 A LYS 356 n 356 LYS 356 A LYS 357 n 357 LYS 357 A PHE 358 n 358 PHE 358 A LEU 359 n 359 LEU 359 A SER 360 n 360 SER 360 A ARG 361 n 361 ARG 361 A ASN 362 n 362 ASN 362 A ARG 363 n 363 ARG 363 A ALA 364 n 364 ALA 364 A PHE 365 n 365 PHE 365 A ARG 366 n 366 ARG 366 A PRO 367 n 367 PRO 367 A PHE 368 n 368 PHE 368 A ILE 369 n 369 ILE 369 A GLU 370 n 370 GLU 370 A ASN 371 n 371 ASN 371 A GLY 372 n 372 GLY 372 A ARG 373 n 373 ARG 373 A TRP 374 n 374 TRP 374 A TRP 375 n 375 TRP 375 A ALA 376 n 376 ALA 376 A PHE 377 n 377 PHE 377 A GLU 378 n 378 GLU 378 A MET 379 n 379 MET 379 A ARG 380 n 380 ARG 380 A LYS 381 n 381 LYS 381 A PHE 382 n 382 PHE 382 A THR 383 n 383 THR 383 A THR 384 n 384 THR 384 A PRO 385 n 385 PRO 385 A GLU 386 n 386 GLU 386 A GLU 387 n 387 GLU 387 A GLY 388 n 388 GLY 388 A VAL 389 n 389 VAL 389 A ARG 390 n 390 ARG 390 A SER 391 n 391 SER 391 A TYR 392 n 392 TYR 392 A ALA 393 n 393 ALA 393 A SER 394 n 394 SER 394 A THR 395 n 395 THR 395 A HIS 396 n 396 HIS 396 A TRP 397 n 397 TRP 397 A HIS 398 n 398 HIS 398 A THR 399 n 399 THR 399 A LEU 400 n 400 LEU 400 A GLY 401 n 401 GLY 401 A LYS 402 n 402 LYS 402 A ASN 403 n 403 ASN 403 A VAL 404 n 404 VAL 404 A GLY 405 n 405 GLY 405 A GLU 406 n 406 GLU 406 A SER 407 n 407 SER 407 A ILE 408 n 408 ILE 408 A ARG 409 n 409 ARG 409 A GLU 410 n 410 GLU 410 A TYR 411 n 411 TYR 411 A PHE 412 n 412 PHE 412 A GLU 413 n 413 GLU 413 A ILE 414 n 414 ILE 414 A ILE 415 n 415 ILE 415 A SER 416 n 416 SER 416 A GLY 417 n 417 GLY 417 A GLU 418 n 418 GLU 418 A LYS 419 n 419 LYS 419 A LEU 420 n 420 LEU 420 A PHE 421 n 421 PHE 421 A LYS 422 n 422 LYS 422 A GLU 423 n 423 GLU 423 A PRO 424 n 424 PRO 424 A VAL 425 n 425 VAL 425 A THR 426 n 426 THR 426 A ALA 427 n 427 ALA 427 A GLU 428 n 428 GLU 428 A LEU 429 n 429 LEU 429 A CYS 430 n 430 CYS 430 A GLU 431 n 431 GLU 431 A MET 432 n 432 MET 432 A MET 433 n 433 MET 433 A GLY 434 n 434 GLY 434 A VAL 435 n 435 VAL 435 A LYS 436 n 436 LYS 436 A ASP 437 n 437 ASP 437 A author_defined_assembly 2 dimeric A GLU 59 B O GLU 59 1_555 A MG 602 D MG MG 1_555 A ASP 61 B OD2 ASP 61 1_555 81.3 A GLU 59 B O GLU 59 1_555 A MG 602 D MG MG 1_555 A CTP 504 E O1G CTP 1_555 118.9 A ASP 61 B OD2 ASP 61 1_555 A MG 602 D MG MG 1_555 A CTP 504 E O1G CTP 1_555 126.7 A GLU 59 B O GLU 59 1_555 A MG 602 D MG MG 1_555 A CTP 504 E O1A CTP 1_555 141.2 A ASP 61 B OD2 ASP 61 1_555 A MG 602 D MG