0.022337
0.000000
0.003306
0.000000
0.016830
0.000000
0.000000
0.000000
0.015111
0.00000
0.00000
0.00000
Young, M.A.
Shah, N.P.
Chao, L.H.
Zarrinkar, P.
Sawyers, P.
Kuriyan, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
98.42
90.00
44.768
59.417
66.896
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
C23 H28 N8 O S
464.586
CYCLOPROPANECARBOXYLIC ACID {4-[4-(4-METHYL-PIPERAZIN-1-YL)-6-(5-METHYL-2H-PYRAZOL-3-YLAMINO)-PYRIMIDIN-2-YLSULFANYL]-PHENYL}-AMIDE
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
N
N
392
N
C
N
393
N
C
N
394
N
N
N
395
N
C
N
396
N
C
N
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
N
Y
402
N
C
Y
403
N
N
N
404
N
N
Y
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
N
Y
409
N
N
N
410
N
C
N
411
N
S
Y
412
N
C
Y
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
Y
417
N
C
N
418
N
N
N
419
N
C
N
420
N
O
N
421
N
C
N
422
N
C
N
423
N
C
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
Y
395
N
sing
Y
396
N
doub
Y
397
N
doub
N
398
N
sing
Y
399
N
sing
N
400
N
sing
Y
401
N
doub
Y
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
Y
406
N
doub
Y
407
N
sing
Y
408
N
sing
N
409
N
sing
Y
410
N
doub
N
411
N
sing
Y
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
Y
418
N
sing
Y
419
N
doub
Y
420
N
doub
N
421
N
sing
Y
422
N
sing
N
423
N
sing
Y
424
N
doub
N
425
N
sing
Y
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
doub
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
US
Cancer Res.
CNREA8
0400
0008-5472
66
1007
1014
10.1158/0008-5472.CAN-05-2788
16424036
Structure of the kinase domain of an imatinib-resistant Abl mutant in complex with the Aurora kinase inhibitor VX-680.
2006
10.2210/pdb2f4j/pdb
pdb_00002f4j
100
1
CCD
2004-10-26
ADSC QUANTUM 210
Double crystal Si(111)
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
8.2.1
ALS
1.0
SYNCHROTRON
ALS BEAMLINE 8.2.1
33171.938
Proto-oncogene tyrosine-protein kinase ABL1
2.7.1.112
Kinase domain, residues 227-513
H396P
1
man
polymer
464.586
CYCLOPROPANECARBOXYLIC ACID {4-[4-(4-METHYL-PIPERAZIN-1-YL)-6-(5-METHYL-2H-PYRAZOL-3-YLAMINO)-PYRIMIDIN-2-YLSULFANYL]-PHENYL}-AMIDE
1
syn
non-polymer
18.015
water
211
nat
water
p150, c- ABL
no
no
GMSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT
REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR
LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPE
KVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKQ
GMSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT
REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR
LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPE
KVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKQ
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
ABL1, ABL, JTK7
9606
Homo sapiens
562
Escherichia coli
BL21(DE3)-star
PLASMID
pET28a-TEV
1
2.65
53.67
VAPOR DIFFUSION, SITTING DROP
3.5
25% w/v PEG1500, 0.1M citric acid, pH 3.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
293
software
database_2
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Refinement description
Database references
Derived calculations
Data collection
Refinement description
1
0
2006-01-24
1
1
2008-05-01
1
2
2011-07-13
1
3
2017-10-18
1
4
2021-10-20
1
5
2023-08-23
_software.classification
_software.contact_author
_software.contact_author_email
_software.date
_software.language
_software.location
_software.name
_software.type
_software.version
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2005-11-23
REL
REL
VX6
CYCLOPROPANECARBOXYLIC ACID {4-[4-(4-METHYL-PIPERAZIN-1-YL)-6-(5-METHYL-2H-PYRAZOL-3-YLAMINO)-PYRIMIDIN-2-YLSULFANYL]-PHENYL}-AMIDE
HOH
water
1M52
PDB ENTRY 1M52
PDB
experimental model
VX6
301
2
VX6
VX6
514
A
HOH
1
3
HOH
HOH
1
A
HOH
2
3
HOH
HOH
2
A
HOH
3
3
HOH
HOH
3
A
HOH
4
3
HOH
HOH
4
A
HOH
5
3
HOH
HOH
5
A
HOH
6
3
HOH
HOH
6
A
HOH
7
3
HOH
HOH
7
A
HOH
8
3
HOH
HOH
8
A
HOH
9
3
HOH
HOH
9
A
HOH
10
3
HOH
HOH
10
A
HOH
11
3
HOH
HOH
11
A
HOH
12
3
HOH
HOH
12
A
HOH
13
3
HOH
HOH
13
A
HOH
14
3
HOH
HOH
14
A
HOH
15
3
HOH
HOH
15
A
HOH
16
3
HOH
HOH
16
A
HOH
17
3
HOH
HOH
17
A
HOH
18
3
HOH
HOH
18
A
HOH
19
3
HOH
HOH
19
A
HOH
20
3
HOH
HOH
20
A
HOH
21
3
HOH
HOH
21
A
HOH
22
3
HOH
HOH
22
A
HOH
23
3
HOH
HOH
23
A
HOH
24
3
HOH
HOH
24
A
HOH
25
3
HOH
HOH
25
A
HOH
26
3
HOH
HOH
26
A
HOH
27
3
HOH
HOH
27
A
HOH
28
3
HOH
HOH
28
A
HOH
29
3
HOH
HOH
29
A
HOH
30
3
HOH
HOH
30
A
HOH
31
3
HOH
HOH
31
A
HOH
32
3
HOH
HOH
32
A
HOH
33
3
HOH
HOH
33
A
HOH
34
3
HOH
HOH
34
A
HOH
35
3
HOH
HOH
35
A
HOH
36
3
HOH
HOH
36
A
HOH
37
3
HOH
HOH
37
A
HOH
38
3
HOH
HOH
38
A
HOH
39
3
HOH
HOH
39
A
HOH
40
3
HOH
HOH
40
A
HOH
41
3
HOH
HOH
41
A
HOH
42
3
HOH
HOH
42
A
HOH
43
3
HOH
HOH
43
A
HOH
44
3
HOH
HOH
44
A
HOH
45
3
HOH
HOH
45
A
HOH
46
3
HOH
HOH
46
A
HOH
47
3
HOH
HOH
47
A
HOH
48
3
HOH
HOH
48
A
HOH
49
3
HOH
HOH
49
A
HOH
50
3
HOH
HOH
50
A
HOH
51
3
HOH
HOH
51
A
HOH
52
3
HOH
HOH
52
A
HOH
53
3
HOH
HOH
53
A
HOH
54
3
HOH
HOH
54
A
HOH
55
3
HOH
HOH
55
A
HOH
56
3
HOH
HOH
56
A
HOH
57
3
HOH
HOH
57
A
HOH
58
3
HOH
HOH
58
A
HOH
59
3
HOH
HOH
59
A
HOH
60
3
HOH
HOH
60
A
HOH
61
3
HOH
HOH
61
A
HOH
62
3
HOH
HOH
62
A
HOH
63
3
HOH
HOH
63
A
HOH
64
3
HOH
HOH
64
A
HOH
65
3
HOH
HOH
65
A
HOH
