0.012170
0.007027
0.000000
0.000000
0.014053
0.000000
0.000000
0.000000
0.016467
0.00000
0.00000
0.00000
Ofiteru, A.
Bucurenci, N.
Alexov, E.
Bertrand, T.
Briozzo, P.
Munier-Lehmann, H.
Tourneux, L.
Barzu, O.
Gilles, A.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
82.167
82.167
60.726
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
S
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
N
N
181
S
C
N
182
N
C
N
183
N
O
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
N
C
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
N
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
N
N
228
S
C
N
229
N
C
N
230
N
O
N
231
N
C
N
232
N
C
N
233
N
S
N
234
N
C
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
Y
252
N
C
Y
253
N
C
Y
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
O
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
R
C
N
306
N
O
N
307
N
C
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
N
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
N
356
N
O
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
N
C
N
374
N
C
N
375
N
C
N
376
N
O
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
Y
246
N
doub
Y
247
N
sing
Y
248
N
sing
N
249
N
sing
Y
250
N
doub
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
Y
315
N
doub
Y
316
N
sing
Y
317
N
sing
N
318
N
sing
Y
319
N
doub
Y
320
N
sing
Y
321
N
sing
N
322
N
sing
Y
323
N
sing
Y
324
N
doub
N
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
doub
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
Y
343
N
doub
Y
344
N
sing
Y
345
N
sing
N
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
UK
Febs J.
1742-464X
274
3363
3373
10.1111/j.1742-4658.2007.05870.x
17542990
Structural and functional consequences of single amino acid substitutions in the pyrimidine base binding pocket of Escherichia coli CMP kinase.
2007
10.2210/pdb2fem/pdb
pdb_00002fem
173
1
IMAGE PLATE
2001-06-14
MARRESEARCH
GRAPHITE
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU
24752.336
Cytidylate kinase
2.7.4.14
R188M
1
man
polymer
Cytidine monophosphate kinase; CK; CMP kinase; Protein mssA; p25
E.C.2.7.4.14
no
no
MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEV
ILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRML
QLQEKGFSVNFERLLAEIKERDDRDRNMAVAPLVPAADALVLDSTTLSIEQVIEKALQYARQKLALA
MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEV
ILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRML
QLQEKGFSVNFERLLAEIKERDDRDRNMAVAPLVPAADALVLDSTTLSIEQVIEKALQYARQKLALA
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
sample
used helper phage M13K07 to perform the single mutation
cmk, mssA
562
Escherichia coli
562
Escherichia coli
CJ236
plasmid
pHS210
1
2.39
48.53
VAPOR DIFFUSION, HANGING DROP
