0.004488 0.002591 0.000000 0.000000 0.005182 0.000000 0.000000 0.000000 0.013286 0.00000 0.00000 0.00000 Bogen, S.L. Ruan, S. Liu, R. Agrawal, S. Pichardo, J. Prongay, A. Baroudy, B. Saksena, A. Girijavallabhan, V. Njoroge, F.G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 36 90.00 90.00 120.00 222.811 222.811 75.266 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C35 H52 N6 O9 700.822 (2S,8R,9S,15S)-15-CYCLOHEXYL-9,12-BIS(CYCLOPROPYLMETHYL)-8-HYDROXY-20-METHYL-4,7,11,14,17-PENTAOXO-2-PHENYL-18-OXA-3,6,10,12,13,16-HEXAAZAHENICOSAN-1-OIC ACID non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N C N 75 N O N 76 N O N 77 N C N 78 N C N 79 N C N 80 N C N 81 N N N 82 S C N 83 N C N 84 N C N 85 N C N 86 N C N 87 N C N 88 N C N 89 N C N 90 N O N 91 N N N 92 N C N 93 N O N 94 N C N 95 N C N 96 N C N 97 N C N 98 N N N 99 S C N 100 N C N 101 N C N 102 N C N 103 N C N 104 N O N 105 R C N 106 N O N 107 N C N 108 N N N 109 S C Y 110 N C Y 111 N C Y 112 N C Y 113 N C Y 114 N C Y 115 N C N 116 N C N 117 N O N 118 N O N 119 N N N 120 N N N 121 N C N 122 N O N 123 N C N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N N N 177 R C N 178 N C N 179 N O N 180 N C N 181 N S N 182 N O N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N N N 191 S C N 192 N C N 193 N O N 194 N C N 195 N C N 196 N C N 197 N O N 198 N N N 199 N O N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N N N 211 S C N 212 N C N 213 N O N 214 N C N 215 N C N 216 N C N 217 N O N 218 N O N 219 N O N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N N N 230 N C N 231 N C N 232 N O N 233 N O N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N N N 240 S C N 241 N C N 242 N O N 243 N C Y 244 N C Y 245 N N Y 246 N C Y 247 N C Y 248 N N N 249 N O N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N O N 261 N H N 262 N H N 263 N N N 264 S C N 265 N C N 266 N O N 267 S C N 268 N C N 269 N C N 270 N C N 271 N O N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N N N 286 S C N 287 N C N 288 N O N 289 N C N 290 N C N 291 N C N 292 N C N 293 N O N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C N 312 N C N 313 N C N 314 N C N 315 N N N 316 N O N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N N N 333 S C N 334 N C N 335 N O N 336 N C N 337 N C N 338 N S N 339 N C N 340 N O N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N N N 353 S C N 354 N C N 355 N O N 356 N C Y 357 N C Y 358 N C Y 359 N C Y 360 N C Y 361 N C Y 362 N C N 363 N O N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N N N 376 S C N 377 N C N 378 N O N 379 N C N 380 N C N 381 N C N 382 N O N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N N N 393 S C N 394 N C N 395 N O N 396 N C N 397 N O N 398 N O N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N N N 407 S C N 408 N C N 409 N O N 410 R C N 411 N O N 412 N C N 413 N O N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N N N 424 S C N 425 N C N 426 N O N 427 N C Y 428 N C Y 429 N C Y 430 N C Y 431 N N Y 432 N C Y 433 N C Y 434 N C Y 435 N C Y 436 N C N 437 N O N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N N N 451 S C N 452 N C N 453 N O N 454 N C Y 455 N C Y 456 N C Y 457 N C Y 458 N C Y 459 N C Y 460 N C N 461 N O N 462 N O N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N N N 475 S C N 476 N C N 477 N O N 478 N C N 479 N C N 480 N C N 481 N O N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 491 N H N 492 N H N 493 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N doub N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N doub N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing Y 156 N doub Y 157 N sing Y 158 N doub N 159 N sing Y 160 N sing N 161 N sing Y 162 N sing N 163 N sing Y 164 N doub N 165 N sing N 166 N sing N 167 N doub N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N doub N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N doub N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N doub N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N doub N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N doub N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N doub N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N doub N 241 N sing N 