66
3
HOH
HOH
66
A
HOH
67
3
HOH
HOH
67
A
HOH
68
3
HOH
HOH
68
A
HOH
69
3
HOH
HOH
69
A
HOH
70
3
HOH
HOH
70
A
HOH
71
3
HOH
HOH
71
A
HOH
72
3
HOH
HOH
72
A
HOH
73
3
HOH
HOH
73
A
HOH
74
3
HOH
HOH
74
A
HOH
75
3
HOH
HOH
75
A
HOH
76
3
HOH
HOH
76
A
HOH
77
3
HOH
HOH
77
A
HOH
78
3
HOH
HOH
78
A
HOH
79
3
HOH
HOH
79
A
HOH
80
3
HOH
HOH
80
A
HOH
81
3
HOH
HOH
81
A
HOH
82
3
HOH
HOH
82
A
HOH
83
3
HOH
HOH
83
A
HOH
84
3
HOH
HOH
84
A
HOH
85
3
HOH
HOH
85
A
HOH
86
3
HOH
HOH
86
A
HOH
87
3
HOH
HOH
87
A
HOH
88
3
HOH
HOH
88
A
HOH
89
3
HOH
HOH
89
A
HOH
90
3
HOH
HOH
90
A
HOH
91
3
HOH
HOH
91
A
HOH
92
3
HOH
HOH
92
A
HOH
93
3
HOH
HOH
93
A
HOH
94
3
HOH
HOH
94
A
HOH
95
3
HOH
HOH
95
A
HOH
96
3
HOH
HOH
96
A
HOH
97
3
HOH
HOH
97
A
HOH
98
3
HOH
HOH
98
A
HOH
99
3
HOH
HOH
99
A
HOH
100
3
HOH
HOH
100
A
HOH
101
3
HOH
HOH
101
A
HOH
102
3
HOH
HOH
102
A
HOH
103
3
HOH
HOH
103
A
HOH
104
3
HOH
HOH
104
A
HOH
105
3
HOH
HOH
105
A
HOH
106
3
HOH
HOH
106
A
HOH
107
3
HOH
HOH
107
A
HOH
108
3
HOH
HOH
108
A
HOH
109
3
HOH
HOH
109
A
HOH
110
3
HOH
HOH
110
A
HOH
111
3
HOH
HOH
111
A
HOH
112
3
HOH
HOH
112
A
HOH
113
3
HOH
HOH
113
A
HOH
114
3
HOH
HOH
114
A
HOH
115
3
HOH
HOH
115
A
HOH
116
3
HOH
HOH
116
A
HOH
117
3
HOH
HOH
117
A
HOH
118
3
HOH
HOH
118
A
HOH
119
3
HOH
HOH
119
A
HOH
120
3
HOH
HOH
120
A
HOH
121
3
HOH
HOH
121
A
HOH
122
3
HOH
HOH
122
A
HOH
123
3
HOH
HOH
123
A
HOH
124
3
HOH
HOH
124
A
HOH
125
3
HOH
HOH
125
A
HOH
126
3
HOH
HOH
126
A
HOH
127
3
HOH
HOH
127
A
HOH
128
3
HOH
HOH
128
A
HOH
129
3
HOH
HOH
129
A
HOH
130
3
HOH
HOH
130
A
HOH
131
3
HOH
HOH
131
A
HOH
132
3
HOH
HOH
132
A
HOH
133
3
HOH
HOH
133
A
HOH
134
3
HOH
HOH
134
A
HOH
135
3
HOH
HOH
135
A
HOH
136
3
HOH
HOH
136
A
HOH
137
3
HOH
HOH
137
A
HOH
138
3
HOH
HOH
138
A
HOH
139
3
HOH
HOH
139
A
HOH
140
3
HOH
HOH
140
A
HOH
141
3
HOH
HOH
141
A
HOH
142
3
HOH
HOH
142
A
HOH
143
3
HOH
HOH
143
A
HOH
144
3
HOH
HOH
144
A
HOH
145
3
HOH
HOH
145
A
HOH
146
3
HOH
HOH
146
A
HOH
147
3
HOH
HOH
147
A
HOH
148
3
HOH
HOH
148
A
HOH
149
3
HOH
HOH
149
A
HOH
150
3
HOH
HOH
150
A
HOH
151
3
HOH
HOH
151
A
HOH
152
3
HOH
HOH
152
A
HOH
153
3
HOH
HOH
153
A
HOH
154
3
HOH
HOH
154
A
HOH
155
3
HOH
HOH
155
A
HOH
156
3
HOH
HOH
156
A
HOH
157
3
HOH
HOH
157
A
HOH
158
3
HOH
HOH
158
A
HOH
159
3
HOH
HOH
159
A
HOH
160
3
HOH
HOH
160
A
HOH
161
3
HOH
HOH
161
A
HOH
162
3
HOH
HOH
162
A
HOH
163
3
HOH
HOH
163
A
HOH
164
3
HOH
HOH
164
A
HOH
165
3
HOH
HOH
165
A
HOH
166
3
HOH
HOH
166
A
HOH
167
3
HOH
HOH
167
A
HOH
168
3
HOH
HOH
168
A
HOH
169
3
HOH
HOH
169
A
HOH
170
3
HOH
HOH
170
A
HOH
171
3
HOH
HOH
171
A
HOH
172
3
HOH
HOH
172
A
HOH
173
3
HOH
HOH
173
A
HOH
174
3
