0.014328 0.008272 0.000000 0.000000 0.016545 0.000000 0.000000 0.000000 0.006243 0.00000 0.00000 0.00000 Wengerter, B.C. Patskovsky, Y. Zhan, C. Ramagopal, U. Milstein, S. Vidal, M. Almo, S.C. 0000-0002-2487-9713 Burley, S.K. New York SGX Research Center for Structural Genomics (NYSGXRC) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 18 90.00 90.00 120.00 69.792 69.792 160.188 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Na 1 22.990 SODIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N O N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N N N 108 N C N 109 N C N 110 N O N 111 N O N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N C N 118 N O N 119 N C N 120 N O N 121 N C N 122 N O N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N N N 132 S C N 133 N C N 134 N O N 135 N C Y 136 N C Y 137 N N Y 138 N C Y 139 N C Y 140 N N N 141 N O N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N O N 153 N H N 154 N H N 155 N N N 156 S C N 157 N C N 158 N O N 159 S C N 160 N C N 161 N C N 162 N C N 163 N O N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N N N 178 S C N 179 N C N 180 N O N 181 N C N 182 N C N 183 N C N 184 N C N 185 N O N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N N N 200 S C N 201 N C N 202 N O N 203 N C N 204 N C N 205 N C N 206 N C N 207 N N N 208 N O N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N N N 225 S C N 226 N C N 227 N O N 228 N C N 229 N C N 230 N S N 231 N C N 232 N O N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N NA N 245 N N N 246 S C N 247 N C N 248 N O N 249 N C Y 250 N C Y 251 N C Y 252 N C Y 253 N C Y 254 N C Y 255 N C N 256 N O N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N N N 269 S C N 270 N C N 271 N O N 272 N C N 273 N C N 274 N C N 275 N O N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N N N 286 S C N 287 N C N 288 N O N 289 N C N 290 N O N 291 N O N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N N N 300 S C N 301 N C N 302 N O N 303 R C N 304 N O N 305 N C N 306 N O N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N N N 317 S C N 318 N C N 319 N O N 320 N C Y 321 N C Y 322 N C Y 323 N C Y 324 N N Y 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N C N 330 N O N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N N N 344 S C N 345 N C N 346 N O N 347 N C Y 348 N C Y 349 N C Y 350 N C Y 351 N C Y 352 N C Y 353 N C N 354 N O N 355 N O N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N N N 368 S C N 369 N C N 370 N O N 371 N C N 372 N C N 373 N C N 374 N O N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N doub N 130 N sing N 131 N sing N 132 N sing N 133 N sing Y 134 N sing Y 135 N doub Y 136 N doub N 137 N sing Y 138 