MG 1_555 A CTP 504 E O1A CTP 1_555 61.2 A CTP 504 E O1G CTP 1_555 A MG 602 D MG MG 1_555 A CTP 504 E O1A CTP 1_555 93.2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N VAL 43 B N VAL 43 A O PHE 63 B O PHE 63 A N VAL 62 B N VAL 62 A O VAL 112 B O VAL 112 A O VAL 109 B O VAL 109 A N GLY 102 B N GLY 102 A O HIS 101 B O HIS 101 A N GLU 91 B N GLU 91 A O ARG 209 B O ARG 209 A N VAL 200 B N VAL 200 A N ILE 201 B N ILE 201 A O PHE 215 B O PHE 215 A N LEU 316 B N LEU 316 A O GLU 332 B O GLU 332 A O CYS 333 B O CYS 333 A N ALA 277 B N ALA 277 A N LYS 282 B N LYS 282 A O GLU 413 B O GLU 413 A N ARG 344 B N ARG 344 A O ALA 376 B O ALA 376 A O ARG 373 B O ARG 373 A N GLU 370 B N GLU 370 1 A MET 1 B MET 1 1 Y 1 A LYS 2 B LYS 2 1 Y 1 A HIS 258 B HIS 258 1 Y 1 A PRO 259 B PRO 259 1 Y 1 A LEU 260 B LEU 260 1 Y 1 A GLU 261 B GLU 261 1 Y 1 A A O O TYR PHE 161 170 2.00 1 B B P OP3 G G 1 1 -0.081 0.012 1.607 1.526 N 1 A A O O PHE GLY 365 434 2.06 1_555 7_555 1 A GLU 4 -28.15 -52.37 1 A GLU 96 -140.05 -70.91 1 A GLU 119 67.19 109.76 1 A PRO 249 -50.37 98.35 1 A LEU 316 -92.35 -68.75 1 A GLU 325 -93.71 -64.58 1 A ARG 366 77.97 114.55 1 A TYR 411 174.79 134.98 1 A PRO 424 -72.66 36.73 protein_rep.param protein.top dna-rna_rep.param dna-rna.top water_rep.param water.top ion.param ion.top atp2.param atp2.top 45.3 -0.38 0.00 0.00 -0.38 0.00 0.75 0.252 0.008 0.207 0.207 2.61 9.99 1083 22537 22537 4.8 96.2 RANDOM 1934818.03 0.000000 1 RESTRAINED THROUGHOUT 0.0 MOLECULAR REPLACEMENT 2DR9 Engh & Huber FLAT MODEL 41.8752 0.406663 0.38 0.29 5.00 0.36 0.26 2.61 9.99 174 4512 35 724 3579 0.006 1.2 20.4 1.00 1.37 1.50 2.31 2.00 2.15 2.00 3.33 2.50 0.296 0.023 0.239 2.76 164 3305 6 4.7 89.7 34.7 2.6 50 2DVI 23070 23070 0 0 1 96.1 2.6 2.64 95.8 refinement CNS 1.1 data reduction DENZO data scaling SCALEPACK phasing MOLREP Complex structure of CCA-adding enzyme, mini-DCC and CTP 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 6 N N A VAL 3 B VAL 3 HELX_P A ILE 15 B ILE 15 1 1 13 A ASP 17 B ASP 17 HELX_P A GLY 39 B GLY 39 1 2 23 A GLY 46 B GLY 46 HELX_P A ARG 50 B ARG 50 1 3 5 A SER 71 B SER 71 HELX_P A LEU 87 B LEU 87 1 4 17 A ARG 129 B ARG 129 HELX_P A LYS 142 B LYS 142 1 5 14 A LYS 144 B LYS 144 HELX_P A ASN 158 B ASN 158 1 6 15 A SER 171 B SER 171 HELX_P A GLY 183 B GLY 183 1 7 13 A SER 184 B SER 184 HELX_P A ARG 193 B ARG 193 1 8 10 A SER 231 B SER 231 