0.023212
0.000000
0.000000
0.000000
0.011701
0.000000
0.000000
0.000000
0.015567
0.00000
0.00000
0.00000
Palaninathan, S.K.
Smith, C.
Safe, S.H.
Kelly, J.W.
Sacchettini, J.C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
43.081
85.461
64.237
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C12 H5 Cl5 O
342.432
2',3,3',4',5-PENTACHLOROBIPHENYL-4-OL
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
O
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
N
N
108
N
C
N
109
N
C
N
110
N
O
N
111
N
O
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
N
N
118
S
C
N
119
N
C
N
120
N
O
N
121
N
C
Y
122
N
C
Y
123
N
N
Y
124
N
C
Y
125
N
C
Y
126
N
N
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
O
N
139
N
H
N
140
N
H
N
141
N
N
N
142
S
C
N
143
N
C
N
144
N
O
N
145
S
C
N
146
N
C
N
147
N
C
N
148
N
C
N
149
N
O
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
N
N
164
S
C
N
165
N
C
N
166
N
O
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
C
N
171
N
O
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
N
N
186
S
C
N
187
N
C
N
188
N
O
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
C
N
193
N
N
N
194
N
O
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
N
N
211
S
C
N
212
N
C
N
213
N
O
N
214
N
C
N
215
N
C
N
216
N
S
N
217
N
C
N
218
N
O
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
CL
Y
231
N
C
Y
232
N
C
N
233
N
CL
Y
234
N
C
N
235
N
CL
Y
236
N
C
Y
237
N
C
Y
238
N
C
Y
239
N
C
Y
240
N
C
Y
241
N
C
N
242
N
CL
Y
243
N
C
Y
244
N
C
N
245
N
CL
Y
246
N
C
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
N
N
254
S
C
N
255
N
C
N
256
N
O
N
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
Y
261
N
C
Y
262
N
C
Y
263
N
C
N
264
N
O
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
N
281
N
C
N
282
N
C
N
283
N
O
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
N
N
294
S
C
N
295
N
C
N
296
N
O
N
297
N
C
N
298
N
O
N
299
N
O
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
R
C
N
312
N
O
N
313
N
C
N
314
N
O
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
N
N
325
S
C
N
326
N
C
N
327
N
O
N
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
Y
332
N
N
Y
333
N
C
Y
334
N
C
Y
335
N
C
Y
336
N
C
Y
337
N
C
N
338
N
O
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
N
N
352
S
C
N
353
N
C
N
354
N
O
N
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
Y
359
N
C
Y
360
N
C
Y
361
N
C
N
362
N
O
N
363
N
O
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
N
N
376
S
C
N
377
N
C
N
378
N
O
N
379
N
C
N
380
N
C
N
381
N
C
N
382
N
O
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
doub
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
Y
121
N
sing
Y
122
N
doub
Y
123
N
doub
N
124
N
sing
Y
125
N
sing
N
126
N
sing
Y
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
doub
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
doub
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
doub
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
Y
219
N
sing
Y
220
N
doub
N
221
N
sing
Y
222
N
doub
N
223
N
sing
Y
224
N
sing
Y
225
N
sing
N
226
N
sing
Y
227
N
doub
N
228
N
sing
Y
229
N
sing
Y
230
N
sing
Y
231
N
doub
Y
232
N
doub
N
233
N
sing
N
234
N
sing
Y
235
N
sing
Y
236
N
sing
N
237
N
sing
N
238
N
sing
Y
239
N
doub
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
doub
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
Y
253
N
doub
Y
254
N
sing
Y
255
N
sing
N
256
N
sing
Y
257
N
doub
N
258
N
sing
Y
259
N
doub
N
260
N
sing
Y
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
doub
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
doub
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
doub
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
doub
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
Y
322
N
doub
Y
323
N
sing
Y
324
N
sing
N
325
N
sing
Y
326
N
doub
Y
327
N
sing
Y
328
N
sing
N
329
N
sing
Y
330
N
sing
Y
331
N
doub
N
332
N
sing
Y
333
N
doub
N
334
N
sing
Y
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
Y
350
N
doub
Y
351
N
sing
Y
352
N
sing
N
353
N
sing
Y
354
N
doub
N
355
N
sing
Y
356
N
doub
N
357
N
sing
Y
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
doub
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
UK
Chem.Biol.