HOH
HOH
174
A
HOH
175
3
HOH
HOH
175
A
HOH
176
3
HOH
HOH
176
A
HOH
177
3
HOH
HOH
177
A
HOH
178
3
HOH
HOH
178
A
HOH
179
3
HOH
HOH
179
A
HOH
180
3
HOH
HOH
180
A
HOH
181
3
HOH
HOH
181
A
HOH
182
3
HOH
HOH
182
A
HOH
183
3
HOH
HOH
183
A
HOH
184
3
HOH
HOH
184
A
HOH
185
3
HOH
HOH
185
A
HOH
186
3
HOH
HOH
186
A
HOH
187
3
HOH
HOH
187
A
HOH
188
3
HOH
HOH
188
A
HOH
189
3
HOH
HOH
189
A
HOH
190
3
HOH
HOH
190
A
HOH
191
3
HOH
HOH
191
A
HOH
192
3
HOH
HOH
192
A
HOH
193
3
HOH
HOH
193
A
HOH
194
3
HOH
HOH
194
A
HOH
195
3
HOH
HOH
195
A
HOH
196
3
HOH
HOH
196
A
HOH
197
3
HOH
HOH
197
A
HOH
198
3
HOH
HOH
198
A
HOH
199
3
HOH
HOH
199
A
HOH
200
3
HOH
HOH
200
A
HOH
201
3
HOH
HOH
201
A
HOH
202
3
HOH
HOH
202
A
HOH
203
3
HOH
HOH
203
A
HOH
204
3
HOH
HOH
204
A
HOH
205
3
HOH
HOH
205
A
HOH
206
3
HOH
HOH
206
A
HOH
207
3
HOH
HOH
207
A
HOH
208
3
HOH
HOH
208
A
HOH
209
3
HOH
HOH
209
A
HOH
210
3
HOH
HOH
210
A
HOH
211
3
HOH
HOH
211
A
GLY
227
n
1
GLY
227
A
MET
228
n
2
MET
228
A
SER
229
n
3
SER
229
A
PRO
230
n
4
PRO
230
A
ASN
231
n
5
ASN
231
A
TYR
232
n
6
TYR
232
A
ASP
233
n
7
ASP
233
A
LYS
234
n
8
LYS
234
A
TRP
235
n
9
TRP
235
A
GLU
236
n
10
GLU
236
A
MET
237
n
11
MET
237
A
GLU
238
n
12
GLU
238
A
ARG
239
n
13
ARG
239
A
THR
240
n
14
THR
240
A
ASP
241
n
15
ASP
241
A
ILE
242
n
16
ILE
242
A
THR
243
n
17
THR
243
A
MET
244
n
18
MET
244
A
LYS
245
n
19
LYS
245
A
HIS
246
n
20
HIS
246
A
LYS
247
n
21
LYS
247
A
LEU
248
n
22
LEU
248
A
GLY
249
n
23
GLY
249
A
GLY
250
n
24
GLY
250
A
GLY
251
n
25
GLY
251
A
GLN
252
n
26
GLN
252
A
TYR
253
n
27
TYR
253
A
GLY
254
n
28
GLY
254
A
GLU
255
n
29
GLU
255
A
VAL
256
n
30
VAL
256
A
TYR
257
n
31
TYR
257
A
GLU
258
n
32
GLU
258
A
GLY
259
n
33
GLY
259
A
VAL
260
n
34
VAL
260
A
TRP
261
n
35
TRP
261
A
LYS
262
n
36
LYS
262
A
LYS
263
n
37
LYS
263
A
TYR
264
n
38
TYR
264
A
SER
265
n
39
SER
265
A
LEU
266
n
40
LEU
266
A
THR
267
n
41
THR
267
A
VAL
268
n
42
VAL
268
A
ALA
269
n
43
ALA
269
A
VAL
270
n
44
VAL
270
A
LYS
271
n
45
LYS
271
A
THR
272
n
46
THR
272
A
LEU
273
n
47
LEU
273
A
LYS
274
n
48
LYS
274
A
GLU
275
n
49
GLU
275
A
ASP
276
n
50
ASP
276
A
THR
277
n
51
THR
277
A
MET
278
n
52
MET
278
A
GLU
279
n
53
GLU
279
A
VAL
280
n
54
VAL
280
A
GLU
281
n
55
GLU
281
A
GLU
282
n
56
GLU
282
A
PHE
283
n
57
PHE
283
A
LEU
284
n
58
LEU
284
A
LYS
285
n
59
LYS
285
A
GLU
286
n
60
GLU
286
A
ALA
287
n
61
ALA
287
A
ALA
288
n
62
ALA
288
A
VAL
289
n
63
VAL
289
A
MET
290
n
64
MET
290
A
LYS
291
n
65
LYS
291
A
GLU
292
n
66
GLU
292
A
ILE
293
n
67
ILE
293
A
LYS
294
n
68
LYS
294
A
HIS
295
n
69
HIS
295
A
PRO
296
n
70
PRO
296
A
ASN
297
n
71
ASN
297
A
LEU
