0.006711 0.000000 0.000000 0.000000 0.019920 0.000000 0.000000 0.000000 0.022026 0.00000 0.00000 0.00000 Pavletich, N.P. Pabo, C.O. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 149.000 50.200 45.400 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Co 2 58.933 COBALT (II) ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N CO N 75 N N N 76 R C N 77 N C N 78 N O N 79 N C N 80 N S N 81 N O N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N O N 90 N P N 91 N O N 92 N O N 93 N O N 94 N C N 95 R C N 96 N O N 97 S C N 98 N O N 99 N C N 100 R C Y 101 N N Y 102 N C Y 103 N N Y 104 N C Y 105 N C N 106 N N Y 107 N N Y 108 N C Y 109 N N Y 110 N C N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N O N 126 N P N 127 N O N 128 N O N 129 N O N 130 N C N 131 R C N 132 N O N 133 S C N 134 N O N 135 N C N 136 R C N 137 N N N 138 N C N 139 N O N 140 N N N 141 N C N 142 N N N 143 N C N 144 N C N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N O N 160 N P N 161 N O N 162 N O N 163 N O N 164 N C N 165 R C N 166 N O N 167 S C N 168 N O N 169 N C N 170 R C Y 171 N N Y 172 N C Y 173 N N Y 174 N C N 175 N C N 176 N O N 177 N N N 178 N C N 179 N N N 180 N N Y 181 N C N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N O N 197 N P N 198 N O N 199 N O N 200 N O N 201 N C N 202 R C N 203 N O N 204 S C N 205 N O N 206 N C N 207 R C N 208 N N N 209 N C N 210 N O N 211 N N N 212 N C N 213 N O N 214 N C N 215 N C N 216 N C N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N N N 233 S C N 234 N C N 235 N O N 236 N C N 237 N C N 238 N C N 239 N O N 240 N N N 241 N O N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N N N 253 S C N 254 N C N 255 N O N 256 N C N 257 N C N 258 N C N 259 N O N 260 N O N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N N N 272 N C N 273 N C N 274 N O N 275 N O N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N N N 282 S C N 283 N C N 284 N O N 285 N C Y 286 N C Y 287 N N Y 288 N C Y 289 N C Y 290 N N N 291 N O N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N O N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 S C N 310 N C N 311 N C N 312 N C N 313 N O N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N N N 328 S C N 329 N C N 330 N O N 331 N C N 332 N C N 333 N C N 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N N N 350 S C N 351 N C N 352 N O N 353 N C N 354 N C N 355 N C N 356 N C N 357 N N N 358 N O N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N N N 375 S C N 376 N C N 377 N O N 378 N C N 379 N C N 380 N S N 381 N C N 382 N O N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N N N 395 S C N 396 N C N 397 N O N 398 N C Y 399 N C Y 400 N C Y 401 N C Y 402 N C Y 403 N C Y 404 N C N 405 N O N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N N N 418 S C N 419 N C N 420 N O N 421 N C N 422 N C N 423 N C N 424 N O N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N N N 435 S C N 436 N C N 437 N O N 438 N C N 439 N O N 440 N O N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N N N 449 S C N 450 N C N 451 N O N 452 R C N 453 N O N 454 N C N 455 N O N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N N N 466 S C N 467 N C N 468 N O N 469 N C Y 470 N C Y 471 N C Y 472 N C Y 473 N N Y 474 N C Y 475 N C Y 476 N C Y 477 N C Y 478 N C N 479 N O N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 491 N H N 492 N N N 493 S C N 494 N C N 495 N O N 496 N C Y 497 N C Y 498 N C Y 499 N C Y 500 N C Y 501 N C Y 502 N C N 503 N O N 504 N O N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N H N 516 N N N 517 S C N 518 N C N 519 N O N 520 N C N 521 N C N 522 N C N 523 N O N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 534 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing Y 289 N sing Y 290 N doub Y 291 N doub N 292 N sing Y 293 N sing N 294 N sing Y 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N doub N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N doub N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N doub N 393 N sing N 394 N sing N 395 N sing N 396 N sing Y 397 N doub Y 398 N sing Y 399 N sing N 400 N sing Y 401 N doub N 402 N sing Y 403 N doub N 404 N sing Y 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N doub