HEADER DNA 18-APR-06 2GPX TITLE 2'-ME-SE AND BR DERIVITATION OF A-DNA OCTAMER G(UMS)G(BRU)ACAC COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*GP*(UMS)P*GP*(BRU)P*AP*CP*AP*C)-3'; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: SOLID PHASE SYNTHESIS VIA PHOSPHORAMIDITE CHEMISTRY KEYWDS 2'-METHYLSELENO-URIDINE, SE-DNA, SE-BR-DNA, SELENIUM DERIVATIZATION, KEYWDS 2 DNA EXPDTA X-RAY DIFFRACTION AUTHOR J.JIANG,Z.HUANG REVDAT 5 30-AUG-23 2GPX 1 REMARK LINK REVDAT 4 24-FEB-09 2GPX 1 VERSN REVDAT 3 30-SEP-08 2GPX 1 JRNL REVDAT 2 04-JUL-06 2GPX 1 JRNL REVDAT 1 23-MAY-06 2GPX 0 JRNL AUTH J.JIANG,J.SHENG,N.CARRASCO,Z.HUANG JRNL TITL SELENIUM DERIVATIZATION OF NUCLEIC ACIDS FOR JRNL TITL 2 CRYSTALLOGRAPHY. JRNL REF NUCLEIC ACIDS RES. V. 35 477 2007 JRNL REFN ISSN 0305-1048 JRNL PMID 17169989 JRNL DOI 10.1093/NAR/GKL1070 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD FUNCTION REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 421128.020 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.4 REMARK 3 NUMBER OF REFLECTIONS : 2909 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 289 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.014 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.70 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 75.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 333 REMARK 3 BIN R VALUE (WORKING SET) : 0.2130 REMARK 3 BIN FREE R VALUE : 0.2440 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 11.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 44 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.037 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 162 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 31 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.31000 REMARK 3 B22 (A**2) : 0.31000 REMARK 3 B33 (A**2) : -0.62000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.16 REMARK 3 ESD FROM SIGMAA (A) : 0.12 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.12 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.800 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 30.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 2.090 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 40.05 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : DNA-RNA_UMS.PAR REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : UMS.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2GPX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000037409. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAR-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1, 0.9797, 0.9196, 0.94 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CBASS REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 3161 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 18.