242 N sing N 243 N sing N 244 N sing Y 245 N sing Y 246 N doub Y 247 N doub N 248 N sing Y 249 N sing N 250 N sing Y 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N doub N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N doub N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N doub N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N doub N 349 N sing N 350 N sing N 351 N sing N 352 N sing Y 353 N doub Y 354 N sing Y 355 N sing N 356 N sing Y 357 N doub N 358 N sing Y 359 N doub N 360 N sing Y 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N doub N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N doub N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N doub N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N doub N 418 N sing N 419 N sing N 420 N sing N 421 N sing Y 422 N doub Y 423 N sing Y 424 N sing N 425 N sing Y 426 N doub Y 427 N sing Y 428 N sing N 429 N sing Y 430 N sing Y 431 N doub N 432 N sing Y 433 N doub N 434 N sing Y 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N sing N 447 N sing N 448 N sing N 449 N sing Y 450 N doub Y 451 N sing Y 452 N sing N 453 N sing Y 454 N doub N 455 N sing Y 456 N doub N 457 N sing Y 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N doub N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing UK Bioorg.Med.Chem.Lett. BMCLE8 1127 0960-894X 16 1621 1627 10.1016/j.bmcl.2005.12.013 16387495 Depeptidization efforts on P3-P2 a-ketoamide inhibitors of HCV NS3-4A serine protease: Effect on HCV replicon activity. 2006 US Cell(Cambridge,Mass.) CELLB5 0998 0092-8674 87 343 355 10.1016/S0092-8674(00)81351-3 8861917 Crystal Structure of the Hepatitis C Virus NS3 Protease Domain Complexed with a Synthetic NS4a Cofactor Peptide 1996 UK Bioorg.Med.Chem.Lett. BMCLE8 1127 0960-894X 15 4515 4519 10.1016/j.bmcl.2005.07.009 16112862 Hepatitis C virus NS3-4A serine protease inhibitors: Use of a P2-P1 cyclopropyl alanine combination to improve potency. 2005 US J.Med.Chem. JMCMAR 0151 0022-2623 48 5088 5091 10.1021/jm0489556 16078825 Design and Synthesis of Depeptidized Macrocyclic Inhibitors of Hepatitis C NS3-4A Protease Using Structure-Based Drug Design 2005 GE Angew.Chem.Int.Ed.Engl. ACIEAY 0179 0570-0833 44 7024 7028 10.1002/anie.200501553 16211639 Proline-Based Macrocyclic Inhibitors of the Hepatitis C Virus: Stereoselective Synthesis and Biological Activity. 2005 UK Bioorg.Med.Chem.Lett. BMCLE8 1127 0960-894X 14 5751 5755 10.1016/j.bmcl.2004.09.058 15501035 Novel 2-oxoimidazolidine-4-carboxylic acid derivatives as Hepatitis C virus NS3-4A serine protease inhibitors: synthesis, activity and X-ray crystal structure of an enzyme inhibitor complex 2004 10.2210/pdb2f9v/pdb pdb_00002f9v 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 95.0 1 OSMIC GREEN IMAGE PLATE 2000-02-27 RIGAKU RAXIS IV OSMIC GREEN SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RUH3R 21290.277 NS3 protease/helicase protease domain (Residues : 1-181) 2 man polymer 2394.039 polyprotein Residues 21-39 2 syn polymer ketoamide peptide 65.409 ZINC ION 2 syn non-polymer 700.822 (2S,8R,9S,15S)-15-CYCLOHEXYL-9,12-BIS(CYCLOPROPYLMETHYL)-8-HYDROXY-20-METHYL-4,7,11,14,17-PENTAOXO-2-PHENYL-18-OXA-3,6,10,12,13,16-HEXAAZAHENICOSAN-1-OIC ACID 1 syn non-polymer 18.015 water 132 nat water no no MGASMTGGQQMGAPITAYAQQTRGLLGCIITSLTGRDKNQVEGEVQIVSTATQTFLATCINGVCWTVYHGAGTRTIASPK GPVIQMYTNVDQDLVGWPAPQGSRSLTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRPISYLKGSSGGPLLCPAG HAVGLFRAAVCTRGVAKAVDFIPVENLETTMRSGSHHHHHH MGASMTGGQQMGAPITAYAQQTRGLLGCIITSLTGRDKNQVEGEVQIVSTATQTFLATCINGVCWTVYHGAGTRTIASPK GPVIQMYTNVDQDLVGWPAPQGSRSLTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRPISYLKGSSGGPLLCPAG HAVGLFRAAVCTRGVAKAVDFIPVENLETTMRSGSHHHHHH A,C polypeptide(L) no no KKGSVVIVGRIVLSGKPAIIPKK KKGSVVIVGRIVLSGKPAIIPKK B,D polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Hepacivirus H Escherichia sample NS3 protease domain ( residues 1027-1207 of the polyprotein). 