N sing N 139 N sing Y 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N doub N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N doub N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N doub N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N doub N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing Y 242 N doub Y 243 N sing Y 244 N sing N 245 N sing Y 246 N doub N 247 N sing Y 248 N doub N 249 N sing Y 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N doub N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N doub N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N doub N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N doub N 307 N sing N 308 N sing N 309 N sing N 310 N sing Y 311 N doub Y 312 N sing Y 313 N sing N 314 N sing Y 315 N doub Y 316 N sing Y 317 N sing N 318 N sing Y 319 N sing Y 320 N doub N 321 N sing Y 322 N doub N 323 N sing Y 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N doub N 335 N sing N 336 N sing N 337 N sing N 338 N sing Y 339 N doub Y 340 N sing Y 341 N sing N 342 N sing Y 343 N doub N 344 N sing Y 345 N doub N 346 N sing Y 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N doub N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing To be Published 0353 Crystal Structure of Caenorhabditis Elegans 6-Pyruvoyl Tetrahydropterin Synthase 10.2210/pdb2g64/pdb pdb_00002g64 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 MIRRORS IMAGE PLATE 2006-01-31 RIGAKU RAXIS IV MIRRORS SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 16055.360 Putative 6-pyruvoyl tetrahydrobiopterin synthase 4.2.3.12 C140S 1 man polymer 22.990 SODIUM ION 2 syn non-polymer 65.409 ZINC ION 1 syn non-polymer 92.094 GLYCEROL 1 syn non-polymer 18.015 water 167 nat water PTPS, PTP synthase no no MFRMPIVTMERVDSFSAAHRLHSEKLSDAENKETFGKCNNSNGHGHNYVWKVKLRGEVDPTSGMVYDLAKLKKEMSLVLD TVDHRNLDKDVEFFKTTVSTSENVAIYMFEKLKSVMSNPSVLYKVTIEETPKNIFTYKGS MFRMPIVTMERVDSFSAAHRLHSEKLSDAENKETFGKCNNSNGHGHNYVWKVKLRGEVDPTSGMVYDLAKLKKEMSLVLD TVDHRNLDKDVEFFKTTVSTSENVAIYMFEKLKSVMSNPSVLYKVTIEETPKNIFTYKGS A NYSGXRC-T2216 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Caenorhabditis Escherichia sample B0041.6 6239 Caenorhabditis elegans 562 Escherichia coli BL21 AI plasmid pET3a 1 2.34 47.38 VAPOR DIFFUSION, SITTING DROP 7.00 100 MM HEPES, 1 M SODIUM SUCCINATE, PH 7.00, 1% PEG 2000ME, VAPOR DIFFUSION, SITTING DROP, temperature 290K 290 New York SGX Research Center for Structural Genomics NYSGXRC PSI, Protein Structure Initiative audit_author pdbx_struct_conn_angle struct_conn struct_site database_2 struct_ref_seq_dif chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Derived calculations Version format compliance Derived calculations