HELX_P A ALA 248 B ALA 248 1 9 18 A SER 250 B SER 250 HELX_P A LYS 255 B LYS 255 5 10 6 A GLU 263 B GLU 263 HELX_P A GLY 275 B GLY 275 1 11 13 A VAL 289 B VAL 289 HELX_P A GLU 311 B GLU 311 1 12 23 A ASP 351 B ASP 351 HELX_P A ARG 361 B ARG 361 1 13 11 A THR 384 B THR 384 HELX_P A HIS 396 B HIS 396 1 14 13 A TRP 397 B TRP 397 HELX_P A LEU 400 B LEU 400 5 15 4 A GLY 401 B GLY 401 HELX_P A TYR 411 B TYR 411 1 16 11 A SER 416 B SER 416 HELX_P A PHE 421 B PHE 421 1 17 6 A VAL 425 B VAL 425 HELX_P A GLY 434 B GLY 434 1 18 10 metalc 2.787 A GLU 59 B O GLU 59 1_555 A MG 602 D MG MG 1_555 metalc 2.903 A ASP 61 B OD2 ASP 61 1_555 A MG 602 D MG MG 1_555 metalc 2.607 A CTP 504 E O1G CTP 1_555 A MG 602 D MG MG 1_555 metalc 2.925 A CTP 504 E O1A CTP 1_555 A MG 602 D MG MG 1_555 hydrog WATSON-CRICK B G 1 A N1 G 1 1_555 B C 31 A N3 C 31 1_555 hydrog WATSON-CRICK B G 1 A N2 G 1 1_555 B C 31 A O2 C 31 1_555 hydrog WATSON-CRICK B G 1 A O6 G 1 1_555 B C 31 A N4 C 31 1_555 hydrog WATSON-CRICK B G 2 A N1 G 2 1_555 B C 30 A N3 C 30 1_555 hydrog WATSON-CRICK B G 2 A N2 G 2 1_555 B C 30 A O2 C 30 1_555 hydrog WATSON-CRICK B G 2 A O6 G 2 1_555 B C 30 A N4 C 30 1_555 hydrog WATSON-CRICK B C 3 A N3 C 3 1_555 B G 29 A N1 G 29 1_555 hydrog WATSON-CRICK B C 3 A N4 C 3 1_555 B G 29 A O6 G 29 1_555 hydrog WATSON-CRICK B C 3 A O2 C 3 1_555 B G 29 A N2 G 29 1_555 hydrog WATSON-CRICK B C 4 A N3 C 4 1_555 B G 28 A N1 G 28 1_555 hydrog WATSON-CRICK B C 4 A N4 C 4 1_555 B G 28 A O6 G 28 1_555 hydrog WATSON-CRICK B C 4 A O2 C 4 1_555 B G 28 A N2 G 28 1_555 hydrog WATSON-CRICK B C 5 A N3 C 5 1_555 B G 27 A N1 G 27 1_555 hydrog WATSON-CRICK B C 5 A N4 C 5 1_555 B G 27 A O6 G 27 1_555 hydrog WATSON-CRICK B C 5 A O2 C 5 1_555 B G 27 A N2 G 27 1_555 hydrog TYPE_28_PAIR B G 6 A N1 G 6 1_555 B U 26 A O2 U 26 1_555 hydrog TYPE_28_PAIR B G 6 A O6 G 6 1_555 B U 26 A N3 U 26 1_555 hydrog WATSON-CRICK B G 7 A N1 G 7 1_555 B C 25 A N3 C 25 1_555 hydrog WATSON-CRICK B G 7 A N2 G 7 1_555 B C 25 A O2 C 25 1_555 hydrog WATSON-CRICK B G 7 A O6 G 7 1_555 B C 25 A N4 C 25 1_555 hydrog WATSON-CRICK B G 8 A N1 G 8 1_555 B C 24 A N3 C 24 1_555 hydrog WATSON-CRICK B G 8 A N2 G 8 1_555 B C 24 A O2 C 24 1_555 hydrog WATSON-CRICK B G 8 A O6 G 8 1_555 B C 24 A N4 C 24 1_555 hydrog WATSON-CRICK B G 9 A N1 G 9 1_555 B C 23 A N3 C 23 1_555 hydrog WATSON-CRICK B G 9 A N2 G 9 1_555 B C 23 A O2 C 23 1_555 