0.00814 0.00000 0.00000 0.00000 0.00655 0.00000 0.00000 0.00000 0.01884 0.00000 0.00000 0.00000 Joint Center for Structural Genomics (JCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.000 90.000 90.000 122.890 152.730 53.070 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking Fe4 S4 351.640 IRON/SULFUR CLUSTER non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N FE N 305 N FE N 306 N FE N 307 N FE N 308 N S N 309 N S N 310 N S N 311 N S N 312 N N N 313 S C N 314 N C N 315 N O N 316 R C N 317 N O N 318 N C N 319 N O N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N N N 330 S C N 331 N C N 332 N O N 333 N C Y 334 N C Y 335 N C Y 336 N C Y 337 N N Y 338 N C Y 339 N C Y 340 N C Y 341 N C Y 342 N C N 343 N O N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N N N 357 S C N 358 N C N 359 N O N 360 N C Y 361 N C Y 362 N C Y 363 N C Y 364 N C Y 365 N C Y 366 N C N 367 N O N 368 N O N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N N N 381 S C N 382 N C N 383 N O N 384 N C N 385 N C N 386 N C N 387 N O N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N doub N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N doub N 325 N sing N 326 N sing N 327 N sing N 328 N sing Y 329 N doub Y 330 N sing Y 331 N sing N 332 N sing Y 333 N doub Y 334 N sing Y 335 N sing N 336 N sing Y 337 N sing Y 338 N doub N 339 N sing Y 340 N doub N 341 N sing Y 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N doub N 353 N sing N 354 N sing N 355 N sing N 356 N sing Y 357 N doub Y 358 N sing Y 359 N sing N 360 N sing Y 361 N doub N 362 N sing Y 363 N doub N 364 N sing Y 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N doub N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing DK Acta Crystallogr.,Sect.F 1744-3091 66 1326 1334 10.1107/S1744309110037619 20944229 Structure of a tryptophanyl-tRNA synthetase containing an iron-sulfur cluster. 2010 10.2210/pdb2g36/pdb pdb_00002g36 100 1 CCD 2005-12-15 ADSC QUANTUM 315 Double Crystal Si(111) SINGLE WAVELENGTH M x-ray 1 1.00 1.0 8.2.2 ALS 1.00 SYNCHROTRON ALS BEAMLINE 8.2.2 39284.184 Tryptophanyl-tRNA synthetase 6.1.1.2 1 man polymer 351.640 IRON/SULFUR CLUSTER 1 syn non-polymer 204.225 TRYPTOPHAN 1 syn non-polymer 18.015 water 56 nat water Tryptophan-tRNA ligase, TrpRS no no MGSDKIHHHHHHMRILSGMRPTGKLHIGHLVGALENWVKLQEEGNECFYFVADWHALTTHYDDVSKLKEYTRDLVRGFLA CGIDPEKSVIFVQSGVKEHAELALLFSMIVSVSRLERVPTYKEIKSELNYKDLSTAGFLIYPVLQAADILIYKAEGVPVG EDQVYHIELTREIARRFNYLYDEVFPEPEAILSRVPKLPGTDGRKMSKSYGNIINLEISEKELEQTILRMMTDPARVRRS DPGNPENCPVWKYHQAFDISEEESKWVWEGCTTASIGCVDCKKLLLKNMKRKLAPIWENFRKIDEDPHYVDDVIMEGTKK AREVAAKTMEEVRRAMNLMF MGSDKIHHHHHHMRILSGMRPTGKLHIGHLVGALENWVKLQEEGNECFYFVADWHALTTHYDDVSKLKEYTRDLVRGFLA CGIDPEKSVIFVQSGVKEHAELALLFSMIVSVSRLERVPTYKEIKSELNYKDLSTAGFLIYPVLQAADILIYKAEGVPVG EDQVYHIELTREIARRFNYLYDEVFPEPEAILSRVPKLPGTDGRKMSKSYGNIINLEISEKELEQTILRMMTDPARVRRS DPGNPENCPVWKYHQAFDISEEESKWVWEGCTTASIGCVDCKKLLLKNMKRKLAPIWENFRKIDEDPHYVDDVIMEGTKK AREVAAKTMEEVRRAMNLMF A 282365 