Structure summary Database references Data collection Refinement description 1 0 2006-03-14 1 1 2008-05-01 1 2 2011-07-13 1 3 2021-02-03 1 4 2021-10-20 1 5 2023-08-30 _audit_author.identifier_ORCID _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_symmetry _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details Y RCSB Y RCSB 2006-02-24 REL REL NA SODIUM ION ZN ZINC ION GOL GLYCEROL HOH water 1B66 PDB experimental model NA 1 2 NA NA 1001 A NA 2 2 NA NA 1002 A ZN 1 3 ZN ZN 2001 A GOL 1 4 GOL GOL 3001 A HOH 3 5 HOH HOH 3002 A HOH 4 5 HOH HOH 3003 A HOH 5 5 HOH HOH 3004 A HOH 6 5 HOH HOH 3005 A HOH 7 5 HOH HOH 3006 A HOH 8 5 HOH HOH 3007 A HOH 9 5 HOH HOH 3008 A HOH 10 5 HOH HOH 3009 A HOH 12 5 HOH HOH 3010 A HOH 13 5 HOH HOH 3011 A HOH 14 5 HOH HOH 3012 A HOH 15 5 HOH HOH 3013 A HOH 16 5 HOH HOH 3014 A HOH 18 5 HOH HOH 3015 A HOH 19 5 HOH HOH 3016 A HOH 20 5 HOH HOH 3017 A HOH 21 5 HOH HOH 3018 A HOH 22 5 HOH HOH 3019 A HOH 23 5 HOH HOH 3020 A HOH 24 5 HOH HOH 3021 A HOH 25 5 HOH HOH 3022 A HOH 26 5 HOH HOH 3023 A HOH 27 5 HOH HOH 3024 A HOH 28 5 HOH HOH 3025 A HOH 29 5 HOH HOH 3026 A HOH 30 5 HOH HOH 3027 A HOH 31 5 HOH HOH 3028 A HOH 32 5 HOH HOH 3029 A HOH 33 5 HOH HOH 3030 A HOH 34 5 HOH HOH 3031 A HOH 35 5 HOH HOH 3032 A HOH 36 5 HOH HOH 3033 A HOH 38 5 HOH HOH 3034 A HOH 39 5 HOH HOH 3035 A HOH 40 5 HOH HOH 3036 A HOH 42 5 HOH HOH 3037 A HOH 43 5 HOH HOH 3038 A HOH 44 5 HOH HOH 3039 A HOH 45 5 HOH HOH 3040 A HOH 46 5 HOH HOH 3041 A HOH 47 5 HOH HOH 3042 A HOH 49 5 HOH HOH 3043 A HOH 50 5 HOH HOH 3044 A HOH 51 5 HOH HOH 3045 A HOH 52 5 HOH HOH 3046 A HOH 53 5 HOH HOH 3047 A HOH 54 5 HOH HOH 3048 A HOH 56 5 HOH HOH 3049 A HOH 57 5 HOH HOH 3050 A HOH 58 5 HOH HOH 3051 A HOH 59 5 HOH HOH 3052 A HOH 60 5 HOH HOH 3053 A HOH 61 5 HOH HOH 3054 A HOH 62 5 HOH HOH 3055 A HOH 63 5 HOH HOH 3056 A HOH 64 5 HOH HOH 3057 A HOH 65 5 HOH HOH 3058 A HOH 67 5 HOH HOH 3059 A HOH 69 5 HOH HOH 3060 A HOH 70 5 HOH HOH 3061 A HOH 71 5 HOH HOH 3062 A HOH 72 5 HOH HOH 3063 A HOH 73 5 HOH HOH 3064 A HOH 74 5 HOH HOH 3065 A HOH 75 5 HOH HOH 3066 A HOH 76 5 HOH HOH 3067 A HOH 77 5 HOH HOH 3068 A HOH 78 5 HOH HOH 3069 A HOH 79 5 HOH HOH 3070 A HOH 80 5 HOH HOH 3071 A HOH 81 5 HOH HOH 3072 A HOH 83 5 HOH HOH 3073 A HOH 84 5 HOH HOH 3074 A HOH 85 5 HOH HOH 3075 A HOH 86 5 HOH HOH 3076 A HOH 91 5 HOH HOH 3077 A HOH 93 5 HOH HOH 3078 A HOH 94 5 HOH HOH 3079 A HOH 95 5 HOH HOH 3080 A HOH 96 5 HOH HOH 3081 A HOH 97 5 HOH HOH 3082 A HOH 98 5 HOH HOH 3083 A HOH 99 5 HOH HOH 3084 A HOH 100 5 HOH HOH 3085 A HOH 101 5 HOH HOH 3086 A HOH 102 5 HOH HOH 3087 A HOH 103 5 HOH HOH 3088 A HOH 104 5 HOH HOH 3089 A HOH 105 5 HOH HOH 3090 A HOH 106 5 HOH HOH 3091 A HOH 107 5 HOH HOH 3092 