0.036868 0.000000 0.000000 0.000000 0.018855 0.000000 0.000000 0.000000 0.011459 0.00000 0.00000 0.00000 Ferraro, D.M. Ferraro, D.J. Ramaswamy, S. Robertson, A.D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 27.124 53.035 87.268 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C Y 241 N C Y 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N N N 260 S C N 261 N C N 262 N O N 263 N C N 264 N C N 265 N C N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N O N 282 N O N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 R C N 295 N O N 296 N C N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C Y 312 N C Y 313 N C Y 314 N C Y 315 N C Y 316 N C Y 317 N C N 318 N O N 319 N O N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N N N 332 S C N 333 N C N 334 N O N 335 N C N 336 N C N 337 N C N 338 N O N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing Y 304 N doub Y 305 N sing Y 306 N sing N 307 N sing Y 308 N doub N 309 N sing Y 310 N doub N 311 N sing Y 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N doub N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 359 390 402 10.1016/j.jmb.2006.03.047 16647719 Structures of Ubiquitin Insertion Mutants Support Site-specific Reflex Response to Insertions Hypothesis. 2006 10.2210/pdb2gbj/pdb pdb_00002gbj 100 1 180 cm lens focused ccd CCD 2004-12-17 NOIR-1 Si(111) double crystal SINGLE WAVELENGTH M x-ray 1 1.12711 1.0 4.2.2 ALS 1.12711 SYNCHROTRON ALS BEAMLINE 4.2.2 9033.244 Ubiquitin 2 man polymer 18.015 water 151 nat water no no MQIFVKTLTGGGGGGGGGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR LRGG MQIFVKTLTGGGGGGGGGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR LRGG A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia Escherichia coli sample 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) BL21(DE3) PLASMID pRS 1 1.736554 29.170057 VAPOR DIFFUSION, HANGING DROP 5.9 27-32% PEG 4000, 50 mM Sodium Cacodylate, pH 5.9, VAPOR DIFFUSION, HANGING DROP, temperature 279.15K 279.15 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_ref_seq_dif repository Initial release Version format compliance Version format compliance Data collection Database references Refinement description 1 0 2006-05-16 1 1 2008-05-01 1 2 2011-07-13 1 3 2023-08-30 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details Crystal Structure of the 9-10 MoaD Insertion Mutant of Ubiquitin Crystal Structure of the 35-36 8 Glycine Insertion Mutant of the same protein Crystal Structure of the 35-36 8 Glycine Insertion Mutant of the same protein Crystal Structure of the 35-36 MoaD Insertion Mutant of the same protein RCSB Y RCSB 2006-03-10 REL REL HOH water 1UBQ PDB ENTRY 1UBQ PDB experimental model HOH 1 2 HOH HOH 85 A HOH 2 2 HOH HOH 86 A HOH 3 2 HOH HOH 87 A HOH 5 2 HOH HOH 88 A HOH 6 2 HOH HOH 89 A HOH 7 2 HOH HOH 90 A HOH 8 2 HOH HOH 91 A HOH 9 2 HOH HOH 92 A HOH 11 2 HOH HOH 93 A HOH 14 2 HOH HOH 94 A HOH 15 2 HOH HOH 95 A HOH 17 2 HOH HOH 96 A HOH 18 2 HOH HOH 97 A HOH 19 2 HOH HOH 98 A HOH 21 2 HOH HOH 99 A HOH 22 2 HOH HOH 100 A HOH 24 2 HOH HOH 101 A HOH 25 2 HOH HOH 102 A HOH 26 2 HOH HOH 103 A HOH 27 2 HOH HOH 104 A HOH 30 2 HOH HOH 105 A HOH 31 2 HOH HOH 106 A HOH 32 2 HOH HOH 107 A HOH 33 2 HOH HOH 108 A HOH 34 2 HOH HOH 109 A HOH 36 2 HOH HOH 110 A HOH 39 2 HOH HOH 111 A HOH 43 2 HOH HOH 112 A HOH 44 2 HOH HOH 113 A HOH 47 2 HOH HOH 114 A HOH 48 2 HOH HOH 115 A HOH 50 2 HOH HOH 116 A HOH 51 2 HOH HOH 117 A HOH 52 2 HOH HOH 118 A HOH 55 2 HOH HOH 119 A HOH 56 2 HOH HOH 120 A HOH 57 2 HOH HOH 121 A HOH 59 2 HOH HOH 122 A HOH 61 2 HOH HOH 123 A HOH 64 2 HOH HOH 124 A HOH 66 2 HOH HOH 125 A HOH 67 2 HOH HOH 126 A HOH 71 2 HOH HOH 127 A HOH 72 2 HOH HOH 128 A HOH 73 2 HOH HOH 129 A HOH 74 2 HOH HOH 130 A HOH 75 2 HOH HOH 131 A HOH 78 2 HOH HOH 132 A HOH 79 2 HOH HOH 133 A HOH 81 2 HOH HOH 134 A HOH 83 2 HOH HOH 135 A HOH 84 2 HOH HOH 136 A HOH 85 2 HOH HOH 137 A HOH 86 2 HOH HOH 138 A HOH 90 2 HOH HOH 139 A HOH 93 2 HOH HOH 140 A HOH 94 2 HOH HOH 141 A HOH 97 2 HOH HOH 142 A HOH 98 2 HOH HOH 143 A HOH 101 2 HOH HOH 144 A HOH 103 2 HOH HOH 145 A HOH 104 2 HOH HOH 146 A HOH 106 2 HOH HOH 147 A HOH 108 2 HOH HOH 148 A HOH 109 2 HOH HOH 149 A HOH 110 2 HOH HOH 150 A HOH 111 2 HOH HOH 151 A HOH 112 2 HOH HOH 152 A HOH 120 2 HOH HOH 153 A HOH 123 2 HOH HOH 154 A HOH 124 2 HOH HOH 155 A HOH 130 2 HOH HOH 156 A HOH 132 2 HOH HOH 157 A HOH 135 2 HOH HOH 158 A HOH 136 2 HOH HOH 159 A HOH 138 2 HOH HOH 160 A HOH 140 2 HOH HOH 161 A HOH 146 2 HOH HOH 162 A HOH 148 2 HOH HOH 163 A HOH 151 2 HOH HOH 164 A HOH 4 2 HOH HOH 85 B HOH 10 2 HOH HOH 86 B HOH 12 2 HOH HOH 87 B HOH 13 2 HOH HOH 88 B HOH 16 2 HOH HOH 89 B HOH 20 2 HOH HOH 90 B HOH 23 2 HOH HOH 91 B HOH 28 2 HOH HOH 92 B HOH 29 2 HOH HOH 93 B HOH 35 2 HOH HOH 94 B HOH 37 2 HOH HOH 95 B HOH 38 2 HOH HOH 96 B HOH 40 2 HOH HOH 97 B HOH 41 2 HOH HOH 98 B HOH 42 2 HOH HOH 99 B HOH 45 2 HOH HOH 100 B HOH 46 2 HOH HOH 101 B HOH 49 2 HOH HOH 102 B HOH 53 2 HOH HOH 103 B HOH 54 2 HOH HOH 104 B HOH 58 2 HOH HOH 105 B HOH 60 2 HOH HOH 106 B HOH 62 2 HOH HOH 107 B HOH 63 2 HOH HOH 108 B HOH 65 2 HOH HOH 109 B HOH 68 2 HOH HOH 110 B HOH 69 2 HOH HOH 111 B HOH 70 2 HOH HOH 112 B HOH 76 2 HOH HOH 113 B HOH 77 2 HOH HOH 114 B HOH 80 2 HOH HOH 115 B HOH 82 2 HOH HOH 116 B HOH 87 2 HOH HOH 117 B HOH 89 2 HOH HOH 118 B HOH 91 2 HOH HOH 119 B HOH 92 2 HOH HOH 120 B HOH 95 2 HOH