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Thermotoga Escherichia sample trpS 2336 Thermotoga maritima 562 Escherichia coli Plasmid 1 3.37 63.17 VAPOR DIFFUSION,SITTING DROP,NANODROP 6.5 12.5% PEG-3000, 0.25M MgCl2, 0.1M Cacodylate pH 6.5, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K 277 Joint Center for Structural Genomics JCSG PSI, Protein Structure Initiative pdbx_struct_assembly_auth_evidence database_2 pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Advisory Derived calculations Version format compliance Author supporting evidence Database references Derived calculations Data collection Refinement description 1 0 2006-03-28 1 1 2008-05-01 1 2 2011-07-13 1 3 2017-10-25 1 4 2023-01-25 1 5 2024-04-03 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 1 CHAIN(S). SEE REMARK 350 FOR INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS A BIOLOGICALLY SIGNIFICANT OLIGIMERIZATION STATE. Y RCSB Y RCSB 2006-02-17 REL REL SF4 IRON/SULFUR CLUSTER TRP TRYPTOPHAN HOH water 1YI8 1yi8B PDB experimental model FS4 400 2 SF4 SF4 400 A TRP 1 3 TRP TRP 401 A HOH 2 4 HOH HOH 402 A HOH 3 4 HOH HOH 403 A HOH 4 4 HOH HOH 404 A HOH 5 4 HOH HOH 405 A HOH 6 4 HOH HOH 406 A HOH 7 4 HOH HOH 407 A HOH 8 4 HOH HOH 408 A HOH 9 4 HOH HOH 409 A HOH 10 4 HOH HOH 410 A HOH 11 4 HOH HOH 411 A HOH 12 4 HOH HOH 412 A HOH 13 4 HOH HOH 413 A HOH 14 4 HOH HOH 414 A HOH 15 4 HOH HOH 415 A HOH 16 4 HOH HOH 416 A HOH 17 4 HOH HOH 417 A HOH 18 4 HOH HOH 418 A HOH 19 4 HOH HOH 419 A HOH 20 4 HOH HOH 420 A HOH 21 4 HOH HOH 421 A HOH 22 4 HOH HOH 422 A HOH 23 4 HOH HOH 423 A HOH 24 4 HOH HOH 424 A HOH 25 4 HOH HOH 425 A HOH 26 4 HOH HOH 426 A HOH 27 4 HOH HOH 427 A HOH 28 4 HOH HOH 428 A HOH 29 4 HOH HOH 429 A HOH 30 4 HOH HOH 430 A HOH 31 4 HOH HOH 431 A HOH 32 4 HOH HOH 432 A HOH 33 4 HOH HOH 433 A HOH 34 4 HOH HOH 434 A HOH 35 4 HOH HOH 435 A HOH 36 4 HOH HOH 436 A HOH 37 4 HOH HOH 437 A HOH 38 4 HOH HOH 438 A HOH 39 4 HOH HOH 439 A HOH 40 4 HOH HOH 440 A HOH 41 4 HOH HOH 441 A HOH 42 4 HOH HOH 442 A HOH 43 4 HOH HOH 443 A HOH 44 4 HOH HOH 444 A HOH 45 4 HOH HOH 445 A HOH 46 4 HOH HOH 446 A HOH 47 4 HOH HOH 447 A HOH 48 4 HOH HOH 448 A HOH 49 4 HOH HOH 449 A HOH 50 4 HOH HOH 450 A HOH 51 4 HOH HOH 451 A HOH 52 4 HOH HOH 452 A HOH 53 4 HOH HOH 453 A HOH 54 4 HOH HOH 454 A HOH 55 4 HOH HOH 455 A HOH 56 4 HOH HOH 456 A HOH 57 4 HOH HOH 457 A n 1 -11 A n 2 -10 A n 3 -9 A n 4 -8 A n 5 -7 A n 6 -6 A n 7 -5 A n 8 -4 A n 9 -3 A n 10 -2 A n 11 -1 A HIS 0 n 12 HIS 0 A MET 1 n 13 MET 1 A ARG 2 n 14 ARG 2 A ILE 3 n 15 ILE 3 A LEU 4 n 16 LEU 4 A SER 5 n 17 SER 5 A GLY 6 n 18 GLY 6 A MET 7 n 19 MET 7 A ARG 8 n 20 ARG 8 A PRO 9 n 21 PRO 9 A THR 10 n 22 THR 10 A GLY 11 n 23 GLY 11 A LYS 12 n 24 LYS 12 A LEU 13 n 25 LEU 13 A HIS 14 n 26 HIS 14 A ILE 15 n 27 ILE 15 A GLY 16 n 28 GLY 16 A HIS 17 n 29 HIS 17 A LEU 18 n 30 LEU 18 A VAL 19 n 31 VAL 19 A GLY 20 n 32 GLY 20 A ALA 21 n 33 ALA 21 A LEU 22 n 34 LEU 22 A GLU 23 n 35 GLU 23 A ASN 24 n 36 ASN 24 A TRP 25 n 37 TRP 25 A VAL 26 n 38 VAL 26 A LYS 