0.00579 0.00000 0.00000 0.00000 0.00579 0.00000 0.00000 0.00000 0.00579 0.00000 0.00000 0.00000 Fan, L. Arvai, A.S. Tainer, J.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 48 90.00 90.00 90.00 172.859 172.859 172.859 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C3 H8 O 60.095 ISOPROPYL ALCOHOL 2-PROPANOL non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N C N 170 N C N 171 N C N 172 N O N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N N N 182 S C N 183 N C N 184 N O N 185 N C N 186 N C N 187 N C N 188 N C N 189 N O N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N N N 204 S C N 205 N C N 206 N O N 207 N C N 208 N C N 209 N C N 210 N C N 211 N N N 212 N O N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N N N 229 S C N 230 N C N 231 N O N 232 N C N 233 N C N 234 N S N 235 N C N 236 N O N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N N N 249 S C N 250 N C N 251 N O N 252 N C Y 253 N C Y 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C N 259 N O N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N N N 272 S C N 273 N C N 274 N O N 275 N C N 276 N C N 277 N C N 278 N O N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N N N 289 S C N 290 N C N 291 N O N 292 N C N 293 N O N 294 N O N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N N N 303 S C N 304 N C N 305 N O N 306 R C N 307 N O N 308 N C N 309 N O N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N N N 320 S C N 321 N C N 322 N O N 323 N C Y 324 N C Y 325 N C Y 326 N C Y 327 N N Y 328 N C Y 329 N C Y 330 N C Y 331 N C Y 332 N C N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N N N 347 S C N 348 N C N 349 N O N 350 N C Y 351 N C Y 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C N 357 N O N 358 N O N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N N N 371 S C N 372 N C N 373 N O N 374 N C N 375 N C N 376 N C N 377 N O N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N doub N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N doub N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N doub N 242 N sing N 243 N sing N 244 N sing N 245 N sing Y 246 N doub Y 247 N sing Y 248 N sing N 249 N sing Y 250 N doub N 251 N sing Y 252 N doub N 253 N sing Y 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N doub N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N doub N 311 N sing N 312 N sing N 313 N sing N 314 N sing Y 315 N doub Y 316 N sing Y 317 N sing N 318 N sing Y 319 N doub Y 320 N sing Y 321 N sing N 322 N sing Y 323 N sing Y 324 N doub N 325 N sing Y 326 N doub N 327 N sing Y 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N doub N 339 N sing N 340 N sing N 341 N sing N 342 N sing Y 343 N doub Y 344 N sing Y 345 N sing N 346 N sing Y 347 N doub N 348 N sing Y 349 N doub N 350 N sing Y 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N doub N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing US Mol.Cell MOCEFL 2168 1097-2765 22 27 37 10.1016/j.molcel.2006.02.017 16600867 Conserved XPB Core Structure