0.013376 0.007722 0.000000 0.000000 0.015445 0.000000 0.000000 0.000000 0.014267 0.00000 0.00000 0.00000 Blanchard, H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 74.762 74.762 70.090 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C3 H8 O 60.095 ISOPROPYL ALCOHOL 2-PROPANOL non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N C N 138 N O N 139 N C N 140 N O N 141 N C N 142 N O N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N N N 152 S C N 153 N C N 154 N O N 155 N C Y 156 N C Y 157 N N Y 158 N C Y 159 N C Y 160 N N N 161 N O N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N O N 173 N H N 174 N H N 175 N N N 176 S C N 177 N C N 178 N O N 179 S C N 180 N C N 181 N C N 182 N C N 183 N O N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N C N 198 N C N 199 N C N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N N N 210 S C N 211 N C N 212 N O N 213 N C N 214 N C N 215 N C N 216 N C N 217 N O N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N C N 238 N C N 239 N N N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N N N 257 S C N 258 N C N 259 N O N 260 N C N 261 N C N 262 N S N 263 N C N 264 N O N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C Y 281 N C Y 282 N C Y 283 N C Y 284 N C Y 285 N C Y 286 N C N 287 N O N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N N N 300 S C N 301 N C N 302 N O N 303 N C N 304 N C N 305 N C N 306 N O N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N N N 317 S C N 318 N C N 319 N O N 320 N C N 321 N O N 322 N O N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N N N 331 S C N 332 N C N 333 N O N 334 R C N 335 N O N 336 N C N 337 N O N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N N N 348 S C N 349 N C N 350 N O N 351 N C Y 352 N C Y 353 N C Y 354 N C Y 355 N N Y 356 N C Y 357 N C Y 358 N C Y 359 N C Y 360 N C N 361 N O N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N N N 375 S C N 376 N C N 377 N O N 378 N C Y 379 N C Y 380 N C Y 381 N C Y 382 N C Y 383 N C Y 384 N C N 385 N O N 386 N O N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N N N 399 S C N 400 N C N 401 N O N 402 N C N 403 N C N 404 N C N 405 N O N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing Y 153 N sing Y 154 N doub Y 155 N doub N 156 N sing Y 157 N sing N 158 N sing Y 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N doub N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N doub N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N doub N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N doub N 268 N sing N 269 N