A HOH 108 5 HOH HOH 3093 A HOH 109 5 HOH HOH 3094 A HOH 110 5 HOH HOH 3095 A HOH 111 5 HOH HOH 3096 A HOH 112 5 HOH HOH 3097 A HOH 113 5 HOH HOH 3098 A HOH 114 5 HOH HOH 3099 A HOH 115 5 HOH HOH 3100 A HOH 116 5 HOH HOH 3101 A HOH 117 5 HOH HOH 3102 A HOH 118 5 HOH HOH 3103 A HOH 119 5 HOH HOH 3104 A HOH 120 5 HOH HOH 3105 A HOH 121 5 HOH HOH 3106 A HOH 122 5 HOH HOH 3107 A HOH 124 5 HOH HOH 3108 A HOH 125 5 HOH HOH 3109 A HOH 126 5 HOH HOH 3110 A HOH 127 5 HOH HOH 3111 A HOH 128 5 HOH HOH 3112 A HOH 129 5 HOH HOH 3113 A HOH 130 5 HOH HOH 3114 A HOH 131 5 HOH HOH 3115 A HOH 136 5 HOH HOH 3116 A HOH 138 5 HOH HOH 3117 A HOH 139 5 HOH HOH 3118 A HOH 2 5 HOH HOH 3119 A HOH 3 5 HOH HOH 3120 A HOH 4 5 HOH HOH 3121 A HOH 5 5 HOH HOH 3122 A HOH 6 5 HOH HOH 3123 A HOH 7 5 HOH HOH 3124 A HOH 8 5 HOH HOH 3125 A HOH 9 5 HOH HOH 3126 A HOH 10 5 HOH HOH 3127 A HOH 11 5 HOH HOH 3128 A HOH 12 5 HOH HOH 3129 A HOH 13 5 HOH HOH 3130 A HOH 14 5 HOH HOH 3131 A HOH 15 5 HOH HOH 3132 A HOH 16 5 HOH HOH 3133 A HOH 17 5 HOH HOH 3134 A HOH 18 5 HOH HOH 3135 A HOH 19 5 HOH HOH 3136 A HOH 20 5 HOH HOH 3137 A HOH 21 5 HOH HOH 3138 A HOH 22 5 HOH HOH 3139 A HOH 23 5 HOH HOH 3140 A HOH 24 5 HOH HOH 3141 A HOH 25 5 HOH HOH 3142 A HOH 26 5 HOH HOH 3143 A HOH 27 5 HOH HOH 3144 A HOH 28 5 HOH HOH 3145 A HOH 29 5 HOH HOH 3146 A HOH 30 5 HOH HOH 3147 A HOH 31 5 HOH HOH 3148 A HOH 32 5 HOH HOH 3149 A HOH 33 5 HOH HOH 3150 A HOH 34 5 HOH HOH 3151 A HOH 35 5 HOH HOH 3152 A HOH 36 5 HOH HOH 3153 A HOH 37 5 HOH HOH 3154 A HOH 38 5 HOH HOH 3155 A HOH 39 5 HOH HOH 3156 A HOH 40 5 HOH HOH 3157 A HOH 41 5 HOH HOH 3158 A HOH 42 5 HOH HOH 3159 A HOH 43 5 HOH HOH 3160 A HOH 44 5 HOH HOH 3161 A HOH 45 5 HOH HOH 3162 A HOH 46 5 HOH HOH 3163 A HOH 47 5 HOH HOH 3164 A HOH 48 5 HOH HOH 3165 A HOH 49 5 HOH HOH 3166 A HOH 50 5 HOH HOH 3167 A HOH 51 5 HOH HOH 3168 A MET 1 n 1 MET 1 A PHE 2 n 2 PHE 2 A ARG 3 n 3 ARG 3 A MET 4 n 4 MET 4 A PRO 5 n 5 PRO 5 A ILE 6 n 6 ILE 6 A VAL 7 n 7 VAL 7 A THR 8 n 8 THR 8 A MET 9 n 9 MET 9 A GLU 10 n 10 GLU 10 A ARG 11 n 11 ARG 11 A VAL 12 n 12 VAL 12 A ASP 13 n 13 ASP 13 A SER 14 n 14 SER 14 A PHE 15 n 15 PHE 15 A SER 16 n 16 SER 16 A ALA 17 n 17 ALA 17 A ALA 18 n 18 ALA 18 A HIS 19 n 19 HIS 19 A ARG 20 n 20 ARG 20 A LEU 21 n 21 LEU 21 A HIS 22 n 22 HIS 22 A SER 23 n 23 SER 23 A GLU 24 n 24 GLU 24 A LYS 25 n 25 LYS 25 A LEU 26 n 26 LEU 26 A SER 27 n 27 SER 27 A ASP 28 n 28 ASP 28 A ALA 29 n 29 ALA 29 A GLU 30 n 30 GLU 30 A ASN 31 n 31 ASN 31 A LYS 32 n 32 LYS 32 A GLU 33 n 33 GLU 33 A THR 34 n 34 THR 34 A PHE 35 n 35 PHE 35 A GLY 36 n 36 GLY 36 A LYS 37 n 37 LYS 37 A CYS 38 n 38 CYS 38 A ASN 39 n 39 ASN 39 A ASN 40 n 40 ASN 40 A SER 41 n 41 SER 41 A ASN 42 n 42 ASN 42 A GLY 