11103 Hepatitis C virus 562 Escherichia coli JM109(DE3) plasmid NS3(181)His6/pET22b 1 3.82 67.83 5.70 12-15 mG/mL Protein in 15 mM MES, pH 6.5 - 1.0 M NaCl equivolume mixture with (0.85-1.05M) NaCl- 0.1M MES-0.1 M Na/KPO4, pH5.5-5.8 - 5mM BME, equilibrated with 1.35-1.55M NaCl-0.1M MES-0.1M Na/KPO4, pH 5.6-5.8 - 5 mM BME, VAPOR DIFFUSION, HANGING DROP, temperature 285K, pH 5.70 285 database_2 pdbx_struct_conn_angle struct_conn struct_conn_type struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond entity pdbx_entity_src_syn repository Initial release Version format compliance Version format compliance Database references Derived calculations Data collection Source and taxonomy Structure summary 1 0 2007-01-09 1 1 2008-05-01 1 2 2011-07-13 1 3 2021-10-20 1 4 2024-03-13 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn_type.id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _entity.details Same protein without inhibitor A different strain of the same protein Same protein with a different inhibitor Same protein with a different inhibitor Same protein with a different inhibitor Same protein with a different inhibitor RCSB Y RCSB 2005-12-06 REL REL ZN ZINC ION BN6 (2S,8R,9S,15S)-15-CYCLOHEXYL-9,12-BIS(CYCLOPROPYLMETHYL)-8-HYDROXY-20-METHYL-4,7,11,14,17-PENTAOXO-2-PHENYL-18-OXA-3,6,10,12,13,16-HEXAAZAHENICOSAN-1-OIC ACID HOH water Solid-phase peptide synthesis of the NS4a residues 21-39 peptide with N-terminal KK and C-terminal KK extensions. sample ZN 901 3 ZN ZN 901 A BN6 999 4 BN6 BN6 999 A ZN 902 3 ZN ZN 902 C HOH 2 5 HOH HOH 1000 A HOH 3 5 HOH HOH 1001 A HOH 4 5 HOH HOH 1002 A HOH 6 5 HOH HOH 1003 A HOH 10 5 HOH HOH 1004 A HOH 12 5 HOH HOH 1005 A HOH 14 5 HOH HOH 1006 A HOH 16 5 HOH HOH 1007 A HOH 17 5 HOH HOH 1008 A HOH 18 5 HOH HOH 1009 A HOH 20 5 HOH HOH 1010 A HOH 23 5 HOH HOH 1011 A HOH 24 5 HOH HOH 1012 A HOH 28 5 HOH HOH 1013 A HOH 30 5 HOH HOH 1014 A HOH 31 5 HOH HOH 1015 A HOH 33 5 HOH HOH 1016 A HOH 35 5 HOH HOH 1017 A HOH 36 5 HOH HOH 1018 A HOH 37 5 HOH HOH 1019 A HOH 38 5 HOH HOH 1020 A HOH 39 5 HOH HOH 1021 A HOH 40 5 HOH HOH 1022 A HOH 41 5 HOH HOH 1023 A HOH 42 5 HOH HOH 1024 A HOH 43 5 HOH HOH 1025 A HOH 50 5 HOH HOH 1026 A HOH 51 5 HOH HOH 1027 A HOH 55 5 HOH HOH 1028 A HOH 56 5 HOH HOH 1029 A HOH 58 5 HOH HOH 1030 A HOH 61 5 HOH HOH 1031 A HOH 64 5 HOH HOH 1032 A HOH 66 5 HOH HOH 1033 A HOH 68 5 HOH HOH 1034 A HOH 69 5 HOH HOH 1035 A HOH 70 5 HOH HOH 1036 A HOH 73 5 HOH HOH 1037 A HOH 74 5 HOH HOH 1038 A HOH 76 5 HOH HOH 1039 A HOH 77 5 HOH HOH 1040 A HOH 81 5 HOH HOH 1041 A HOH 82 5 HOH HOH 1042 A HOH 88 5 HOH HOH 1043 A HOH 93 5 HOH HOH 1044 A HOH 94 5 HOH HOH 1045 A HOH 96 5 HOH HOH 1046 A HOH 98 5 HOH HOH 1047 A HOH 99 5 HOH HOH 1048 A HOH 101 5 HOH HOH 1049 A HOH 103 5 HOH HOH 1050 A HOH 105 5 HOH HOH 1051 A HOH 106 5 HOH HOH 1052 A HOH 109 5 HOH HOH 1053 A HOH 114 5 HOH HOH 1054 A HOH 115 5 HOH HOH 1055 A HOH 117 5 HOH HOH 1056 A HOH 121 5 HOH HOH 1057 A HOH 122 5 HOH HOH 1058 A HOH 123 5 HOH HOH 1059 A HOH 124 5 HOH HOH 1060 A HOH 126 5 HOH HOH 1061 A HOH 128 5 HOH HOH 1062 A HOH 129 5 HOH HOH 1063 A HOH 131 5 HOH HOH 1064 A HOH 132 5 HOH HOH 1065 A HOH 8 5 HOH HOH 42 B HOH 19 5 HOH HOH 43 B HOH 21 5 HOH HOH 44 B HOH 22 5 HOH HOH 45 B HOH 83 5 HOH HOH 46 B HOH 95 5 HOH HOH 47 B HOH 104 5 HOH HOH 48 B HOH 125 5 HOH HOH 49 B HOH 5 5 HOH HOH 903 C HOH 7 5 HOH HOH 904 C HOH 9 5 HOH HOH 905 C HOH 11 5 HOH HOH 906 C HOH 13 5 HOH HOH 907 C HOH 25 5 HOH HOH 908 C HOH 26 5 HOH HOH 909 C HOH 27 5 HOH HOH 910 C HOH 29 5 HOH HOH 911 C HOH 32 5 HOH HOH 912 C HOH 34 5 HOH HOH 913 C HOH 44 5 HOH HOH 914 C HOH 45 5 HOH HOH 915 C HOH 46 5 HOH HOH 916 C HOH 48 5 HOH HOH 917 C HOH 49 5 HOH HOH 918 C HOH 52 5 HOH HOH 919 C HOH 53 5 HOH HOH 920 C HOH 54 5 HOH HOH 921 C HOH 57 5 HOH HOH 922 C HOH 59 5 HOH HOH 923 C HOH 60 5 HOH HOH 924 C HOH 62 5 HOH HOH 925 C HOH 63 5 HOH HOH 926 C HOH 65 5 HOH HOH 927 C HOH 71 5 HOH HOH 928 C HOH 75 5 HOH HOH 929 C HOH 78 5 HOH HOH 930 C HOH 79 5 HOH HOH 931 C HOH 84 5 HOH HOH 932 C HOH 85 5 HOH HOH 933 C HOH 86 5 HOH HOH 934 C HOH 87 5 HOH HOH 935 C HOH 89 5 HOH HOH 936 C HOH 90 5 HOH HOH 937 C HOH 92 5 HOH HOH 938 C HOH 100 5 HOH HOH 939 C HOH 102 5 HOH HOH 940 C HOH 107 5 HOH HOH 941 C HOH 108 5 HOH HOH 942 C HOH 110 5 HOH HOH 943 C HOH 111 5 HOH HOH 944 C HOH 112 5 HOH HOH 945 C HOH 113 5 HOH HOH 946 C HOH 116 5 HOH HOH 947 C HOH 118 5 HOH HOH 948 C HOH 119 5 HOH HOH 949 C HOH 120 5 HOH HOH 950 C HOH 127 5 