HOH 121 B HOH 96 2 HOH HOH 122 B HOH 99 2 HOH HOH 123 B HOH 100 2 HOH HOH 124 B HOH 102 2 HOH HOH 125 B HOH 105 2 HOH HOH 126 B HOH 107 2 HOH HOH 127 B HOH 113 2 HOH HOH 128 B HOH 114 2 HOH HOH 129 B HOH 115 2 HOH HOH 130 B HOH 116 2 HOH HOH 131 B HOH 117 2 HOH HOH 132 B HOH 118 2 HOH HOH 133 B HOH 121 2 HOH HOH 134 B HOH 122 2 HOH HOH 135 B HOH 125 2 HOH HOH 136 B HOH 126 2 HOH HOH 137 B HOH 128 2 HOH HOH 138 B HOH 129 2 HOH HOH 139 B HOH 133 2 HOH HOH 140 B HOH 134 2 HOH HOH 141 B HOH 137 2 HOH HOH 142 B HOH 139 2 HOH HOH 143 B HOH 141 2 HOH HOH 144 B HOH 142 2 HOH HOH 145 B HOH 143 2 HOH HOH 146 B HOH 144 2 HOH HOH 147 B HOH 145 2 HOH HOH 148 B HOH 147 2 HOH HOH 149 B HOH 149 2 HOH HOH 150 B HOH 150 2 HOH HOH 151 B HOH 153 2 HOH HOH 152 B HOH 154 2 HOH HOH 153 B HOH 156 2 HOH HOH 154 B HOH 160 2 HOH HOH 155 B 0.549 0.447 0.282 0.257 3.000 3.000 15.000 15.000 MET 1 n 1 MET 1 A GLN 2 n 2 GLN 2 A ILE 3 n 3 ILE 3 A PHE 4 n 4 PHE 4 A VAL 5 n 5 VAL 5 A LYS 6 n 6 LYS 6 A THR 7 n 7 THR 7 A LEU 8 n 8 LEU 8 A THR 9 n 9 THR 9 A GLY 10 n 10 GLY 10 A GLY 11 n 11 GLY 11 A GLY 12 n 12 GLY 12 A GLY 13 n 13 GLY 13 A GLY 14 n 14 GLY 14 A GLY 15 n 15 GLY 15 A GLY 16 n 16 GLY 16 A GLY 17 n 17 GLY 17 A GLY 18 n 18 GLY 18 A LYS 19 n 19 LYS 19 A THR 20 n 20 THR 20 A ILE 21 n 21 ILE 21 A THR 22 n 22 THR 22 A LEU 23 n 23 LEU 23 A GLU 24 n 24 GLU 24 A VAL 25 n 25 VAL 25 A GLU 26 n 26 GLU 26 A PRO 27 n 27 PRO 27 A SER 28 n 28 SER 28 A ASP 29 n 29 ASP 29 A THR 30 n 30 THR 30 A ILE 31 n 31 ILE 31 A GLU 32 n 32 GLU 32 A ASN 33 n 33 ASN 33 A VAL 34 n 34 VAL 34 A LYS 35 n 35 LYS 35 A ALA 36 n 36 ALA 36 A LYS 37 n 37 LYS 37 A ILE 38 n 38 ILE 38 A GLN 39 n 39 GLN 39 A ASP 40 n 40 ASP 40 A LYS 41 n 41 LYS 41 A GLU 42 n 42 GLU 42 A GLY 43 n 43 GLY 43 A ILE 44 n 44 ILE 44 A PRO 45 n 45 PRO 45 A PRO 46 n 46 PRO 46 A ASP 47 n 47 ASP 47 A GLN 48 n 48 GLN 48 A GLN 49 n 49 GLN 49 A ARG 50 n 50 ARG 50 A LEU 51 n 51 LEU 51 A ILE 52 n 52 ILE 52 A PHE 53 n 53 PHE 53 A ALA 54 n 54 ALA 54 A GLY 55 n 55 GLY 55 A LYS 56 n 56 LYS 56 A GLN 57 n 57 GLN 57 A LEU 58 n 58 LEU 58 A GLU 59 n 59 GLU 59 A ASP 60 n 60 ASP 60 A GLY 61 n 61 GLY 61 A ARG 62 n 62 ARG 62 A THR 63 n 63 THR 63 A LEU 64 n 64 LEU 64 A SER 65 n 65 SER 65 A ASP 66 n 66 ASP 66 A TYR 67 n 67 TYR 67 A ASN 68 n 68 ASN 68 A ILE 69 n 69 ILE 69 A GLN 70 n 70 GLN 70 A LYS 71 n 71 LYS 71 A GLU 72 n 72 GLU 72 A SER 73 n 73 SER 73 A THR 74 n 74 THR 74 A LEU 75 n 75 LEU 75 A HIS 76 n 76 HIS 76 A LEU 77 n 77 LEU 77 A VAL 78 n 78 VAL 78 A LEU 79 n 79 LEU 79 A ARG 80 n 80 ARG 80 A LEU 81 n 81 LEU 81 A n 82 82 A n 83 83 A n 84 84 A MET 1 n 1 MET 1 B GLN 2 n 2 GLN 2 B ILE 3 n 3 ILE 3 B PHE 4 n 4 PHE 4 B VAL 5 n 5 VAL 5 B LYS 6 n 6 LYS 6 B