N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N doub N 462 N sing N 463 N sing N 464 N sing N 465 N sing Y 466 N doub Y 467 N sing Y 468 N sing N 469 N sing Y 470 N doub Y 471 N sing Y 472 N sing N 473 N sing Y 474 N sing Y 475 N doub N 476 N sing Y 477 N doub N 478 N sing Y 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N doub N 490 N sing N 491 N sing N 492 N sing N 493 N sing Y 494 N doub Y 495 N sing Y 496 N sing N 497 N sing Y 498 N doub N 499 N sing Y 500 N doub N 501 N sing Y 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N doub N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing US Science SCIEAS 0038 0036-8075 261 1701 1707 8378770 Crystal structure of a five-finger GLI-DNA complex: new perspectives on zinc fingers. 1993 10.2210/pdb2gli/pdb pdb_00002gli 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 98.00 1 IMAGE PLATE RIGAKU RAXIS IIC SINGLE WAVELENGTH M x-ray 1 1.0 6452.141 DNA (5'-D(*TP*TP*TP*CP*GP*TP*CP*TP*TP*GP*GP*GP*TP*GP*GP*TP*CP*CP*AP*CP*G)-3') 1 syn polymer 6435.192 DNA (5'-D(*AP*CP*GP*TP*GP*GP*AP*CP*CP*AP*CP*CP*CP*AP*AP*GP*AP*CP*GP*AP*A)-3') 1 syn polymer 18190.590 PROTEIN (FIVE-FINGER GLI) 1 man polymer 58.933 COBALT (II) ION 5 syn non-polymer 18.015 water 44 nat water no no (DT)(DT)(DT)(DC)(DG)(DT)(DC)(DT)(DT)(DG)(DG)(DG)(DT)(DG)(DG)(DT)(DC)(DC)(DA)(DC) (DG) TTTCGTCTTGGGTGGTCCACG C polydeoxyribonucleotide no no (DA)(DC)(DG)(DT)(DG)(DG)(DA)(DC)(DC)(DA)(DC)(DC)(DC)(DA)(DA)(DG)(DA)(DC)(DG)(DA) (DA) ACGTGGACCACCCAAGACGAA D polydeoxyribonucleotide no no ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYS RLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYS RLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample GLI ONCOGENE 9606 Homo sapiens GLI ONCOGENE 562 Escherichia coli 2.69 54.20 VAPOR DIFFUSION, HANGING DROP 7.00 pH 7.00, VAPOR DIFFUSION, HANGING DROP WATER 1 PEG 400 1 MGCL2 1 BIS-TRIS-PROPANE_HCL 1 2.150 1 20 C 2 D 21 -6.160 C_DT2:DA21_D 1 -10.179 0.072 -0.171 -0.649 -4.691 1 20 C 3 D 20 -4.757 C_DT3:DA20_D 2 -13.684 -0.069 0.317 -0.639 -22.807 1 19 C 4 D 19 -8.833 C_DC4:DG19_D 3 -0.621 -0.131 0.662 -0.532 -12.663 1 19 C 5 D 18 -7.036 C_DG5:DC18_D 4 -4.065 1.255 -0.513 -0.691 6.783 1 20 C 6 D 17 -9.709 C_DT6:DA17_D 5 2.647 -0.186 -0.533 -0.479 14.569 1 19 C 7 D 16 -4.495 C_DC7:DG16_D 6 -13.086 0.790 -0.458 -1.056 -1.653 1 20 C 8 D 15 5.432 C_DT8:DA15_D 7 -2.331 -0.279 0.470 -0.622 5.585 1 20 C 9 D 14 -9.488 C_DT9:DA14_D 8 -10.285 -0.793 -0.125 -0.337 0.842 1 C 10 D 13 6.037 C_DG10:DC13_D 9 -1.721 -0.671 0.232 0.136 3.593 1 19 C 11 D 12 6.177 C_DG11:DC12_D 10 -5.756 -0.427 0.765 -0.029 -9.775 1 19 C 12 D 11 -8.560 C_DG12:DC11_D 11 -9.634 0.663 0.401 -0.343 -14.566 1 20 C 13 D 10 2.278 C_DT13:DA10_D 12 -0.692 -0.175 0.311 -0.427 -3.780 1 22 C 14 D 9 -4.867 C_DG14:DC9_D 13 4.639 0.089 -0.438 -0.791 -10.790 1 19 C 15 D 8 2.967 C_DG15:DC8_D 14 -16.628 0.615 -0.364 -0.612 -11.360 1 20 C 16 D 7 -13.303 C_DT16:DA7_D 15 -10.920 -0.697 0.694 -0.305 1.307 1 19 C 17 D 6 -6.193 C_DC17:DG6_D 16 -11.878 0.103 -0.460 -0.559 13.307 1 19 C 18 D 5 -7.449 C_DC18:DG5_D 17 0.866 -0.264 -0.466 -0.691 1.494 1 19 C 20 D 3 3.025 C_DC20:DG3_D 18 -12.409 -1.080 0.462 -0.514 6.096 1 C 21 D 2 -15.610 C_DG21:DC2_D 19 -15.362 -1.713 0.071 -1.154 3.297 30.982 C C 2 3 -11.184 D D 21 20 3.358 -5.910 0.109 -0.351 CC_DT2DT3:DA20DA21_DD 1 -5.337 10.099 29.966 0.522 -1.270 3.903 43.371 C C 3 4 -10.677 D D 20 19 3.888 -7.849 -0.158 -0.405 CC_DT3DC4:DG19DA20_DD 2 -1.974 2.686 42.645 0.369 -0.017 2.801 46.106 C C 4 5 7.234 D D 19 18 2.917 5.619 -0.270 0.056 CC_DC4DG5:DC18DG19_DD 3 9.109 -11.727 44.913 -0.355 1.036 2.679 13.851 C C 5 6 15.801 D D 18 17 2.832 3.757 0.266 -0.038 CC_DG5DT6:DA17DC18_DD 4 -1.292 5.435 13.272 -3.308 -2.188 3.183 40.163 C C 6 7 5.804 D D 17 16 3.165 3.973 0.660 -0.182 CC_DT6DC7:DG16DA17_DD 5 4.154 -6.069 39.767 -0.706 -0.500 3.565 33.835 C C 7 8 5.348 D D 16 15 3.596 3.108 1.343 -0.484 CC_DC7DT8:DA15DG16_DD 6 0.690 -1.187 33.689 -1.382 -2.185 2.494 23.759 C C 8 9 11.764 D D 15 14 2.896 4.745 0.000 -1.151 CC_DT8DT9:DA14DA15_DD 7 6.737 -16.702 22.303 -4.127 1.889 3.386 32.905 C C 9 10 6.562 D D 14 13 3.389 3.707 1.955 -1.029 CC_DT9DG10:DC13DA14_DD 8 2.392 -4.234 32.616 -2.474 -3.026 2.668 33.602 C