and Motifs for DNA Unwinding: Implications for Pathway Selection of Transcription or Excision Repair 2006 10.2210/pdb2fzl/pdb pdb_00002fzl 1.00000 0.00000 0.00000 0.00000 1.00000 0.00000 0.00000 0.00000 1.00000 0.00000 0.00000 0.00000 100 1 CCD 2005-10-08 ADSC QUANTUM 315 SINGLE WAVELENGTH M x-ray 1 1.115869 1.0 12.3.1 ALS 1.115869 SYNCHROTRON ALS BEAMLINE 12.3.1 25670.662 DNA repair protein RAD25, XPB residues 237-434 1 man polymer 60.095 ISOPROPYL ALCOHOL 1 syn non-polymer 18.015 water 23 nat water no no MGSSHHHHHHSSGLVPRGSHMKHLAKYTIKRIFVPLAEDERVEYEKREKVYKQFLRARGITLRRAEDFNKIVMASGYDER AYEALRAWEEARRIAFNSKNKIRKLREILERHRKDKIIIFTRHNELVYRISKVFLIPAITHRTSREEREEILEGFRTGRF RAIVSSQVLDEGIDVPDANVGVIMSGSGSAREYIQRLGRILRPSKGKKEAVLYELISRG MGSSHHHHHHSSGLVPRGSHMKHLAKYTIKRIFVPLAEDERVEYEKREKVYKQFLRARGITLRRAEDFNKIVMASGYDER AYEALRAWEEARRIAFNSKNKIRKLREILERHRKDKIIIFTRHNELVYRISKVFLIPAITHRTSREEREEILEGFRTGRF RAIVSSQVLDEGIDVPDANVGVIMSGSGSAREYIQRLGRILRPSKGKKEAVLYELISRG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Archaeoglobus Escherichia Escherichia coli sample 2234 Archaeoglobus fulgidus 469008 Escherichia coli BL21(DE3) BL21(DE3) PLASMID PET-28B 1 4.19 70.65 VAPOR DIFFUSION, HANGING DROP 9.8 Ammonium sulphate, isopropanol, CAPS, pH 9.8, VAPOR DIFFUSION, HANGING DROP, temperature 303K 303 software chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_ref_seq_dif struct_site repository Initial release Version format compliance Version format compliance Refinement description Data collection Database references Derived calculations Refinement description 1 0 2006-04-18 1 1 2008-05-01 1 2 2011-07-13 1 3 2017-10-18 1 4 2023-08-30 _software.classification _software.contact_author _software.contact_author_email _software.date _software.language _software.location _software.name _software.type _software.version _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Crystal structure of full-length Archaeoglobus fulgidus XPB RCSB Y RCSB 2006-02-09 REL REL IPA ISOPROPYL ALCOHOL HOH water 2FWR PDB ENTRY 2FWR PDB experimental model IOH 6001 2 IPA IPA 6001 A WAT 1001 3 HOH HOH 1001 A WAT 1002 3 HOH HOH 1002 A WAT 1003 3 HOH HOH 1003 A WAT 1004 3 HOH HOH 1004 A WAT 1005 3 HOH HOH 1005 A WAT 1006 3 HOH HOH 1006 A WAT 1007 3 HOH HOH 1007 A WAT 1008 3 HOH HOH 1008 A WAT 1009 3 HOH HOH 1009 A WAT 1010 3 HOH HOH 1010 A WAT 1011 3 HOH HOH 1011 A WAT 1012 3 HOH HOH 1012 A WAT 1013 3 HOH HOH 1013 A WAT 1014 3 HOH HOH 1014 A WAT 1015 3 HOH HOH 1015 A WAT 1016 3 HOH HOH 1016 A WAT 1017 3 HOH HOH 1017 A WAT 1018 3 HOH HOH 1018 A WAT 1019 3 HOH HOH 1019 A WAT 1020 3 HOH HOH 1020 A WAT 1021 3 HOH HOH 1021 A WAT 1022 3 HOH HOH 1022 A WAT 1023 3 HOH HOH 1023 A n 1 236 A n 2 237 A n 3 238 A n 4 239 A n 5 240 A n 6 241 A n 7 242 A n 8 243 A n 9 244 A n 10 245 A n 11 246 A n 12 247 A n 13 248 A n 14 249 A n 15 250 A n 16 251 A n 17 252 A n 18 253 A n 19 254 A n 20 255 A n 21 256 A n 22 257 A HIS 258 n 23 HIS 258 A LEU 259 n 24 LEU 259 A ALA 260 n 25 ALA 260 A LYS 261 n 26 LYS 261 A TYR 262 n 27 TYR 262 A