27 n 39 LYS 27 A LEU 28 n 40 LEU 28 A GLN 29 n 41 GLN 29 A GLU 30 n 42 GLU 30 A GLU 31 n 43 GLU 31 A GLY 32 n 44 GLY 32 A ASN 33 n 45 ASN 33 A GLU 34 n 46 GLU 34 A CYS 35 n 47 CYS 35 A PHE 36 n 48 PHE 36 A TYR 37 n 49 TYR 37 A PHE 38 n 50 PHE 38 A VAL 39 n 51 VAL 39 A ALA 40 n 52 ALA 40 A ASP 41 n 53 ASP 41 A TRP 42 n 54 TRP 42 A HIS 43 n 55 HIS 43 A ALA 44 n 56 ALA 44 A LEU 45 n 57 LEU 45 A THR 46 n 58 THR 46 A THR 47 n 59 THR 47 A HIS 48 n 60 HIS 48 A TYR 49 n 61 TYR 49 A ASP 50 n 62 ASP 50 A ASP 51 n 63 ASP 51 A VAL 52 n 64 VAL 52 A SER 53 n 65 SER 53 A LYS 54 n 66 LYS 54 A LEU 55 n 67 LEU 55 A LYS 56 n 68 LYS 56 A GLU 57 n 69 GLU 57 A TYR 58 n 70 TYR 58 A THR 59 n 71 THR 59 A ARG 60 n 72 ARG 60 A ASP 61 n 73 ASP 61 A LEU 62 n 74 LEU 62 A VAL 63 n 75 VAL 63 A ARG 64 n 76 ARG 64 A GLY 65 n 77 GLY 65 A PHE 66 n 78 PHE 66 A LEU 67 n 79 LEU 67 A ALA 68 n 80 ALA 68 A CYS 69 n 81 CYS 69 A GLY 70 n 82 GLY 70 A ILE 71 n 83 ILE 71 A ASP 72 n 84 ASP 72 A PRO 73 n 85 PRO 73 A GLU 74 n 86 GLU 74 A LYS 75 n 87 LYS 75 A SER 76 n 88 SER 76 A VAL 77 n 89 VAL 77 A ILE 78 n 90 ILE 78 A PHE 79 n 91 PHE 79 A VAL 80 n 92 VAL 80 A GLN 81 n 93 GLN 81 A SER 82 n 94 SER 82 A GLY 83 n 95 GLY 83 A VAL 84 n 96 VAL 84 A LYS 85 n 97 LYS 85 A GLU 86 n 98 GLU 86 A HIS 87 n 99 HIS 87 A ALA 88 n 100 ALA 88 A GLU 89 n 101 GLU 89 A LEU 90 n 102 LEU 90 A ALA 91 n 103 ALA 91 A LEU 92 n 104 LEU 92 A LEU 93 n 105 LEU 93 A PHE 94 n 106 PHE 94 A SER 95 n 107 SER 95 A MET 96 n 108 MET 96 A ILE 97 n 109 ILE 97 A VAL 98 n 110 VAL 98 A SER 99 n 111 SER 99 A VAL 100 n 112 VAL 100 A SER 101 n 113 SER 101 A ARG 102 n 114 ARG 102 A LEU 103 n 115 LEU 103 A GLU 104 n 116 GLU 104 A ARG 105 n 117 ARG 105 A VAL 106 n 118 VAL 106 A PRO 107 n 119 PRO 107 A THR 108 n 120 THR 108 A TYR 109 n 121 TYR 109 A LYS 110 n 122 LYS 110 A GLU 111 n 123 GLU 111 A ILE 112 n 124 ILE 112 A n 125 113 A n 126 114 A n 127 115 A n 128 116 A n 129 117 A n 130 118 A n 131 119 A ASP 120 n 132 ASP 120 A LEU 121 n 133 LEU 121 A SER 122 n 134 SER 122 A THR 123 n 135 THR 123 A ALA 124 n 136 ALA 124 A GLY 125 n 137 GLY 125 A PHE 126 n 138 PHE 126 A LEU 127 n 139 LEU 127 A ILE 128 n 140 ILE 128 A TYR 129 n 141 TYR 129 A PRO 130 n 142 PRO 130 A VAL 131 n 143 VAL 131 A LEU 132 n 144 LEU 132 A GLN 133 n 145 GLN 133 A ALA 134 n 146 ALA 134 A ALA 135 n 147 ALA 135 A ASP 136 n 148 ASP 136 A ILE 137 n 149 ILE 137 A LEU 138 n 150 LEU 138 A ILE 139 n 151 ILE 139 A TYR 140 n 152 TYR 140 A LYS 141 n 153 LYS 141 A ALA 142 n 154 ALA 142 A GLU 143 n 155 GLU 143 A GLY 144 n 156 GLY 144 A VAL 145 n 157 VAL 145 A PRO 146 n 158 PRO 146 A VAL 147 n 159 VAL 147 A GLY 148 n 160 GLY 148 A GLU 149 n 161 GLU 149 A ASP 150 n 162 ASP 150 A GLN 151 n 163 GLN 151 A VAL 152 n 164 VAL 152 A TYR 153 n 165 TYR 153 A HIS 154 n 166 HIS 154 A ILE 155 n 167 ILE 155 A GLU 156 n 168 GLU 156 A LEU 157 n 169 LEU 157 A THR 158 n 170 THR 158 A ARG 159 n 171 ARG 159 A GLU 160 n 172 GLU 160 A ILE 161 n 173 ILE 161 A ALA 162 n 174 ALA 162 A ARG 163 n 175 ARG 163 A ARG 164 n 