C 10 11 20.619 D D 13 12 3.020 11.573 -0.737 -0.771 CC_DG10DG11:DC12DC13_DD 9 -7.970 14.200 30.600 -3.063 0.084 3.245 32.854 C C 11 12 0.175 D D 12 11 3.411 0.098 -0.394 -2.625 CC_DG11DG12:DC11DC12_DD 10 7.060 -12.575 32.107 -4.659 1.942 2.934 28.754 C C 12 13 17.091 D D 11 10 3.555 8.332 0.145 -1.581 CC_DG12DT13:DA10DC11_DD 11 4.711 -9.664 27.146 -5.094 0.788 2.903 40.271 C C 13 14 3.487 D D 10 9 2.977 2.394 -0.281 -0.309 CC_DT13DG14:DC9DA10_DD 12 4.785 -6.970 39.928 -0.693 0.897 3.525 30.784 C C 14 15 10.091 D D 9 8 3.715 5.323 0.537 -1.012 CC_DG14DG15:DC8DC9_DD 13 2.905 -5.507 30.195 -3.068 -0.376 3.718 30.318 C C 15 16 7.998 D D 8 7 3.393 4.066 -1.709 -0.284 CC_DG15DT16:DA7DC8_DD 14 -11.707 23.028 27.724 -1.476 0.581 3.138 40.789 C C 16 17 -5.262 D D 7 6 2.972 -3.637 1.358 0.444 CC_DT16DC17:DG6DA7_DD 15 8.741 -12.648 39.720 1.016 -1.035 3.136 27.005 C C 17 18 19.751 D D 6 5 3.078 9.022 -0.623 1.042 CC_DC17DC18:DG5DG6_DD 16 3.701 -8.103 25.214 -0.029 2.261 3.354 41.324 C C 20 21 4.105 D D 3 2 3.235 2.894 -0.360 1.992 CC_DC20DG21:DC2DG3_DD 17 0.816 -1.158 41.219 2.510 0.598 chem_comp_atom chem_comp_bond database_2 pdbx_struct_conn_angle struct_conn struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 1993-11-09 1 1 2008-05-22 1 2 2011-07-13 1 3 2024-02-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id NDB Y NDB 1993-11-09 REL CO COBALT (II) ION HOH water CO 198 4 CO CO 258 A CO 199 4 CO CO 259 A CO 200 4 CO CO 260 A CO 201 4 CO CO 261 A CO 202 4 CO CO 262 A HOH 206 5 HOH HOH 206 C HOH 209 5 HOH HOH 209 C HOH 210 5 HOH HOH 210 C HOH 212 5 HOH HOH 212 C HOH 213 5 HOH HOH 213 C HOH 216 5 HOH HOH 216 C HOH 218 5 HOH HOH 218 C HOH 219 5 HOH HOH 219 C HOH 222 5 HOH HOH 222 C HOH 223 5 HOH HOH 223 C HOH 227 5 HOH HOH 227 C HOH 228 5 HOH HOH 228 C HOH 230 5 HOH HOH 230 C HOH 234 5 HOH HOH 234 C HOH 239 5 HOH HOH 239 C HOH 242 5 HOH HOH 242 C HOH 243 5 HOH HOH 243 C HOH 244 5 HOH HOH 244 C HOH 203 5 HOH HOH 203 D HOH 204 5 HOH HOH 204 D HOH 205 5 HOH HOH 205 D HOH 207 5 HOH HOH 207 D HOH 208 5 HOH HOH 208 D HOH 214 5 HOH HOH 214 D HOH 225 5 HOH HOH 225 D HOH 226 5 HOH HOH 226 D HOH 235 5 HOH HOH 235 D HOH 238 5 HOH HOH 238 D HOH 240 5 HOH HOH 240 D HOH 241 5 HOH HOH 241 D HOH 245 5 HOH HOH 245 D HOH 246 5 HOH HOH 246 D HOH 211 5 HOH HOH 263 A HOH 215 5 HOH HOH 264 A HOH 217 5 HOH HOH 265 A HOH 220 5 HOH HOH 266 A HOH 221 5 HOH HOH 267 A HOH 224 5 HOH HOH 268 A HOH 229 5 HOH HOH 269 A HOH 231 5 HOH HOH 270 A HOH 232 5 HOH HOH 271 A HOH 233 5 HOH HOH 272 A HOH 236 5 HOH HOH 273 A HOH 237 5 HOH HOH 274 A T 1 n 1 DT 1 C T 2 n 2 DT 2 C T 3 n 3 DT 3 C C 4 n 4 DC 4 C G 5 n 5 DG 5 C T 6 n 6 DT 6 C C 7 n 7 DC 7 C T 8 n 8 DT 8 C T 9 n 9 DT 9 C G 10 n 10 DG 10 C G 11 n 11 DG 11 C G 12 n 12 DG 12 C T 13 n 13 DT 13 C G 14 n 14 DG 14 C G 15 n 15 DG 15 C T 16 n 16 DT 16 C C 17 n 17 DC 17 C C 18 n 18 DC 18 C A 19 n 19 DA 19 C C 20 n 20 DC 20 C G 21 n 21 DG 21 C A 51 n 1 DA 1 D C 52 n 2 DC 2 D G 53 n 3 DG 3 D T 54 n 4 DT 4 D G 55 n 5 DG 5 D G 56 n 6 DG 6 D A 57 n 7 DA 7 D C 58 n 8 DC 8 D C 59 n 9 DC 9 D A 60 n 10 DA 10 D C 61 n 11 DC 11 D C 62 n 12 DC 12 D C 63 n 13 DC 13 D A 64 n 14 DA 14 D A 65 n 15 DA 15 D G 66 n 16 DG 16 D A 67 n 17 DA 17 D C 68 n 18 DC 18 D G 69 n 19 DG 19 D A 70 n 20 DA 20 D A 71 n 21 DA 21 D GLU 103 n 1 GLU 103 A THR 104 n 2 THR 104 A ASP 105 n 3 ASP 105 A CYS 106 n 4 CYS 106 A ARG 107 n 5 ARG 107 A TRP 108 n 6 TRP 108 A ASP 109 n 7 ASP 109 A GLY 110 n 8 GLY 110 A CYS 111 n 9 CYS 111 A SER 112 n 10 SER 112 A GLN 113 n 11 GLN 113 A GLU 114 n 12 GLU 114 A PHE 115 n 13 PHE 115 A ASP 116 n 14 ASP 116 A SER 117 n 15 SER 117 A GLN 118 n 16 GLN 118 A GLU 119 n 17 GLU 119 A GLN 120 n 18 GLN 120 A LEU 121 n 19 LEU 121 A VAL 122 n 20 VAL 122 A HIS 123 n 21 HIS 123 A HIS 124 n 22 HIS 124 A ILE 125 n 23 ILE 125 A ASN 126 n 24 ASN 126 A SER 127 n 25 SER 127 A GLU 128 n 26 GLU 128 A HIS 129 n 27 HIS 129 A ILE 130 n 28 ILE 130 A HIS 131 n 29 HIS 131 A GLY 132 n 30 GLY 132 A GLU 133 n 31 GLU 133 A ARG 134 n 32 ARG 134 A LYS 135 n 33 LYS 135 A GLU 136 n 34 GLU 136 A PHE 137 n 35 PHE 137 A VAL 138 n 36 VAL 138 A CYS 139 n 37 CYS 139 A HIS 140 n 38 HIS 140 A TRP 141 n 39 TRP 141 A GLY 142 n 40 GLY 142 A GLY 143 n 41 GLY 143 A CYS 144 n 42 CYS 144 A SER 