298
n
72
LEU
298
A
VAL
299
n
73
VAL
299
A
GLN
300
n
74
GLN
300
A
LEU
301
n
75
LEU
301
A
LEU
302
n
76
LEU
302
A
GLY
303
n
77
GLY
303
A
VAL
304
n
78
VAL
304
A
CYS
305
n
79
CYS
305
A
THR
306
n
80
THR
306
A
ARG
307
n
81
ARG
307
A
GLU
308
n
82
GLU
308
A
PRO
309
n
83
PRO
309
A
PRO
310
n
84
PRO
310
A
PHE
311
n
85
PHE
311
A
TYR
312
n
86
TYR
312
A
ILE
313
n
87
ILE
313
A
ILE
314
n
88
ILE
314
A
THR
315
n
89
THR
315
A
GLU
316
n
90
GLU
316
A
PHE
317
n
91
PHE
317
A
MET
318
n
92
MET
318
A
THR
319
n
93
THR
319
A
TYR
320
n
94
TYR
320
A
GLY
321
n
95
GLY
321
A
ASN
322
n
96
ASN
322
A
LEU
323
n
97
LEU
323
A
LEU
324
n
98
LEU
324
A
ASP
325
n
99
ASP
325
A
TYR
326
n
100
TYR
326
A
LEU
327
n
101
LEU
327
A
ARG
328
n
102
ARG
328
A
GLU
329
n
103
GLU
329
A
CYS
330
n
104
CYS
330
A
ASN
331
n
105
ASN
331
A
ARG
332
n
106
ARG
332
A
GLN
333
n
107
GLN
333
A
GLU
334
n
108
GLU
334
A
VAL
335
n
109
VAL
335
A
ASN
336
n
110
ASN
336
A
ALA
337
n
111
ALA
337
A
VAL
338
n
112
VAL
338
A
VAL
339
n
113
VAL
339
A
LEU
340
n
114
LEU
340
A
LEU
341
n
115
LEU
341
A
TYR
342
n
116
TYR
342
A
MET
343
n
117
MET
343
A
ALA
344
n
118
ALA
344
A
THR
345
n
119
THR
345
A
GLN
346
n
120
GLN
346
A
ILE
347
n
121
ILE
347
A
SER
348
n
122
SER
348
A
SER
349
n
123
SER
349
A
ALA
350
n
124
ALA
350
A
MET
351
n
125
MET
351
A
GLU
352
n
126
GLU
352
A
TYR
353
n
127
TYR
353
A
LEU
354
n
128
LEU
354
A
GLU
355
n
129
GLU
355
A
LYS
356
n
130
LYS
356
A
LYS
357
n
131
LYS
357
A
ASN
358
n
132
ASN
358
A
PHE
359
n
133
PHE
359
A
ILE
360
n
134
ILE
360
A
HIS
361
n
135
HIS
361
A
ARG
362
n
136
ARG
362
A
ASP
363
n
137
ASP
363
A
LEU
364
n
138
LEU
364
A
ALA
365
n
139
ALA
365
A
ALA
366
n
140
ALA
366
A
ARG
367
n
141
ARG
367
A
ASN
368
n
142
ASN
368
A
CYS
369
n
143
CYS
369
A
LEU
370
n
144
LEU
370
A
VAL
371
n
145
VAL
371
A
GLY
372
n
146
GLY
372
A
GLU
373
n
147
GLU
373
A
ASN
374
n
148
ASN
374
A
HIS
375
n
149
HIS
375
A
LEU
376
n
150
LEU
376
A
VAL
377
n
151
VAL
377
A
LYS
378
n
152
LYS
378
A
VAL
379
n
153
VAL
379
A
ALA
380
n
154
ALA
380
A
ASP
381
n
155
ASP
381
A
PHE
382
n
156
PHE
382
A
GLY
383
n
157
GLY
383
A
LEU
384
n
158
LEU
384
A
SER
385
n
159
SER
385
A
ARG
386
n
160
ARG
386
A
LEU
387
n
161
LEU
387
A
MET
388
n
162
MET
388
A
THR
389
n
163
THR
389
A
GLY
390
n
164
GLY
390
A
ASP
391
n
165
ASP
391
A
THR
392
n
166
THR
392
A
TYR
393
n
167
TYR
393
A
THR
394
n
168
THR
394
A
ALA
395
n
169
ALA
395
A
PRO
396
n
170
PRO
396
A
ALA
397
n
171
ALA
397
A
GLY
398
n
172
GLY
398
A
ALA
399
n
173
ALA
399
A
LYS
400
n
174
LYS
400
A
PHE
401
n
175
PHE
401
A
PRO
402
n
176
PRO
402
A
ILE
403
n
177
ILE
403
A
LYS
404
n
178
LYS
404