176 ARG 164 A PHE 165 n 177 PHE 165 A ASN 166 n 178 ASN 166 A TYR 167 n 179 TYR 167 A LEU 168 n 180 LEU 168 A TYR 169 n 181 TYR 169 A ASP 170 n 182 ASP 170 A GLU 171 n 183 GLU 171 A VAL 172 n 184 VAL 172 A PHE 173 n 185 PHE 173 A PRO 174 n 186 PRO 174 A GLU 175 n 187 GLU 175 A PRO 176 n 188 PRO 176 A GLU 177 n 189 GLU 177 A ALA 178 n 190 ALA 178 A ILE 179 n 191 ILE 179 A LEU 180 n 192 LEU 180 A SER 181 n 193 SER 181 A ARG 182 n 194 ARG 182 A VAL 183 n 195 VAL 183 A PRO 184 n 196 PRO 184 A LYS 185 n 197 LYS 185 A LEU 186 n 198 LEU 186 A PRO 187 n 199 PRO 187 A GLY 188 n 200 GLY 188 A THR 189 n 201 THR 189 A ASP 190 n 202 ASP 190 A GLY 191 n 203 GLY 191 A ARG 192 n 204 ARG 192 A LYS 193 n 205 LYS 193 A MET 194 n 206 MET 194 A SER 195 n 207 SER 195 A LYS 196 n 208 LYS 196 A SER 197 n 209 SER 197 A TYR 198 n 210 TYR 198 A GLY 199 n 211 GLY 199 A ASN 200 n 212 ASN 200 A ILE 201 n 213 ILE 201 A ILE 202 n 214 ILE 202 A ASN 203 n 215 ASN 203 A LEU 204 n 216 LEU 204 A GLU 205 n 217 GLU 205 A ILE 206 n 218 ILE 206 A SER 207 n 219 SER 207 A GLU 208 n 220 GLU 208 A LYS 209 n 221 LYS 209 A GLU 210 n 222 GLU 210 A LEU 211 n 223 LEU 211 A GLU 212 n 224 GLU 212 A GLN 213 n 225 GLN 213 A THR 214 n 226 THR 214 A ILE 215 n 227 ILE 215 A LEU 216 n 228 LEU 216 A ARG 217 n 229 ARG 217 A MET 218 n 230 MET 218 A MET 219 n 231 MET 219 A THR 220 n 232 THR 220 A ASP 221 n 233 ASP 221 A PRO 222 n 234 PRO 222 A ALA 223 n 235 ALA 223 A ARG 224 n 236 ARG 224 A VAL 225 n 237 VAL 225 A ARG 226 n 238 ARG 226 A ARG 227 n 239 ARG 227 A SER 228 n 240 SER 228 A ASP 229 n 241 ASP 229 A PRO 230 n 242 PRO 230 A GLY 231 n 243 GLY 231 A ASN 232 n 244 ASN 232 A PRO 233 n 245 PRO 233 A GLU 234 n 246 GLU 234 A ASN 235 n 247 ASN 235 A CYS 236 n 248 CYS 236 A PRO 237 n 249 PRO 237 A VAL 238 n 250 VAL 238 A TRP 239 n 251 TRP 239 A LYS 240 n 252 LYS 240 A TYR 241 n 253 TYR 241 A HIS 242 n 254 HIS 242 A GLN 243 n 255 GLN 243 A ALA 244 n 256 ALA 244 A PHE 245 n 257 PHE 245 A ASP 246 n 258 ASP 246 A ILE 247 n 259 ILE 247 A SER 248 n 260 SER 248 A GLU 249 n 261 GLU 249 A GLU 250 n 262 GLU 250 A GLU 251 n 263 GLU 251 A SER 252 n 264 SER 252 A LYS 253 n 265 LYS 253 A TRP 254 n 266 TRP 254 A VAL 255 n 267 VAL 255 A TRP 256 n 268 TRP 256 A GLU 257 n 269 GLU 257 A GLY 258 n 270 GLY 258 A CYS 259 n 271 CYS 259 A THR 260 n 272 THR 260 A THR 261 n 273 THR 261 A ALA 262 n 274 ALA 262 A SER 263 n 275 SER 263 A ILE 264 n 276 ILE 264 A GLY 265 n 277 GLY 265 A CYS 266 n 278 CYS 266 A VAL 267 n 279 VAL 267 A ASP 268 n 280 ASP 268 A CYS 269 n 281 CYS 269 A LYS 270 n 282 LYS 270 A LYS 271 n 283 LYS 271 A LEU 272 n 284 LEU 272 A LEU 273 n 285 LEU 273 A LEU 274 n 286 LEU 274 A LYS 275 n 287 LYS 275 A ASN 276 n 288 ASN 276 A MET 277 n 289 MET 277 A LYS 278 n 290 LYS 278 A ARG 279 n 291 ARG 279 A LYS 280 n 292 LYS 280 A LEU 281 n 293 LEU 281 A ALA 282 n 294 ALA 282 A PRO 283 n 295 PRO 283 A ILE 284 n 296 ILE 284 A TRP 285 n 297 TRP 285 A GLU 286 n 298 GLU 286 A ASN 287 n 299 ASN 287 A PHE 288 n 300 PHE 288 A ARG 289 n 