145 n 43 SER 145 A ARG 146 n 44 ARG 146 A GLU 147 n 45 GLU 147 A LEU 148 n 46 LEU 148 A ARG 149 n 47 ARG 149 A PRO 150 n 48 PRO 150 A PHE 151 n 49 PHE 151 A LYS 152 n 50 LYS 152 A ALA 153 n 51 ALA 153 A GLN 154 n 52 GLN 154 A TYR 155 n 53 TYR 155 A MET 156 n 54 MET 156 A LEU 157 n 55 LEU 157 A VAL 158 n 56 VAL 158 A VAL 159 n 57 VAL 159 A HIS 160 n 58 HIS 160 A MET 161 n 59 MET 161 A ARG 162 n 60 ARG 162 A ARG 163 n 61 ARG 163 A HIS 164 n 62 HIS 164 A THR 165 n 63 THR 165 A GLY 166 n 64 GLY 166 A GLU 167 n 65 GLU 167 A LYS 168 n 66 LYS 168 A PRO 169 n 67 PRO 169 A HIS 170 n 68 HIS 170 A LYS 171 n 69 LYS 171 A CYS 172 n 70 CYS 172 A THR 173 n 71 THR 173 A PHE 174 n 72 PHE 174 A GLU 175 n 73 GLU 175 A GLY 176 n 74 GLY 176 A CYS 177 n 75 CYS 177 A ARG 178 n 76 ARG 178 A LYS 179 n 77 LYS 179 A SER 180 n 78 SER 180 A TYR 181 n 79 TYR 181 A SER 182 n 80 SER 182 A ARG 183 n 81 ARG 183 A LEU 184 n 82 LEU 184 A GLU 185 n 83 GLU 185 A ASN 186 n 84 ASN 186 A LEU 187 n 85 LEU 187 A LYS 188 n 86 LYS 188 A THR 189 n 87 THR 189 A HIS 190 n 88 HIS 190 A LEU 191 n 89 LEU 191 A ARG 192 n 90 ARG 192 A SER 193 n 91 SER 193 A HIS 194 n 92 HIS 194 A THR 195 n 93 THR 195 A GLY 196 n 94 GLY 196 A GLU 197 n 95 GLU 197 A LYS 198 n 96 LYS 198 A PRO 199 n 97 PRO 199 A TYR 200 n 98 TYR 200 A MET 201 n 99 MET 201 A CYS 202 n 100 CYS 202 A GLU 203 n 101 GLU 203 A HIS 204 n 102 HIS 204 A GLU 205 n 103 GLU 205 A GLY 206 n 104 GLY 206 A CYS 207 n 105 CYS 207 A SER 208 n 106 SER 208 A LYS 209 n 107 LYS 209 A ALA 210 n 108 ALA 210 A PHE 211 n 109 PHE 211 A SER 212 n 110 SER 212 A ASN 213 n 111 ASN 213 A ALA 214 n 112 ALA 214 A SER 215 n 113 SER 215 A ASP 216 n 114 ASP 216 A ARG 217 n 115 ARG 217 A ALA 218 n 116 ALA 218 A LYS 219 n 117 LYS 219 A HIS 220 n 118 HIS 220 A GLN 221 n 119 GLN 221 A ASN 222 n 120 ASN 222 A ARG 223 n 121 ARG 223 A THR 224 n 122 THR 224 A HIS 225 n 123 HIS 225 A SER 226 n 124 SER 226 A ASN 227 n 125 ASN 227 A GLU 228 n 126 GLU 228 A LYS 229 n 127 LYS 229 A PRO 230 n 128 PRO 230 A TYR 231 n 129 TYR 231 A VAL 232 n 130 VAL 232 A CYS 233 n 131 CYS 233 A LYS 234 n 132 LYS 234 A LEU 235 n 133 LEU 235 A PRO 236 n 134 PRO 236 A GLY 237 n 135 GLY 237 A CYS 238 n 136 CYS 238 A THR 239 n 137 THR 239 A LYS 240 n 138 LYS 240 A ARG 241 n 139 ARG 241 A TYR 242 n 140 TYR 242 A THR 243 n 141 THR 243 A ASP 244 n 142 ASP 244 A PRO 245 n 143 PRO 245 A SER 246 n 144 SER 246 A SER 247 n 145 SER 247 A LEU 248 n 146 LEU 248 A ARG 249 n 147 ARG 249 A LYS 250 n 148 LYS 250 A HIS 251 n 149 HIS 251 A VAL 252 n 150 VAL 252 A LYS 253 n 151 LYS 253 A THR 254 n 152 THR 254 A VAL 255 n 153 VAL 255 A HIS 256 n 154 HIS 256 A GLY 257 n 155 GLY 257 A author_defined_assembly 3 trimeric A CYS 106 C SG CYS 4 1_555 A CO 258 D CO CO 1_555 A CYS 111 C SG CYS 9 1_555 100.6 A CYS 106 C SG CYS 4 1_555 A CO 258 D CO CO 1_555 A HIS 124 C NE2 HIS 22 1_555 95.7 A CYS 111 C SG CYS 9 1_555 A CO 258 D CO CO 1_555 A HIS 124 C NE2 HIS 22 1_555 112.4 A CYS 106 C SG CYS 4 1_555 A CO 258 D CO CO 1_555 A HIS 129 C NE2 HIS 27 1_555 98.1 A CYS 111 C SG CYS 9 1_555 A CO 258 D CO CO 1_555 A HIS 129 C NE2 HIS 27 1_555 147.9 A HIS 124 C NE2 HIS 22 1_555 A CO 258 D CO CO 1_555 A HIS 129 C NE2 HIS 27 1_555 91.3 A CYS 139 C SG CYS 37 1_555 A CO 259 E CO CO 1_555 A CYS 144 C SG CYS 42 1_555 115.8 A CYS 139 C SG CYS 37 1_555 A CO 259 E CO CO 1_555 A HIS 160 C NE2 HIS 58 1_555 104.7 A CYS 144 C SG CYS 42 1_555 A CO 259 E CO CO 1_555 A HIS 160 C NE2 HIS 58 1_555 106.7 A CYS 139 C SG CYS 37 1_555 A CO 259 E CO CO 1_555 A HIS 164 C NE2 HIS 62 1_555 96.4 A CYS 144 C SG CYS 42 1_555 A CO 259 E CO CO 1_555 A HIS 164 C NE2 HIS 62 1_555 120.3 A HIS 160 C NE2 HIS 58 1_555 A CO 259 E CO CO 1_555 A HIS 164 C NE2 HIS 62 1_555 111.9 A CYS 172 C SG CYS 70 1_555 A CO 260 F CO CO 1_555 A CYS 177 C SG CYS 75 1_555 102.7 A CYS 172 C SG CYS 70 1_555 A CO 260 F CO CO 1_555 A HIS 190 C NE2 HIS 88 1_555 98.1 A CYS 177 C SG CYS 75 1_555 A CO 260 F CO CO 1_555 A HIS 190 C NE2 HIS 88 1_555 119.5 A CYS 172 C SG CYS 70 1_555 A CO 260 F CO CO 1_555 A HIS 194 C NE2 HIS 92 1_555 115.9 A CYS 177 C SG CYS 75 1_555 A CO 260 F CO CO 1_555 A HIS 194 C NE2 HIS 92 1_555 111.7 A HIS 190 C NE2 HIS 88 1_555 A CO 260 F CO CO 1_555 A HIS 194 C NE2 HIS 92 1_555 108.4 