7.4
Tris-HCL 50 mM pH 7.4, ammonium sulfate 1.3 M, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
database_2
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Database references
Data collection
1
0
2006-01-10
1
1
2008-05-01
1
2
2011-07-13
1
3
2021-10-20
1
4
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
N
RCSB
Y
RCSB
2005-12-16
REL
REL
n
1
1
A
n
2
2
A
ALA
3
n
3
ALA
3
A
ILE
4
n
4
ILE
4
A
ALA
5
n
5
ALA
5
A
PRO
6
n
6
PRO
6
A
VAL
7
n
7
VAL
7
A
ILE
8
n
8
ILE
8
A
THR
9
n
9
THR
9
A
ILE
10
n
10
ILE
10
A
ASP
11
n
11
ASP
11
A
GLY
12
n
12
GLY
12
A
PRO
13
n
13
PRO
13
A
SER
14
n
14
SER
14
A
GLY
15
n
15
GLY
15
A
ALA
16
n
16
ALA
16
A
GLY
17
n
17
GLY
17
A
LYS
18
n
18
LYS
18
A
GLY
19
n
19
GLY
19
A
THR
20
n
20
THR
20
A
LEU
21
n
21
LEU
21
A
CYS
22
n
22
CYS
22
A
LYS
23
n
23
LYS
23
A
ALA
24
n
24
ALA
24
A
MET
25
n
25
MET
25
A
ALA
26
n
26
ALA
26
A
GLU
27
n
27
GLU
27
A
ALA
28
n
28
ALA
28
A
LEU
29
n
29
LEU
29
A
GLN
30
n
30
GLN
30
A
TRP
31
n
31
TRP
31
A
HIS
32
n
32
HIS
32
A
LEU
33
n
33
LEU
33
A
LEU
34
n
34
LEU
34
A
ASP
35
n
35
ASP
35
A
SER
36
n
36
SER
36
A
GLY
37
n
37
GLY
37
A
ALA
38
n
38
ALA
38
A
ILE
39
n
39
ILE
39
A
TYR
40
n
40
TYR
40
A
ARG
41
n
41
ARG
41
A
VAL
42
n
42
VAL
42
A
LEU
43
n
43
LEU
43
A
ALA
44
n
44
ALA
44
A
LEU
45
n
45
LEU
45
A
ALA
46
n
46
ALA
46
A
ALA
47
n
47
ALA
47
A
LEU
48
n
48
LEU
48
A
HIS
49
n
49
HIS
49
A
HIS
50
n
50
HIS
50
A
HIS
51
n
51
HIS
51
A
VAL
52
n
52
VAL
52
A
ASP
53
n
53
ASP
53
A
VAL
54
n
54
VAL
54
A
ALA
55
n
55
ALA
55
A
SER
56
n
56
SER
56
A
GLU
57
n
57
GLU
57
A
ASP
58
n
58
ASP
58
A
ALA
59
n
59
ALA
59
A
LEU
60
n
60
LEU
60
A
VAL
61
n
61
VAL
61
A
PRO
62
n
62
PRO
62
A
LEU
63
n
63
LEU
63
A
ALA
64
n
64
ALA
64
A
SER
65
n
65
SER
65
A
HIS
66
n
66
HIS
66
A
LEU
67
n
67
LEU
67
A
ASP
68
n
68
ASP
68
A
VAL
69
n
69
VAL
69
A
ARG
70
n
70
ARG
70
A
PHE
71
n
71
PHE
71
A
VAL
72
n
72
VAL
72
A
SER
73
n
73
SER
73
A
THR
74
n
74
THR
74
A
ASN
75
n
75
ASN
75
A
GLY
76
n
76
GLY
76
A
ASN
77
n
77
ASN
77
A
LEU
78
n
78
LEU
78
A
GLU
79
n
79
GLU
79
A
VAL
80
n
80
VAL
80
A
ILE
81
n
81
ILE
81
A
LEU
82
n
82
LEU
82
A
GLU
83
n
83
GLU
83
A
GLY
84
n
84
GLY
84
A
GLU
85
n
85
GLU
85
A
ASP
86
n
86
ASP
86
A
VAL
87
n
87
VAL
87
A
SER
88
n
88
SER
88
A
GLY
89
n
89
GLY
89
A
GLU
90
n
90
GLU
90
A
ILE
91
n
91
ILE
91
A
ARG
92
n
92
ARG
92
A
THR
93
n
93
THR
93
A
GLN
94
n
94
GLN
94
A
GLU
95
n
95
GLU
95
A
VAL
96
n
96
VAL
96
A
ALA
97
n
97
ALA
97
A
ASN
98
n
98
ASN
98
A
ALA
99
n
99
ALA
99
A
ALA
100
n
100
ALA
100
A
SER
101
n
101
SER
101
A
GLN
102
n
102
GLN
102
A
VAL
103
n
103
VAL
103
A
ALA
104
n
104
ALA
104
A
ALA
105
n
105
ALA
105
A
PHE
106
n
106
PHE
106
A
PRO
107
n
107
PRO
107
A
ARG
108
n
108
ARG
108
A
VAL
109
n
109
VAL
109
A
ARG
110
n
110
ARG
110
A
GLU
111
n
111
GLU
111
A
ALA
112
n
112
ALA