CBOLE2
2050
1074-5521
11
1719
1728
10.1016/j.chembiol.2004.10.009
15610856
Hydroxylated polychlorinated biphenyls selectively bind transthyretin in blood and inhibit amyloidogenesis: rationalizing rodent PCB toxicity
2004
10.2210/pdb2g9k/pdb
pdb_00002g9k
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
120.0
1
IMAGE PLATE
1999-07-31
MAC Science DIP-2030
MIRRORS
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU
13777.360
Transthyretin
2
man
polymer
342.432
2',3,3',4',5-PENTACHLOROBIPHENYL-4-OL
2
syn
non-polymer
18.015
water
51
nat
water
Prealbumin, TBPA, TTR, ATTR
no
no
GPTGTGESKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWK
ALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNPKE
GPTGTGESKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWK
ALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNPKE
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
TTR, PALB
9606
Homo sapiens
562
Escherichia coli
PLASMID
PHNTR, PKNTR
1
2.14
42.64
VAPOR DIFFUSION, HANGING DROP
7.00
CRYSTALLIZATION CONDITIONS: CRYSTALS OF RECOMBINANT WT TTR WERE
OBTAINED FROM PROTEIN SOLUTIONS AT 5 MG/ML (IN 100 MM KCL, 100
MM PHOSPHATE [PH 7.4], 1 M AMMONIUM SULFATE) EQUILIBRATED
AGAINST 2 M AMMONIUM SULFATE IN HANGING DROP EXPERIMENTS. THE
TTR LIGAND COMPLEXES WERE PREPARED FROM CRYSTALS SOAKED FOR 2
WEEKS WITH A 10-FOLD MOLAR EXCESS , pH 7.00, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_special_symmetry
struct_site
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2006-03-14
1
1
2008-05-01
1
2
2011-07-13
1
3
2023-08-30
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2006-03-06
REL
NE1
2',3,3',4',5-PENTACHLOROBIPHENYL-4-OL
HOH
water
1BMZ
PDB
experimental model
NEW
501
2
NE1
NE1
501
A
NEW
500
2
NE1
NE1
500
B
HOH
241
3
HOH
HOH
241
A
HOH
242
3
HOH
HOH
242
A
HOH
243
3
HOH
HOH
243
A
HOH
244
3
HOH
HOH
244
A
HOH
246
3
HOH
HOH
246
A
HOH
249
3
HOH
HOH
249
A
HOH
250
3
HOH
HOH
250
A
HOH
253
3
HOH
HOH
253
A
HOH
255
3
HOH
HOH
255
A
HOH
256
3
HOH
HOH
256
A
HOH
260
3
HOH
HOH
260
A
HOH
261
3
HOH
HOH
261
A
HOH
262
3
HOH
HOH
262
A
HOH
264
3
HOH
HOH
264
A
HOH
266
3
HOH
HOH
266
A
HOH
267
3
HOH
HOH
267
A
HOH
269
3
HOH
HOH
269
A
HOH
270
3
HOH
HOH
270
A
HOH
271
3
HOH
HOH
271
A
HOH
275
3
HOH
HOH
275
A
HOH