HOH HOH 951 C HOH 130 5 HOH HOH 952 C HOH 1 5 HOH HOH 1 D HOH 15 5 HOH HOH 15 D HOH 47 5 HOH HOH 47 D HOH 67 5 HOH HOH 67 D HOH 72 5 HOH HOH 72 D HOH 80 5 HOH HOH 80 D HOH 91 5 HOH HOH 91 D HOH 97 5 HOH HOH 97 D n 1 -11 A n 2 -10 A n 3 -9 A n 4 -8 A n 5 -7 A n 6 -6 A n 7 -5 A n 8 -4 A n 9 -3 A n 10 -2 A MET -1 n 11 MET -1 A GLY 0 n 12 GLY 0 A ALA 1 n 13 ALA 1 A PRO 2 n 14 PRO 2 A ILE 3 n 15 ILE 3 A THR 4 n 16 THR 4 A ALA 5 n 17 ALA 5 A TYR 6 n 18 TYR 6 A ALA 7 n 19 ALA 7 A GLN 8 n 20 GLN 8 A GLN 9 n 21 GLN 9 A THR 10 n 22 THR 10 A ARG 11 n 23 ARG 11 A GLY 12 n 24 GLY 12 A LEU 13 n 25 LEU 13 A LEU 14 n 26 LEU 14 A GLY 15 n 27 GLY 15 A CYS 16 n 28 CYS 16 A ILE 17 n 29 ILE 17 A ILE 18 n 30 ILE 18 A THR 19 n 31 THR 19 A SER 20 n 32 SER 20 A LEU 21 n 33 LEU 21 A THR 22 n 34 THR 22 A GLY 23 n 35 GLY 23 A ARG 24 n 36 ARG 24 A ASP 25 n 37 ASP 25 A LYS 26 n 38 LYS 26 A ASN 27 n 39 ASN 27 A GLN 28 n 40 GLN 28 A VAL 29 n 41 VAL 29 A GLU 30 n 42 GLU 30 A GLY 31 n 43 GLY 31 A GLU 32 n 44 GLU 32 A VAL 33 n 45 VAL 33 A GLN 34 n 46 GLN 34 A ILE 35 n 47 ILE 35 A VAL 36 n 48 VAL 36 A SER 37 n 49 SER 37 A THR 38 n 50 THR 38 A ALA 39 n 51 ALA 39 A THR 40 n 52 THR 40 A GLN 41 n 53 GLN 41 A THR 42 n 54 THR 42 A PHE 43 n 55 PHE 43 A LEU 44 n 56 LEU 44 A ALA 45 n 57 ALA 45 A THR 46 n 58 THR 46 A CYS 47 n 59 CYS 47 A ILE 48 n 60 ILE 48 A ASN 49 n 61 ASN 49 A GLY 50 n 62 GLY 50 A VAL 51 n 63 VAL 51 A CYS 52 n 64 CYS 52 A TRP 53 n 65 TRP 53 A THR 54 n 66 THR 54 A VAL 55 n 67 VAL 55 A TYR 56 n 68 TYR 56 A HIS 57 n 69 HIS 57 A GLY 58 n 70 GLY 58 A ALA 59 n 71 ALA 59 A GLY 60 n 72 GLY 60 A THR 61 n 73 THR 61 A ARG 62 n 74 ARG 62 A THR 63 n 75 THR 63 A ILE 64 n 76 ILE 64 A ALA 65 n 77 ALA 65 A SER 66 n 78 SER 66 A PRO 67 n 79 PRO 67 A LYS 68 n 80 LYS 68 A GLY 69 n 81 GLY 69 A PRO 70 n 82 PRO 70 A VAL 71 n 83 VAL 71 A ILE 72 n 84 ILE 72 A GLN 73 n 85 GLN 73 A MET 74 n 86 MET 74 A TYR 75 n 87 TYR 75 A THR 76 n 88 THR 76 A ASN 77 n 89 ASN 77 A VAL 78 n 90 VAL 78 A ASP 79 n 91 ASP 79 A GLN 80 n 92 GLN 80 A ASP 81 n 93 ASP 81 A LEU 82 n 94 LEU 82 A VAL 83 n 95 VAL 83 A GLY 84 n 96 GLY 84 A TRP 85 n 97 TRP 85 A PRO 86 n 98 PRO 86 A ALA 87 n 99 ALA 87 A PRO 88 n 100 PRO 88 A GLN 89 n 101 GLN 89 A GLY 90 n 102 GLY 90 A SER 91 n 103 SER 91 A ARG 92 n 104 ARG 92 A SER 93 n 105 SER 93 A LEU 94 n 106 LEU 94 A THR 95 n 107 THR 95 A PRO 96 n 108 PRO 96 A CYS 97 n 109 CYS 97 A THR 98 n 110 THR 98 A CYS 99 n 111 CYS 99 A GLY 100 n 112 GLY 100 A SER 101 n 113 SER 101 A SER 102 n 114 SER 102 A ASP 103 n 115 ASP 103 A LEU 104 n 116 LEU 104 A TYR 105 n 117 TYR 105 A LEU 106 n 118 LEU 106 A VAL 107 n 119 VAL 107 A THR 108 n 120 THR 108 A ARG 109 n 121 ARG 109 A HIS 110 n 122 HIS 110 A ALA 111 n 123 ALA 111 A ASP 112 n 124 ASP 112 A VAL 113 n 125 VAL 113 A ILE 114 n 126 ILE 114 A PRO 115 n 127 PRO 115 A VAL 116 n 128 VAL 116 A ARG 117 n 129 ARG 117 A ARG 118 n 130 ARG 118 A ARG 119 n 131 ARG 119 A GLY 120 n 132 GLY 120 A ASP 121 n 133 ASP 121 A SER 122 n 134 SER 122 A ARG 123 n 135 ARG 123 A GLY 124 n 136 GLY 124 A SER 125 n 137 SER 125 A LEU 126 n 138 LEU 126 A LEU 127 n 139 LEU 127 A SER 128 n 140 SER 128 A PRO 129 n 141 PRO 129 A ARG 130 n 142 ARG 130 A PRO 131 n 143 PRO 131 A ILE 132 n 144 ILE 132 A SER 133 n 145 SER 133 A TYR 134 n 146 TYR 134 A LEU 135 n 147 LEU 135 A LYS 136 n 148 LYS 136 A GLY 137 n 149 GLY 137 A SER 138 n 150 SER 138 A SER 139 n 151 SER 139 A GLY 140 n 152 GLY 140 A GLY 141 n 153 GLY 141 A PRO 142 n 154 PRO 142 A LEU 143 n 155 LEU 143 A LEU 144 n 156 LEU 144 A CYS 145 n 157 CYS 145 A PRO 146 n 158 PRO 146 A ALA 147 n 159 ALA 147 A GLY 148 n 160 GLY 148 A HIS 149 n 161 HIS 149 A ALA 150 n 162 ALA 150 A VAL 151 n 163 VAL 151 A GLY 152 n 164 GLY 152 A LEU 153 n 165 LEU 153 A PHE 154 n 166 PHE 154 A ARG 155 n 167 ARG 155 A ALA 156 n 168 ALA 156 A ALA 157 n 169 ALA 157 A VAL 158 n 170 VAL 158 A CYS 159 n 171 CYS 159 A THR 160 n 172 THR 160 A ARG 161 n 173 ARG 161 A GLY 162 n 174 GLY 162 A VAL 163 n 175 VAL 163 A ALA 164 n 176 ALA 164 A LYS 165 n 177 LYS 165 A ALA 166 n 178 ALA 166 A VAL 167 n 179 VAL 167 A ASP 168 n 180 ASP 168 A PHE 169 n 181 PHE 169 A ILE 170 n 182 ILE 170 A PRO 171 n 183 PRO 171 A VAL 172 n 184 VAL 172 A GLU 173 n 185 GLU 173 A ASN 174 n 186 