sing N 270 N sing N 271 N sing Y 272 N doub Y 273 N sing Y 274 N sing N 275 N sing Y 276 N doub N 277 N sing Y 278 N doub N 279 N sing Y 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N doub N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N doub N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing Y 341 N doub Y 342 N sing Y 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N sing Y 350 N doub N 351 N sing Y 352 N doub N 353 N sing Y 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing Y 369 N doub Y 370 N sing Y 371 N sing N 372 N sing Y 373 N doub N 374 N sing Y 375 N doub N 376 N sing Y 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N doub N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 367 1215 1226 10.1016/j.jmb.2007.01.028 17306299 Insight into Host Cell Carbohydrate-recognition by Human and Porcine Rotavirus from Crystal Structures of the Virion Spike Associated Carbohydrate-binding Domain (VP8*) 2007 DK Acta Crystallogr.,Sect.F 1744-3091 61 989 993 10.1107/S1744309105032999 16511215 Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of the VP8* carbohydrate-binding protein of the human rotavirus strain Wa 2005 10.2210/pdb2dwr/pdb pdb_00002dwr 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 mirrors CCD 2004-07-16 MAR CCD 165 mm silicon 111 SINGLE WAVELENGTH M x-ray 1 0.9794 1.0 BM30A ESRF 0.9794 SYNCHROTRON ESRF BEAMLINE BM30A 18396.184 Outer capsid protein VP8* domain 1 man polymer 92.094 GLYCEROL 2 syn non-polymer 60.095 ISOPROPYL ALCOHOL 2 syn non-polymer 18.015 water 93 nat water spike protein no no MLDGPYQPTTFTPPNDYWILINSNTNGVVYESTNNSDFWTAVVAIEPHVNPVDRQYTIFGESKQFNVSNDSNKWKFLEMF RSSSQNEFYNRRTLTSDTRLVGILKYGGRVWTFHGETPRATTDSSSTANLNNISITIHSEFYIIPRSQESKCNEYINNGL MLDGPYQPTTFTPPNDYWILINSNTNGVVYESTNNSDFWTAVVAIEPHVNPVDRQYTIFGESKQFNVSNDSNKWKFLEMF RSSSQNEFYNRRTLTSDTRLVGILKYGGRVWTFHGETPRATTDSSSTANLNNISITIHSEFYIIPRSQESKCNEYINNGL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Rotavirus Rotavirus A strain Wa Escherichia Escherichia coli sample 10941 Human rotavirus A 469008 Escherichia coli BL21(DE3) Bl21 DE3 Plasmid pGEX-VP8(64-223) 1 3.07 59.97 VAPOR DIFFUSION, HANGING DROP 5.6 25% PEG 4000, 20% 2-propanol, 0.1M sodium citrate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 295K 295 database_2 struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Non-polymer description Version format compliance Database references Derived calculations Data collection Refinement description 1 0 2007-04-03 1 1 2008-04-01 1 2 2011-07-13 1 3 2021-11-10 1 4 2024-04-03 