112
A
LEU
113
n
113
LEU
113
A
LEU
114
n
114
LEU
114
A
ARG
115
n
115
ARG
115
A
ARG
116
n
116
ARG
116
A
GLN
117
n
117
GLN
117
A
ARG
118
n
118
ARG
118
A
ALA
119
n
119
ALA
119
A
PHE
120
n
120
PHE
120
A
ARG
121
n
121
ARG
121
A
GLU
122
n
122
GLU
122
A
LEU
123
n
123
LEU
123
A
PRO
124
n
124
PRO
124
A
GLY
125
n
125
GLY
125
A
LEU
126
n
126
LEU
126
A
ILE
127
n
127
ILE
127
A
ALA
128
n
128
ALA
128
A
ASP
129
n
129
ASP
129
A
GLY
130
n
130
GLY
130
A
ARG
131
n
131
ARG
131
A
ASP
132
n
132
ASP
132
A
MET
133
n
133
MET
133
A
GLY
134
n
134
GLY
134
A
THR
135
n
135
THR
135
A
VAL
136
n
136
VAL
136
A
VAL
137
n
137
VAL
137
A
PHE
138
n
138
PHE
138
A
PRO
139
n
139
PRO
139
A
ASP
140
n
140
ASP
140
A
ALA
141
n
141
ALA
141
A
PRO
142
n
142
PRO
142
A
VAL
143
n
143
VAL
143
A
LYS
144
n
144
LYS
144
A
ILE
145
n
145
ILE
145
A
PHE
146
n
146
PHE
146
A
LEU
147
n
147
LEU
147
A
ASP
148
n
148
ASP
148
A
ALA
149
n
149
ALA
149
A
SER
150
n
150
SER
150
A
SER
151
n
151
SER
151
A
GLU
152
n
152
GLU
152
A
GLU
153
n
153
GLU
153
A
ARG
154
n
154
ARG
154
A
ALA
155
n
155
ALA
155
A
HIS
156
n
156
HIS
156
A
ARG
157
n
157
ARG
157
A
ARG
158
n
158
ARG
158
A
MET
159
n
159
MET
159
A
LEU
160
n
160
LEU
160
A
GLN
161
n
161
GLN
161
A
LEU
162
n
162
LEU
162
A
GLN
163
n
163
GLN
163
A
GLU
164
n
164
GLU
164
A
LYS
165
n
165
LYS
165
A
GLY
166
n
166
GLY
166
A
PHE
167
n
167
PHE
167
A
SER
168
n
168
SER
168
A
VAL
169
n
169
VAL
169
A
ASN
170
n
170
ASN
170
A
PHE
171
n
171
PHE
171
A
GLU
172
n
172
GLU
172
A
ARG
173
n
173
ARG
173
A
LEU
174
n
174
LEU
174
A
LEU
175
n
175
LEU
175
A
ALA
176
n
176
ALA
176
A
GLU
177
n
177
GLU
177
A
ILE
178
n
178
ILE
178
A
LYS
179
n
179
LYS
179
A
n
180
180
A
n
181
181
A
n
182
182
A
n
183
183
A
n
184
184
A
n
185
185
A
n
186
186
A
n
187
187
A
n
188
188
A
n
189
189
A
n
190
190
A
n
191
191
A
n
192
192
A
LEU
193
n
193
LEU
193
A
VAL
194
n
194
VAL
194
A
PRO
195
n
195
PRO
195
A
ALA
196
n
196
ALA
196
A
ALA
197
n
197
ALA
197
A
ASP
198
n
198
ASP
198
A
ALA
199
n
199
ALA
199
A
LEU
200
n
200
LEU
200
A
VAL
201
n
201
VAL
201
A
LEU
202
n
202
LEU
202
A
ASP
203
n
203
ASP
203
A
SER
204
n
204
SER
204
A
THR
205
n
205
THR
205
A
THR
206
n
206
THR
206
A
LEU
207
n
207
LEU
207
A
SER
208
n
208
SER
208
A
ILE
209
n
209
ILE
209
A
GLU
210
n
210
GLU
210
A
GLN
211
n
211
GLN
211
A
VAL
212
n
212
VAL
212
A
ILE
213
n
213
ILE
213
A
GLU
214
n
214
GLU
214
A
LYS
215
n
215
LYS
215
A
ALA
216
n
216
ALA
216
A
LEU
217
n
217
LEU
217
A
GLN
218
n
218
GLN
218
A
TYR
219
n
219
TYR
219
A
ALA
220
n
220
ALA
220
A
ARG
221
n
221
ARG
221
A
GLN
222
n
222
GLN
222
A
LYS
223
n
223
LYS
223
A
LEU
224
n
224
LEU
224
A
ALA
225
n
225
ALA
225
A
LEU
226
n
226
LEU
226
A
ALA
227
n
227
ALA
227
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
HIS
32
A
N
HIS
32
A
O
ILE
127
A
O
ILE
127