43 n 43 GLY 43 A HIS 44 n 44 HIS 44 A GLY 45 n 45 GLY 45 A HIS 46 n 46 HIS 46 A ASN 47 n 47 ASN 47 A TYR 48 n 48 TYR 48 A VAL 49 n 49 VAL 49 A TRP 50 n 50 TRP 50 A LYS 51 n 51 LYS 51 A VAL 52 n 52 VAL 52 A LYS 53 n 53 LYS 53 A LEU 54 n 54 LEU 54 A ARG 55 n 55 ARG 55 A GLY 56 n 56 GLY 56 A GLU 57 n 57 GLU 57 A VAL 58 n 58 VAL 58 A ASP 59 n 59 ASP 59 A PRO 60 n 60 PRO 60 A THR 61 n 61 THR 61 A SER 62 n 62 SER 62 A GLY 63 n 63 GLY 63 A MET 64 n 64 MET 64 A VAL 65 n 65 VAL 65 A TYR 66 n 66 TYR 66 A ASP 67 n 67 ASP 67 A LEU 68 n 68 LEU 68 A ALA 69 n 69 ALA 69 A LYS 70 n 70 LYS 70 A LEU 71 n 71 LEU 71 A LYS 72 n 72 LYS 72 A LYS 73 n 73 LYS 73 A GLU 74 n 74 GLU 74 A MET 75 n 75 MET 75 A SER 76 n 76 SER 76 A LEU 77 n 77 LEU 77 A VAL 78 n 78 VAL 78 A LEU 79 n 79 LEU 79 A ASP 80 n 80 ASP 80 A THR 81 n 81 THR 81 A VAL 82 n 82 VAL 82 A ASP 83 n 83 ASP 83 A HIS 84 n 84 HIS 84 A ARG 85 n 85 ARG 85 A ASN 86 n 86 ASN 86 A LEU 87 n 87 LEU 87 A ASP 88 n 88 ASP 88 A LYS 89 n 89 LYS 89 A ASP 90 n 90 ASP 90 A VAL 91 n 91 VAL 91 A GLU 92 n 92 GLU 92 A PHE 93 n 93 PHE 93 A PHE 94 n 94 PHE 94 A LYS 95 n 95 LYS 95 A THR 96 n 96 THR 96 A THR 97 n 97 THR 97 A VAL 98 n 98 VAL 98 A SER 99 n 99 SER 99 A THR 100 n 100 THR 100 A SER 101 n 101 SER 101 A GLU 102 n 102 GLU 102 A ASN 103 n 103 ASN 103 A VAL 104 n 104 VAL 104 A ALA 105 n 105 ALA 105 A ILE 106 n 106 ILE 106 A TYR 107 n 107 TYR 107 A MET 108 n 108 MET 108 A PHE 109 n 109 PHE 109 A GLU 110 n 110 GLU 110 A LYS 111 n 111 LYS 111 A LEU 112 n 112 LEU 112 A LYS 113 n 113 LYS 113 A SER 114 n 114 SER 114 A VAL 115 n 115 VAL 115 A MET 116 n 116 MET 116 A SER 117 n 117 SER 117 A ASN 118 n 118 ASN 118 A PRO 119 n 119 PRO 119 A SER 120 n 120 SER 120 A VAL 121 n 121 VAL 121 A LEU 122 n 122 LEU 122 A TYR 123 n 123 TYR 123 A LYS 124 n 124 LYS 124 A VAL 125 n 125 VAL 125 A THR 126 n 126 THR 126 A ILE 127 n 127 ILE 127 A GLU 128 n 128 GLU 128 A GLU 129 n 129 GLU 129 A THR 130 n 130 THR 130 A PRO 131 n 131 PRO 131 A LYS 132 n 132 LYS 132 A ASN 133 n 133 ASN 133 A ILE 134 n 134 ILE 134 A PHE 135 n 135 PHE 135 A THR 136 n 136 THR 136 A TYR 137 n 137 TYR 137 A LYS 138 n 138 LYS 138 A GLY 139 n 139 GLY 139 A SER 140 n 140 SER 140 A author_and_software_defined_assembly PISA,PQS 6 hexameric 14840 -352 37860 A HIS 19 A NE2 HIS 19 1_555 A ZN 2001 D ZN ZN 1_555 A HIS 44 A NE2 HIS 44 1_555 93.9 A HIS 19 A NE2 HIS 19 1_555 A ZN 2001 D ZN ZN 1_555 A HIS 46 A NE2 HIS 46 1_555 111.5 A HIS 44 A NE2 HIS 44 1_555 A ZN 2001 D ZN ZN 1_555 A HIS 46 A NE2 HIS 46 1_555 109.3 A HIS 19 A NE2 HIS 19 1_555 A ZN 2001 D ZN ZN 1_555 A HOH 3084 F O HOH 11_566 166.5 A HIS 44 A NE2 HIS 44 1_555 A ZN 2001 D ZN ZN 1_555 A HOH 3084 F O HOH 11_566 83.7 A HIS 46 A NE2 HIS 46 1_555 