THR 7 n 7 THR 7 B LEU 8 n 8 LEU 8 B THR 9 n 9 THR 9 B GLY 10 n 10 GLY 10 B GLY 11 n 11 GLY 11 B GLY 12 n 12 GLY 12 B GLY 13 n 13 GLY 13 B GLY 14 n 14 GLY 14 B GLY 15 n 15 GLY 15 B GLY 16 n 16 GLY 16 B GLY 17 n 17 GLY 17 B GLY 18 n 18 GLY 18 B LYS 19 n 19 LYS 19 B THR 20 n 20 THR 20 B ILE 21 n 21 ILE 21 B THR 22 n 22 THR 22 B LEU 23 n 23 LEU 23 B GLU 24 n 24 GLU 24 B VAL 25 n 25 VAL 25 B GLU 26 n 26 GLU 26 B PRO 27 n 27 PRO 27 B SER 28 n 28 SER 28 B ASP 29 n 29 ASP 29 B THR 30 n 30 THR 30 B ILE 31 n 31 ILE 31 B GLU 32 n 32 GLU 32 B ASN 33 n 33 ASN 33 B VAL 34 n 34 VAL 34 B LYS 35 n 35 LYS 35 B ALA 36 n 36 ALA 36 B LYS 37 n 37 LYS 37 B ILE 38 n 38 ILE 38 B GLN 39 n 39 GLN 39 B ASP 40 n 40 ASP 40 B LYS 41 n 41 LYS 41 B GLU 42 n 42 GLU 42 B GLY 43 n 43 GLY 43 B ILE 44 n 44 ILE 44 B PRO 45 n 45 PRO 45 B PRO 46 n 46 PRO 46 B ASP 47 n 47 ASP 47 B GLN 48 n 48 GLN 48 B GLN 49 n 49 GLN 49 B ARG 50 n 50 ARG 50 B LEU 51 n 51 LEU 51 B ILE 52 n 52 ILE 52 B PHE 53 n 53 PHE 53 B ALA 54 n 54 ALA 54 B GLY 55 n 55 GLY 55 B LYS 56 n 56 LYS 56 B GLN 57 n 57 GLN 57 B LEU 58 n 58 LEU 58 B GLU 59 n 59 GLU 59 B ASP 60 n 60 ASP 60 B GLY 61 n 61 GLY 61 B ARG 62 n 62 ARG 62 B THR 63 n 63 THR 63 B LEU 64 n 64 LEU 64 B SER 65 n 65 SER 65 B ASP 66 n 66 ASP 66 B TYR 67 n 67 TYR 67 B ASN 68 n 68 ASN 68 B ILE 69 n 69 ILE 69 B GLN 70 n 70 GLN 70 B LYS 71 n 71 LYS 71 B GLU 72 n 72 GLU 72 B SER 73 n 73 SER 73 B THR 74 n 74 THR 74 B LEU 75 n 75 LEU 75 B HIS 76 n 76 HIS 76 B LEU 77 n 77 LEU 77 B VAL 78 n 78 VAL 78 B LEU 79 n 79 LEU 79 B ARG 80 n 80 ARG 80 B LEU 81 n 81 LEU 81 B ARG 82 n 82 ARG 82 B GLY 83 n 83 GLY 83 B GLY 84 n 84 GLY 84 B author_defined_assembly 1 monomeric author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O LEU 23 A O LEU 23 A N ILE 3 A N ILE 3 A N PHE 4 A N PHE 4 A O LEU 75 A O LEU 75 A O VAL 78 A O VAL 78 A N ARG 50 A N ARG 50 A N PHE 53 A N PHE 53 A O LYS 56 A O LYS 56 B O ILE 21 B O ILE 21 B N VAL 5 B N VAL 5 B N PHE 4 B N PHE 4 B O LEU 75 B O LEU 75 B O HIS 76 B O HIS 76 B N ILE 52 B N ILE 52 B N PHE 53 B N PHE 53 B O LYS 56 B O LYS 56 1 A ARG 82 A ARG 82 1 Y 1 A GLY 83 A GLY 83 1 Y 1 A GLY 84 A GLY 84 1 Y 33.353 0.000 0.000 0.000 -0.590 0.000 0.600 0.962 0.946 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.22589 0.18805 0.18998 0.18998 1.350 33.691 1405 28499 27864 5.000 97.780 2.372 0.047 RANDOM 1 THROUGHOUT 0.00 MOLECULAR REPLACEMENT 0.081 0.072 0.800 0.800 1.400 PDB ENTRY 1UBQ MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 1.350 33.691 151 1410 0 0 1259 0.012 0.022 1272 0.001 0.020 893 1.416 1.998 1706 0.860 3.000 2207 6.042 5.000 163 37.530 26.000 55 13.379 15.000 251 20.878 15.000 7 0.083 0.200 195 0.005 0.020 1402 0.001 