ASN 174 A LEU 175 n 187 LEU 175 A GLU 176 n 188 GLU 176 A THR 177 n 189 THR 177 A THR 178 n 190 THR 178 A MET 179 n 191 MET 179 A ARG 180 n 192 ARG 180 A SER 181 n 193 SER 181 A n 194 182 A n 195 183 A n 196 184 A n 197 185 A n 198 186 A n 199 187 A n 200 188 A n 201 189 A n 1 19 B LYS 20 n 2 LYS 20 B GLY 21 n 3 GLY 21 B SER 22 n 4 SER 22 B VAL 23 n 5 VAL 23 B VAL 24 n 6 VAL 24 B ILE 25 n 7 ILE 25 B VAL 26 n 8 VAL 26 B GLY 27 n 9 GLY 27 B ARG 28 n 10 ARG 28 B ILE 29 n 11 ILE 29 B VAL 30 n 12 VAL 30 B LEU 31 n 13 LEU 31 B SER 32 n 14 SER 32 B GLY 33 n 15 GLY 33 B LYS 34 n 16 LYS 34 B PRO 35 n 17 PRO 35 B ALA 36 n 18 ALA 36 B ILE 37 n 19 ILE 37 B ILE 38 n 20 ILE 38 B PRO 39 n 21 PRO 39 B LYS 40 n 22 LYS 40 B LYS 41 n 23 LYS 41 B n 1 -11 C n 2 -10 C n 3 -9 C n 4 -8 C n 5 -7 C n 6 -6 C n 7 -5 C n 8 -4 C n 9 -3 C n 10 -2 C n 11 -1 C n 12 0 C n 13 1 C n 14 2 C n 15 3 C n 16 4 C n 17 5 C n 18 6 C n 19 7 C n 20 8 C n 21 9 C n 22 10 C n 23 11 C n 24 12 C n 25 13 C n 26 14 C n 27 15 C n 28 16 C n 29 17 C n 30 18 C n 31 19 C n 32 20 C n 33 21 C n 34 22 C n 35 23 C n 36 24 C n 37 25 C n 38 26 C n 39 27 C GLN 28 n 40 GLN 28 C VAL 29 n 41 VAL 29 C GLU 30 n 42 GLU 30 C GLY 31 n 43 GLY 31 C GLU 32 n 44 GLU 32 C VAL 33 n 45 VAL 33 C GLN 34 n 46 GLN 34 C ILE 35 n 47 ILE 35 C VAL 36 n 48 VAL 36 C SER 37 n 49 SER 37 C THR 38 n 50 THR 38 C ALA 39 n 51 ALA 39 C THR 40 n 52 THR 40 C GLN 41 n 53 GLN 41 C THR 42 n 54 THR 42 C PHE 43 n 55 PHE 43 C LEU 44 n 56 LEU 44 C ALA 45 n 57 ALA 45 C THR 46 n 58 THR 46 C CYS 47 n 59 CYS 47 C ILE 48 n 60 ILE 48 C ASN 49 n 61 ASN 49 C GLY 50 n 62 GLY 50 C VAL 51 n 63 VAL 51 C CYS 52 n 64 CYS 52 C TRP 53 n 65 TRP 53 C THR 54 n 66 THR 54 C VAL 55 n 67 VAL 55 C TYR 56 n 68 TYR 56 C HIS 57 n 69 HIS 57 C GLY 58 n 70 GLY 58 C ALA 59 n 71 ALA 59 C GLY 60 n 72 GLY 60 C THR 61 n 73 THR 61 C ARG 62 n 74 ARG 62 C THR 63 n 75 THR 63 C ILE 64 n 76 ILE 64 C ALA 65 n 77 ALA 65 C SER 66 n 78 SER 66 C PRO 67 n 79 PRO 67 C LYS 68 n 80 LYS 68 C GLY 69 n 81 GLY 69 C PRO 70 n 82 PRO 70 C VAL 71 n 83 VAL 71 C ILE 72 n 84 ILE 72 C GLN 73 n 85 GLN 73 C MET 74 n 86 MET 74 C TYR 75 n 87 TYR 75 C THR 76 n 88 THR 76 C ASN 77 n 89 ASN 77 C VAL 78 n 90 VAL 78 C ASP 79 n 91 ASP 79 C GLN 80 n 92 GLN 80 C ASP 81 n 93 ASP 81 C LEU 82 n 94 LEU 82 C VAL 83 n 95 VAL 83 C GLY 84 n 96 GLY 84 C TRP 85 n 97 TRP 85 C PRO 86 n 98 PRO 86 C ALA 87 n 99 ALA 87 C PRO 88 n 100 PRO 88 C GLN 89 n 101 GLN 89 C GLY 90 n 102 GLY 90 C SER 91 n 103 SER 91 C ARG 92 n 104 ARG 92 C SER 93 n 105 SER 93 C LEU 94 n 106 LEU 94 C THR 95 n 107 THR 95 C PRO 96 n 108 PRO 96 C CYS 97 n 109 CYS 97 C THR 98 n 110 THR 98 C CYS 99 n 111 CYS 99 C GLY 100 n 112 GLY 100 C SER 101 n 113 SER 101 C SER 102 n 114 SER 102 C ASP 103 n 115 ASP 103 C LEU 104 n 116 LEU 104 C TYR 105 n 117 TYR 105 C LEU 106 n 118 LEU 106 C VAL 107 n 119 VAL 107 C THR 108 n 120 THR 108 C ARG 109 n 121 ARG 109 C HIS 110 n 122 HIS 110 C ALA 111 n 123 ALA 111 C ASP 112 n 124 ASP 112 C VAL 113 n 125 VAL 113 C ILE 114 n 126 ILE 114 C PRO 115 n 127 PRO 115 C VAL 116 n 128 VAL 116 C ARG 117 n 129 ARG 117 C ARG 118 n 130 ARG 118 C ARG 119 n 131 ARG 119 C GLY 120 n 132 GLY 120 C ASP 121 n 133 ASP 121 C SER 122 n 134 SER 122 C ARG 123 n 135 ARG 123 C GLY 124 n 136 GLY 124 C SER 125 n 137 SER 125 C LEU 126 n 138 LEU 126 C LEU 127 n 139 LEU 127 C SER 128 n 140 SER 128 C PRO 129 n 141 PRO 129 C ARG 130 n 142 ARG 130 C PRO 131 n 143 PRO 131 C ILE 132 n 144 ILE 132 C SER 133 n 145 SER 133 C TYR 134 n 146 TYR 134 C LEU 135 n 147 LEU 135 C LYS 136 n 148 LYS 136 C GLY 137 n 149 GLY 137 C SER 138 n 150 SER 138 C SER 139 n 151 SER 139 C GLY 140 n 152 GLY 140 C GLY 141 n 153 GLY 141 C PRO 142 n 154 PRO 142 C LEU 143 n 155 LEU 143 C LEU 144 n 156 LEU 144 C CYS 145 n 157 CYS 145 C PRO 146 n 158 PRO 146 C ALA 147 n 159 ALA 147 C GLY 148 n 160 GLY 148 C HIS 149 n 161 HIS 149 C ALA 150 n 162 ALA 150 C VAL 151 n 163 VAL 151 C GLY 152 n 164 GLY 152 C LEU 153 n 165 LEU 153 C PHE 154 n 166 PHE 154 C ARG 155 n 167 ARG 155 C ALA 156 n 168 ALA 156 C ALA 157 n 169 ALA 157 C VAL 158 n 170 VAL 158 C CYS 159 n 171 CYS 159 C THR 160 n 172 THR 160 C ARG 161 n 173 ARG 161 C GLY 162 n 174 GLY 162 C VAL 163 n 175 VAL 163 C ALA 164 n 176 ALA 164 C LYS 165 n 177 