276
3
HOH
HOH
276
A
HOH
278
3
HOH
HOH
278
A
HOH
279
3
HOH
HOH
279
A
HOH
284
3
HOH
HOH
284
A
HOH
285
3
HOH
HOH
285
A
HOH
286
3
HOH
HOH
286
A
HOH
287
3
HOH
HOH
287
A
HOH
288
3
HOH
HOH
288
A
HOH
289
3
HOH
HOH
289
A
HOH
295
3
HOH
HOH
295
A
HOH
245
3
HOH
HOH
245
B
HOH
247
3
HOH
HOH
247
B
HOH
251
3
HOH
HOH
251
B
HOH
252
3
HOH
HOH
252
B
HOH
254
3
HOH
HOH
254
B
HOH
257
3
HOH
HOH
257
B
HOH
258
3
HOH
HOH
258
B
HOH
259
3
HOH
HOH
259
B
HOH
263
3
HOH
HOH
263
B
HOH
265
3
HOH
HOH
265
B
HOH
268
3
HOH
HOH
268
B
HOH
272
3
HOH
HOH
272
B
HOH
273
3
HOH
HOH
273
B
HOH
274
3
HOH
HOH
274
B
HOH
277
3
HOH
HOH
277
B
HOH
280
3
HOH
HOH
280
B
HOH
281
3
HOH
HOH
281
B
HOH
282
3
HOH
HOH
282
B
HOH
283
3
HOH
HOH
283
B
HOH
293
3
HOH
HOH
293
B
HOH
294
3
HOH
HOH
294
B
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
n
7
7
A
n
8
8
A
n
9
9
A
CYS
10
n
10
CYS
10
A
PRO
11
n
11
PRO
11
A
LEU
12
n
12
LEU
12
A
MET
13
n
13
MET
13
A
VAL
14
n
14
VAL
14
A
LYS
15
n
15
LYS
15
A
VAL
16
n
16
VAL
16
A
LEU
17
n
17
LEU
17
A
ASP
18
n
18
ASP
18
A
ALA
19
n
19
ALA
19
A
VAL
20
n
20
VAL
20
A
ARG
21
n
21
ARG
21
A
GLY
22
n
22
GLY
22
A
SER
23
n
23
SER
23
A
PRO
24
n
24
PRO
24
A
ALA
25
n
25
ALA
25
A
ILE
26
n
26
ILE
26
A
ASN
27
n
27
ASN
27
A
VAL
28
n
28
VAL
28
A
ALA
29
n
29
ALA
29
A
VAL
30
n
30
VAL
30
A
HIS
31
n
31
HIS
31
A
VAL
32
n
32
VAL
32
A
PHE
33
n
33
PHE
33
A
ARG
34
n
34
ARG
34
A
LYS
35
n
35
LYS
35
A
ALA
36
n
36
ALA
36
A
ALA
37
n
37
ALA
37
A
ASP
38
n
38
ASP
38
A
ASP
39
n
39
ASP
39
A
THR
40
n
40
THR
40
A
TRP
41
n
41
TRP
41
A
GLU
42
n
42
GLU
42
A
PRO
43
n
43
PRO
43
A
PHE
44
n
44
PHE
44
A
ALA
45
n
45
ALA
45
A
SER
46
n
46
SER
46
A
GLY
47
n
47
GLY
47
A
LYS
48
n
48
LYS
48
A
THR
49
n
49
THR
49
A
SER
50
n
50
SER
50
A
GLU
51
n
51
GLU
51
A
SER
52
n
52
SER
52
A
GLY
53
n
53
GLY
53
A
GLU
54
n
54
GLU
54
A
LEU
55
n
55
LEU
55
A
HIS
56
n
56
HIS
56
A
GLY
57
n
57
GLY
57
A
LEU
58
n
58
LEU
58
A
THR
59
n
59
THR
59
A
THR
60
n
60
THR
60
A
GLU
61
n
61
GLU
61
A
GLU
62
n
62
GLU
62
A
GLU
63
n
63
GLU
63
A
PHE
64
n
64
PHE
64
A
VAL
65
n
65
VAL
65
A
GLU
66
n
66
GLU
66
A
GLY
67
n
67
GLY
67
A
ILE
68
n
68
ILE
68
A
TYR
69
n
69
TYR
69
A
LYS
70
n
70
LYS
70
A
VAL
71
n
71
VAL
71
A
GLU
72
n
72
GLU
72
A
ILE
73
n
73
ILE
73
A
ASP
74
n
74
ASP
74
A
THR
75
n
75
THR
75
A
LYS
76
n
76
LYS
76
A
SER
77
n