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id PDBJ Y PDBJ 2006-08-16 REL REL GOL GLYCEROL IPA ISOPROPYL ALCOHOL HOH water Homology model based on the structure of porcine CRW-8 VP8* that we have solved. Other experimental model GOL 4000 2 GOL GOL 4000 A GOL 4000 2 GOL GOL 4001 A IOH 5000 3 IPA IPA 5000 A IOH 5000 3 IPA IPA 5001 A HOH 1 4 HOH HOH 5002 A HOH 2 4 HOH HOH 5003 A HOH 3 4 HOH HOH 5004 A HOH 4 4 HOH HOH 5005 A HOH 5 4 HOH HOH 5006 A HOH 6 4 HOH HOH 5007 A HOH 7 4 HOH HOH 5008 A HOH 8 4 HOH HOH 5009 A HOH 9 4 HOH HOH 5010 A HOH 10 4 HOH HOH 5011 A HOH 11 4 HOH HOH 5012 A HOH 12 4 HOH HOH 5013 A HOH 13 4 HOH HOH 5014 A HOH 14 4 HOH HOH 5015 A HOH 15 4 HOH HOH 5016 A HOH 16 4 HOH HOH 5017 A HOH 17 4 HOH HOH 5018 A HOH 18 4 HOH HOH 5019 A HOH 19 4 HOH HOH 5020 A HOH 20 4 HOH HOH 5021 A HOH 21 4 HOH HOH 5022 A HOH 22 4 HOH HOH 5023 A HOH 23 4 HOH HOH 5024 A HOH 24 4 HOH HOH 5025 A HOH 25 4 HOH HOH 5026 A HOH 26 4 HOH HOH 5027 A HOH 27 4 HOH HOH 5028 A HOH 28 4 HOH HOH 5029 A HOH 29 4 HOH HOH 5030 A HOH 30 4 HOH HOH 5031 A HOH 31 4 HOH HOH 5032 A HOH 32 4 HOH HOH 5033 A HOH 33 4 HOH HOH 5034 A HOH 34 4 HOH HOH 5035 A HOH 35 4 HOH HOH 5036 A HOH 36 4 HOH HOH 5037 A HOH 37 4 HOH HOH 5038 A HOH 38 4 HOH HOH 5039 A HOH 39 4 HOH HOH 5040 A HOH 40 4 HOH HOH 5041 A HOH 41 4 HOH HOH 5042 A HOH 42 4 HOH HOH 5043 A HOH 43 4 HOH HOH 5044 A HOH 44 4 HOH HOH 5045 A HOH 45 4 HOH HOH 5046 A HOH 46 4 HOH HOH 5047 A HOH 47 4 HOH HOH 5048 A HOH 48 4 HOH HOH 5049 A HOH 49 4 HOH HOH 5050 A HOH 50 4 HOH HOH 5051 A HOH 51 4 HOH HOH 5052 A HOH 52 4 HOH HOH 5053 A HOH 53 4 HOH HOH 5054 A HOH 54 4 HOH HOH 5055 A HOH 55 4 HOH HOH 5056 A HOH 56 4 HOH HOH 5057 A HOH 57 4 HOH HOH 5058 A HOH 58 4 HOH HOH 5059 A HOH 59 4 HOH HOH 5060 A HOH 60 4 HOH HOH 5061 A HOH 61 4 HOH HOH 5062 A HOH 62 4 HOH HOH 5063 A HOH 63 4 HOH HOH 5064 A HOH 64 4 HOH HOH 5065 A HOH 65 4 HOH HOH 5066 A HOH 66 4 HOH HOH 5067 A HOH 67 4 HOH HOH 5068 A HOH 68 4 HOH HOH 5069 A HOH 69 4 HOH HOH 5070 A HOH 70 4 HOH HOH 5071 A HOH 71 4 HOH HOH 5072 A HOH 72 4 HOH HOH 5073 A HOH 73 4 HOH HOH 5074 A HOH 74 4 HOH HOH 5075 A HOH 75 4 HOH HOH 5076 A HOH 76 4 HOH HOH 5077 A HOH 77 4 HOH HOH 5078 A HOH 78 4 HOH HOH 5079 A HOH 79 4 HOH HOH 5080 A HOH 80 4 HOH HOH 5081 A HOH 81 4 HOH HOH 5082 A HOH 82 4 HOH HOH 5083 A HOH 83 4 HOH HOH 5084 A HOH 84 4 HOH HOH 5085 A HOH 85 4 HOH HOH 5086 A HOH 86 4 HOH HOH 5087 A HOH 87 4 HOH HOH 5088 A HOH 88 4 HOH HOH 5089 A HOH 89 4 HOH HOH 5090 A HOH 90 4 HOH HOH 5091 A HOH 91 4 HOH HOH 5092 A HOH 92 4 HOH HOH 5093 A HOH 93 4 HOH HOH 5094 A MET 64 n 1 MET 