LYS 165 C ALA 166 n 178 ALA 166 C VAL 167 n 179 VAL 167 C ASP 168 n 180 ASP 168 C PHE 169 n 181 PHE 169 C ILE 170 n 182 ILE 170 C PRO 171 n 183 PRO 171 C VAL 172 n 184 VAL 172 C GLU 173 n 185 GLU 173 C ASN 174 n 186 ASN 174 C LEU 175 n 187 LEU 175 C GLU 176 n 188 GLU 176 C THR 177 n 189 THR 177 C THR 178 n 190 THR 178 C MET 179 n 191 MET 179 C n 192 180 C n 193 181 C n 194 182 C n 195 183 C n 196 184 C n 197 185 C n 198 186 C n 199 187 C n 200 188 C n 201 189 C n 1 19 D n 2 20 D GLY 21 n 3 GLY 21 D SER 22 n 4 SER 22 D VAL 23 n 5 VAL 23 D VAL 24 n 6 VAL 24 D ILE 25 n 7 ILE 25 D VAL 26 n 8 VAL 26 D GLY 27 n 9 GLY 27 D ARG 28 n 10 ARG 28 D ILE 29 n 11 ILE 29 D VAL 30 n 12 VAL 30 D LEU 31 n 13 LEU 31 D SER 32 n 14 SER 32 D GLY 33 n 15 GLY 33 D LYS 34 n 16 LYS 34 D PRO 35 n 17 PRO 35 D ALA 36 n 18 ALA 36 D n 19 37 D n 20 38 D n 21 39 D n 22 40 D n 23 41 D author_and_software_defined_assembly PISA 4 tetrameric 7670 -129 15590 A CYS 97 A SG CYS 109 1_555 A ZN 901 E ZN ZN 1_555 A CYS 99 A SG CYS 111 1_555 91.8 A CYS 97 A SG CYS 109 1_555 A ZN 901 E ZN ZN 1_555 A CYS 145 A SG CYS 157 1_555 91.0 A CYS 99 A SG CYS 111 1_555 A ZN 901 E ZN ZN 1_555 A CYS 145 A SG CYS 157 1_555 108.9 A CYS 97 A SG CYS 109 1_555 A ZN 901 E ZN ZN 1_555 A HOH 1003 H O HOH 1_555 102.6 A CYS 99 A SG CYS 111 1_555 A ZN 901 E ZN ZN 1_555 A HOH 1003 H O HOH 1_555 121.7 A CYS 145 A SG CYS 157 1_555 A ZN 901 E ZN ZN 1_555 A HOH 1003 H O HOH 1_555 126.6 C CYS 97 C SG CYS 109 1_555 C ZN 902 G ZN ZN 1_555 C CYS 99 C SG CYS 111 1_555 98.4 C CYS 97 C SG CYS 109 1_555 C ZN 902 G ZN ZN 1_555 C CYS 145 C SG CYS 157 1_555 91.8 C CYS 99 C SG CYS 111 1_555 C ZN 902 G ZN ZN 1_555 C CYS 145 C SG CYS 157 1_555 116.0 C CYS 97 C SG CYS 109 1_555 C ZN 902 G ZN ZN 1_555 C HOH 903 J O HOH 1_555 106.5 C CYS 99 C SG CYS 111 1_555 C ZN 902 G ZN ZN 1_555 C HOH 903 J O HOH 1_555 111.7 C CYS 145 C SG CYS 157 1_555 C ZN 902 G ZN ZN 1_555 C HOH 903 J O HOH 1_555 125.3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N TYR 6 A N TYR 18 B O VAL 30 B O VAL 12 B O VAL 24 B O VAL 6 A N SER 37 A N SER 49 A N VAL 36 A N VAL 48 A O PHE 43 A O PHE 55 A N THR 46 A N THR 58 A O TRP 53 A O TRP 65 A N CYS 52 A N CYS 64 A O TRP 85 A O TRP 97 A O LEU 82 A O LEU 94 A N ASN 77 A N ASN 89 A N ILE 64 A N ILE 76 A O VAL 71 A O VAL 83 A N LEU 106 A N LEU 118 A O ILE 114 A O ILE 126 A N ARG 117 A N ARG 129 A O SER 125 A O SER 137 A N ARG 130 A N ARG 142 A O ALA 164 A O ALA 176 A O ASP 168 A O ASP 180 A N ALA 156 A N ALA 168 A O VAL 151 A O VAL 163 A N LEU 143 A N LEU 155 A O LEU 144 A O LEU 156 A N TYR 105 A N TYR 117 B N ALA 36 B N ALA 18 D O VAL 30 D O VAL 12 D O VAL 23 D O VAL 5 C N THR 63 C N THR 75 B N ALA 36 B N ALA 18 D O VAL 30 D O VAL 12 D O VAL 26 D O VAL 8 C N ILE 35 C N ILE 47 C N VAL 36 C N VAL 48 C O PHE 43 C O PHE 55 C N THR 46 C N THR 58 C O TRP 53 C O TRP 65 C N CYS 52 C N CYS 64 C O TRP 85 C O TRP 97 C O LEU 82 C O LEU 94 C N ASN 77 C N ASN 89 C N LEU 106 C N LEU 118 C O ILE 114 C O ILE 126 C N ARG 117 C N ARG 129 C O SER 125 C O SER 137 C N ARG 130 C N ARG 142 C O ALA 164 C O ALA 176 C O ASP 168 C O ASP 180 C N ALA 156 C N ALA 168 C O VAL 151 C O VAL 163 C N LEU 143 C N LEU 155 C O LEU 144 C O LEU 156 C N TYR 105 C N TYR 117 1 B O LYS 41 B O LYS 23 1 Y 1 A MET -11 A MET 1 1 Y 1 A GLY -10 A GLY 2 1 Y 1 A ALA -9 A ALA 3 1 Y 1 A SER -8 A SER 4 1 Y 1 A MET -7 A MET 5 1 Y 1 A THR -6 A THR 6 1 Y 1 A GLY -5 A GLY 7 1 Y 1 A GLY -4 A GLY 8 1 Y 1 A GLN -3 A GLN 9 1 Y 1 A GLN -2 A GLN 10 1 Y 1 A GLY 182 A GLY 194 1 Y 1 A SER 183 A SER 195 1 Y 1 A HIS 184 A HIS 196 1 Y 1 A HIS 185 A HIS 197 1 Y 1 A HIS 186 A HIS 198 1 Y 1 A HIS 187 A HIS 199 1 Y 1 A HIS 188 A HIS 200 1 Y 1 A HIS 189 A HIS 201 1 Y 1 B LYS 19 B LYS 1 1 Y 1 C MET -11 C MET 1 1 Y 1 C GLY -10 C GLY 2 1 Y 1 C ALA -9 C ALA 3 1 Y 1 C SER -8 C SER 4 1 Y 1 C MET -7 C MET 5 1 Y 1 C THR -6 C THR 6 1 Y 1 C GLY -5 C GLY 7 1 Y 1 C GLY -4 C GLY 8 1 Y 1 C GLN -3 C GLN 9 1 Y 1 C GLN -2 C GLN 10 1 Y 1 C MET -1 C MET 11 1 Y 1 C GLY 0 C GLY 12 1 Y 1 C ALA 1 C ALA 13 1 Y 1 C PRO 2 C PRO 14 1 Y 1 C ILE 3 C ILE 15 1 Y 1 C THR 4 C THR 16 1 Y 1 C ALA 5 C ALA 17 1 Y 1 C TYR 6 C TYR 18 1 Y 1 C ALA 7 C ALA 19 1 Y 1 C GLN 8 C GLN 20 1 Y 1 C GLN 9 C GLN 21 1 Y 1 C THR 