301 ARG 289 A LYS 290 n 302 LYS 290 A ILE 291 n 303 ILE 291 A ASP 292 n 304 ASP 292 A GLU 293 n 305 GLU 293 A ASP 294 n 306 ASP 294 A PRO 295 n 307 PRO 295 A HIS 296 n 308 HIS 296 A TYR 297 n 309 TYR 297 A VAL 298 n 310 VAL 298 A ASP 299 n 311 ASP 299 A ASP 300 n 312 ASP 300 A VAL 301 n 313 VAL 301 A ILE 302 n 314 ILE 302 A MET 303 n 315 MET 303 A GLU 304 n 316 GLU 304 A GLY 305 n 317 GLY 305 A THR 306 n 318 THR 306 A LYS 307 n 319 LYS 307 A LYS 308 n 320 LYS 308 A ALA 309 n 321 ALA 309 A ARG 310 n 322 ARG 310 A GLU 311 n 323 GLU 311 A VAL 312 n 324 VAL 312 A ALA 313 n 325 ALA 313 A ALA 314 n 326 ALA 314 A LYS 315 n 327 LYS 315 A THR 316 n 328 THR 316 A MET 317 n 329 MET 317 A GLU 318 n 330 GLU 318 A GLU 319 n 331 GLU 319 A VAL 320 n 332 VAL 320 A ARG 321 n 333 ARG 321 A ARG 322 n 334 ARG 322 A ALA 323 n 335 ALA 323 A MET 324 n 336 MET 324 A ASN 325 n 337 ASN 325 A LEU 326 n 338 LEU 326 A MET 327 n 339 MET 327 A PHE 328 n 340 PHE 328 A 1.8135 0.9194 0.1771 4.2673 -0.0998 1.4552 -0.0069 -0.1954 -0.3373 0.0655 0.0903 -0.0994 0.1539 0.1612 -0.0834 -0.2319 0.0687 -0.0166 -0.1924 -0.0084 -0.1401 refined 17.1597 60.0352 2.6301 X-RAY DIFFRACTION 0.2449 -0.5585 -0.0514 3.6450 -0.4407 0.1420 -0.0542 -0.0888 -0.0269 0.3391 0.0589 -0.1949 0.1218 0.1664 -0.0047 -0.0796 0.0387 -0.0890 -0.0158 0.0029 -0.1731 refined 24.4836 63.4264 9.4529 X-RAY DIFFRACTION 0.6630 -1.3631 -0.0895 4.2801 0.3135 0.5379 -0.0348 -0.0275 -0.2607 -0.1106 0.1371 0.4635 0.2372 0.1200 -0.1023 0.0985 0.0292 -0.0199 0.0390 0.0329 0.0236 refined 19.0048 41.4477 1.7400 X-RAY DIFFRACTION A 0 A 12 A 112 A 124 X-RAY DIFFRACTION 1 ALL A 120 A 132 A 196 A 208 X-RAY DIFFRACTION 2 ALL A 197 A 209 A 400 B X-RAY DIFFRACTION 3 ALL author_and_software_defined_assembly PISA,PQS 2 dimeric gel filtration light scattering 5000 -85 27620 A CYS 236 A SG CYS 248 1_555 A SF4 400 B FE2 SF4 1_555 A SF4 400 B S1 SF4 1_555 117.3 A CYS 236 A SG CYS 248 1_555 A SF4 400 B FE2 SF4 1_555 A SF4 400 B S3 SF4 1_555 107.6 A SF4 400 B S1 SF4 1_555 A SF4 400 B FE2 SF4 1_555 A SF4 400 B S3 SF4 1_555 108.3 A CYS 236 A SG CYS 248 1_555 A SF4 400 B FE2 SF4 1_555 A SF4 400 B S4 SF4 1_555 110.8 A SF4 400 B S1 SF4 1_555 A SF4 400 B FE2 SF4 1_555 A SF4 400 B S4 SF4 1_555 107.4 A SF4 400 B S3 SF4 1_555 A SF4 400 B FE2 SF4 1_555 A SF4 400 B S4 SF4 1_555 104.8 A CYS 259 A SG CYS 271 1_555 A SF4 400 B FE1 SF4 1_555 A SF4 400 B S2 SF4 1_555 108.3 A CYS 259 A SG CYS 271 1_555 A SF4 400 B FE1 SF4 1_555 A SF4 400 B S3 SF4 1_555 111.6 A SF4 400 B S2 SF4 1_555 A SF4 400 B FE1 SF4 1_555 A SF4 400 B S3 SF4 1_555 109.0 A CYS 259 A SG CYS 271 1_555 A SF4 400 B FE1 SF4 1_555 A SF4 400 B S4 SF4 1_555 118.4 A SF4 400 B S2 SF4 1_555 A SF4 400 B FE1 SF4 1_555 A SF4 400 B S4 SF4 1_555 105.1 A SF4 400 B S3 SF4 1_555 A SF4 400 B FE1 SF4 1_555 A SF4 400 B S4 SF4 1_555 103.9 A CYS 266 A SG CYS 278 1_555 A SF4 400 B FE4 SF4 1_555 A SF4 400 B S1 SF4 1_555 107.8 A CYS 266 A SG CYS 278 1_555 A SF4 400 B FE4 SF4 1_555 A SF4 400 B S2 SF4 1_555 113.4 A SF4 400 B