64 A LEU 65 n 2 LEU 65 A ASP 66 n 3 ASP 66 A GLY 67 n 4 GLY 67 A PRO 68 n 5 PRO 68 A TYR 69 n 6 TYR 69 A GLN 70 n 7 GLN 70 A PRO 71 n 8 PRO 71 A THR 72 n 9 THR 72 A THR 73 n 10 THR 73 A PHE 74 n 11 PHE 74 A THR 75 n 12 THR 75 A PRO 76 n 13 PRO 76 A PRO 77 n 14 PRO 77 A ASN 78 n 15 ASN 78 A ASP 79 n 16 ASP 79 A TYR 80 n 17 TYR 80 A TRP 81 n 18 TRP 81 A ILE 82 n 19 ILE 82 A LEU 83 n 20 LEU 83 A ILE 84 n 21 ILE 84 A ASN 85 n 22 ASN 85 A SER 86 n 23 SER 86 A ASN 87 n 24 ASN 87 A THR 88 n 25 THR 88 A ASN 89 n 26 ASN 89 A GLY 90 n 27 GLY 90 A VAL 91 n 28 VAL 91 A VAL 92 n 29 VAL 92 A TYR 93 n 30 TYR 93 A GLU 94 n 31 GLU 94 A SER 95 n 32 SER 95 A THR 96 n 33 THR 96 A ASN 97 n 34 ASN 97 A ASN 98 n 35 ASN 98 A SER 99 n 36 SER 99 A ASP 100 n 37 ASP 100 A PHE 101 n 38 PHE 101 A TRP 102 n 39 TRP 102 A THR 103 n 40 THR 103 A ALA 104 n 41 ALA 104 A VAL 105 n 42 VAL 105 A VAL 106 n 43 VAL 106 A ALA 107 n 44 ALA 107 A ILE 108 n 45 ILE 108 A GLU 109 n 46 GLU 109 A PRO 110 n 47 PRO 110 A HIS 111 n 48 HIS 111 A VAL 112 n 49 VAL 112 A ASN 113 n 50 ASN 113 A PRO 114 n 51 PRO 114 A VAL 115 n 52 VAL 115 A ASP 116 n 53 ASP 116 A ARG 117 n 54 ARG 117 A GLN 118 n 55 GLN 118 A TYR 119 n 56 TYR 119 A THR 120 n 57 THR 120 A ILE 121 n 58 ILE 121 A PHE 122 n 59 PHE 122 A GLY 123 n 60 GLY 123 A GLU 124 n 61 GLU 124 A SER 125 n 62 SER 125 A LYS 126 n 63 LYS 126 A GLN 127 n 64 GLN 127 A PHE 128 n 65 PHE 128 A ASN 129 n 66 ASN 129 A VAL 130 n 67 VAL 130 A SER 131 n 68 SER 131 A ASN 132 n 69 ASN 132 A ASP 133 n 70 ASP 133 A SER 134 n 71 SER 134 A ASN 135 n 72 ASN 135 A LYS 136 n 73 LYS 136 A TRP 137 n 74 TRP 137 A LYS 138 n 75 LYS 138 A PHE 139 n 76 PHE 139 A LEU 140 n 77 LEU 140 A GLU 141 n 78 GLU 141 A MET 142 n 79 MET 142 A PHE 143 n 80 PHE 143 A ARG 144 n 81 ARG 144 A SER 145 n 82 SER 145 A SER 146 n 83 SER 146 A SER 147 n 84 SER 147 A GLN 148 n 85 GLN 148 A ASN 149 n 86 ASN 149 A GLU 150 n 87 GLU 150 A PHE 151 n 88 PHE 151 A TYR 152 n 89 TYR 152 A ASN 153 n 90 ASN 153 A ARG 154 n 91 ARG 154 A ARG 155 n 92 ARG 155 A THR 156 n 93 THR 156 A LEU 157 n 94 LEU 157 A THR 158 n 95 THR 158 A SER 159 n 96 SER 159 A ASP 160 n 97 ASP 160 A THR 161 n 98 THR 161 A ARG 162 n 99 ARG 162 A LEU 163 n 100 LEU 163 A VAL 164 n 101 VAL 164 A GLY 165 n 102 GLY 165 A ILE 166 n 103 ILE 166 A LEU 167 n 104 LEU 167 A LYS 168 n 105 LYS 168 A TYR 169 n 106 TYR 169 A GLY 170 n 107 GLY 170 A GLY 171 n 108 GLY 171 A ARG 172 n 109 ARG 172 A VAL 173 n 110 VAL 173 A TRP 174 n 111 TRP 174 A THR 175 n 112 THR 175 A PHE 176 n 113 PHE 176 A HIS 177 n 114 HIS 177 A GLY 178 n 115 GLY 178 