A
TRP
405
n
179
TRP
405
A
THR
406
n
180
THR
406
A
ALA
407
n
181
ALA
407
A
PRO
408
n
182
PRO
408
A
GLU
409
n
183
GLU
409
A
SER
410
n
184
SER
410
A
LEU
411
n
185
LEU
411
A
ALA
412
n
186
ALA
412
A
TYR
413
n
187
TYR
413
A
ASN
414
n
188
ASN
414
A
LYS
415
n
189
LYS
415
A
PHE
416
n
190
PHE
416
A
SER
417
n
191
SER
417
A
ILE
418
n
192
ILE
418
A
LYS
419
n
193
LYS
419
A
SER
420
n
194
SER
420
A
ASP
421
n
195
ASP
421
A
VAL
422
n
196
VAL
422
A
TRP
423
n
197
TRP
423
A
ALA
424
n
198
ALA
424
A
PHE
425
n
199
PHE
425
A
GLY
426
n
200
GLY
426
A
VAL
427
n
201
VAL
427
A
LEU
428
n
202
LEU
428
A
LEU
429
n
203
LEU
429
A
TRP
430
n
204
TRP
430
A
GLU
431
n
205
GLU
431
A
ILE
432
n
206
ILE
432
A
ALA
433
n
207
ALA
433
A
THR
434
n
208
THR
434
A
TYR
435
n
209
TYR
435
A
GLY
436
n
210
GLY
436
A
MET
437
n
211
MET
437
A
SER
438
n
212
SER
438
A
PRO
439
n
213
PRO
439
A
TYR
440
n
214
TYR
440
A
PRO
441
n
215
PRO
441
A
GLY
442
n
216
GLY
442
A
ILE
443
n
217
ILE
443
A
ASP
444
n
218
ASP
444
A
LEU
445
n
219
LEU
445
A
SER
446
n
220
SER
446
A
GLN
447
n
221
GLN
447
A
VAL
448
n
222
VAL
448
A
TYR
449
n
223
TYR
449
A
GLU
450
n
224
GLU
450
A
LEU
451
n
225
LEU
451
A
LEU
452
n
226
LEU
452
A
GLU
453
n
227
GLU
453
A
LYS
454
n
228
LYS
454
A
ASP
455
n
229
ASP
455
A
TYR
456
n
230
TYR
456
A
ARG
457
n
231
ARG
457
A
MET
458
n
232
MET
458
A
GLU
459
n
233
GLU
459
A
ARG
460
n
234
ARG
460
A
PRO
461
n
235
PRO
461
A
GLU
462
n
236
GLU
462
A
GLY
463
n
237
GLY
463
A
CYS
464
n
238
CYS
464
A
PRO
465
n
239
PRO
465
A
GLU
466
n
240
GLU
466
A
LYS
467
n
241
LYS
467
A
VAL
468
n
242
VAL
468
A
TYR
469
n
243
TYR
469
A
GLU
470
n
244
GLU
470
A
LEU
471
n
245
LEU
471
A
MET
472
n
246
MET
472
A
ARG
473
n
247
ARG
473
A
ALA
474
n
248
ALA
474
A
CYS
475
n
249
CYS
475
A
TRP
476
n
250
TRP
476
A
GLN
477
n
251
GLN
477
A
TRP
478
n
252
TRP
478
A
ASN
479
n
253
ASN
479
A
PRO
480
n
254
PRO
480
A
SER
481
n
255
SER
481
A
ASP
482
n
256
ASP
482
A
ARG
483
n
257
ARG
483
A
PRO
484
n
258
PRO
484
A
SER
485
n
259
SER
485
A
PHE
486
n
260
PHE
486
A
ALA
487
n
261
ALA
487
A
GLU
488
n
262
GLU
488
A
ILE
489
n
263
ILE
489
A
HIS
490
n
264
HIS
490
A
GLN
491
n
265
GLN
491
A
ALA
492
n
266
ALA
492
A
PHE
493
n
267
PHE
493
A
GLU
494
n
268
GLU
494
A
THR
495
n
269
THR
495
A
MET
496
n
270
MET
496
A
PHE
497
n
271
PHE
497
A
GLN
498
n
272
GLN
498
A
GLU
499
n
273
GLU
499
A
SER
500
n
274
SER
500
A
SER
501
n
275
SER
501
A
ILE
502
n
276
ILE
502
A
SER
503
n
277
SER
503
A
ASP
504
n
278
ASP
504
A
GLU
505
n
279
GLU
505
A
VAL
506
n
280
VAL
506
A
GLU
507
n
281
GLU
507
A
LYS
508
n
282
LYS
508
A
GLU
509
n
283
GLU
509
A
LEU
510