S1 SF4 1_555 A SF4 400 B FE4 SF4 1_555 A SF4 400 B S2 SF4 1_555 103.9 A CYS 266 A SG CYS 278 1_555 A SF4 400 B FE4 SF4 1_555 A SF4 400 B S3 SF4 1_555 114.9 A SF4 400 B S1 SF4 1_555 A SF4 400 B FE4 SF4 1_555 A SF4 400 B S3 SF4 1_555 107.0 A SF4 400 B S2 SF4 1_555 A SF4 400 B FE4 SF4 1_555 A SF4 400 B S3 SF4 1_555 109.1 A CYS 269 A SG CYS 281 1_555 A SF4 400 B FE3 SF4 1_555 A SF4 400 B S1 SF4 1_555 107.2 A CYS 269 A SG CYS 281 1_555 A SF4 400 B FE3 SF4 1_555 A SF4 400 B S2 SF4 1_555 108.7 A SF4 400 B S1 SF4 1_555 A SF4 400 B FE3 SF4 1_555 A SF4 400 B S2 SF4 1_555 105.5 A CYS 269 A SG CYS 281 1_555 A SF4 400 B FE3 SF4 1_555 A SF4 400 B S4 SF4 1_555 123.1 A SF4 400 B S1 SF4 1_555 A SF4 400 B FE3 SF4 1_555 A SF4 400 B S4 SF4 1_555 106.3 A SF4 400 B S2 SF4 1_555 A SF4 400 B FE3 SF4 1_555 A SF4 400 B S4 SF4 1_555 104.8 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 4_565 x,-y+1,-z crystal symmetry operation 0.0000000000 152.7300000000 0.0000000000 A N ILE 3 A N ILE 15 A O GLU 34 A O GLU 46 A N CYS 35 A N CYS 47 A O VAL 77 A O VAL 89 A N VAL 145 A N VAL 157 A O ILE 179 A O ILE 191 1 A CE LYS 12 A CE LYS 24 1 Y 1 A NZ LYS 12 A NZ LYS 24 1 Y 1 A CE LYS 27 A CE LYS 39 1 Y 1 A NZ LYS 27 A NZ LYS 39 1 Y 1 A CG GLU 74 A CG GLU 86 1 Y 1 A CD GLU 74 A CD GLU 86 1 Y 1 A OE1 GLU 74 A OE1 GLU 86 1 Y 1 A OE2 GLU 74 A OE2 GLU 86 1 Y 1 A OG1 THR 108 A OG1 THR 120 1 Y 1 A CG2 THR 108 A CG2 THR 120 1 Y 1 A CD LYS 110 A CD LYS 122 1 Y 1 A CE LYS 110 A CE LYS 122 1 Y 1 A NZ LYS 110 A NZ LYS 122 1 Y 1 A CD GLU 111 A CD GLU 123 1 Y 1 A OE1 GLU 111 A OE1 GLU 123 1 Y 1 A OE2 GLU 111 A OE2 GLU 123 1 Y 1 A CD GLU 149 A CD GLU 161 1 Y 1 A OE1 GLU 149 A OE1 GLU 161 1 Y 1 A OE2 GLU 149 A OE2 GLU 161 1 Y 1 A CG ASP 150 A CG ASP 162 1 Y 1 A OD1 ASP 150 A OD1 ASP 162 1 Y 1 A OD2 ASP 150 A OD2 ASP 162 1 Y 1 A CG ARG 182 A CG ARG 194 1 Y 1 A CD ARG 182 A CD ARG 194 1 Y 1 A NE ARG 182 A NE ARG 194 1 Y 1 A CZ ARG 182 A CZ ARG 194 1 Y 1 A NH1 ARG 182 A NH1 ARG 194 1 Y 1 A NH2 ARG 182 A NH2 ARG 194 1 Y 1 A CD LYS 185 A CD LYS 197 1 Y 1 A CE LYS 185 A CE LYS 197 1 Y 1 A NZ LYS 185 A NZ LYS 197 1 Y 1 A CE LYS 193 A CE LYS 205 1 Y 1 A NZ LYS 193 A NZ LYS 205 1 Y 1 A CD LYS 209 A CD LYS 221 1 Y 1 A CE LYS 209 A CE LYS 221 1 Y 1 A NZ LYS 209 A NZ LYS 221 1 Y 1 A CD GLU 210 A CD GLU 222 1 Y 1 A OE1 GLU 210 A OE1 GLU 222 1 Y 1 A OE2 GLU 210 A OE2 GLU 222 1 Y 1 A CD GLU 212 A CD GLU 224 1 Y 1 A OE1 GLU 212 A OE1 GLU 224 1 Y 1 A OE2 GLU 212 A OE2 GLU 224 1 Y 1 A CD GLN 213 A CD GLN 225 1 Y 1 A OE1 GLN 213 A OE1 GLN 225 1 Y 1 A NE2 GLN 213 A NE2 GLN 225 1 Y 1 A CE LYS 253 A CE LYS 265 1 Y 1 A NZ LYS 253 A NZ LYS 265 1 Y 1 A CG GLU 257 A CG GLU 269 1 Y 1 A CD GLU 257 A CD GLU 269 1 Y 1 A OE1 GLU 257 A OE1 GLU 269 1 Y 1 A OE2 GLU 257 A OE2 GLU 269 1 Y 1 A NZ LYS 271 A NZ LYS 283 1 Y 1 A CE LYS 307 A CE LYS 319 1 Y 1 A NZ LYS 307 A NZ LYS 319 1 Y 1 A CE LYS 315 A CE LYS 327 1 Y 1 A NZ LYS 315 A NZ LYS 327 1 Y 1 A MET -11 A MET 1 1 Y 1 A GLY -10 A GLY 2 1 Y 1 A SER -9 A SER 3 1 Y 1 A ASP -8 A ASP 