A CYS 202 C SG CYS 100 1_555 A CO 261 G CO CO 1_555 A CYS 207 C SG CYS 105 1_555 123.5 A CYS 202 C SG CYS 100 1_555 A CO 261 G CO CO 1_555 A HIS 220 C NE2 HIS 118 1_555 96.6 A CYS 207 C SG CYS 105 1_555 A CO 261 G CO CO 1_555 A HIS 220 C NE2 HIS 118 1_555 106.8 A CYS 202 C SG CYS 100 1_555 A CO 261 G CO CO 1_555 A HIS 225 C NE2 HIS 123 1_555 122.3 A CYS 207 C SG CYS 105 1_555 A CO 261 G CO CO 1_555 A HIS 225 C NE2 HIS 123 1_555 107.2 A HIS 220 C NE2 HIS 118 1_555 A CO 261 G CO CO 1_555 A HIS 225 C NE2 HIS 123 1_555 92.9 A CYS 233 C SG CYS 131 1_555 A CO 262 H CO CO 1_555 A CYS 238 C SG CYS 136 1_555 105.9 A CYS 233 C SG CYS 131 1_555 A CO 262 H CO CO 1_555 A HIS 251 C NE2 HIS 149 1_555 130.7 A CYS 238 C SG CYS 136 1_555 A CO 262 H CO CO 1_555 A HIS 251 C NE2 HIS 149 1_555 107.2 A CYS 233 C SG CYS 131 1_555 A CO 262 H CO CO 1_555 A HIS 256 C NE2 HIS 154 1_555 118.3 A CYS 238 C SG CYS 136 1_555 A CO 262 H CO CO 1_555 A HIS 256 C NE2 HIS 154 1_555 113.0 A HIS 251 C NE2 HIS 149 1_555 A CO 262 H CO CO 1_555 A HIS 256 C NE2 HIS 154 1_555 79.7 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O TYR 200 C O TYR 98 A N PHE 211 C N PHE 109 A N TYR 231 C N TYR 129 A O TYR 242 C O TYR 140 1 A CA HIS 131 PLANAR 1 A CA LYS 152 PLANAR 1 C D O6 N3 DG DC 21 2 2.01 1 A A N O CYS LYS 202 209 2.08 1 C D N6 O4 DA DT 19 4 2.10 1 A A OD1 NE2 ASP GLN 116 120 2.14 1 C D N1 N3 DA DT 19 4 2.17 1 A A N NH2 GLU ARG 103 107 2.17 1 A A O N HIS LYS 251 253 2.19 1 C D O6 N4 DG DC 14 9 2.19 1 C DT 9 0.067 SIDE CHAIN 1 C DG 10 0.097 SIDE CHAIN 1 C DG 14 0.069 SIDE CHAIN 1 C DG 15 0.070 SIDE CHAIN 1 C DT 16 0.070 SIDE CHAIN 1 C DC 17 0.060 SIDE CHAIN 1 D DG 3 0.065 SIDE CHAIN 1 D DG 6 0.082 SIDE CHAIN 1 D DA 7 0.076 SIDE CHAIN 1 D DC 13 0.063 SIDE CHAIN 1 D DG 16 0.070 SIDE CHAIN 1 D DG 19 0.051 SIDE CHAIN 1 -3.53 0.40 104.50 100.97 C C C O4' C4' C3' DT DT DT 1 1 1 N 1 3.75 0.60 119.90 123.65 C C C N3 C4 O4 DT DT DT 2 2 2 N 1 2.18 0.30 108.30 110.48 C C C O4' C1' N1 DT DT DT 3 3 3 N 1 -7.97 0.80 109.40 101.43 C C C O5' C5' C4' DC DC DC 4 4 4 N 1 -2.69 0.40 104.50 101.81 C C C O4' C4' C3' DC DC DC 4 4 4 N 1 6.01 0.30 108.30 114.31 C C C O4' C1' N1 DC DC DC 4 4 4 N 1 5.06 0.30 108.30 113.36 C C C O4' C1' N1 DT DT DT 6 6 6 N 1 20.77 1.20 119.70 140.47 C C C C3' O3' P DT DT DC 6 6 7 Y 1 -4.41 0.70 102.20 97.79 C C C C4' C3' C2' DC DC DC 7 7 7 N 1 3.14 0.30 108.30 111.44 C C C O4' C1' N1 DC DC DC 7 7 7 N 1 11.10 1.20 119.70 130.80 C C C C3' O3' P DC DC DT 7 7 8 Y 1 -19.68 1.60 120.90 101.22 C C C P O5' C5' DT DT DT 8 8 8 N 1 5.31 0.30 108.30 113.61 C C C O4' C1' N1 DT DT DT 9 9 9 N 1 -5.53 0.80 105.90 100.37 C C C O4' C1' C2' DG DG DG 10 10 10 N 1 7.65 0.30 108.30 115.95 C C C O4' C1' N9 DG DG DG 10 10 10 N 1 -4.66 0.40 104.50 99.84 C C C O4' C4' C3' DG DG DG 11 11 11 N 1 -6.25 0.70 102.20 95.95 C C C C4' C3' C2' DG DG DG 11 11 11 N 1 6.16 0.30 108.30 114.46 C C C O4' C1' N9 DG DG DG 11 11 11 N 1 -4.17 0.40 110.80 106.63 C C C C4 C5 N7 DG DG DG 11 11 11 N 1 3.02 0.50 104.30 107.32 C C C C5 N7 C8 DG DG DG 11 11 11 N 1 -3.22 0.40 106.40 103.18 C C C C8 N9 C4 DG DG DG 11 11 11 N 1 4.37 0.40 105.40 109.77 C C C N9 C4 C5 DG DG DG 11 11 11 N 1 3.76 0.60 130.40 134.16 C C C C6 C5 N7 DG DG DG 11 11 11 N 1 9.68 1.30 127.00 136.68 C C C C8 N9 C1' DG DG DG 11 11 11 N 1 -13.69 1.60 120.90 107.21 C C C P O5' C5' DG DG DG 12 12 12 N 1 2.38 0.30 108.30 110.68 C C C O4' C1' N9 DG DG DG 12 12 12 N 1 -7.14 0.60 119.90 112.76 C C C N1 C6 O6 DG DG DG 12 12 12 N 1 4.98 0.60 128.60 133.58 C C C C5 C6 O6 DG DG DG 12 12 12 N 1 -14.39 1.60 120.90 106.51 C C C P O5' C5' DT DT DT 13 13 13 N 1 2.73 0.30 108.30 111.03 C C C O4' C1' N1 DT DT DT 13 13 13 N 1 -5.86 0.70 108.00 102.14 C C C O4' C1' N9 DG DG DG 14 14 14 N 1 8.73 1.20 119.70 128.43 C C C C3' O3' P DG DG DG 14 14 15 Y 1 -5.36 0.70 108.00 102.64 C C C O4' C1' N9 DG DG DG 15 15 15 N 1 -3.80 0.60 128.60 124.80 C C C C5 C6 O6 DG DG DG 15 15 15 N 1 5.69 0.30 108.30 113.99 C C C O4' C1' N1 DC DC DC 17 17 17 N 1 2.53 0.40 120.30 122.83 C C C C6 N1 C2 DC DC DC 18 18 18 N 1 4.47 0.30 108.30 112.77 C C C O4' C1' N9 DA DA DA 19 19 19 N 1 3.80 0.60 118.60 122.40 C C C N1 C6 N6 DA DA DA 19 19 19 N 1 10.98 1.20 119.70 130.68 C C C C3' O3' P DA DA DC 19 19 20 Y 1 