n
284
LEU
510
A
GLY
511
n
285
GLY
511
A
LYS
512
n
286
LYS
512
A
GLN
513
n
287
GLN
513
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
243
A
N
THR
17
A
O
VAL
260
A
O
VAL
34
A
N
TYR
257
A
N
TYR
31
A
O
VAL
270
A
O
VAL
44
A
N
LYS
271
A
N
LYS
45
A
O
ILE
313
A
O
ILE
87
A
O
ILE
314
A
O
ILE
88
A
N
LEU
302
A
N
LEU
76
A
N
ILE
360
A
N
ILE
134
A
O
ARG
386
A
O
ARG
160
A
N
LEU
370
A
N
LEU
144
A
O
LYS
378
A
O
LYS
152
A
N
TYR
393
A
N
TYR
167
A
O
PHE
416
A
O
PHE
190
1
10.57
1.50
119.30
129.87
A
A
A
C
N
CA
GLU
PRO
PRO
308
309
309
Y
1
A
LYS
245
-116.25
-132.31
1
A
ASP
276
87.20
-57.87
1
A
THR
277
-6.01
144.69
1
A
PRO
309
10.53
-108.39
1
A
ASP
363
-154.44
42.78
1
A
ASP
381
46.92
83.86
1
A
PRO
402
-67.39
90.98
1
A
TYR
440
38.98
63.27
1
A
ASP
455
84.24
16.22
1
A
LEU
510
-59.60
-2.65
1
A
LYS
512
-168.29
-25.16
protein_rep.param
protein.top
vx680.par
carbohydrate.top
ion.param
water_rep.param
77.63
25.80
10.41
12.14
0.00
-1.55
-8.84
0.00
-3.30
Cross-validation method:
-> "throughout"
Free R value test set selection criteria:
-> "random"
0.239
0.006
0.207
0.207
0.207
1.91
44.29
1612
27297
23335
6.9
85.5
1.00
1.00
RANDOM
1
0
MOLECULAR REPLACEMENT
PDB ENTRY 1M52
Engh & Huber
CNS bulk solvent model used
47.7103
0.391374
0.28
0.23
5.00
0.29
0.25
1.91
1.91
44.29
211
2572
33
0
2328
0.006
1.3
21.7
0.69
0.365
0.039
0.294
1.99
87
1638
3399
1725
5.0
50.8
0.295
0.024
0.248
2.10
155
2192
3394
2347
6.6
69.2
0.294
0.021
0.248
2.23
205
2627
3404
2832
7.2
83.2
0.299
0.020
0.244
2.40
222
2816
3404
3038
7.3
89.2
0.26
0.017
0.215
2.64
239
2989
3397
3228
7.4
95.0
0.268
0.018
0.216
3.02
220
3074
3402
3294
6.7
96.8
0.223
0.015
0.191
3.81
224
3161
3425
3385
6.6
98.8
0.228
0.014
0.209
44.29
260
3226
3505
3486
7.5
99.4
1.90
50.00
2F4J
24731
0.121
1.036
1
90.400
0.529
1.90
1.97
1526
1.005
56.100
0.446
1.97
2.05
1976
1.016
72.900
0.387
2.05
2.14
2291
1.032
84.100
0.349
2.14
2.25
2537
1.064
93.200
0.303
2.25
2.39
2658
1.052
97.700
0.237
2.39
2.58
2721
1.047
99.800
0.177
2.58
2.84
2725
1.048
100.000
0.116
2.84
3.25
2752
1.040
99.900
0.081
3.25
4.09
2734
1.037
99.800
0.055
4.09
50.00
2811
0.988
99.900
data reduction
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
DENZO
package
data scaling
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
SCALEPACK
package
phasing
R. J. Read
cimr-phaser@lists.cam.ac.uk
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
refinement
Axel T. Brunger
axel.brunger@yale.edu
1998
Fortran_77
http://cns.csb.yale.edu/v1.1/
CNS
package
1.1
data extraction
PDB
sw-help@rcsb.rutgers.edu
OCT. 28, 2005