0.020 217 0.206 0.200 204 0.188 0.200 932 0.165 0.200 617 0.080 0.200 724 0.165 0.200 106 0.040 0.200 1 0.207 0.200 24 0.243 0.200 86 0.147 0.200 26 1.657 1.500 1054 0.646 1.500 348 1.946 2.000 1294 3.215 3.000 507 4.494 4.500 412 1.921 3.000 1561 2.737 3.000 1260 0.309 0.268 1.385 87 1757 1844 20 89.650 1.350 33.691 2GBJ 28499 27867 0.00 0.00 0.068 0.970 1 10.800 4.980 1050 97.800 0.503 1.35 1.40 2.4 10991 2511 2511 0.850 4.37 90.6 90.60 data scaling Pflugrath, J.W. jwp@RigakuMSC.com Sep 29 2005 http://www.msc.com/protein/dtrek.html d*TREK package 9.5LDz phasing Jorge Navaza ccp4@dl.ac.uk Fortran http://www.ccp4.ac.uk/main.html AMoRE program refinement Murshudov, G.N. ccp4@dl.ac.uk Fortran http://www.ccp4.ac.uk/main.html REFMAC program data extraction PDB sw-help@rcsb.rutgers.edu Nov. 1, 2005 C++ http://pdb.rutgers.edu/software/ PDB_EXTRACT package 1.701 data collection Blu-Ice Crystal Structure of the 9-10 8 Glycine Insertion Mutant of Ubiquitin. 1 N N 1 N N 2 N N 2 N N The monomer is believed to be the active biological assembly. A THR 30 A THR 30 HELX_P A GLY 43 A GLY 43 1 1 14 A PRO 45 A PRO 45 HELX_P A ASP 47 A ASP 47 5 2 3 A LEU 64 A LEU 64 HELX_P A ASN 68 A ASN 68 5 3 5 B THR 30 B THR 30 HELX_P B GLY 43 B GLY 43 1 4 14 B PRO 45 B PRO 45 HELX_P B ASP 47 B ASP 47 5 5 3 B LEU 64 B LEU 64 HELX_P B ASN 68 B ASN 68 5 6 5 PROTEIN BINDING LOOP INSERTION, PROTEIN BINDING B GLY 13 B GLY 13 1 B GLY 14 B GLY 14 -1.04 B GLY 15 B GLY 15 1 B GLY 16 B GLY 16 -14.89 UBIQ_HUMAN UNP 1 1 P62988 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 1 76 2GBJ 1 84 P62988 A 1 1 84 1 76 2GBJ 1 84 P62988 B 1 1 84 1 insertion GLY 10 2GBJ A P62988 UNP 10 1 insertion GLY 11 2GBJ A P62988 UNP 11 1 insertion GLY 12 2GBJ A P62988 UNP 12 1 insertion GLY 13 2GBJ A P62988 UNP 13 1 insertion GLY 14 2GBJ A P62988 UNP 14 1 insertion GLY 15 2GBJ A P62988 UNP 15 1 insertion GLY 16 2GBJ A P62988 UNP 16 1 insertion GLY 17 2GBJ A P62988 UNP 17 2 insertion GLY 10 2GBJ B P62988 UNP 10 2 insertion GLY 11 2GBJ B P62988 UNP 11 2 insertion GLY 12 2GBJ B P62988 UNP 12 2 insertion GLY 13 2GBJ B P62988 UNP 13 2 insertion GLY 14 2GBJ B P62988 UNP 14 2 insertion GLY 15 2GBJ B P62988 UNP 15 2 insertion GLY 16 2GBJ B P62988 UNP 16 2 insertion GLY 17 2GBJ B P62988 UNP 17 5 5 anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A THR 20 A THR 20 A GLU 24 A GLU 24 A GLN 2 A GLN 2 A THR 7 A THR 7 A THR 74 A THR 74 A LEU 79 A LEU 79 A GLN 49 A GLN 49 A PHE 53 A PHE 53 A LYS 56 A LYS 56 A GLN 57 A GLN 57 B THR 20 B THR 20 B GLU 24 B GLU 24 B GLN 2 B GLN 2 B THR 7 B THR 7 B THR 74 B THR 74 B LEU 79 B LEU 79 B GLN 49 B GLN 49 B PHE 53 B PHE 53 B LYS 56 B LYS 56 B GLN 57 B GLN 57 19 P 21 21 21