A GLU 179 n 116 GLU 179 A THR 180 n 117 THR 180 A PRO 181 n 118 PRO 181 A ARG 182 n 119 ARG 182 A ALA 183 n 120 ALA 183 A THR 184 n 121 THR 184 A THR 185 n 122 THR 185 A ASP 186 n 123 ASP 186 A SER 187 n 124 SER 187 A SER 188 n 125 SER 188 A SER 189 n 126 SER 189 A THR 190 n 127 THR 190 A ALA 191 n 128 ALA 191 A ASN 192 n 129 ASN 192 A LEU 193 n 130 LEU 193 A ASN 194 n 131 ASN 194 A ASN 195 n 132 ASN 195 A ILE 196 n 133 ILE 196 A SER 197 n 134 SER 197 A ILE 198 n 135 ILE 198 A THR 199 n 136 THR 199 A ILE 200 n 137 ILE 200 A HIS 201 n 138 HIS 201 A SER 202 n 139 SER 202 A GLU 203 n 140 GLU 203 A PHE 204 n 141 PHE 204 A TYR 205 n 142 TYR 205 A ILE 206 n 143 ILE 206 A ILE 207 n 144 ILE 207 A PRO 208 n 145 PRO 208 A ARG 209 n 146 ARG 209 A SER 210 n 147 SER 210 A GLN 211 n 148 GLN 211 A GLU 212 n 149 GLU 212 A SER 213 n 150 SER 213 A LYS 214 n 151 LYS 214 A CYS 215 n 152 CYS 215 A ASN 216 n 153 ASN 216 A GLU 217 n 154 GLU 217 A TYR 218 n 155 TYR 218 A ILE 219 n 156 ILE 219 A ASN 220 n 157 ASN 220 A ASN 221 n 158 ASN 221 A GLY 222 n 159 GLY 222 A LEU 223 n 160 LEU 223 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N TYR 69 A N TYR 6 A O PHE 204 A O PHE 141 A O ILE 207 A O ILE 144 A N TRP 81 A N TRP 18 A N ILE 84 A N ILE 21 A O VAL 164 A O VAL 101 A N LEU 167 A N LEU 104 A O TRP 174 A O TRP 111 A O GLY 178 A O GLY 115 A N THR 158 A N THR 95 A O ARG 155 A O ARG 92 A N GLU 141 A N GLU 78 A O MET 142 A O MET 79 A N ALA 104 A N ALA 41 A O VAL 105 A O VAL 42 A N VAL 92 A N VAL 29 A N GLU 94 A N GLU 31 A O THR 199 A O THR 136 A O ILE 198 A O ILE 135 A N PHE 74 A N PHE 11 A N TYR 69 A N TYR 6 A O PHE 204 A O PHE 141 A O ILE 207 A O ILE 144 A N TRP 81 A N TRP 18 A N ILE 84 A N ILE 21 A O VAL 164 A O VAL 101 A N LEU 167 A N LEU 104 A O TRP 174 A O TRP 111 A N HIS 177 A N HIS 114 A O THR 184 A O THR 121 A N TYR 119 A N TYR 56 A O LYS 126 A O LYS 63 1 A HOH 5069 F HOH 1 A ASN 89 -105.48 44.35 1 A ASN 98 58.17 17.66 1 A SER 99 -129.47 -62.14 1 A PRO 114 -37.63 127.27 1 A SER 210 -36.23 -29.90 31.888 1.36 0.68 0.00 1.36 0.00 -2.04 0.952 0.910 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.23508 0.17718 0.17973 2.50 64.55 355 8114 7491 4.5 96.54 7.301 0.163 RANDOM 1 THROUGHOUT 2.0 MOLECULAR REPLACEMENT 0.402 0.263 0.80 0.80 1.40 Homology model based on the structure of porcine CRW-8 VP8* that we have solved. MAXIMUM LIKELIHOOD MASK 2.50 64.55 93 1413 20 0 1300 0.008 0.022 1356 1.106 1.925 1846 6.653 5.000 161 33.678 24.366 71 16.865 15.000 209 12.765 15.000 8 0.082 0.200 200 0.003 0.020 1057 0.197 0.200 583 0.307 0.200 909 