THR 263 n 28 THR 263 A ILE 264 n 29 ILE 264 A LYS 265 n 30 LYS 265 A ARG 266 n 31 ARG 266 A ILE 267 n 32 ILE 267 A PHE 268 n 33 PHE 268 A VAL 269 n 34 VAL 269 A PRO 270 n 35 PRO 270 A LEU 271 n 36 LEU 271 A ALA 272 n 37 ALA 272 A GLU 273 n 38 GLU 273 A ASP 274 n 39 ASP 274 A GLU 275 n 40 GLU 275 A ARG 276 n 41 ARG 276 A VAL 277 n 42 VAL 277 A GLU 278 n 43 GLU 278 A TYR 279 n 44 TYR 279 A GLU 280 n 45 GLU 280 A LYS 281 n 46 LYS 281 A ARG 282 n 47 ARG 282 A GLU 283 n 48 GLU 283 A LYS 284 n 49 LYS 284 A VAL 285 n 50 VAL 285 A TYR 286 n 51 TYR 286 A LYS 287 n 52 LYS 287 A GLN 288 n 53 GLN 288 A PHE 289 n 54 PHE 289 A LEU 290 n 55 LEU 290 A ARG 291 n 56 ARG 291 A ALA 292 n 57 ALA 292 A ARG 293 n 58 ARG 293 A GLY 294 n 59 GLY 294 A ILE 295 n 60 ILE 295 A THR 296 n 61 THR 296 A LEU 297 n 62 LEU 297 A ARG 298 n 63 ARG 298 A ARG 299 n 64 ARG 299 A ALA 300 n 65 ALA 300 A GLU 301 n 66 GLU 301 A ASP 302 n 67 ASP 302 A PHE 303 n 68 PHE 303 A ASN 304 n 69 ASN 304 A LYS 305 n 70 LYS 305 A ILE 306 n 71 ILE 306 A VAL 307 n 72 VAL 307 A MET 308 n 73 MET 308 A ALA 309 n 74 ALA 309 A SER 310 n 75 SER 310 A GLY 311 n 76 GLY 311 A TYR 312 n 77 TYR 312 A ASP 313 n 78 ASP 313 A GLU 314 n 79 GLU 314 A ARG 315 n 80 ARG 315 A ALA 316 n 81 ALA 316 A TYR 317 n 82 TYR 317 A GLU 318 n 83 GLU 318 A ALA 319 n 84 ALA 319 A LEU 320 n 85 LEU 320 A ARG 321 n 86 ARG 321 A ALA 322 n 87 ALA 322 A TRP 323 n 88 TRP 323 A GLU 324 n 89 GLU 324 A GLU 325 n 90 GLU 325 A ALA 326 n 91 ALA 326 A ARG 327 n 92 ARG 327 A ARG 328 n 93 ARG 328 A ILE 329 n 94 ILE 329 A ALA 330 n 95 ALA 330 A PHE 331 n 96 PHE 331 A ASN 332 n 97 ASN 332 A SER 333 n 98 SER 333 A LYS 334 n 99 LYS 334 A ASN 335 n 100 ASN 335 A LYS 336 n 101 LYS 336 A ILE 337 n 102 ILE 337 A ARG 338 n 103 ARG 338 A LYS 339 n 104 LYS 339 A LEU 340 n 105 LEU 340 A ARG 341 n 106 ARG 341 A GLU 342 n 107 GLU 342 A ILE 343 n 108 ILE 343 A LEU 344 n 109 LEU 344 A GLU 345 n 110 GLU 345 A ARG 346 n 111 ARG 346 A HIS 347 n 112 HIS 347 A ARG 348 n 113 ARG 348 A LYS 349 n 114 LYS 349 A ASP 350 n 115 ASP 350 A LYS 351 n 116 LYS 351 A ILE 352 n 117 ILE 352 A ILE 353 n 118 ILE 353 A ILE 354 n 119 ILE 354 A PHE 355 n 120 PHE 355 A THR 356 n 121 THR 356 A ARG 357 n 122 ARG 357 A HIS 358 n 123 HIS 358 A ASN 359 n 124 ASN 359 A GLU 360 n 125 GLU 360 A LEU 361 n 126 LEU 361 A VAL 362 n 127 VAL 362 A TYR 363 n 128 TYR 363 A ARG 364 n 129 ARG 364 A ILE 365 n 130 ILE 365 A SER 366 n 131 SER 366 A LYS 367 n 132 LYS 367 A VAL 368 n 133 VAL 368 A PHE 369 n 134 PHE 369 A LEU 370 n 135 LEU 370 A ILE 371 n 136 ILE 371 A PRO 372 n 137 PRO 372 A ALA 373 n 138 ALA 373 A ILE 374 n 139 ILE 374 A THR 375 n 140 THR 375 A HIS 376 n 141 HIS 376 A ARG 377 n 142 ARG 377 A THR 378 n 143 THR 378 A SER 379 n 144 SER 379 A ARG 380 n 145 ARG 380 A GLU 381 n 146 GLU 381 A GLU 382 n 147 GLU 382 A ARG 383 n 148 ARG 383 A GLU 384 n 149 GLU 384 A GLU 385 n 150 GLU 385 A ILE 386 n 151 ILE 386 A LEU 387 n 152 LEU 387 A GLU 388 n 153 GLU 388 A GLY 389 n 154 GLY 389 A PHE 390 n 155 PHE 390 A ARG 391 n 156 