C++
http://pdb.rutgers.edu/software/
PDB_EXTRACT
package
1.701
data reduction
HKL-2000
Structure of the Kinase Domain of an Imatinib-Resistant Abl Mutant in Complex with the Aurora Kinase Inhibitor VX-680
1
N
N
2
N
N
3
N
N
A
GLU
238
A
GLU
12
HELX_P
A
THR
240
A
THR
14
5
1
3
A
GLY
249
A
GLY
23
HELX_P
A
GLN
252
A
GLN
26
5
2
4
A
LYS
263
A
LYS
37
HELX_P
A
SER
265
A
SER
39
5
3
3
A
GLU
279
A
GLU
53
HELX_P
A
LYS
291
A
LYS
65
1
4
13
A
ASN
322
A
ASN
96
HELX_P
A
CYS
330
A
CYS
104
1
5
9
A
ASN
336
A
ASN
110
HELX_P
A
ASN
358
A
ASN
132
1
6
23
A
ALA
365
A
ALA
139
HELX_P
A
ARG
367
A
ARG
141
5
7
3
A
GLU
373
A
GLU
147
HELX_P
A
HIS
375
A
HIS
149
5
8
3
A
PRO
402
A
PRO
176
HELX_P
A
THR
406
A
THR
180
5
9
5
A
ALA
407
A
ALA
181
HELX_P
A
ASN
414
A
ASN
188
1
10
8
A
SER
417
A
SER
191
HELX_P
A
THR
434
A
THR
208
1
11
18
A
ASP
444
A
ASP
218
HELX_P
A
SER
446
A
SER
220
5
12
3
A
GLN
447
A
GLN
221
HELX_P
A
LYS
454
A
LYS
228
1
13
8
A
PRO
465
A
PRO
239
HELX_P
A
TRP
476
A
TRP
250
1
14
12
A
ASN
479
A
ASN
253
HELX_P
A
ARG
483
A
ARG
257
5
15
5
A
SER
485
A
SER
259
HELX_P
A
LEU
510
A
LEU
284
1
16
26
TRANSFERASE
kinase, kinase inhibitor, abl, TRANSFERASE
NP_005148
GB
1
227
62362414
GVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT
REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR
LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPE
KVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKQ
227
513
2F4J
227
513
62362414
A
1
1
287
1
HIS
engineered mutation
PRO
396
2F4J
A
62362414
GB
396
170
1
VAL
cloning artifact
MET
228
2F4J
A
62362414
GB
228
2
5
2
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
242
A
ILE
16
A
LYS
247
A
LYS
21
A
VAL
256
A
VAL
30
A
TRP
261
A
TRP
35
A
LEU
266
A
LEU
40
A
THR
272
A
THR
46
A
TYR
312
A
TYR
86
A
GLU
316
A
GLU
90
A
LEU
301
A
LEU
75
A
CYS
305
A
CYS
79
A
PHE
359
A
PHE
133
A
ILE
360
A
ILE
134
A
ARG
386
A
ARG
160
A
LEU
387
A
LEU
161
A
CYS
369
A
CYS
143
A
VAL
371
A
VAL
145
A
VAL
377
A
VAL
151
A
VAL
379
A
VAL
153
A
TYR
393
A
TYR
167
A
THR
394
A
THR
168
A
LYS
415
A
LYS
189
A
PHE
416
A
PHE
190
BINDING SITE FOR RESIDUE VX6 A 514
A
VX6
514
Software
16
A
HOH
9
C
HOH
16
1_555
A
HOH
16
C
HOH
16
1_555
A
GLY
249
A
GLY
23
16
1_555
A
TYR
253
A
TYR
27
16
1_555
A
VAL
256
A
VAL
30
16
1_555
A
ALA
269
A
ALA
43
16
1_555
A
LYS
271
A
LYS
45
16
1_555
A
GLU
286
A
GLU
60
16
1_555
A
THR
315
A
THR
89
16
1_555
A
GLU
316
A
GLU
90
16
1_555
A
PHE
317
A
PHE
91
16
1_555
A
MET
318
A
MET
92
16
1_555
A
THR
319
A
THR
93
16
1_555
A
GLY
321
A
GLY
95
16
1_555
A
LEU
370
A
LEU
144
16
1_555
A
ASP
381
A
ASP
155
16
1_555
4
P 1 21 1