0.115 0.200 102 0.206 0.200 40 0.169 0.200 10 0.528 1.500 829 0.949 2.000 1322 1.193 3.000 608 1.973 4.500 523 0.237 0.271 2.565 23 533 20 97.20 2.5 64.6 2DWR 8135 1 refinement REFMAC 5.2.0019 data collection XNEMO data collection FIP BM30A data reduction MOSFLM data scaling CCP4 (SCALA) phasing AMoRE Crystal structure of the human Wa rotavirus VP8* carbohydrate-recognising domain 1 N N 2 N N 2 N N 3 N N 3 N N 4 N N A GLN 211 A GLN 148 HELX_P A GLY 222 A GLY 159 1 1 12 VIRAL PROTEIN beta-sandwich, VIRAL PROTEIN A GLY 67 A GLY 4 1 A PRO 68 A PRO 5 7.35 A THR 180 A THR 117 1 A PRO 181 A PRO 118 2.73 Q86202_9REOV UNP 1 64 Q86202 MLDGPYQPTTFTPPNDYWILINSNTNGVVYESTNNSDFWTAVVAIEPHVNPVDRQYTIFGESKQFNVSNDSNKWKFLEMF RSSSQNEFYNRRTLTSDTRFVGILKYGGRVWTFHGETPRATTDSSSTANLNNISITIHSEFYIIPRSQESKCNEYINNGL 64 223 2DWR 64 223 Q86202 A 1 1 160 1 PHE engineered mutation LEU 163 2DWR A Q86202 UNP 163 100 11 6 2 anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ASP 66 A ASP 3 A TYR 69 A TYR 6 A PHE 204 A PHE 141 A PRO 208 A PRO 145 A TYR 80 A TYR 17 A ASN 85 A ASN 22 A LEU 163 A LEU 100 A TYR 169 A TYR 106 A ARG 172 A ARG 109 A GLU 179 A GLU 116 A TYR 152 A TYR 89 A SER 159 A SER 96 A TRP 137 A TRP 74 A ARG 144 A ARG 81 A TRP 102 A TRP 39 A ILE 108 A ILE 45 A VAL 91 A VAL 28 A THR 96 A THR 33 A SER 197 A SER 134 A ILE 200 A ILE 137 A THR 72 A THR 9 A PHE 74 A PHE 11 A ASP 66 A ASP 3 A TYR 69 A TYR 6 A PHE 204 A PHE 141 A PRO 208 A PRO 145 A TYR 80 A TYR 17 A ASN 85 A ASN 22 A LEU 163 A LEU 100 A TYR 169 A TYR 106 A ARG 172 A ARG 109 A GLU 179 A GLU 116 A THR 184 A THR 121 A SER 189 A SER 126 A VAL 112 A VAL 49 A ILE 121 A ILE 58 A GLU 124 A GLU 61 A ASN 132 A ASN 69 BINDING SITE FOR RESIDUE GOL A 4000 A GOL 4000 Software 5 BINDING SITE FOR RESIDUE GOL A 4001 A GOL 4001 Software 9 BINDING SITE FOR RESIDUE IPA A 5000 A IPA 5000 Software 5 BINDING SITE FOR RESIDUE IPA A 5001 A IPA 5001 Software 5 A LEU 167 A LEU 104 5 1_555 A TRP 174 A TRP 111 5 1_555 A THR 185 A THR 122 5 1_555 A ARG 209 A ARG 146 5 1_555 A GLU 212 A GLU 149 5 1_555 A GLY 90 A GLY 27 9 3_565 A VAL 91 A VAL 28 9 3_565 A TYR 119 A TYR 56 9 3_565 A THR 120 A THR 57 9 3_565 A ARG 155 A ARG 92 9 1_555 A THR 156 A THR 93 9 1_555 A HIS 177 A HIS 114 9 1_555 A IPA 5001 E IPA 9 1_555 A HOH 5054 F HOH 9 1_555 A ARG 117 A ARG 54 5 1_555 A GLN 118 A GLN 55 5 1_555 A HIS 177 A HIS 114 5 2_664 A GLY 178 A GLY 115 5 2_664 A HOH 5091 F HOH 5 2_664 A ASN 153 A ASN 90 5 1_555 A ARG 154 A ARG 91 5 1_555 A THR 156 A THR 93 5 1_555 A HIS 201 A HIS 138 5 3_565 A GOL 4001 C GOL 5 1_555 154 P 32 2 1