ARG 391 A THR 392 n 157 THR 392 A GLY 393 n 158 GLY 393 A ARG 394 n 159 ARG 394 A PHE 395 n 160 PHE 395 A ARG 396 n 161 ARG 396 A ALA 397 n 162 ALA 397 A ILE 398 n 163 ILE 398 A VAL 399 n 164 VAL 399 A SER 400 n 165 SER 400 A SER 401 n 166 SER 401 A GLN 402 n 167 GLN 402 A VAL 403 n 168 VAL 403 A LEU 404 n 169 LEU 404 A ASP 405 n 170 ASP 405 A GLU 406 n 171 GLU 406 A GLY 407 n 172 GLY 407 A ILE 408 n 173 ILE 408 A ASP 409 n 174 ASP 409 A VAL 410 n 175 VAL 410 A PRO 411 n 176 PRO 411 A ASP 412 n 177 ASP 412 A ALA 413 n 178 ALA 413 A ASN 414 n 179 ASN 414 A VAL 415 n 180 VAL 415 A GLY 416 n 181 GLY 416 A VAL 417 n 182 VAL 417 A ILE 418 n 183 ILE 418 A MET 419 n 184 MET 419 A SER 420 n 185 SER 420 A GLY 421 n 186 GLY 421 A SER 422 n 187 SER 422 A GLY 423 n 188 GLY 423 A SER 424 n 189 SER 424 A ALA 425 n 190 ALA 425 A ARG 426 n 191 ARG 426 A GLU 427 n 192 GLU 427 A TYR 428 n 193 TYR 428 A ILE 429 n 194 ILE 429 A GLN 430 n 195 GLN 430 A ARG 431 n 196 ARG 431 A LEU 432 n 197 LEU 432 A GLY 433 n 198 GLY 433 A ARG 434 n 199 ARG 434 A ILE 435 n 200 ILE 435 A LEU 436 n 201 LEU 436 A ARG 437 n 202 ARG 437 A PRO 438 n 203 PRO 438 A SER 439 n 204 SER 439 A LYS 440 n 205 LYS 440 A GLY 441 n 206 GLY 441 A LYS 442 n 207 LYS 442 A LYS 443 n 208 LYS 443 A GLU 444 n 209 GLU 444 A ALA 445 n 210 ALA 445 A VAL 446 n 211 VAL 446 A LEU 447 n 212 LEU 447 A TYR 448 n 213 TYR 448 A GLU 449 n 214 GLU 449 A LEU 450 n 215 LEU 450 A ILE 451 n 216 ILE 451 A SER 452 n 217 SER 452 A ARG 453 n 218 ARG 453 A GLY 454 n 219 GLY 454 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LYS 265 A N LYS 30 A O LEU 447 A O LEU 212 A O TYR 448 A O TYR 213 A N GLY 416 A N GLY 181 A O VAL 417 A O VAL 182 A N PHE 355 A N PHE 120 A N ILE 354 A N ILE 119 A O ILE 398 A O ILE 163 A O VAL 399 A O VAL 164 A N ILE 374 A N ILE 139 1 A MET 236 A MET 1 1 Y 1 A GLY 237 A GLY 2 1 Y 1 A SER 238 A SER 3 1 Y 1 A SER 239 A SER 4 1 Y 1 A HIS 240 A HIS 5 1 Y 1 A HIS 241 A HIS 6 1 Y 1 A HIS 242 A HIS 7 1 Y 1 A HIS 243 A HIS 8 1 Y 1 A HIS 244 A HIS 9 1 Y 1 A HIS 245 A HIS 10 1 Y 1 A SER 246 A SER 11 1 Y 1 A SER 247 A SER 12 1 Y 1 A GLY 248 A GLY 13 1 Y 1 A LEU 249 A LEU 14 1 Y 1 A VAL 250 A VAL 15 1 Y 1 A PRO 251 A PRO 16 1 Y 1 A ARG 252 A ARG 17 1 Y 1 A GLY 253 A GLY 18 1 Y 1 A SER 254 A SER 19 1 Y 1 A HIS 255 A HIS 20 1 Y 1 A MET 256 A MET 21 1 Y 1 A LYS 257 A LYS 22 1 Y 1 A ALA 260 -141.05 -5.17 1 A LYS 261 -160.24 67.38 1 A GLU 273 -58.38 -71.54 1 A GLU 301 53.05 -33.18 1 A LEU 370 -61.22 62.48 1 A THR 375 -123.47 -169.41 1 A HIS 376 -90.43 54.24 1 A ARG 377 -156.87 -99.73 1 A THR 378 38.24 -89.60 1 A SER 379 168.62 -155.35 1 A ARG 383 -45.08 -71.21 1 A ARG 391 -67.14 1.20 1 A ARG 394 64.62 -71.90 1 A VAL 410 56.25 128.40 1 A SER 439 -51.99 170.52 1 A LYS 442 76.48 -44.97 1 A ALA 445 -177.76 148.56 1 A ARG 453 -168.91 -108.86 protein_rep.param protein.top water.param water.top ion.param ion.top ioh.par ioh.top 73.500 0.000 0.000 0.000 0.000 0.000 0.000 0.291 0.013 0.249 0.2481 0.2481 2.9 50.0 490 9267 9267 5.300 92.400 