10 C THR 22 1 Y 1 C ARG 11 C ARG 23 1 Y 1 C GLY 12 C GLY 24 1 Y 1 C LEU 13 C LEU 25 1 Y 1 C LEU 14 C LEU 26 1 Y 1 C GLY 15 C GLY 27 1 Y 1 C CYS 16 C CYS 28 1 Y 1 C ILE 17 C ILE 29 1 Y 1 C ILE 18 C ILE 30 1 Y 1 C THR 19 C THR 31 1 Y 1 C SER 20 C SER 32 1 Y 1 C LEU 21 C LEU 33 1 Y 1 C THR 22 C THR 34 1 Y 1 C GLY 23 C GLY 35 1 Y 1 C ARG 24 C ARG 36 1 Y 1 C ASP 25 C ASP 37 1 Y 1 C LYS 26 C LYS 38 1 Y 1 C ASN 27 C ASN 39 1 Y 1 C ARG 180 C ARG 192 1 Y 1 C SER 181 C SER 193 1 Y 1 C GLY 182 C GLY 194 1 Y 1 C SER 183 C SER 195 1 Y 1 C HIS 184 C HIS 196 1 Y 1 C HIS 185 C HIS 197 1 Y 1 C HIS 186 C HIS 198 1 Y 1 C HIS 187 C HIS 199 1 Y 1 C HIS 188 C HIS 200 1 Y 1 C HIS 189 C HIS 201 1 Y 1 D LYS 19 D LYS 1 1 Y 1 D LYS 20 D LYS 2 1 Y 1 D ILE 37 D ILE 19 1 Y 1 D ILE 38 D ILE 20 1 Y 1 D PRO 39 D PRO 21 1 Y 1 D LYS 40 D LYS 22 1 Y 1 D LYS 41 D LYS 23 1 Y 1 A PHE 43 -157.47 -159.73 1 A ASN 77 -152.56 79.32 1 A ASP 81 70.17 39.43 1 A THR 98 -140.65 29.17 1 A PRO 129 -46.91 159.03 1 A PRO 146 -43.63 -16.69 1 B PRO 35 -37.87 134.76 1 C PHE 43 -159.27 -158.49 1 C ASN 77 -102.72 76.89 1 C ASP 121 -28.68 -46.82 1 C SER 122 -140.97 29.26 1 C PRO 146 -55.40 -3.09 0.264 0.189 0.189 2.60 2.690 1983 21990 19887 9.4 93.8 RANDOM 1 1.000 FOURIER SYNTHESIS Engh & Huber 2.60 2.690 132 2928 52 0 2744 0.008 1.85 1.22 0.3453 0.3094 2.71 184 1906 8 7.8 80.2 37.31 2.600 2.690 2F9V 21990 1.970 0.088 1 16.8000 3.700 99.7 2.60 2.69 0.551 99.1 data collection HKL-2000 data scaling SCALEPACK model building X-PLOR refinement X-PLOR 98.1 data reduction HKL-2000 phasing X-PLOR HCV NS3 protease domain with NS4a peptide and a ketoamide inhibitor with P1 and P2 cyclopropylalannines 1 N N 2 N N 1 N N 2 N N 3 N N 4 N N 3 N N 5 N N 5 N N 5 N N 5 N N The NS3 protease domain, residues 1-181 of NS3, exists in a complex with an NS4a peptide and an inhibitor. There is a dimer of the NS3 domain-NS4a peptide complex, but only one monomer (Chains A and B) have the inhibitor bound to the active site. This dimer is the component of the asymmetric unit. In vivo, the protease domain is part of a multi enzyme protein (having both protease and helicase activities). The NS3 protease domain with the NS4A peptide is known to be catalytically active in the absence of the helicase domain, although it is not known whether it is active as a monomer or dimer. A GLY 12 A GLY 24 HELX_P A GLY 23 A GLY 35 1 1 12 A TYR 56 A TYR 68 HELX_P A GLY 60 A GLY 72 1 2 5 A ILE 132 A ILE 144 HELX_P A LYS 136 A LYS 148 1 3 5 A VAL 172 A VAL 184 HELX_P A SER 181 A SER 193 1 4 10 C TYR 56 C TYR 68 HELX_P C GLY 60 C GLY 72 1 5 5 C VAL 78 C VAL 90 HELX_P C GLN 80 C GLN 92 5 6 3 C ILE 132 C ILE 144 HELX_P C LYS 136 C LYS 148 1 7 5 C VAL 172 C VAL 184 HELX_P C MET 179 C MET 191 1 8 8 disulf 2.911 C CYS 97 C SG CYS 109 1_555 C CYS 145 C SG CYS 157 1_555 covale 1.398 none A SER 139 A OG SER 151 1_555 A BN6 999 F C33 BN6 1_555 metalc 2.206 A CYS 97 A SG CYS 109 1_555 A ZN 901 E ZN ZN 1_555 metalc 2.370 A CYS 99 A SG CYS 111 1_555 A ZN 901 E ZN ZN 1_555 metalc 2.245 A CYS 145 A SG CYS 157 1_555 A ZN 901 E ZN ZN 1_555 metalc 1.567 A ZN 901 E ZN ZN 1_555 A HOH 1003 H O HOH 1_555 metalc 2.056 C CYS 97 C SG CYS 109 1_555 C ZN 902 G ZN ZN 1_555 metalc 2.078 C CYS 99 C SG CYS 111 1_555 C ZN 902 G ZN ZN 1_555 metalc 1.996 C CYS 145 C SG CYS 157 1_555 C ZN 902 G ZN ZN 1_555 metalc 1.816 C ZN 902 G ZN ZN 1_555 C HOH 903 J O HOH 1_555 VIRAL PROTEIN HCV, Hepatitis C protease, NS3 protease, ketoamide inhibitor, VIRAL PROTEIN A ALA 1 A ALA 13 1 A PRO 2 A PRO 14 0.14 NP_803144 GB 1 1 28921568 APITAYAQQTRGLLGCIITSLTGRDKNQVEGEVQIVSTATQTFLATCINGVCWTVYHGAGTRTIASPKGPVIQMYTNVDQ DLVGWPAPQGSRSLTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRPISYLKGSSGGPLLCPAGHAVGLFRAAVCT RGVAKAVDFIPVENLETTMRS AAT94284 GB 2 575 51039195 GCVVIVGRIVLSGKPAIIP 1 181 2F9V -11 189 28921568 A 1 1 201 1 181 2F9V -11 189 28921568 C 1 1 201 575 593 2F9V 19 41 51039195 B 2 1 23 575 593 2F9V 19 41 51039195 D 2 1 23 1 cloning artifact MET -11 2F9V A 28921568 GB 1 1 cloning artifact GLY -10 2F9V A 28921568 GB 2 1 cloning artifact ALA -9 2F9V A 28921568 GB 3 1 cloning artifact SER -8 2F9V A 28921568 GB 4 1 cloning artifact MET -7 2F9V A 28921568 GB 5 1 cloning artifact THR -6 