1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Tochio, N. Tomizawa, T. Abe, H. Saito, K. Li, H. Sato, M. Koshiba, S. Kobayashi, N. Kigawa, T. Yokoyama, S. RIKEN Structural Genomics/Proteomics Initiative (RSGI) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer To be Published 0353 Solution structure of the C2H2 type zinc finger (region 859-889) of human Zinc finger protein 268 10.2210/pdb2emv/pdb pdb_00002emv 4603.958 Zinc finger protein 268 zf-C2H2 domain 1 man polymer 65.409 ZINC ION 1 syn non-polymer Zinc finger protein HZF3 no no GSSGSSGTREKPYECSECGKAFIRNSQLIVHQRTHSGESGPSSG GSSGSSGTREKPYECSECGKAFIRNSQLIVHQRTHSGESGPSSG A hso003011774.19 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo sample cell-free protein synthesis ZNF268 9606 Homo sapiens plasmid P061225-03 RIKEN Structural Genomics/Proteomics Initiative RSGI NPPSFA, National Project on Protein Structural and Functional Analyses database_2 pdbx_nmr_software pdbx_nmr_spectrometer pdbx_struct_assembly pdbx_struct_oper_list struct_ref_seq_dif repository Initial release Version format compliance Data collection Database references Derived calculations 1 0 2007-10-02 1 1 2011-07-13 1 2 2022-03-09 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name _pdbx_nmr_spectrometer.model _struct_ref_seq_dif.details Y PDBJ Y PDBJ 2007-03-28 REL REL ZN ZINC ION structures with the least restraint violations, target function 100 20 3D_13C-separated_NOESY 3D_15N-separated_NOESY 120mM 7.0 ambient 296 K torsion angle dynamics 1 lowest energy about 1.0mM sample U-15N,13C; 20mM d-Tris-HCl; 100mM NaCl; 0.05MM ZnCl2; 1mM IDA; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O 90% H2O/10% D2O Bruker collection XwinNMR 3.5 Delaglio, F. processing NMRPipe 20030801 Johnson, B.A. data analysis NMRView 5.0.4 Kobayashi, N. data analysis KUJIRA 0.9820 Guntert, P. structure solution CYANA 2.0.17 Guntert, P. refinement CYANA 2.0.17 800 Bruker AVANCE ZN 201 2 ZN ZN 201 A GLY 1 n 1 GLY 1 A SER 2 n 2 SER 2 A SER 3 n 3 SER 3 A GLY 4 n 4 GLY 4 A SER 5 n 5 SER 5 A SER 6 n 6 SER 6 A GLY 7 n 7 GLY 7 A THR 8 n 8 THR 8 A ARG 9 n 9 ARG 9 A GLU 10 n 10 GLU 10 A LYS 11 n 11 LYS 11 A PRO 12 n 12 PRO 12 A TYR 13 n 13 TYR 13 A GLU 14 n 14 GLU 14 A CYS 15 n 15 CYS 15 A SER 16 n 16 SER 16 A GLU 17 n 17 GLU 17 A CYS 18 n 18 CYS 18 A GLY 19 n 19 GLY 19 A LYS 20 n 20 LYS 20 A ALA 21 n 21 ALA 21 A PHE 22 n 22 PHE 22 A ILE 23 n 23 ILE 23 A ARG 24 n 24 ARG 24 A ASN 25 n 25 ASN 25 A SER 26 n 26 SER 26 A GLN 27 n 27 GLN 27 A LEU 28 n 28 LEU 28 A ILE 29 n 29 ILE 29 A VAL 30 n 30 VAL 30 A HIS 31 n 31 HIS 31 A GLN 32 n 32 GLN 32 A ARG 33 n 33 ARG 33 A THR 34 n 34 THR 34 A HIS 35 n 35 HIS 35 A SER 36 n 36 SER 36 A GLY 37 n 37 GLY 37 A GLU 38 n 38 GLU 38 A SER 39 n 39 SER 39 A GLY 40 n 40 GLY 40 A PRO 41 n 41 PRO 41 A SER 42 n 42 SER 42 A SER 43 n 43 SER 43 A GLY 44 n 44 GLY 44 A author_defined_assembly 1 monomeric A CYS 15 A SG CYS 15 1_555 A ZN 201 B ZN ZN 1_555 A CYS 18 A SG CYS 18 1_555 113.4 A CYS 15 A SG CYS 15 1_555 A ZN 201 B ZN ZN 1_555 A HIS 31 A NE2 HIS 31 1_555 112.8 A CYS 18 A SG CYS 18 1_555 A ZN 201 B ZN ZN 1_555 A HIS 31 A NE2 HIS 31 1_555 99.6 A CYS 15 A SG CYS 15 1_555 A ZN 201 B ZN ZN 1_555 A HIS 35 A NE2 HIS 35 1_555 116.4 A CYS 18 A SG CYS 18 1_555 A ZN 201 B ZN ZN 1_555 A HIS 35 A NE2 HIS 35 1_555 111.7 A HIS 31 