hydrog WATSON-CRICK B G 9 A O6 G 9 1_555 B C 23 A N4 C 23 1_555 hydrog WATSON-CRICK B C 10 A N3 C 10 1_555 B G 22 A N1 G 22 1_555 hydrog WATSON-CRICK B C 10 A N4 C 10 1_555 B G 22 A O6 G 22 1_555 hydrog WATSON-CRICK B C 10 A O2 C 10 1_555 B G 22 A N2 G 22 1_555 hydrog WATSON-CRICK B G 11 A N1 G 11 1_555 B C 21 A N3 C 21 1_555 hydrog WATSON-CRICK B G 11 A N2 G 11 1_555 B C 21 A O2 C 21 1_555 hydrog WATSON-CRICK B G 11 A O6 G 11 1_555 B C 21 A N4 C 21 1_555 hydrog WATSON-CRICK B G 12 A N1 G 12 1_555 B C 20 A N3 C 20 1_555 hydrog WATSON-CRICK B G 12 A N2 G 12 1_555 B C 20 A O2 C 20 1_555 hydrog WATSON-CRICK B G 12 A O6 G 12 1_555 B C 20 A N4 C 20 1_555 hydrog REVERSED HOOGSTEEN B U 13 A N3 U 13 1_555 B A 17 A N7 A 17 1_555 hydrog REVERSED HOOGSTEEN B U 13 A O2 U 13 1_555 B A 17 A N6 A 17 1_555 TRANSFERASE/RNA protein-rna complex, TRANSFERASE-RNA COMPLEX CCA_ARCFU UNP 2 1 O28126 2DVI PDB 1 2DVI 1 437 2DVI 1 437 O28126 A 1 1 437 1 34 2DVI 1 34 2DVI B 2 1 34 5 3 4 3 anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A TYR 42 B TYR 42 A VAL 45 B VAL 45 A GLU 59 B GLU 59 A PHE 66 B PHE 66 A VAL 107 B VAL 107 A TYR 115 B TYR 115 A VAL 100 B VAL 100 A VAL 104 B VAL 104 A SER 89 B SER 89 A GLU 91 B GLU 91 A GLU 207 B GLU 207 A LYS 210 B LYS 210 A THR 199 B THR 199 A ASP 202 B ASP 202 A PHE 215 B PHE 215 A VAL 217 B VAL 217 A PRO 315 B PRO 315 A ALA 322 B ALA 322 A PHE 326 B PHE 326 A CYS 333 B CYS 333 A ALA 277 B ALA 277 A ARG 284 B ARG 284 A GLU 413 B GLU 413 A ILE 415 B ILE 415 A VAL 341 B VAL 341 A GLN 348 B GLN 348 A ARG 373 B ARG 373 A MET 379 B MET 379 A PHE 368 B PHE 368 A GLU 370 B GLU 370 BINDING SITE FOR RESIDUE SO4 A 601 A SO4 601 Software 3 BINDING SITE FOR RESIDUE MG A 602 A MG 602 Software 3 BINDING SITE FOR RESIDUE CTP A 504 A CTP 504 Software 16 A ARG 299 B ARG 299 3 1_555 A ARG 302 B ARG 302 3 1_555 A LYS 303 B LYS 303 3 1_555 A GLU 59 B GLU 59 3 1_555 A ASP 61 B ASP 61 3 1_555 A CTP 504 E CTP 3 1_555 A GLY 46 B GLY 46 16 1_555 A SER 47 B SER 47 16 1_555 A ARG 50 B ARG 50 16 1_555 A ASP 61 B ASP 61 16 1_555 A THR 130 B THR 130 16 1_555 A HIS 133 B HIS 133 16 1_555 A LYS 152 B LYS 152 16 1_555 A TYR 161 B TYR 161 16 1_555 A TYR 173 B TYR 173 16 1_555 A MG 602 D MG 16 1_555 A HOH 692 G HOH 16 1_555 A HOH 704 G HOH 16 1_555 A HOH 732 G HOH 16 1_555 B A 32 A A 32 16 1_555 B C 33 A C 33 16 1_555 B C 34 A C 34 16 1_555 96 P 43 21 2