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 12.40 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 9.00 REMARK 200 R MERGE FOR SHELL (I) : 0.49900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1Z7I, 2DJL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% V/V MPD 40MM SODIUM CACODYLATE, REMARK 280 12MM SPERMINE TETRA-HCI, 80 MM SODIUM CHLORIDE, 20 MM BARIUM REMARK 280 CHLORIDE, PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 12.06650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 21.12600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 21.12600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 18.09975 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 21.12600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 21.12600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 6.03325 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 21.12600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 21.12600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 18.09975 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 21.12600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 21.12600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 6.03325 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 12.06650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG A 3 C5 DG A 3 C6 0.064 REMARK 500 DC A 8 C5 DC A 8 C6 0.051 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG A 1 O4' - C1' - N9 ANGL. DEV. = -7.3 DEGREES REMARK 500 DG A 3 O4' - C1' - N9 ANGL. DEV. = -7.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BA A 101 BA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 UMS A 2 O4 REMARK 620 2 DG A 3 O6 71.0 REMARK 620 3 HOH A 105 O 76.1 86.5 REMARK 620 4 HOH A 111 O 66.3 130.7 105.6 REMARK 620 5 HOH A 116 O 146.8 76.3 107.8 138.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BA A 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Z7I RELATED DB: PDB REMARK 900 2'-ME-SE DERIVITATION OF A-DNA OCTAMER G(UMSE)GTACAC REMARK 900 RELATED ID: 2DLJ RELATED DB: PDB REMARK 900 2'-ME-SE AND BR DERIVITATION OF A-DNA OCTAMER G(UMS)G(BRU)ACAC DBREF 2GPX A 1 8 PDB 2GPX 2GPX 1 8 SEQRES 1 A 8 DG UMS DG BRU DA DC DA DC MODRES 2GPX UMS A 2 DU MODRES 2GPX BRU A 4 DU HET UMS A 2 21 HET BRU A 4 20 HET BA A 101 1 HETNAM UMS 2'-METHYLSELENYL-2'-DEOXYURIDINE-5'-PHOSPHATE HETNAM BRU 5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE HETNAM BA BARIUM ION FORMUL 1 UMS C10 H15 N2 O8 P SE FORMUL 1 BRU C9 H12 BR N2 O8 P FORMUL 2 BA BA 2+ FORMUL 3 HOH *31(H2 O) LINK O3' DG A 1 P UMS A 2 1555 1555 1.63 LINK O3' UMS A 2 P DG A 3 1555 1555 1.61 LINK O3' DG A 3 P BRU A 4 1555 1555 1.60 LINK O3' BRU A 4 P DA A 5 1555 1555 1.61 LINK O4 UMS A 2 BA BA A 101 1555 1555 2.77 LINK O6 DG A 3 BA BA A 101 1555 1555 2.91 LINK BA BA A 101 O HOH A 105 1555 1555 2.96 LINK BA BA A 101 O HOH A 111 1555 1555 2.72 LINK BA BA A 101 O HOH A 116 1555 7555 2.85 SITE 1 AC1 5 UMS A 2 DG A 3 HOH A 105 HOH A 111 SITE 2 AC1 5 HOH A 116 CRYST1 42.252 42.252 24.133 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023668 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023668 0.000000 0.00000 SCALE3 0.000000 0.000000 0.041437 0.00000 ATOM 1 O5' DG A 1 7.241 -1.943 -5.277 1.00 22.07 O ATOM 2 C5' DG A 1 7.209 -3.358 -5.126 1.00 22.25 C ATOM 3 C4' DG A 1 8.343 -4.015 -4.373 1.00 20.77 C ATOM 4 O4' DG A 1 9.564 -3.842 -5.152 1.00 20.24 O ATOM 5 C3' DG A 1 8.653 -3.389 -3.014 1.00 22.05 C ATOM 6 O3' DG A 1 7.970 -3.967 -1.906 1.00 22.28 O ATOM 7 C2' DG A 1 10.159 -3.533 -2.874 1.00 20.94 C ATOM 8 C1' DG A 1 10.695 -3.676 -4.289 1.00 21.25 C ATOM 9 N9 DG A 1 11.104 -2.307 -4.636 1.00 21.16 N ATOM 10 C8 DG A 1 10.381 -1.336 -5.297 1.00 20.25 C ATOM 11 N7 DG A 1 11.018 -0.193 -5.390 1.00 20.80 N ATOM 12 C5 DG A 1 12.239 -0.423 -4.761 1.00 20.56 C ATOM 13 C6 DG A 1 13.394 0.463 -4.531 1.00 20.40 C ATOM 14 O6 DG A 1 13.543 1.642 -4.856 1.00 19.76 O ATOM 15 N1 DG A 1 14.415 -0.206 -3.851 1.00 21.34 N ATOM 16 C2 DG A 1 14.371 -1.522 -3.455 1.00 21.53 C ATOM 17 N2 DG A 1 15.495 -2.013 -2.868 1.00 24.45 N ATOM 18 N3 DG A 1 13.330 -2.320 -3.632 1.00 20.96 N ATOM 19 C4 DG A 1 12.313 -1.719 -4.293 1.00 20.64 C HETATM 20 P UMS A 2 7.445 -2.997 -0.712 1.00 23.22 P HETATM 21 OP1 UMS A 2 6.561 -3.828 0.159 1.00 24.36 O HETATM 22 OP2 UMS A 2 6.934 -1.725 -1.279 1.00 23.21 O HETATM 23 O5' UMS A 2 8.763 -2.661 0.105 1.00 23.54 O HETATM 24 C5' UMS A 2 9.532 -3.725 0.639 1.00 23.47 C HETATM 25 C4' UMS A 2 10.832 -3.232 1.228 1.00 24.18 C HETATM 26 O4' UMS A 2 11.699 -2.802 0.149 1.00 22.87 O HETATM 27 C3' UMS A 2 10.763 -2.030 2.162 1.00 25.53 C HETATM 28 O3' UMS A 2 10.455 -2.391 3.502 1.00 28.21 O HETATM 29 C2' UMS A 2 12.171 -1.459 2.053 1.00 25.39 C HETATM 30 SE2' UMS A 2 13.487 -2.690 3.163 0.79 30.49 SE HETATM 31 C1' UMS A 2 12.591 -1.786 0.633 1.00 24.28 C HETATM 32 CA' UMS A 2 15.109 -1.624 3.066 1.00 30.22 C HETATM 33 N1 UMS A 2 12.267 -0.644 -0.295 1.00 22.58 N HETATM 34 C2 UMS A 2 13.272 0.313 -0.480 1.00 22.23 C HETATM 35 O2 UMS A 2 14.374 0.226 0.044 1.00 23.76 O HETATM 36 N3 UMS A 2 12.950 1.366 -1.297 1.00 20.86 N HETATM 37 C4 UMS A 2 11.759 1.588 -1.948 1.00 19.33 C HETATM 38 O4 UMS A 2 11.621 2.581 -2.629 1.00 20.80 O HETATM 39 C5 UMS A 2 10.710 0.538 -1.741 1.00 19.58 C HETATM 40 C6 UMS A 2 11.036 -0.527 -0.915 1.00 20.38 C ATOM 41 P DG A 3 9.647 -1.345 4.429 1.00 28.99 P ATOM 42 OP1 DG A 3 9.056 -2.148 5.528 1.00 31.99 O ATOM 43 OP2 DG A 3 8.783 -0.460 3.615 1.00 28.97 O ATOM 44 O5' DG A 3 10.830 -0.489 5.019 1.00 29.54 O ATOM 45 C5' DG A 3 10.846 0.905 4.898 1.00 27.34 C ATOM 46 C4' DG A 3 12.270 1.376 4.954 1.00 25.62 C ATOM 47 O4' DG A 3 12.782 1.279 3.598 1.00 25.58 O ATOM 48 C3' DG A 3 12.371 2.844 5.334 1.00 24.78 C ATOM 49 O3' DG A 3 12.768 3.042 6.677 1.00 24.48 O ATOM 50 C2' DG A 3 13.406 3.429 4.396 1.00 24.67 C ATOM 51 C1' DG A 3 13.568 2.412 3.273 1.00 24.10 C ATOM 52 N9 DG A 3 12.785 2.968 2.161 1.00 22.36 N ATOM 53 C8 DG A 3 11.563 2.578 1.651 1.00 20.58 C ATOM 54 N7 DG A 3 11.172 3.319 0.643 1.00 21.53 N ATOM 55 C5 DG A 3 12.201 4.242 0.474 1.00 20.51 C ATOM 56 C6 DG A 3 12.386 5.340 -0.505 1.00 19.54 C ATOM 57 O6 DG A 3 11.662 5.667 -1.459 1.00 19.07 O ATOM 58 N1 DG A 3 13.566 6.045 -0.256 1.00 18.94 N ATOM 59 C2 DG A 3 14.462 5.760 0.753 1.00 18.80 C ATOM 60 N2 DG A 3 15.523 6.577 0.865 1.00 18.70 N ATOM 61 N3 DG A 3 14.326 4.755 1.604 1.00 19.28 N ATOM 62 C4 DG A 3 13.187 4.050 1.413 1.00 21.13 C HETATM 63 N1 BRU A 4 13.696 7.816 3.720 1.00 21.01 N HETATM 64 C2 BRU A 4 13.608 8.688 2.630 1.00 20.33 C HETATM 65 N3 BRU A 4 12.516 8.500 1.785 1.00 18.25 N HETATM 66 C4 BRU A 4 11.481 7.572 1.924 1.00 19.76 C HETATM 67 C5 BRU A 4 11.591 6.658 3.140 1.00 20.55 C HETATM 68 C6 BRU A 4 12.727 6.834 3.950 1.00 21.04 C HETATM 