1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Zhang, L.
Wang, Y.
Picking, W.L.
Picking, W.D.
De Guzman, R.N.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
359
322
330
10.1016/j.jmb.2006.03.028
16631790
Solution Structure of Monomeric BsaL, the Type III Secretion Needle Protein of Burkholderia pseudomallei.
2006
10.2210/pdb2g0u/pdb
pdb_00002g0u
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
10368.455
type III secretion system needle protein
BsaLdelta5
1
man
polymer
no
no
MSNPPTPLLADYEWSGYLTGIGRAFDDGVKDLNKQLQDAQANLTKNPSDPTALANYQMIMSEYNLYRNAQSSAVKSMKDI
DSSILEHHHHHH
MSNPPTPLLADYEWSGYLTGIGRAFDDGVKDLNKQLQDAQANLTKNPSDPTALANYQMIMSEYNLYRNAQSSAVKSMKDI
DSSILEHHHHHH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Burkholderia
E264
Escherichia
sample
28450
Burkholderia pseudomallei
562
Escherichia coli
database_2
pdbx_nmr_software
pdbx_nmr_spectrometer
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2006-05-23
1
1
2008-05-01
1
2
2011-07-13
1
3
2022-03-09
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
_struct_ref_seq_dif.details
RCSB
Y
RCSB
2006-02-13
REL
REL
structures with the least restraint violations,structures with the lowest energy
200
20
3D_15N-separated_NOESY
3D_13C-separated_NOESY
20mM
7.0
ambient
298
K
torsion angle dynamics
simulated annealing
molecular dynamics
1
lowest energy
Delaglio, F., Grzesiek, S., Vuister, G.W., Zhu, G., Pfeifer, J., and Bax, A.
processing
NMRPipe
2005
Johnson, B.A.
data analysis
NMRView
5.0.2
Guntert, P.
refinement
CYANA
Case, D.A., Pearlman, D.A., Caldwell, J.W., Cheatham III, T.E., Wang, J., Ross, W.S., Simmerling, C.L., Darden, T.A., Merz, K.M., Stanton, R.V., Cheng, A.L., Vincent, J.J., Crowley, M., Tsui, V., Gohlke, H., Radmer, R.J., Duan, Y., Pitera, J., Massova, I., Seibel, G.L., Singh, U.C., Weiner, P.K., and Kollman, P.A.
refinement
Amber
7
800
Bruker
AVANCE
600
Varian
INOVA
MET
1
n
1
MET
1
A
SER
2
n
2
SER
2
A
ASN
3
n
3
ASN
3
A
PRO
4
n
4
PRO
4
A
PRO
5
n
5
PRO
5
A
THR
6
n
6
THR
6
A
PRO
7
n
7
PRO
7
A
LEU
8
n
8
LEU
8
A
LEU
9
n
9
LEU
9
A
ALA
10
n
10
ALA
10
A
ASP
11
n
11
ASP
11
A
TYR
12
n
12
TYR
12
A
GLU
13
n
13
GLU
13
A
TRP
14
n
14
TRP
14
A
SER
15
n
15
SER
15
A
GLY
16
n
16
GLY
16
A
TYR
17
n
17
TYR
17
A
LEU
18
n
18
LEU
18
A
THR
19
n
19
THR
19
A
GLY
20
n
20
GLY
20
A
ILE
21
n
21
ILE
21
A
GLY
22
n
22
GLY
22
A
ARG
23
n
23
ARG
23
A
ALA
24
n
24
ALA
24
A
PHE
25
n
25
PHE
25
A
ASP
26
n
26
ASP
26
A
ASP
27
n
27
ASP
27
A
GLY
28
n
28
GLY
28
A
VAL
29
n
29
VAL
29
A
LYS
30
n
30
LYS
30
A
ASP
31
n
31
ASP
31
A
LEU
32
n
32