4 1 Y 1 A LYS -7 A LYS 5 1 Y 1 A ILE -6 A ILE 6 1 Y 1 A HIS -5 A HIS 7 1 Y 1 A HIS -4 A HIS 8 1 Y 1 A HIS -3 A HIS 9 1 Y 1 A HIS -2 A HIS 10 1 Y 1 A HIS -1 A HIS 11 1 Y 1 A LYS 113 A LYS 125 1 Y 1 A SER 114 A SER 126 1 Y 1 A GLU 115 A GLU 127 1 Y 1 A LEU 116 A LEU 128 1 Y 1 A ASN 117 A ASN 129 1 Y 1 A TYR 118 A TYR 130 1 Y 1 A LYS 119 A LYS 131 1 Y 1 A A OH N TYR TRP 129 401 2.11 1 A TYR 109 -82.12 -83.59 1 A TYR 169 -122.15 -97.25 1 A LYS 193 -49.07 154.40 1 A GLU 205 -93.37 34.82 1 A ASN 235 -99.38 31.04 1 A HIS 296 93.30 -16.99 35.567 2.090 0.000 0.000 -1.520 0.000 -0.570 0.950 0.921 (1) HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. (2) IN THE ACTIVE SITE, L-TRYPTOPHAN WAS MODELLED BASED ON ELECTRON DENSITY. (3) A [4FE-4S] IS COORDINATED TO THE SIDE CHAINS OF CYS 236,259,266 AND 269. BASED ON ELECTRON DENSITY AND ITS GEOMETRY, IRON SULFUR CLUSTER IS VERY CONCLUSIVE. X-RAY FLUORESCENCE EXPERIMENTS CONFIRMED THE PRESENCE OF IRON. (4) THE RESIDUES OF A113 TO A119 WERE NOT VISIBLE IN THE ELECTRON DENSITY MAPS. 0.256 0.194 0.197 0.19724 2.500 29.64 894 17623 5.100 99.280 19.016 0.196 RANDOM LIKELY RESIDUAL 1 THROUGHOUT 0.00 MOLECULAR REPLACEMENT 0.324 0.259 0.800 0.800 1.200 1yi8B MAXIMUM LIKELIHOOD MASK 2.500 29.64 56 2626 23 0 2547 0.013 0.022 2650 0.001 0.020 1811 1.603 1.966 3601 1.012 3.002 4395 3.256 5.000 324 33.224 23.305 118 11.769 15.000 457 14.102 15.000 20 0.099 0.200 395 0.005 0.020 2917 0.001 0.020 544 0.226 0.200 651 0.191 0.200 1876 0.184 0.200 1345 0.087 0.200 1225 0.158 0.200 71 0.282 0.200 7 0.170 0.200 32 0.162 0.200 7 1.704 3.000 1703 0.328 3.000 650 2.751 5.000 2621 4.903 8.000 1140 6.681 11.000 967 0.463 0.327 2.565 61 1213 1274 20 98.910 49.406 2.500 29.64 2G36 17636 0.078 1 8.820 1.93 91.400 0.47 2.50 2.59 2.1 5268 2773 1 1.86 97.9 82.40 0.43 2.59 2.69 2.3 5461 2750 1 85.60 0.357 2.69 2.81 3.0 5606 2829 1 86.00 0.288 2.81 2.96 3.7 5910 2982 1 87.20 0.214 2.96 3.15 4.8 6088 3106 1 90.80 0.129 3.15 3.39 7.0 6052 3099 1 93.70 0.075 3.39 3.73 10.5 6298 3224 1 96.60 0.048 3.73 4.26 14.5 6335 3264 1 98.40 0.04 4.26 29.64 16.7 6391 3262 1 97.60 refinement Murshudov, G.N. ccp4@dl.ac.uk Fortran http://www.ccp4.ac.uk/main.html REFMAC program 5.2.0019 data scaling Wolfgang Kabsch http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html XSCALE program data extraction PDB sw-help@rcsb.rutgers.edu Nov. 1, 2005 C++ http://pdb.rutgers.edu/software/ PDB_EXTRACT package 1.701 data reduction XDS phasing MOLREP Crystal structure of Tryptophanyl-tRNA synthetase (EC 6.1.1.2) (Tryptophan-tRNA ligase)(TrpRS) (tm0492) from THERMOTOGA MARITIMA at 2.50 A resolution 1 N N 2 N N 3 N N 4 N N SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS A BIOLOGICALLY SIGNIFICANT OLIGIMERIZATION STATE. A HIS 14 A HIS 26 HELX_P A GLY 20 A GLY 32 1 1 7 A GLY 20 A GLY 32 HELX_P A GLU 31 A GLU 43 1 2 12 A ALA 40 A ALA 52 HELX_P A TYR 49 A TYR 61 1 3 10 A LYS 54 A LYS 66 HELX_P A CYS 69 A CYS 81 1 4 16 A SER 82 A SER 94 HELX_P A VAL 84 A VAL 96 5 5 3 