77
SER
77
A
TYR
78
n
78
TYR
78
A
TRP
79
n
79
TRP
79
A
LYS
80
n
80
LYS
80
A
ALA
81
n
81
ALA
81
A
LEU
82
n
82
LEU
82
A
GLY
83
n
83
GLY
83
A
ILE
84
n
84
ILE
84
A
SER
85
n
85
SER
85
A
PRO
86
n
86
PRO
86
A
PHE
87
n
87
PHE
87
A
HIS
88
n
88
HIS
88
A
GLU
89
n
89
GLU
89
A
HIS
90
n
90
HIS
90
A
ALA
91
n
91
ALA
91
A
GLU
92
n
92
GLU
92
A
VAL
93
n
93
VAL
93
A
VAL
94
n
94
VAL
94
A
PHE
95
n
95
PHE
95
A
THR
96
n
96
THR
96
A
ALA
97
n
97
ALA
97
A
ASN
98
n
98
ASN
98
A
ASP
99
n
99
ASP
99
A
SER
100
n
100
SER
100
A
GLY
101
n
101
GLY
101
A
PRO
102
n
102
PRO
102
A
ARG
103
n
103
ARG
103
A
ARG
104
n
104
ARG
104
A
TYR
105
n
105
TYR
105
A
THR
106
n
106
THR
106
A
ILE
107
n
107
ILE
107
A
ALA
108
n
108
ALA
108
A
ALA
109
n
109
ALA
109
A
LEU
110
n
110
LEU
110
A
LEU
111
n
111
LEU
111
A
SER
112
n
112
SER
112
A
PRO
113
n
113
PRO
113
A
TYR
114
n
114
TYR
114
A
SER
115
n
115
SER
115
A
TYR
116
n
116
TYR
116
A
SER
117
n
117
SER
117
A
THR
118
n
118
THR
118
A
THR
119
n
119
THR
119
A
ALA
120
n
120
ALA
120
A
VAL
121
n
121
VAL
121
A
VAL
122
n
122
VAL
122
A
THR
123
n
123
THR
123
A
ASN
124
n
124
ASN
124
A
n
125
125
A
n
126
126
A
n
127
127
A
n
1
1
B
n
2
2
B
n
3
3
B
n
4
4
B
n
5
5
B
n
6
6
B
n
7
7
B
n
8
8
B
n
9
9
B
CYS
10
n
10
CYS
10
B
PRO
11
n
11
PRO
11
B
LEU
12
n
12
LEU
12
B
MET
13
n
13
MET
13
B
VAL
14
n
14
VAL
14
B
LYS
15
n
15
LYS
15
B
VAL
16
n
16
VAL
16
B
LEU
17
n
17
LEU
17
B
ASP
18
n
18
ASP
18
B
ALA
19
n
19
ALA
19
B
VAL
20
n
20
VAL
20
B
ARG
21
n
21
ARG
21
B
GLY
22
n
22
GLY
22
B
SER
23
n
23
SER
23
B
PRO
24
n
24
PRO
24
B
ALA
25
n
25
ALA
25
B
ILE
26
n
26
ILE
26
B
ASN
27
n
27
ASN
27
B
VAL
28
n
28
VAL
28
B
ALA
29
n
29
ALA
29
B
VAL
30
n
30
VAL
30
B
HIS
31
n
31
HIS
31
B
VAL
32
n
32
VAL
32
B
PHE
33
n
33
PHE
33
B
ARG
34
n
34
ARG
34
B
LYS
35
n
35
LYS
35
B
ALA
36
n
36
ALA
36
B
ALA
37
n
37
ALA
37
B
ASP
38
n
38
ASP
38
B
ASP
39
n
39
ASP
39
B
THR
40
n
40
THR
40
B
TRP
41
n
41
TRP
41
B
GLU
42
n
42
GLU
42
B
PRO
43
n
43
PRO
43
B
PHE
44
n
44
PHE
44
B
ALA
45
n
45
ALA
45
B
SER
46
n
46
SER
46
B
GLY
47
n
47
GLY
47
B
LYS
48
n
48
LYS
48
B
THR
49
n
49
THR
49
B
SER
50
n
50
SER
50
B
GLU
51
n
51
GLU
51
B
SER
52
n
52
SER
52
B
GLY
53
n
53
GLY
53
B
GLU
54
n
54
GLU
54
B
LEU
55
n
55
LEU
55
B
HIS
56
n
56
HIS
56
B
GLY
57
n
57
GLY
57
B
LEU
58
n
58
LEU
58
B
THR
59
n
59
THR
59
B
THR