5.68 0.30 108.30 113.98 C C C O4' C1' N1 DC DC DC 20 20 20 N 1 -2.61 0.40 120.30 117.69 C C C C6 N1 C2 DC DC DC 20 20 20 N 1 -2.56 0.40 121.90 119.34 C C C N3 C4 C5 DC DC DC 20 20 20 N 1 -6.25 1.00 110.10 103.85 C C C C1' O4' C4' DG DG DG 21 21 21 N 1 3.18 0.30 108.30 111.48 C C C O4' C1' N9 DG DG DG 21 21 21 N 1 -5.21 0.70 119.90 114.69 C C C N3 C2 N2 DG DG DG 21 21 21 N 1 8.09 1.10 109.80 117.89 D D D C5' C4' O4' DA DA DA 1 1 1 N 1 4.01 0.30 108.30 112.31 D D D O4' C1' N1 DC DC DC 2 2 2 N 1 -4.92 0.80 102.40 97.48 D D D C3' C2' C1' DT DT DT 4 4 4 N 1 -5.17 0.80 105.90 100.73 D D D O4' C1' C2' DT DT DT 4 4 4 N 1 1.82 0.30 108.30 110.12 D D D O4' C1' N1 DT DT DT 4 4 4 N 1 3.53 0.30 108.30 111.83 D D D O4' C1' N9 DG DG DG 6 6 6 N 1 6.57 0.30 108.30 114.87 D D D O4' C1' N9 DA DA DA 7 7 7 N 1 1.88 0.30 108.30 110.18 D D D O4' C1' N1 DC DC DC 8 8 8 N 1 10.03 1.20 119.70 129.73 D D D C3' O3' P DC DC DC 8 8 9 Y 1 -3.21 0.40 104.50 101.29 D D D O4' C4' C3' DC DC DC 9 9 9 N 1 3.56 0.30 108.30 111.86 D D D O4' C1' N1 DC DC DC 9 9 9 N 1 3.29 0.30 108.30 111.59 D D D O4' C1' N9 DA DA DA 10 10 10 N 1 -2.88 0.40 104.50 101.62 D D D O4' C4' C3' DC DC DC 11 11 11 N 1 -13.88 1.00 110.10 96.22 D D D C1' O4' C4' DC DC DC 11 11 11 N 1 -6.71 0.80 102.40 95.69 D D D C3' C2' C1' DC DC DC 11 11 11 N 1 3.41 0.40 120.30 123.71 D D D C6 N1 C2 DC DC DC 11 11 11 N 1 -5.71 0.80 109.40 103.69 D D D O5' C5' C4' DC DC DC 12 12 12 N 1 -7.78 0.40 104.50 96.72 D D D O4' C4' C3' DC DC DC 12 12 12 N 1 -11.07 1.00 110.10 99.03 D D D C1' O4' C4' DC DC DC 12 12 12 N 1 -7.93 0.80 105.90 97.97 D D D O4' C1' C2' DC DC DC 12 12 12 N 1 -5.93 0.70 108.00 102.07 D D D O4' C1' N1 DC DC DC 12 12 12 N 1 -3.04 0.50 119.90 116.86 D D D C2 N3 C4 DC DC DC 12 12 12 N 1 -4.85 0.70 118.00 113.15 D D D N3 C4 N4 DC DC DC 12 12 12 N 1 3.31 0.30 108.30 111.61 D D D O4' C1' N1 DC DC DC 13 13 13 N 1 -3.70 0.60 118.90 115.20 D D D N1 C2 O2 DC DC DC 13 13 13 N 1 4.66 0.70 121.90 126.56 D D D N3 C2 O2 DC DC DC 13 13 13 N 1 -7.42 1.10 118.80 111.38 D D D C2 N1 C1' DC DC DC 13 13 13 N 1 -12.14 1.90 104.00 91.86 D D D O3' P O5' DC DA DA 13 14 14 Y 1 -6.21 0.40 104.50 98.29 D D D O4' C4' C3' DA DA DA 15 15 15 N 1 6.90 0.30 108.30 115.20 D D D O4' C1' N9 DA DA DA 15 15 15 N 1 12.89 1.20 119.70 132.59 D D D C3' O3' P DA DA DG 15 15 16 Y 1 -6.59 0.40 104.50 97.91 D D D O4' C4' C3' DG DG DG 16 16 16 N 1 -6.53 0.70 108.00 101.47 D D D O4' C1' N9 DG DG DG 16 16 16 N 1 -8.98 1.20 119.70 110.72 D D D C3' O3' P DG DG DA 16 16 17 Y 1 -7.89 0.70 102.20 94.31 D D D C4' C3' C2' DA DA DA 17 17 17 N 1 -4.51 0.70 102.20 97.69 D D D C4' C3' C2' DC DC DC 18 18 18 N 1 -5.24 0.80 102.40 97.16 D D D C3' C2' C1' DC DC DC 18 18 18 N 1 3.27 0.30 108.30 111.57 D D D O4' C1' N1 DC DC DC 18 18 18 N 1 -3.88 0.60 118.90 115.02 D D D N1 C2 O2 DC DC DC 18 18 18 N 1 11.84 1.20 119.70 131.54 D D D C3' O3' P DC DC DG 18 18 19 Y 1 -5.30 0.80 109.40 104.10 D D D O5' C5' C4' DG DG DG 19 19 19 N 1 -6.44 1.00 110.10 103.66 D D D C1' O4' C4' DA DA DA 21 21 21 N 1 -6.16 0.80 105.90 99.74 D D D O4' C1' C2' DA DA DA 21 21 21 N 1 7.16 0.30 108.30 115.46 D D D O4' C1' N9 DA DA DA 21 21 21 N 1 3.74 0.50 120.30 124.04 A A A NE CZ NH1 ARG ARG ARG 107 107 107 N 1 5.41 0.90 118.30 123.71 A A A CB CG OD1 ASP ASP ASP 109 109 109 N 1 -5.93 0.90 118.30 112.37 A A A CB CG OD2 ASP ASP ASP 116 116 116 N 1 8.21 1.10 114.20 122.41 A A A CA CB SG CYS CYS CYS 139 139 139 N 1 4.36 0.50 120.30 124.66 A A A NE CZ NH1 ARG ARG ARG 149 149 149 N 1 11.15 1.80 110.60 121.75 A A A N CA CB LYS LYS LYS 152 152 152 N 1 15.77 2.00 110.40 126.17 A A A CB CA C GLN GLN GLN 154 154 154 N 1 12.41 1.90 110.30 122.71 A A A N CA CB THR THR THR 165 165 165 N 1 -9.95 1.50 110.50 100.55 A A A N CA CB SER SER SER 182 182 182 N 1 12.44 2.00 110.40 122.84 A A A CB CA C ARG ARG ARG 183 183 183 N 1 3.03 0.50 120.30 123.33 A A A NE CZ NH1 ARG ARG ARG 192 192 192 N 1 -5.36 0.50 120.30 114.94 A A A NE CZ NH2 ARG ARG ARG 192 192 192 N 1 9.16 1.50 110.80 119.96 A A A N CA CB CYS CYS CYS 202 202 202 N 1 12.04 1.80 110.60 122.64 A A A N CA CB GLU GLU GLU 203 203 203 N 1 -6.09 0.90 118.30 112.21 A A A CB CG OD2 ASP ASP ASP 216 216 216 N 1 14.44 2.10 111.80 126.24 A A A CG CD NE ARG ARG ARG 223 223 223 N 1 10.22 