A NE2 HIS 31 1_555 A ZN 201 B ZN ZN 1_555 A HIS 35 A NE2 HIS 35 1_555 101.0 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N TYR 13 A N TYR 13 A O PHE 22 A O PHE 22 1 A SER 2 -39.10 154.22 1 A SER 5 39.85 45.33 1 A LYS 20 -49.47 -179.30 1 A SER 36 -37.87 135.92 1 A SER 42 71.45 40.80 2 A GLU 10 -84.59 32.34 2 A LYS 20 -50.40 -178.19 3 A GLU 10 -85.49 43.38 3 A LYS 20 -48.09 177.33 3 A SER 42 -35.83 132.32 3 A SER 43 -36.02 148.89 4 A LYS 11 -34.45 142.73 4 A LYS 20 -50.49 177.03 5 A LYS 20 -48.57 178.91 5 A SER 39 -82.12 43.74 5 A SER 42 34.35 43.46 6 A SER 3 -41.48 151.07 6 A LYS 20 -50.26 -177.60 7 A LYS 11 -34.42 129.97 7 A LYS 20 -49.46 -179.48 8 A LYS 20 -52.62 178.88 8 A GLU 38 -85.46 34.51 8 A PRO 41 -69.77 91.84 9 A SER 5 -174.84 134.40 9 A SER 6 -96.12 -62.14 9 A LYS 20 -50.88 179.19 9 A SER 39 38.19 46.94 9 A PRO 41 -69.76 2.79 9 A SER 42 -34.41 99.14 10 A ARG 9 -56.64 108.30 10 A LYS 20 -42.72 164.37 10 A SER 43 -172.15 126.55 11 A SER 6 -38.99 143.74 11 A LYS 11 -34.05 132.64 11 A GLU 17 -130.22 -44.08 11 A LYS 20 -53.21 -179.81 12 A ARG 9 -109.01 78.53 12 A LYS 20 -48.79 179.18 13 A SER 5 -92.73 42.29 13 A SER 6 -121.30 -54.37 13 A THR 8 -169.61 117.70 13 A LYS 20 -50.28 -177.63 13 A SER 36 -81.12 44.58 13 A SER 43 -174.61 114.51 14 A SER 5 -125.92 -56.73 14 A ARG 9 -97.60 47.55 14 A LYS 20 -52.80 179.04 14 A SER 26 -39.13 -35.25 14 A SER 42 -49.03 103.77 15 A SER 2 -96.14 42.44 15 A ARG 9 -37.30 112.83 15 A LYS 20 -49.29 179.99 15 A PRO 41 -69.79 94.78 16 A GLU 10 -130.79 -41.44 16 A LYS 20 -54.48 -174.76 16 A SER 26 -39.51 -37.66 16 A SER 42 -61.17 86.93 17 A SER 5 -91.00 55.97 17 A GLU 10 -82.83 45.84 17 A LYS 20 -57.29 -174.69 17 A PRO 41 -69.78 2.72 17 A SER 42 -34.50 132.12 18 A THR 8 -39.67 128.84 18 A LYS 20 -48.97 169.18 18 A SER 36 -38.77 119.29 18 A SER 39 -104.44 41.71 19 A SER 2 -133.39 -46.69 19 A SER 3 39.83 42.55 19 A LYS 20 -50.74 -176.44 19 A PRO 41 -69.81 0.88 20 A SER 5 -170.45 142.66 20 A LYS 20 -49.58 177.52 20 A SER 26 -39.39 -39.95 20 A SER 39 -69.22 96.37 20 A PRO 41 -69.75 88.08 Solution structure of the C2H2 type zinc finger (region 859-889) of human Zinc finger protein 268 1 N N 2 N N A ARG 24 A ARG 24 HELX_P A SER 36 A SER 36 1 1 13 metalc 2.370 A CYS 15 A SG CYS 15 1_555 A ZN 201 B ZN ZN 1_555 metalc 2.348 A CYS 18 A SG CYS 18 1_555 A ZN 201 B ZN ZN 1_555 metalc 2.367 A HIS 31 A NE2 HIS 31 1_555 A ZN 201 B ZN ZN 1_555 metalc 2.327 A HIS 35 A NE2 HIS 35 1_555 A ZN 201 B ZN ZN 1_555 TRANSCRIPTION zf-C2H2, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSCRIPTION ZN268_HUMAN UNP 1 859 Q14587 TREKPYECSECGKAFIRNSQLIVHQRTHSGE 859 889 2EMV 8 38 Q14587 A 1 8 38 1 expression tag GLY 1 2EMV A Q14587 UNP 1 1 expression tag SER 2 2EMV A Q14587 UNP 2 1 expression tag SER 3 2EMV A Q14587 UNP 3 1 expression tag GLY 4 2EMV A Q14587 UNP 4 1 expression tag SER 5 2EMV A Q14587 UNP 5 1 expression tag SER 6 2EMV A Q14587 UNP 6 1 expression tag GLY 7 2EMV A Q14587 UNP 7 1 expression tag SER 39 2EMV A Q14587 UNP 39 1 expression tag GLY 40 2EMV A Q14587 UNP 40 1 expression tag PRO 41 2EMV A Q14587 UNP 41 1 expression tag SER 42 2EMV A Q14587 UNP 42 1 expression tag SER 43 2EMV A Q14587 UNP 43 1 expression tag GLY 44 2EMV A Q14587 UNP 44 2 anti-parallel A TYR 13 A TYR 13 A GLU 14 A GLU 14 A ALA 21 A ALA 21 A PHE 22 A PHE 22