2F9V A 28921568 GB 6 1 cloning artifact GLY -5 2F9V A 28921568 GB 7 1 cloning artifact GLY -4 2F9V A 28921568 GB 8 1 cloning artifact GLN -3 2F9V A 28921568 GB 9 1 cloning artifact GLN -2 2F9V A 28921568 GB 10 1 cloning artifact MET -1 2F9V A 28921568 GB 11 1 cloning artifact GLY 0 2F9V A 28921568 GB 12 1 cloning artifact GLY 182 2F9V A 28921568 GB 194 1 cloning artifact SER 183 2F9V A 28921568 GB 195 1 expression tag HIS 184 2F9V A 28921568 GB 196 1 expression tag HIS 185 2F9V A 28921568 GB 197 1 expression tag HIS 186 2F9V A 28921568 GB 198 1 expression tag HIS 187 2F9V A 28921568 GB 199 1 expression tag HIS 188 2F9V A 28921568 GB 200 1 expression tag HIS 189 2F9V A 28921568 GB 201 2 cloning artifact MET -11 2F9V C 28921568 GB 1 2 cloning artifact GLY -10 2F9V C 28921568 GB 2 2 cloning artifact ALA -9 2F9V C 28921568 GB 3 2 cloning artifact SER -8 2F9V C 28921568 GB 4 2 cloning artifact MET -7 2F9V C 28921568 GB 5 2 cloning artifact THR -6 2F9V C 28921568 GB 6 2 cloning artifact GLY -5 2F9V C 28921568 GB 7 2 cloning artifact GLY -4 2F9V C 28921568 GB 8 2 cloning artifact GLN -3 2F9V C 28921568 GB 9 2 cloning artifact GLN -2 2F9V C 28921568 GB 10 2 cloning artifact MET -1 2F9V C 28921568 GB 11 2 cloning artifact GLY 0 2F9V C 28921568 GB 12 2 cloning artifact GLY 182 2F9V C 28921568 GB 194 2 cloning artifact SER 183 2F9V C 28921568 GB 195 2 expression tag HIS 184 2F9V C 28921568 GB 196 2 expression tag HIS 185 2F9V C 28921568 GB 197 2 expression tag HIS 186 2F9V C 28921568 GB 198 2 expression tag HIS 187 2F9V C 28921568 GB 199 2 expression tag HIS 188 2F9V C 28921568 GB 200 2 expression tag HIS 189 2F9V C 28921568 GB 201 3 cloning artifact LYS 19 2F9V B 51039195 GB 1 3 cloning artifact LYS 20 2F9V B 51039195 GB 2 3 CYS engineered mutation SER 22 2F9V B 51039195 GB 576 4 3 cloning artifact LYS 40 2F9V B 51039195 GB 22 3 cloning artifact LYS 41 2F9V B 51039195 GB 23 4 cloning artifact LYS 19 2F9V D 51039195 GB 1 4 cloning artifact LYS 20 2F9V D 51039195 GB 2 4 CYS engineered mutation SER 22 2F9V D 51039195 GB 576 4 4 cloning artifact LYS 40 2F9V D 51039195 GB 22 4 cloning artifact LYS 41 2F9V D 51039195 GB 23 7 2 7 3 7 7 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A TYR 6 A TYR 18 A GLN 9 A GLN 21 B VAL 24 B VAL 6 B VAL 30 B VAL 12 A VAL 33 A VAL 45 A SER 37 A SER 49 A THR 42 A THR 54 A ILE 48 A ILE 60 A VAL 51 A VAL 63 A VAL 55 A VAL 67 A LEU 82 A LEU 94 A PRO 86 A PRO 98 A TYR 75 A TYR 87 A ASN 77 A ASN 89 A ILE 64 A ILE 76 A SER 66 A SER 78 A GLY 69 A GLY 81 A VAL 71 A VAL 83 A ASP 103 A ASP 115 A VAL 107 A VAL 119 A VAL 113 A VAL 125 A ARG 118 A ARG 130 A ARG 123 A ARG 135 A PRO 131 A PRO 143 A VAL 163 A VAL 175 A PRO 171 A PRO 183 A ALA 150 A ALA 162 A THR 160 A THR 172 A PRO 142 A PRO 154 A LEU 144 A LEU 156 A ASP 103 A ASP 115 A VAL 107 A VAL 119 B ALA 36 B ALA 18 B ILE 37 B ILE 19 D SER 22 D SER 4 D VAL 30 D VAL 12 C THR 63 C THR 75 C ILE 64 C ILE 76 B ALA 36 B ALA 18 B ILE 37 B ILE 19 D SER 22 D SER 4 D VAL 30 D VAL 12 C VAL 33 C VAL 45 C SER 37 C SER 49 C THR 42 C THR 54 C ILE 48 C ILE 60 C VAL 51 C VAL 63 C VAL 55 C VAL 67 C LEU 82 C LEU 94 C PRO 86 C PRO 98 C TYR 75 C TYR 87 C ASN 77 C ASN 89 C ASP 103 C ASP 115 C VAL 107 C VAL 119 C VAL 113 C VAL 125 C GLY 120 C GLY 132 C ARG 123 C ARG 135 C PRO 131 C PRO 143 C VAL 163 C VAL 175 C PRO 171 C PRO 183 C ALA 150 C ALA 162 C THR 160 C THR 172 C PRO 142 C PRO 154 C LEU 144 C LEU 156 C ASP 103 C ASP 115 C VAL 107 C VAL 119 BINDING SITE FOR RESIDUE ZN A 901 A ZN 901 Software 4 BINDING SITE FOR RESIDUE ZN C 902 C ZN 902 Software 4 BINDING SITE FOR RESIDUE BN6 A 999 A BN6 999 Software 13 A CYS 97 A CYS 109 4 1_555 A CYS 99 A CYS 111 4 1_555 A CYS 145 A CYS 157 4 1_555 A HOH 1003 H HOH 4 1_555 C CYS 97 C CYS 109 4 1_555 C CYS 99 C CYS 111 4 1_555 C CYS 145 C CYS 157 4 1_555 C HOH 903 J HOH 4 1_555 A GLN 41 A GLN 53 13 1_555 A THR 42 A THR 54 13 1_555 A HIS 57 A HIS 69 13 1_555 A ILE 132 A ILE 144 13 1_555 A LYS 136 A LYS 148 13 1_555 A GLY 137 A GLY 149 13 1_555 A SER 138 A SER 150 13 1_555 A SER 139 A SER 151 13 1_555 A ARG 155 A ARG 167 13 1_555 A ALA 156 A ALA 168 13 1_555 A ALA 157 A ALA 169 13 1_555 A CYS 159 A CYS 171 13 1_555 A ASP 168 A ASP 180 13 1_555 155 H 3 2