60
n
60
THR
60
B
GLU
61
n
61
GLU
61
B
GLU
62
n
62
GLU
62
B
GLU
63
n
63
GLU
63
B
PHE
64
n
64
PHE
64
B
VAL
65
n
65
VAL
65
B
GLU
66
n
66
GLU
66
B
GLY
67
n
67
GLY
67
B
ILE
68
n
68
ILE
68
B
TYR
69
n
69
TYR
69
B
LYS
70
n
70
LYS
70
B
VAL
71
n
71
VAL
71
B
GLU
72
n
72
GLU
72
B
ILE
73
n
73
ILE
73
B
ASP
74
n
74
ASP
74
B
THR
75
n
75
THR
75
B
LYS
76
n
76
LYS
76
B
SER
77
n
77
SER
77
B
TYR
78
n
78
TYR
78
B
TRP
79
n
79
TRP
79
B
LYS
80
n
80
LYS
80
B
ALA
81
n
81
ALA
81
B
LEU
82
n
82
LEU
82
B
GLY
83
n
83
GLY
83
B
ILE
84
n
84
ILE
84
B
SER
85
n
85
SER
85
B
PRO
86
n
86
PRO
86
B
PHE
87
n
87
PHE
87
B
HIS
88
n
88
HIS
88
B
GLU
89
n
89
GLU
89
B
HIS
90
n
90
HIS
90
B
ALA
91
n
91
ALA
91
B
GLU
92
n
92
GLU
92
B
VAL
93
n
93
VAL
93
B
VAL
94
n
94
VAL
94
B
PHE
95
n
95
PHE
95
B
THR
96
n
96
THR
96
B
ALA
97
n
97
ALA
97
B
ASN
98
n
98
ASN
98
B
ASP
99
n
99
ASP
99
B
SER
100
n
100
SER
100
B
GLY
101
n
101
GLY
101
B
PRO
102
n
102
PRO
102
B
ARG
103
n
103
ARG
103
B
ARG
104
n
104
ARG
104
B
TYR
105
n
105
TYR
105
B
THR
106
n
106
THR
106
B
ILE
107
n
107
ILE
107
B
ALA
108
n
108
ALA
108
B
ALA
109
n
109
ALA
109
B
LEU
110
n
110
LEU
110
B
LEU
111
n
111
LEU
111
B
SER
112
n
112
SER
112
B
PRO
113
n
113
PRO
113
B
TYR
114
n
114
TYR
114
B
SER
115
n
115
SER
115
B
TYR
116
n
116
TYR
116
B
SER
117
n
117
SER
117
B
THR
118
n
118
THR
118
B
THR
119
n
119
THR
119
B
ALA
120
n
120
ALA
120
B
VAL
121
n
121
VAL
121
B
VAL
122
n
122
VAL
122
B
THR
123
n
123
THR
123
B
n
124
124
B
n
125
125
B
n
126
126
B
n
127
127
B
author_and_software_defined_assembly
PISA,PQS
4
tetrameric
8720
-152
17810
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_565
-x,-y+1,z
crystal symmetry operation
0.0000000000
85.4610000000
0.0000000000
A
O
SER
23
A
O
SER
23
A
N
ASP
18
A
N
ASP
18
A
N
MET
13
A
N
MET
13
A
O
ILE
107
A
O
ILE
107
A
N
ALA
108
A
N
ALA
108
A
O
THR
119
A
O
THR
119
A
N
THR
118
A
N
THR
118
B
O
TYR
116
B
O
TYR
116
B
O
SER
117
B
O
SER
117
B
N
LEU
110
B
N
LEU
110
B
O
ILE
107
B
O
ILE
107
B
N
MET
13
B
N
MET
13
B
N
ASP
18
B
N
ASP
18
B
O
SER
23
B
O
SER
23
A
O
LEU
55
A
O
LEU
55
A
N
VAL
14
A
N
VAL
14
A
N
MET
13
A
N
MET
13
A
O
ILE
107
A
O
ILE
107
A
N
ALA
108
A
N
ALA
108
A
O
THR
119
A
O
THR
119
A
N
THR
118
A
N
THR
118
B
O
TYR
116
B
O
TYR
116
B
O
SER
117
B
O
SER
117
B
N
LEU
110
B
N
LEU
110
B
O