A ZN 2001 D ZN ZN 1_555 A HOH 3084 F O HOH 11_566 81.7 A HIS 19 A NE2 HIS 19 1_555 A ZN 2001 D ZN ZN 1_555 A HOH 3139 F O HOH 1_555 109.0 A HIS 44 A NE2 HIS 44 1_555 A ZN 2001 D ZN ZN 1_555 A HOH 3139 F O HOH 1_555 111.5 A HIS 46 A NE2 HIS 46 1_555 A ZN 2001 D ZN ZN 1_555 A HOH 3139 F O HOH 1_555 118.8 A HOH 3084 F O HOH 11_566 A ZN 2001 D ZN ZN 1_555 A HOH 3139 F O HOH 1_555 60.2 A CYS 38 A O CYS 38 1_555 A NA 1002 C NA NA 1_555 A ASN 40 A O ASN 40 1_555 111.6 A CYS 38 A O CYS 38 1_555 A NA 1002 C NA NA 1_555 A HIS 44 A ND1 HIS 44 1_555 86.6 A ASN 40 A O ASN 40 1_555 A NA 1002 C NA NA 1_555 A HIS 44 A ND1 HIS 44 1_555 159.9 A ASN 47 A O ASN 47 1_555 A NA 1001 B NA NA 1_555 A HOH 3019 F O HOH 1_555 150.6 A ASN 47 A O ASN 47 1_555 A NA 1001 B NA NA 1_555 A HOH 3117 F O HOH 1_555 69.9 A HOH 3019 F O HOH 1_555 A NA 1001 B NA NA 1_555 A HOH 3117 F O HOH 1_555 106.9 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 -0.8660254038 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_665 -y+1,x-y+1,z crystal symmetry operation 34.8960000000 60.4416449809 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 3_565 -x+y,-x+1,z crystal symmetry operation -34.8960000000 60.4416449809 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 10_456 y-1/3,x+1/3,-z+4/3 crystal symmetry operation -34.8960000000 20.1472149936 213.5840000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 11_566 x-y+2/3,-y+4/3,-z+4/3 crystal symmetry operation 0.0000000000 80.5888599746 213.5840000000 -0.5000000000 -0.8660254038 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 12_556 -x+2/3,-x+y+1/3,-z+4/3 crystal symmetry operation 34.8960000000 20.1472149936 213.5840000000 A O ARG 85 A O ARG 85 A N ALA 18 A N ALA 18 A N MET 9 A N MET 9 A O LEU 54 A O LEU 54 A N LYS 53 A N LYS 53 A O LYS 124 A O LYS 124 A N ILE 127 A N ILE 127 A O PHE 135 A O PHE 135 1 A SER 99 -85.25 39.95 22.347 0.11 0.05 0.00 0.11 0.00 -0.16 0.960 0.925 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.21902 0.16058 0.163 0.16238 1.80 20.00 442 13641 13641 3.1 98.70 2.541 0.081 RANDOM 1 isotropic THROUGHOUT 0.00 MOLECULAR REPLACEMENT 0.120 0.126 0.80 0.80 1.20 1B66 MAXIMUM LIKELIHOOD MASK 0.171 5.0 1.80 20.00 167 1300 9 0 1124 0.011 0.022 1226 1.251 1.965 1666 6.227 5.000 163 36.923 24.340 53 14.944 15.000 246 23.580 15.000 6 0.113 0.200 189 0.005 0.020 903 0.232 0.300 560 0.310 0.500 833 0.189 0.500 233 0.193 0.500 1 0.187 0.300 89 0.280 0.500 33 4.136 2.000 737 5.346 3.000 1217 9.172 3.000 499 10.877 5.000 436 0.333 0.02 0.208 1.847 30 981 981 20 97.40 1.800 50.000 2G64 14091 14091 0.000 0.000 0.031 0.03 1 38.9000 10.400 98.7 0.094 1.80 1.86 14.600 1380 0.103 1 5.20 97.9 data reduction DENZO data scaling