A LYS 85 A LYS 97 HELX_P A MET 96 A MET 108 1 6 12 A SER 99 A SER 111 HELX_P A ARG 105 A ARG 117 1 7 7 A VAL 106 A VAL 118 HELX_P A GLU 111 A GLU 123 1 8 6 A THR 123 A THR 135 HELX_P A ILE 128 A ILE 140 1 9 6 A ILE 128 A ILE 140 HELX_P A ILE 139 A ILE 151 1 10 12 A GLY 148 A GLY 160 HELX_P A ASP 150 A ASP 162 5 11 3 A GLN 151 A GLN 163 HELX_P A TYR 169 A TYR 181 1 12 19 A SER 195 A SER 207 HELX_P A GLY 199 A GLY 211 5 13 5 A SER 207 A SER 219 HELX_P A ARG 217 A ARG 229 1 14 11 A ASN 232 A ASN 244 HELX_P A ASN 235 A ASN 247 5 15 4 A CYS 236 A CYS 248 HELX_P A PHE 245 A PHE 257 1 16 10 A SER 248 A SER 260 HELX_P A THR 261 A THR 273 1 17 14 A GLY 265 A GLY 277 HELX_P A ASP 294 A ASP 306 1 18 30 A HIS 296 A HIS 308 HELX_P A MET 324 A MET 336 1 19 29 metalc 2.285 A CYS 236 A SG CYS 248 1_555 A SF4 400 B FE2 SF4 1_555 metalc 2.341 A CYS 259 A SG CYS 271 1_555 A SF4 400 B FE1 SF4 1_555 metalc 2.296 A CYS 266 A SG CYS 278 1_555 A SF4 400 B FE4 SF4 1_555 metalc 2.299 A CYS 269 A SG CYS 281 1_555 A SF4 400 B FE3 SF4 1_555 LIGASE tm0492, Tryptophanyl-tRNA synthetase (EC 6.1.1.2) (Tryptophan-tRNA ligase)(TrpRS), Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI, LIGASE SYW_THEMA UNP 1 1 Q9WYW2 MRILSGMRPTGKLHIGHLVGALENWVKLQEEGNECFYFVADWHALTTHYDDVSKLKEYTRDLVRGFLACGIDPEKSVIFV QSGVKEHAELALLFSMIVSVSRLERVPTYKEIKSELNYKDLSTAGFLIYPVLQAADILIYKAEGVPVGEDQVYHIELTRE IARRFNYLYDEVFPEPEAILSRVPKLPGTDGRKMSKSYGNIINLEISEKELEQTILRMMTDPARVRRSDPGNPENCPVWK YHQAFDISEEESKWVWEGCTTASIGCVDCKKLLLKNMKRKLAPIWENFRKIDEDPHYVDDVIMEGTKKAREVAAKTMEEV RRAMNLMF 1 328 2G36 1 328 Q9WYW2 A 1 13 340 1 expression tag MET -11 2G36 A Q9WYW2 UNP 1 1 expression tag GLY -10 2G36 A Q9WYW2 UNP 2 1 expression tag SER -9 2G36 A Q9WYW2 UNP 3 1 expression tag ASP -8 2G36 A Q9WYW2 UNP 4 1 expression tag LYS -7 2G36 A Q9WYW2 UNP 5 1 expression tag ILE -6 2G36 A Q9WYW2 UNP 6 1 expression tag HIS -5 2G36 A Q9WYW2 UNP 7 1 expression tag HIS -4 2G36 A Q9WYW2 UNP 8 1 expression tag HIS -3 2G36 A Q9WYW2 UNP 9 1 expression tag HIS -2 2G36 A Q9WYW2 UNP 10 1 expression tag HIS -1 2G36 A Q9WYW2 UNP 11 1 expression tag HIS 0 2G36 A Q9WYW2 UNP 12 3 2 parallel parallel parallel A ARG 2 A ARG 14 A MET 7 A MET 19 A GLU 34 A GLU 46 A VAL 39 A VAL 51 A VAL 77 A VAL 89 A VAL 80 A VAL 92 A GLY 144 A GLY 156 A VAL 147 A VAL 159 A GLU 177 A GLU 189 A LEU 180 A LEU 192 BINDING SITE FOR RESIDUE SF4 A 400 A SF4 400 Software 8 BINDING SITE FOR RESIDUE TRP A 401 A TRP 401 Software 12 A THR 220 A THR 232 8 1_555 A ASP 221 A ASP 233 8 1_555 A ARG 224 A ARG 236 8 1_555 A CYS 236 A CYS 248 8 1_555 A VAL 238 A VAL 250 8 1_555 A CYS 259 A CYS 271 8 1_555 A CYS 266 A CYS 278 8 1_555 A CYS 269 A CYS 281 8 1_555 A LEU 4 A LEU 16 12 1_555 A SER 5 A SER 17 12 1_555 A GLY 6 A GLY 18 12 1_555 A ARG 8 A ARG 20 12 1_555 A HIS 43 A HIS 55 12 1_555 A TYR 129 A TYR 141 12 1_555 A GLN 133 A GLN 145 12 1_555 A ASP 136 A ASP 148 12 1_555 A ILE 137 A ILE 149 12 1_555 A VAL 145 A VAL 157 12 1_555 A GLN 151 A GLN 163 12 1_555 A HOH 411 D HOH 12 1_555 20 C 2 2 21