ILE
107
B
O
ILE
107
B
N
MET
13
B
N
MET
13
B
N
VAL
14
B
N
VAL
14
B
O
LEU
55
B
O
LEU
55
A
O
ALA
45
A
O
ALA
45
A
N
VAL
32
A
N
VAL
32
A
N
HIS
31
A
N
HIS
31
A
O
GLU
72
A
O
GLU
72
A
N
ILE
73
A
N
ILE
73
A
O
ALA
91
A
O
ALA
91
A
N
VAL
94
A
N
VAL
94
B
O
GLU
89
B
O
GLU
89
B
O
ALA
91
B
O
ALA
91
B
N
ILE
73
B
N
ILE
73
B
O
GLU
72
B
O
GLU
72
B
N
HIS
31
B
N
HIS
31
B
N
VAL
32
B
N
VAL
32
B
O
ALA
45
B
O
ALA
45
1
A
NE1
501
C
NE1
1
A
NE1
501
C
NE1
1
A
NE1
501
C
NE1
1
A
NE1
501
C
NE1
1
A
NE1
501
C
NE1
1
A
NE1
501
C
NE1
1
B
NE1
500
D
NE1
1
B
NE1
500
D
NE1
1
B
NE1
500
D
NE1
1
B
NE1
500
D
NE1
1
B
NE1
500
D
NE1
1
B
NE1
500
D
NE1
1
A
HOH
295
E
HOH
1
B
HOH
294
F
HOH
1
A
GLY
1
A
GLY
1
1
Y
1
A
PRO
2
A
PRO
2
1
Y
1
A
THR
3
A
THR
3
1
Y
1
A
GLY
4
A
GLY
4
1
Y
1
A
THR
5
A
THR
5
1
Y
1
A
GLY
6
A
GLY
6
1
Y
1
A
GLU
7
A
GLU
7
1
Y
1
A
SER
8
A
SER
8
1
Y
1
A
LYS
9
A
LYS
9
1
Y
1
A
PRO
125
A
PRO
125
1
Y
1
A
LYS
126
A
LYS
126
1
Y
1
A
GLU
127
A
GLU
127
1
Y
1
B
GLY
1
B
GLY
1
1
Y
1
B
PRO
2
B
PRO
2
1
Y
1
B
THR
3
B
THR
3
1
Y
1
B
GLY
4
B
GLY
4
1
Y
1
B
THR
5
B
THR
5
1
Y
1
B
GLY
6
B
GLY
6
1
Y
1
B
GLU
7
B
GLU
7
1
Y
1
B
SER
8
B
SER
8
1
Y
1
B
LYS
9
B
LYS
9
1
Y
1
B
ASN
124
B
ASN
124
1
Y
1
B
PRO
125
B
PRO
125
1
Y
1
B
LYS
126
B
LYS
126
1
Y
1
B
GLU
127
B
GLU
127
1
Y
1
A
ALA
37
-54.76
-3.46
1
A
ASP
39
89.12
32.63
1
B
ASP
38
-98.03
40.80
1
B
PHE
44
-130.81
-42.57
1
B
ASP
99
73.95
-21.92
1
B
SER
100
-53.91
99.41
29.503
0.62
0.00
0.00
-0.30
0.00
-0.32
0.952
0.932
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.25745
0.21375
0.21586
0.21586
1.85
27.42
959
18746
17787
5.1
89.65
3.647
0.110
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.179
0.164
0.80
0.80
1.20
1BMZ
MAXIMUM LIKELIHOOD
MASK
1.85
27.42
51
1857
36
0
1770
0.011
0.022
1881
1.496
1.962
2573
5.593
5.000
227
40.347
23.766
77
14.800
15.000
291
14.689
15.000
8
0.085
0.200
294
0.035
0.020
1418
0.238
0.300
694
0.324
0.500
1291
0.170
0.500
171
0.229
0.300
74
0.796
0.500
18
1.253
1.500
1171
1.823
2.000
1879
2.646
3.000
953
3.924
4.500
694
0.278
0.268
1.898
81
1244
20
87.52
1.85
27.42
2G9K
18746
18746
0
0.000
0.036
1
90.5
1.850
1.898
1
87.52
data collection
HKL-2000
data scaling
SCALEPACK
phasing
AMoRE
refinement
REFMAC
5.2.0005
data reduction
HKL-2000