A
O
LEU
126
A
O
LEU
126
A
N
ILE
8
A
N
ILE
8
A
N
ASP
11
A
N
ASP
11
A
O
LEU
147
A
O
LEU
147
A
N
LYS
144
A
N
LYS
144
A
O
LEU
200
A
O
LEU
200
A
N
VAL
72
A
N
VAL
72
A
O
GLU
79
A
O
GLU
79
A
N
LEU
82
A
N
LEU
82
A
O
GLU
85
A
O
GLU
85
1
A
CD
GLU
164
A
CD
GLU
164
1
Y
1
A
OE1
GLU
164
A
OE1
GLU
164
1
Y
1
A
OE2
GLU
164
A
OE2
GLU
164
1
Y
1
A
CG
ARG
173
A
CG
ARG
173
0
Y
1
A
CD
ARG
173
A
CD
ARG
173
0
Y
1
A
NE
ARG
173
A
NE
ARG
173
0
Y
1
A
CZ
ARG
173
A
CZ
ARG
173
0
Y
1
A
NH1
ARG
173
A
NH1
ARG
173
0
Y
1
A
NH2
ARG
173
A
NH2
ARG
173
0
Y
1
A
MET
1
A
MET
1
1
Y
1
A
THR
2
A
THR
2
1
Y
1
A
GLU
180
A
GLU
180
1
Y
1
A
ARG
181
A
ARG
181
1
Y
1
A
ASP
182
A
ASP
182
1
Y
1
A
ASP
183
A
ASP
183
1
Y
1
A
ARG
184
A
ARG
184
1
Y
1
A
ASP
185
A
ASP
185
1
Y
1
A
ARG
186
A
ARG
186
1
Y
1
A
ASN
187
A
ASN
187
1
Y
1
A
MET
188
A
MET
188
1
Y
1
A
ALA
189
A
ALA
189
1
Y
1
A
VAL
190
A
VAL
190
1
Y
1
A
ALA
191
A
ALA
191
1
Y
1
A
PRO
192
A
PRO
192
1
Y
1
A
ILE
4
99.07
-64.52
1
A
ALA
225
-148.33
-125.46
1
A
LEU
226
47.70
159.46
-0.800
-3.149
0.000
-0.800
0.000
1.601
0.242
0.2309
0.231
0.231
1.90
15.
1770
18504
18054
10.5
RANDOM
1
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
Engh & Huber
1.90
15.
0
1614
0
0
1614
0.007
1.27
1.90
15
2FEM
18504
18054
1.0
1
97.9
1.9
2.0
86.1
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
refinement
CNS
1.1
Mutant R188M of the Cytidine Monophosphate Kinase From E. Coli
1
N
N
The biological assembly is a monomer
A
GLY
17
A
GLY
17
HELX_P
A
GLN
30
A
GLN
30
1
1
14
A
SER
36
A
SER
36
HELX_P
A
HIS
51
A
HIS
51
1
2
16
A
SER
56
A
SER
56
HELX_P
A
HIS
66
A
HIS
66
1
3
11
A
GLY
89
A
GLY
89
HELX_P
A
ARG
92
A
ARG
92
5
4
4
A
THR
93
A
THR
93
HELX_P
A
ALA
105
A
ALA
105
1
5
13
A
PHE
106
A
PHE
106
HELX_P
A
ALA
119
A
ALA
119
1
6
14
A
SER
150
A
SER
150
HELX_P
A
LYS
165
A
LYS
165
1
7
16
A
ASN
170
A
ASN
170
HELX_P
A
LYS
179
A
LYS
179
1
8
10
A
SER
208
A
SER
208
HELX_P
A
ALA
225
A
ALA
225
1
9
18
SIGNALING PROTEIN,TRANSFERASE
NUCLEOTIDE MONOPHOSPHATE KINASE; TRANSFERASE, SIGNALING PROTEIN, TRANSFERASE
A
LEU
123
A
LEU
123
1
A
PRO
124
A
PRO
124
-0.11
KCY_ECOLI
UNP
1
1
P0A6I0
MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEV
ILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRML
QLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQYARQKLALA
1
227
2FEM
1
227
P0A6I0
A
1
1
227
1
ARG
engineered mutation
MET
188
2FEM
A
P0A6I0
UNP
188
188
5
3
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
A
HIS
32
A
HIS
32
A
ASP
35
A
ASP
35
A
LEU
126
A
LEU
126
A
GLY
130
A
GLY
130
A
VAL
7
A
VAL
7
A
ASP
11
A
ASP
11
A
VAL
143
A
VAL
143
A
ASP
148
A
ASP
148
A
LEU
200
A
LEU
200
A
ASP
203
A
ASP
203
A
VAL
69
A
VAL
69
A
THR
74
A
THR
74
A
ASN
77
A
ASN
77
A
LEU
82
A
LEU
82
A
GLU
85
A
GLU
85
A
ASP
86
A
ASP
86
173
P 63