LEU
32
A
ASN
33
n
33
ASN
33
A
LYS
34
n
34
LYS
34
A
GLN
35
n
35
GLN
35
A
LEU
36
n
36
LEU
36
A
GLN
37
n
37
GLN
37
A
ASP
38
n
38
ASP
38
A
ALA
39
n
39
ALA
39
A
GLN
40
n
40
GLN
40
A
ALA
41
n
41
ALA
41
A
ASN
42
n
42
ASN
42
A
LEU
43
n
43
LEU
43
A
THR
44
n
44
THR
44
A
LYS
45
n
45
LYS
45
A
ASN
46
n
46
ASN
46
A
PRO
47
n
47
PRO
47
A
SER
48
n
48
SER
48
A
ASP
49
n
49
ASP
49
A
PRO
50
n
50
PRO
50
A
THR
51
n
51
THR
51
A
ALA
52
n
52
ALA
52
A
LEU
53
n
53
LEU
53
A
ALA
54
n
54
ALA
54
A
ASN
55
n
55
ASN
55
A
TYR
56
n
56
TYR
56
A
GLN
57
n
57
GLN
57
A
MET
58
n
58
MET
58
A
ILE
59
n
59
ILE
59
A
MET
60
n
60
MET
60
A
SER
61
n
61
SER
61
A
GLU
62
n
62
GLU
62
A
TYR
63
n
63
TYR
63
A
ASN
64
n
64
ASN
64
A
LEU
65
n
65
LEU
65
A
TYR
66
n
66
TYR
66
A
ARG
67
n
67
ARG
67
A
ASN
68
n
68
ASN
68
A
ALA
69
n
69
ALA
69
A
GLN
70
n
70
GLN
70
A
SER
71
n
71
SER
71
A
SER
72
n
72
SER
72
A
ALA
73
n
73
ALA
73
A
VAL
74
n
74
VAL
74
A
LYS
75
n
75
LYS
75
A
SER
76
n
76
SER
76
A
MET
77
n
77
MET
77
A
LYS
78
n
78
LYS
78
A
ASP
79
n
79
ASP
79
A
ILE
80
n
80
ILE
80
A
ASP
81
n
81
ASP
81
A
SER
82
n
82
SER
82
A
SER
83
n
83
SER
83
A
ILE
84
n
84
ILE
84
A
LEU
85
n
85
LEU
85
A
GLU
86
n
86
GLU
86
A
HIS
87
n
87
HIS
87
A
HIS
88
n
88
HIS
88
A
HIS
89
n
89
HIS
89
A
HIS
90
n
90
HIS
90
A
HIS
91
n
91
HIS
91
A
HIS
92
n
92
HIS
92
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
TYR
56
0.100
SIDE CHAIN
2
A
TYR
56
0.088
SIDE CHAIN
3
A
TYR
56
0.101
SIDE CHAIN
4
A
TYR
56
0.084
SIDE CHAIN
4
A
TYR
63
0.063
SIDE CHAIN
5
A
TYR
56
0.087
SIDE CHAIN
6
A
TYR
56
0.099
SIDE CHAIN
7
A
TYR
56
0.099
SIDE CHAIN
8
A
TYR
56
0.072
SIDE CHAIN
9
A
TYR
56
0.079
SIDE CHAIN
10
A
TYR
56
0.076
SIDE CHAIN
11
A
TYR
56
0.089
SIDE CHAIN
12
A
TYR
56
0.078
SIDE CHAIN
13
A
TYR
56
0.070
SIDE CHAIN
14
A
TYR
56
0.080
SIDE CHAIN
15
A
TYR
56
0.078
SIDE CHAIN
16
A
TYR
56
0.097
SIDE CHAIN
17
A
TYR
56
0.080
SIDE CHAIN
18
A
TYR
56
0.082
SIDE CHAIN
19
A
TYR
56
0.093
SIDE CHAIN
20
A
TYR
56
0.099
SIDE CHAIN
3
3.24
0.50
120.30
123.54
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
23
23
23
N
4
3.66
0.50
120.30
123.96
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
23
23
23
N
10
3.44
0.50
120.30
123.74
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
23
23
23
N
11
3.48
0.50
120.30
123.78
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
23
23
23
N
17
3.05
0.50
120.30
123.35
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
23
23
23
N
18
3.18
0.50
120.30
123.48
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
23
23
23
N
1
A
LEU
8
-144.85
14.22
1
A
ALA
10
-141.43