Human Transthyretin (TTR) Complexed with Hydroxylated polychlorinated Biphenyl-4-hydroxy-2',3,3',4',5-Pentachlorobiphenyl
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
ASP
74
A
ASP
74
HELX_P
A
LEU
82
A
LEU
82
1
1
9
B
ASP
74
B
ASP
74
HELX_P
B
LEU
82
B
LEU
82
1
2
9
HORMONE/GROWTH FACTOR
TTR, AMYLOID, TRANSTHYRETIN, HORMONE-GROWTH FACTOR COMPLEX
TTHY_HUMAN
UNP
1
21
P02766
21
147
2G9K
1
127
P02766
A
1
1
127
21
147
2G9K
1
127
P02766
B
1
1
127
8
8
8
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
SER
23
A
SER
23
A
PRO
24
A
PRO
24
A
LEU
12
A
LEU
12
A
ASP
18
A
ASP
18
A
ARG
104
A
ARG
104
A
SER
112
A
SER
112
A
SER
115
A
SER
115
A
THR
123
A
THR
123
B
SER
115
B
SER
115
B
THR
123
B
THR
123
B
ARG
104
B
ARG
104
B
SER
112
B
SER
112
B
LEU
12
B
LEU
12
B
ASP
18
B
ASP
18
B
SER
23
B
SER
23
B
PRO
24
B
PRO
24
A
GLU
54
A
GLU
54
A
LEU
55
A
LEU
55
A
LEU
12
A
LEU
12
A
ASP
18
A
ASP
18
A
ARG
104
A
ARG
104
A
SER
112
A
SER
112
A
SER
115
A
SER
115
A
THR
123
A
THR
123
B
SER
115
B
SER
115
B
THR
123
B
THR
123
B
ARG
104
B
ARG
104
B
SER
112
B
SER
112
B
LEU
12
B
LEU
12
B
ASP
18
B
ASP
18
B
GLU
54
B
GLU
54
B
LEU
55
B
LEU
55
A
TRP
41
A
TRP
41
A
LYS
48
A
LYS
48
A
ALA
29
A
ALA
29
A
LYS
35
A
LYS
35
A
GLY
67
A
GLY
67
A
ILE
73
A
ILE
73
A
HIS
88
A
HIS
88
A
ALA
97
A
ALA
97
B
HIS
88
B
HIS
88
B
ALA
97
B
ALA
97
B
GLY
67
B
GLY
67
B
ILE
73
B
ILE
73
B
ALA
29
B
ALA
29
B
LYS
35
B
LYS
35
B
TRP
41
B
TRP
41
B
LYS
48
B
LYS
48
BINDING SITE FOR RESIDUE NE1 B 500
B
NE1
500
Software
13
BINDING SITE FOR RESIDUE NE1 A 501
A
NE1
501
Software
14
B
LYS
15
B
LYS
15
13
2_565
B
LYS
15
B
LYS
15
13
1_555
B
LEU
17
B
LEU
17
13
2_565
B
LEU
17
B
LEU
17
13
1_555
B
ALA
108
B
ALA
108
13
1_555
B
LEU
110
B
LEU
110
13
1_555
B
LEU
110
B
LEU
110
13
2_565
B
SER
117
B
SER
117
13
1_555
B
SER
117
B
SER
117
13
2_565
B
THR
119
B
THR
119
13
2_565
B
THR
119
B
THR
119
13
1_555
B
HOH
294
F
HOH
13
2_565
B
HOH
294
F
HOH
13
1_555
A
LYS
15
A
LYS
15
14
1_555
A
LYS
15
A
LYS
15
14
2_565
A
LEU
17
A
LEU
17
14
2_565
A
LEU
17
A
LEU
17
14
1_555
A
ALA
108
A
ALA
108
14
1_555
A
ALA
108
A
ALA
108
14
2_565
A
LEU
110
A
LEU
110
14
2_565
A
LEU
110
A
LEU
110
14
1_555
A
SER
117
A
SER
117
14
1_555
A
SER
117
A
SER
117
14
2_565
A
THR
119
A
THR
119
14
2_565
A
THR
119
A
THR
119
14
1_555
A
HOH
295
E
HOH
14
2_565
A
HOH
295
E
HOH
14
1_555
18
P 21 21 2