1.40 123.60 133.82 A A A CD NE CZ ARG ARG ARG 223 223 223 N 1 3.14 0.50 120.30 123.44 A A A NE CZ NH1 ARG ARG ARG 241 241 241 N 1 -3.47 0.50 120.30 116.83 A A A NE CZ NH2 ARG ARG ARG 241 241 241 N 1 3.65 0.60 121.00 124.65 A A A CB CG CD1 TYR TYR TYR 242 242 242 N 1 3.45 0.50 120.30 123.75 A A A NE CZ NH1 ARG ARG ARG 249 249 249 N 1 C C N9 C4 DG DG 11 11 0.055 0.008 1.375 1.430 N 1 C C C6 N1 DG DG 12 12 -0.043 0.007 1.391 1.348 N 1 C C O3' C3' DT DT 13 13 -0.045 0.006 1.419 1.374 N 1 C C O3' C3' DG DG 14 14 -0.072 0.006 1.419 1.347 N 1 D D C5' C4' DA DA 1 1 0.043 0.007 1.512 1.555 N 1 D D O3' C3' DT DT 4 4 -0.039 0.006 1.419 1.380 N 1 D D O3' C3' DA DA 7 7 -0.046 0.006 1.419 1.373 N 1 D D C1' N1 DC DC 11 11 -0.102 0.014 1.468 1.366 N 1 D D N1 C6 DC DC 12 12 -0.058 0.006 1.367 1.309 N 1 D D O3' C3' DC DC 13 13 -0.082 0.006 1.419 1.337 N 1 D D C1' N1 DC DC 13 13 -0.088 0.014 1.468 1.380 N 1 A A CD OE2 GLU GLU 103 103 0.068 0.011 1.252 1.320 N 1 A A CD OE2 GLU GLU 119 119 0.083 0.011 1.252 1.335 N 1 A A CD OE2 GLU GLU 133 133 0.069 0.011 1.252 1.321 N 1 A A CD OE2 GLU GLU 136 136 0.068 0.011 1.252 1.320 N 1 A A CD OE2 GLU GLU 147 147 0.075 0.011 1.252 1.327 N 1 A A CD OE2 GLU GLU 203 203 0.077 0.011 1.252 1.329 N 1 A A CD OE2 GLU GLU 205 205 0.079 0.011 1.252 1.331 N 1 A A CD OE2 GLU GLU 228 228 0.074 0.011 1.252 1.326 N 1 C D N3 N1 DT DA 1 1 2.03 1_555 1_544 1 C D O4 N6 DT DA 1 1 2.19 1_555 1_544 1 A THR 104 67.52 61.49 1 A ASP 105 163.15 116.62 1 A ASP 109 -43.34 108.21 1 A GLU 133 25.70 142.36 1 A GLU 136 64.54 127.27 1 A HIS 140 -143.65 59.10 1 A SER 145 -42.10 12.52 1 A GLU 147 39.18 -91.22 1 A ARG 149 -64.16 87.86 1 A PRO 150 -45.61 155.73 1 A VAL 158 -33.56 -38.27 1 A ARG 162 -44.92 -13.45 1 A ARG 163 -68.60 -85.81 1 A PHE 174 -33.12 110.03 1 A ASN 186 -53.15 -73.69 1 A LEU 187 -38.10 -37.22 1 A HIS 190 -35.49 -37.05 1 A GLU 197 -47.40 106.63 1 A LYS 198 -108.63 60.63 1 A PRO 199 -49.33 -5.94 1 A HIS 204 155.55 142.43 1 A GLU 205 61.76 -43.48 1 A LYS 219 -54.72 -97.22 1 A HIS 220 -11.54 -56.22 1 A SER 226 -50.65 -72.01 1 A ASN 227 76.11 -66.36 1 A LYS 234 -110.85 54.21 1 A CYS 238 -130.19 -72.07 1 A LEU 248 -58.13 -84.35 1 A ARG 249 -12.06 -49.91 1 A VAL 252 -58.99 54.43 1 A LYS 253 171.19 -25.63 1 A VAL 255 -76.84 -104.14 1 A HIS 256 -51.06 -152.90 0.2280000 2.600 7.000 9187 1 2.000 2.600 7.000 44 2174 5 855 1270 0.015 3.070 2.600 2GLI 28039 10856 1 refinement TNT FIVE-FINGER GLI/DNA COMPLEX 1 N N 2 N N 3 N N 4 N N 4 N N 4 N N 4 N N 4 N N 5 N N 5 N N 5 N N A SER 117 C SER 15 HELX_P A HIS 129 C HIS 27 1 1 13 A ALA 153 C ALA 51 HELX_P A MET 161 C MET 59 1 2 9 A MET 161 C MET 59 HELX_P A GLY 166 C GLY 64 1 3 6 A ARG 183 C ARG 81 HELX_P A HIS 194 C HIS 92 1 4 12 A ARG 217 C ARG 115 HELX_P A THR 224 C THR 122 1 5 8 A ASP 244 C ASP 142 HELX_P A HIS 251 C HIS 149 1 6 8 metalc 2.275 A CYS 106 C SG CYS 4 1_555 A CO 258 D CO CO 1_555 metalc 2.114 A CYS 111 C SG CYS 9 1_555 A CO 258 D CO CO 1_555 metalc 2.063 A HIS 124 C NE2 HIS 22 1_555 A CO 258 D CO CO 1_555 metalc 1.991 A HIS 129 C NE2 HIS 27 1_555 A CO 258 D CO CO 1_555 metalc 2.278 A CYS 139 C SG CYS 37 1_555 A CO 259 E CO CO 1_555 metalc 2.602 A CYS 144 C SG CYS 42 1_555 A CO 259 E CO CO 1_555 metalc 2.014 A HIS 160 C NE2 HIS 58 1_555 A CO 259 E CO CO 1_555 metalc 1.924 A HIS 164 C NE2 HIS 62 1_555 A CO 259 E CO CO 1_555 metalc 2.326 A CYS 172 C SG CYS 70 1_555 A CO 260 F CO CO 1_555 metalc 1.999 A CYS 177 C SG CYS 75 1_555 A CO 260 F CO CO 1_555 metalc 2.039 A HIS 190 C NE2 HIS 88 1_555 A CO 260 F CO CO 1_555 metalc 1.689 A HIS 194 C NE2 HIS 92 1_555 A CO 260 F CO CO 1_555 metalc 2.329 A CYS 202 C SG CYS 100 1_555 A CO 261 G CO CO 1_555 metalc 2.218 A CYS 207 C SG CYS 105 1_555 A CO 261 G CO CO 1_555 metalc 2.053 A HIS 220 C NE2 HIS 118 1_555 A CO 261 G CO CO 1_555 metalc 2.292 A HIS 225 C NE2 HIS 123 1_555 A CO 261 G CO CO 1_555 metalc 2.212 A CYS 233 C SG CYS 131 1_555 A CO 262 H CO CO 1_555 metalc 2.609 A CYS 238 C SG CYS 136 1_555 A CO 262 H CO CO 1_555 metalc 2.012 A HIS 251 C NE2 HIS 149 1_555 A CO 262 H CO CO 1_555 metalc 1.435 A HIS 256 C NE2 HIS 154 1_555 A CO 262 H CO CO 1_555 hydrog WATSON-CRICK C DT 2 A N3 DT 2 1_555 D DA 21 B N1 DA 21 1_555 hydrog WATSON-CRICK C DT 2 A O4 DT 2 1_555 