RANDOM 77348.844 0.000 1 RESTRAINED THROUGHOUT 0.00 MOLECULAR REPLACEMENT PDB ENTRY 2FWR Engh & Huber FLAT MODEL 55.347 0.355 0.530 0.390 5.000 0.750 0.520 2.9 50.0 27 1665 0 0 1638 0.009 1.400 21.200 0.710 1.500 1.500 2.750 2.000 2.020 2.000 3.500 2.500 0.435 0.050 0.36 3.080 77 1327 1404 6 5.500 86.600 2.900 50.000 2FZL 10024 10024 -3 -3 0.068 0.890 1 55.18 25.500 100.000 0.629 2.90 3.00 5.06 978 0.537 25.60 100.0 100.00 data reduction Zbyszek Otwinowski zbyszek@mix.swmed.edu http://www.lnls.br/infra/linhasluz/denzo-hkl.htm DENZO package data scaling Zbyszek Otwinowski zbyszek@mix.swmed.edu http://www.lnls.br/infra/linhasluz/denzo-hkl.htm SCALEPACK package refinement Axel T. Brunger axel.brunger@yale.edu Fortran_77 http://cns.csb.yale.edu/v1.1/ CNS package 1.1 data extraction PDB sw-help@rcsb.rutgers.edu Nov. 1, 2005 C++ http://pdb.rutgers.edu/software/ PDB_EXTRACT package 1.701 data collection Blu-Ice phasing AMoRE Structure of C-terminal domain of Archaeoglobus fulgidus XPB 1 N N 2 N N 3 N N A ALA 272 A ALA 37 HELX_P A ARG 293 A ARG 58 1 1 22 A THR 296 A THR 61 HELX_P A ALA 300 A ALA 65 5 2 5 A GLU 301 A GLU 66 HELX_P A SER 310 A SER 75 1 3 10 A ASP 313 A ASP 78 HELX_P A ASN 332 A ASN 97 1 4 20 A SER 333 A SER 98 HELX_P A HIS 347 A HIS 112 1 5 15 A HIS 358 A HIS 123 HELX_P A PHE 369 A PHE 134 1 6 12 A ARG 380 A ARG 145 HELX_P A ARG 391 A ARG 156 1 7 12 A ALA 425 A ALA 190 HELX_P A LEU 436 A LEU 201 1 8 12 DNA BINDING PROTEIN XPB, nucleotide excision repair, dna repair, DNA BINDING PROTEIN O29889_ARCFU UNP 1 237 O29889 237 434 2FZL 257 454 O29889 A 1 22 219 1 initiating methionine MET 236 2FZL A O29889 UNP 1 1 cloning artifact GLY 237 2FZL A O29889 UNP 2 1 cloning artifact SER 238 2FZL A O29889 UNP 3 1 cloning artifact SER 239 2FZL A O29889 UNP 4 1 expression tag HIS 240 2FZL A O29889 UNP 5 1 expression tag HIS 241 2FZL A O29889 UNP 6 1 expression tag HIS 242 2FZL A O29889 UNP 7 1 expression tag HIS 243 2FZL A O29889 UNP 8 1 expression tag HIS 244 2FZL A O29889 UNP 9 1 expression tag HIS 245 2FZL A O29889 UNP 10 1 cloning artifact SER 246 2FZL A O29889 UNP 11 1 cloning artifact SER 247 2FZL A O29889 UNP 12 1 cloning artifact GLY 248 2FZL A O29889 UNP 13 1 cloning artifact LEU 249 2FZL A O29889 UNP 14 1 cloning artifact VAL 250 2FZL A O29889 UNP 15 1 cloning artifact PRO 251 2FZL A O29889 UNP 16 1 cloning artifact ARG 252 2FZL A O29889 UNP 17 1 cloning artifact GLY 253 2FZL A O29889 UNP 18 1 cloning artifact SER 254 2FZL A O29889 UNP 19 1 cloning artifact HIS 255 2FZL A O29889 UNP 20 1 cloning artifact MET 256 2FZL A O29889 UNP 21 6 parallel parallel parallel parallel parallel A LYS 261 A LYS 26 A PRO 270 A PRO 35 A GLU 444 A GLU 209 A ARG 453 A ARG 218 A VAL 415 A VAL 180 A MET 419 A MET 184 A ILE 352 A ILE 117 A PHE 355 A PHE 120 A ALA 397 A ALA 162 A SER 400 A SER 165 A ALA 373 A ALA 138 A ILE 374 A ILE 139 BINDING SITE FOR RESIDUE IPA A 6001 A IPA 6001 Software 3 A TYR 279 A TYR 44 3 1_555 A TRP 323 A TRP 88 3 1_555 A ARG 327 A ARG 92 3 1_555 214 I 41 3 2