SCALEPACK phasing MOLREP refinement REFMAC 5.2.0005 Structure of Caenorhabditis elegans 6-pyruvoyl tetrahydropterin synthase 1 N N 2 N N 2 N N 3 N N 4 N N 5 N N A SER 27 A SER 27 HELX_P A GLY 36 A GLY 36 1 1 10 A LYS 37 A LYS 37 HELX_P A ASN 40 A ASN 40 5 2 4 A ASP 67 A ASP 67 HELX_P A THR 81 A THR 81 1 3 15 A LEU 87 A LEU 87 HELX_P A VAL 91 A VAL 91 1 4 5 A GLU 92 A GLU 92 HELX_P A THR 96 A THR 96 5 5 5 A THR 100 A THR 100 HELX_P A MET 116 A MET 116 1 6 17 A ASN 118 A ASN 118 HELX_P A SER 120 A SER 120 5 7 3 metalc 2.128 A HIS 19 A NE2 HIS 19 1_555 A ZN 2001 D ZN ZN 1_555 metalc 2.731 A CYS 38 A O CYS 38 1_555 A NA 1002 C NA NA 1_555 metalc 2.833 A ASN 40 A O ASN 40 1_555 A NA 1002 C NA NA 1_555 metalc 2.867 A HIS 44 A ND1 HIS 44 1_555 A NA 1002 C NA NA 1_555 metalc 2.137 A HIS 44 A NE2 HIS 44 1_555 A ZN 2001 D ZN ZN 1_555 metalc 2.097 A HIS 46 A NE2 HIS 46 1_555 A ZN 2001 D ZN ZN 1_555 metalc 2.986 A ASN 47 A O ASN 47 1_555 A NA 1001 B NA NA 1_555 metalc 2.652 A NA 1001 B NA NA 1_555 A HOH 3019 F O HOH 1_555 metalc 2.777 A NA 1001 B NA NA 1_555 A HOH 3117 F O HOH 1_555 metalc 2.727 A ZN 2001 D ZN ZN 1_555 A HOH 3084 F O HOH 11_566 metalc 1.827 A ZN 2001 D ZN ZN 1_555 A HOH 3139 F O HOH 1_555 LYASE TETRAHYDROBIOPTERIN BIOSYNTHESIS, PHOSPHATE ELIMINATION, PTERINE SYNTHESIS, Structural Genomics, PSI, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, NYSGXRC, Lyase PTPS_CAEEL UNP 1 1 O02058 MFRMPIVTMERVDSFSAAHRLHSEKLSDAENKETFGKCNNSNGHGHNYVWKVKLRGEVDPTSGMVYDLAKLKKEMSLVLD TVDHRNLDKDVEFFKTTVSTSENVAIYMFEKLKSVMSNPSVLYKVTIEETPKNIFTYKGC 1 140 2G64 1 140 O02058 A 1 1 140 1 CYS engineered mutation SER 140 2G64 A O02058 UNP 140 140 5 parallel anti-parallel anti-parallel anti-parallel A ARG 85 A ARG 85 A ASN 86 A ASN 86 A ILE 6 A ILE 6 A HIS 19 A HIS 19 A HIS 44 A HIS 44 A GLU 57 A GLU 57 A LEU 122 A LEU 122 A THR 130 A THR 130 A ASN 133 A ASN 133 A TYR 137 A TYR 137 BINDING SITE FOR RESIDUE NA A 1001 A NA 1001 Software 7 BINDING SITE FOR RESIDUE NA A 1002 A NA 1002 Software 5 BINDING SITE FOR RESIDUE ZN A 2001 A ZN 2001 Software 5 BINDING SITE FOR RESIDUE GOL A 3001 A GOL 3001 Software 5 A ASN 47 A ASN 47 7 1_555 A GLU 128 A GLU 128 7 1_555 A GLU 129 A GLU 129 7 1_555 A THR 130 A THR 130 7 1_555 A PRO 131 A PRO 131 7 1_555 A HOH 3019 F HOH 7 1_555 A HOH 3117 F HOH 7 1_555 A ARG 20 A ARG 20 5 1_555 A CYS 38 A CYS 38 5 1_555 A ASN 40 A ASN 40 5 1_555 A GLY 43 A GLY 43 5 1_555 A HIS 44 A HIS 44 5 1_555 A HIS 19 A HIS 19 5 1_555 A HIS 44 A HIS 44 5 1_555 A HIS 46 A HIS 46 5 1_555 A HOH 3084 F HOH 5 11_566 A HOH 3139 F HOH 5 1_555 A LYS 53 A LYS 53 5 1_555 A TYR 123 A TYR 123 5 1_555 A LYS 124 A LYS 124 5 1_555 A HOH 3116 F HOH 5 2_665 A HOH 3121 F HOH 5 1_555 155 H 3 2