D DA 21 B N6 DA 21 1_555 hydrog WATSON-CRICK C DT 3 A N3 DT 3 1_555 D DA 20 B N1 DA 20 1_555 hydrog WATSON-CRICK C DT 3 A O4 DT 3 1_555 D DA 20 B N6 DA 20 1_555 hydrog WATSON-CRICK C DC 4 A N3 DC 4 1_555 D DG 19 B N1 DG 19 1_555 hydrog WATSON-CRICK C DC 4 A N4 DC 4 1_555 D DG 19 B O6 DG 19 1_555 hydrog WATSON-CRICK C DC 4 A O2 DC 4 1_555 D DG 19 B N2 DG 19 1_555 hydrog WATSON-CRICK C DG 5 A N1 DG 5 1_555 D DC 18 B N3 DC 18 1_555 hydrog WATSON-CRICK C DG 5 A N2 DG 5 1_555 D DC 18 B O2 DC 18 1_555 hydrog WATSON-CRICK C DG 5 A O6 DG 5 1_555 D DC 18 B N4 DC 18 1_555 hydrog WATSON-CRICK C DT 6 A N3 DT 6 1_555 D DA 17 B N1 DA 17 1_555 hydrog WATSON-CRICK C DT 6 A O4 DT 6 1_555 D DA 17 B N6 DA 17 1_555 hydrog WATSON-CRICK C DC 7 A N3 DC 7 1_555 D DG 16 B N1 DG 16 1_555 hydrog WATSON-CRICK C DC 7 A N4 DC 7 1_555 D DG 16 B O6 DG 16 1_555 hydrog WATSON-CRICK C DC 7 A O2 DC 7 1_555 D DG 16 B N2 DG 16 1_555 hydrog WATSON-CRICK C DT 8 A N3 DT 8 1_555 D DA 15 B N1 DA 15 1_555 hydrog WATSON-CRICK C DT 8 A O4 DT 8 1_555 D DA 15 B N6 DA 15 1_555 hydrog WATSON-CRICK C DT 9 A N3 DT 9 1_555 D DA 14 B N1 DA 14 1_555 hydrog WATSON-CRICK C DT 9 A O4 DT 9 1_555 D DA 14 B N6 DA 14 1_555 hydrog DG-DC PAIR C DG 10 A N1 DG 10 1_555 D DC 13 B N3 DC 13 1_555 hydrog WATSON-CRICK C DG 11 A N1 DG 11 1_555 D DC 12 B N3 DC 12 1_555 hydrog WATSON-CRICK C DG 11 A N2 DG 11 1_555 D DC 12 B O2 DC 12 1_555 hydrog WATSON-CRICK C DG 11 A O6 DG 11 1_555 D DC 12 B N4 DC 12 1_555 hydrog WATSON-CRICK C DG 12 A N1 DG 12 1_555 D DC 11 B N3 DC 11 1_555 hydrog WATSON-CRICK C DG 12 A N2 DG 12 1_555 D DC 11 B O2 DC 11 1_555 hydrog WATSON-CRICK C DG 12 A O6 DG 12 1_555 D DC 11 B N4 DC 11 1_555 hydrog WATSON-CRICK C DT 13 A N3 DT 13 1_555 D DA 10 B N1 DA 10 1_555 hydrog WATSON-CRICK C DT 13 A O4 DT 13 1_555 D DA 10 B N6 DA 10 1_555 hydrog REVERSED WATSON-CRICK C DG 14 A N1 DG 14 1_555 D DC 9 B O2 DC 9 1_555 hydrog REVERSED WATSON-CRICK C DG 14 A N2 DG 14 1_555 D DC 9 B N3 DC 9 1_555 hydrog WATSON-CRICK C DG 15 A N1 DG 15 1_555 D DC 8 B N3 DC 8 1_555 hydrog WATSON-CRICK C DG 15 A N2 DG 15 1_555 D DC 8 B O2 DC 8 1_555 hydrog WATSON-CRICK C DG 15 A O6 DG 15 1_555 D DC 8 B N4 DC 8 1_555 hydrog WATSON-CRICK C DT 16 A N3 DT 16 1_555 D DA 7 B N1 DA 7 1_555 hydrog WATSON-CRICK C DT 16 A O4 DT 16 1_555 D DA 7 B N6 DA 7 1_555 hydrog WATSON-CRICK C DC 17 A N3 DC 17 1_555 D DG 6 B N1 DG 6 1_555 hydrog WATSON-CRICK C DC 17 A N4 DC 17 1_555 D DG 6 B O6 DG 6 1_555 hydrog WATSON-CRICK C DC 17 A O2 DC 17 1_555 D DG 6 B N2 DG 6 1_555 hydrog WATSON-CRICK C DC 18 A N3 DC 18 1_555 D DG 5 B N1 DG 5 1_555 hydrog WATSON-CRICK C DC 18 A N4 DC 18 1_555 D DG 5 B O6 DG 5 1_555 hydrog WATSON-CRICK C DC 18 A O2 DC 18 1_555 D DG 5 B N2 DG 5 1_555 hydrog WATSON-CRICK C DC 20 A N3 DC 20 1_555 D DG 3 B N1 DG 3 1_555 hydrog WATSON-CRICK C DC 20 A N4 DC 20 1_555 D DG 3 B O6 DG 3 1_555 hydrog WATSON-CRICK C DC 20 A O2 DC 20 1_555 D DG 3 B N2 DG 3 1_555 hydrog DG-DC PAIR C DG 21 A N1 DG 21 1_555 D DC 2 B O2 DC 2 1_555 TRANSCRIPTION/DNA PROTEIN-DNA COMPLEX, TRANSCRIPTION-DNA COMPLEX GLI1_HUMAN UNP 3 232 P08151 2GLI PDB 1 2GLI 2GLI PDB 2 2GLI 232 391 2GLI 103 257 P08151 A 1 1 155 1 21 2GLI 1 21 2GLI C 2 1 21 1 21 2GLI 1 21 2GLI D 3 1 21 2 2 anti-parallel anti-parallel A TYR 200 C TYR 98 A MET 201 C MET 99 A ALA 210 C ALA 108 A PHE 211 C PHE 109 A TYR 231 C TYR 129 A VAL 232 C VAL 130 A ARG 241 C ARG 139 A TYR 242 C TYR 140 BINDING SITE FOR RESIDUE CO A 258 A CO 258 Software 4 BINDING SITE FOR RESIDUE CO A 259 A CO 259 Software 4 BINDING SITE FOR RESIDUE CO A 260 A CO 260 Software 4 BINDING SITE FOR RESIDUE CO A 261 A CO 261 Software 4 BINDING SITE FOR RESIDUE CO A 262 A CO 262 Software 4 A CYS 106 C CYS 4 4 1_555 A CYS 111 C CYS 9 4 1_555 A HIS 124 C HIS 22 4 1_555 A HIS 129 C HIS 27 4 1_555 A CYS 139 C CYS 37 4 1_555 A CYS 144 C CYS 42 4 1_555 A HIS 160 C HIS 58 4 1_555 A HIS 164 C HIS 62 4 1_555 A CYS 172 C CYS 70 4 1_555 A CYS 177 C CYS 75 4 1_555 A HIS 190 C HIS 88 4 1_555 A HIS 194 C HIS 92 4 1_555 A CYS 202 C CYS 100 4 1_555 A CYS 207 C CYS 105 4 1_555 A HIS 220 C HIS 118 4 1_555 A HIS 225 C HIS 123 4 1_555 A CYS 233 C CYS 131 4 1_555 A CYS 238 C CYS 136 4 1_555 A HIS 251 C HIS 149 4 1_555 A HIS 256 C HIS 154 4 1_555 19 P 21 21 21