28.75
1
A
GLU
13
-159.65
-40.90
1
A
ASP
26
-144.09
18.16
1
A
ASN
46
-152.71
86.80
1
A
HIS
90
-136.24
-50.10
2
A
TYR
12
-61.15
13.44
2
A
THR
19
-165.46
-164.42
2
A
ALA
24
-141.21
-44.02
2
A
LEU
85
-76.72
37.76
2
A
HIS
88
-68.44
23.75
3
A
PRO
5
-48.59
157.18
3
A
ASP
26
-67.98
2.93
3
A
ASN
46
-151.23
89.89
3
A
SER
83
-140.78
-8.71
5
A
LEU
9
-66.52
14.35
5
A
ASP
26
-139.73
-43.61
5
A
ASN
46
-151.24
86.49
6
A
TRP
14
-66.09
28.55
6
A
VAL
29
-146.62
-47.33
6
A
ILE
84
-145.18
-11.91
7
A
TRP
14
-66.09
28.55
7
A
VAL
29
-146.62
-47.33
7
A
ILE
84
-145.18
-11.91
8
A
ALA
10
-154.25
-6.28
8
A
SER
15
-57.11
109.92
8
A
THR
19
-148.68
29.52
8
A
ILE
21
0.01
71.01
9
A
LEU
9
-144.56
-2.39
9
A
ARG
23
-145.78
-20.59
9
A
SER
76
-140.74
19.55
9
A
SER
83
-142.50
-1.94
9
A
HIS
91
-147.58
-3.86
10
A
GLU
13
-154.00
-41.59
10
A
ASN
46
-151.25
89.89
11
A
HIS
87
-150.81
-49.39
11
A
HIS
91
-150.19
10.74
12
A
PRO
7
-52.08
108.37
12
A
TYR
12
-55.18
-7.93
12
A
TRP
14
-151.34
-24.63
12
A
ILE
21
-25.73
118.50
13
A
THR
6
66.76
151.93
13
A
ASP
11
-159.08
-44.77
13
A
SER
83
-152.12
31.09
13
A
HIS
89
-73.64
39.51
14
A
GLU
13
-142.51
-4.36
14
A
ASN
46
-151.77
87.77
14
A
ILE
84
-77.72
42.22
15
A
PRO
7
-58.74
-4.29
15
A
ALA
10
-144.45
22.92
15
A
GLU
13
-77.07
47.49
15
A
HIS
90
-57.30
-8.03
16
A
SER
2
-157.70
-42.25
16
A
TYR
12
-139.51
-31.86
18
A
TRP
14
-140.24
16.87
18
A
SER
15
-68.41
47.91
18
A
ASP
26
-131.59
-64.59
18
A
SER
82
-59.82
-8.05
18
A
HIS
87
-71.29
30.72
19
A
PRO
5
-58.63
172.76
19
A
THR
19
-0.03
-53.17
19
A
ASP
26
-143.84
-9.73
20
A
TYR
12
-142.02
28.46
Solution Structure of Monomeric BsaL, the Type III Secretion Needle Protein of Burkholderia pseudomallei
1
N
N
A
SER
15
A
SER
15
HELX_P
A
ARG
23
A
ARG
23
1
1
9
A
ALA
24
A
ALA
24
HELX_P
A
ASP
26
A
ASP
26
5
2
3
A
VAL
29
A
VAL
29
HELX_P
A
ASN
46
A
ASN
46
1
3
18
A
ASP
49
A
ASP
49
HELX_P
A
SER
76
A
SER
76
1
4
28
A
SER
76
A
SER
76
HELX_P
A
ASP
81
A
ASP
81
1
5
6
UNKNOWN FUNCTION
helix-turn-helix, UNKNOWN FUNCTION
Q63K18_BURPS
UNP
1
1
Q63K18
1
84
2G0U
1
84
Q63K18
A
1
1
84
1
THR
conflict
ALA
10
2G0U
A
Q63K18
UNP
10
10
1
THR
conflict
ASP
27
2G0U
A
Q63K18
UNP
27
27
1
GLN
conflict
LYS
34
2G0U
A
Q63K18
UNP
34
34
1
expression tag
LEU
85
2G0U
A
Q63K18
UNP
85
1
expression tag
GLU
86
2G0U
A
Q63K18
UNP
86
1
expression tag
HIS
87
2G0U
A
Q63K18
UNP
87
1
expression tag
HIS
88
2G0U
A
Q63K18
UNP
88
1
expression tag
HIS
89
2G0U
A
Q63K18
UNP
89
1
expression tag
HIS
90
2G0U
A
Q63K18
UNP
90
1
expression tag
HIS
91
2G0U
A
Q63K18
UNP
91
1
expression tag
HIS
92
2G0U
A
Q63K18
UNP
92