69 O2 BRU A 4 14.423 9.588 2.447 1.00 19.76 O HETATM 70 O4 BRU A 4 10.569 7.533 1.094 1.00 20.31 O HETATM 71 BR BRU A 4 10.368 5.513 3.454 0.86 23.77 BR HETATM 72 C1' BRU A 4 14.873 8.052 4.638 1.00 23.33 C HETATM 73 C2' BRU A 4 14.374 8.883 5.808 1.00 23.96 C HETATM 74 C3' BRU A 4 14.342 7.957 7.007 1.00 24.15 C HETATM 75 C4' BRU A 4 15.132 6.721 6.576 1.00 24.17 C HETATM 76 O3' BRU A 4 14.877 8.651 8.118 1.00 23.78 O HETATM 77 O4' BRU A 4 15.112 6.727 5.119 1.00 24.09 O HETATM 78 C5' BRU A 4 14.506 5.431 7.053 1.00 24.78 C HETATM 79 O5' BRU A 4 13.089 5.505 6.959 1.00 23.62 O HETATM 80 P BRU A 4 12.172 4.304 7.463 1.00 23.58 P HETATM 81 OP1 BRU A 4 12.418 4.058 8.903 1.00 24.83 O HETATM 82 OP2 BRU A 4 10.807 4.619 6.993 1.00 24.12 O ATOM 83 P DA A 5 13.976 9.779 8.819 1.00 24.63 P ATOM 84 OP1 DA A 5 14.475 9.918 10.224 1.00 25.82 O ATOM 85 OP2 DA A 5 12.530 9.545 8.588 1.00 26.38 O ATOM 86 O5' DA A 5 14.405 11.085 8.030 1.00 23.79 O ATOM 87 C5' DA A 5 13.460 12.024 7.606 1.00 22.87 C ATOM 88 C4' DA A 5 14.103 12.932 6.590 1.00 22.57 C ATOM 89 O4' DA A 5 14.264 12.147 5.372 1.00 21.09 O ATOM 90 C3' DA A 5 13.220 14.109 6.214 1.00 22.73 C ATOM 91 O3' DA A 5 13.579 15.302 6.879 1.00 24.16 O ATOM 92 C2' DA A 5 13.378 14.245 4.711 1.00 21.45 C ATOM 93 C1' DA A 5 13.766 12.857 4.245 1.00 20.57 C ATOM 94 N9 DA A 5 12.564 12.158 3.792 1.00 19.60 N ATOM 95 C8 DA A 5 11.901 11.122 4.422 1.00 19.78 C ATOM 96 N7 DA A 5 10.860 10.679 3.752 1.00 19.67 N ATOM 97 C5 DA A 5 10.834 11.470 2.610 1.00 18.94 C ATOM 98 C6 DA A 5 9.971 11.494 1.500 1.00 19.06 C ATOM 99 N6 DA A 5 8.941 10.657 1.339 1.00 18.10 N ATOM 100 N1 DA A 5 10.201 12.424 0.549 1.00 17.68 N ATOM 101 C2 DA A 5 11.227 13.268 0.715 1.00 16.78 C ATOM 102 N3 DA A 5 12.109 13.346 1.715 1.00 18.09 N ATOM 103 C4 DA A 5 11.862 12.402 2.633 1.00 19.01 C ATOM 104 P DC A 6 12.414 16.279 7.383 1.00 25.77 P ATOM 105 OP1 DC A 6 13.115 17.345 8.159 1.00 25.11 O ATOM 106 OP2 DC A 6 11.303 15.509 7.993 1.00 23.71 O ATOM 107 O5' DC A 6 11.875 16.919 6.040 1.00 24.15 O ATOM 108 C5' DC A 6 12.753 17.624 5.189 1.00 23.66 C ATOM 109 C4' DC A 6 12.036 18.027 3.926 1.00 24.35 C ATOM 110 O4' DC A 6 11.861 16.829 3.123 1.00 22.88 O ATOM 111 C3' DC A 6 10.624 18.555 4.149 1.00 24.77 C ATOM 112 O3' DC A 6 10.533 19.962 4.262 1.00 26.00 O ATOM 113 C2' DC A 6 9.871 18.105 2.910 1.00 24.24 C ATOM 114 C1' DC A 6 10.642 16.896 2.394 1.00 22.92 C ATOM 115 N1 DC A 6 9.808 15.728 2.766 1.00 21.71 N ATOM 116 C2 DC A 6 8.846 15.274 1.851 1.00 21.03 C ATOM 117 O2 DC A 6 8.715 15.887 0.788 1.00 22.28 O ATOM 118 N3 DC A 6 8.077 14.197 2.155 1.00 19.55 N ATOM 119 C4 DC A 6 8.207 13.581 3.335 1.00 19.20 C ATOM 120 N4 DC A 6 7.411 12.522 3.584 1.00 18.92 N ATOM 121 C5 DC A 6 9.154 14.016 4.310 1.00 21.35 C ATOM 122 C6 DC A 6 9.948 15.104 3.980 1.00 20.33 C ATOM 123 P DA A 7 9.259 20.584 5.005 1.00 26.66 P ATOM 124 OP1 DA A 7 9.634 21.993 5.360 1.00 28.52 O ATOM 125 OP2 DA A 7 8.776 19.667 6.074 1.00 27.11 O ATOM 126 O5' DA A 7 8.152 20.608 3.885 1.00 25.01 O ATOM 127 C5' DA A 7 8.411 21.255 2.650 1.00 24.95 C ATOM 128 C4' DA A 7 7.163 21.274 1.805 1.00 24.60 C ATOM 129 O4' DA A 7 7.025 19.952 1.225 1.00 23.62 O ATOM 130 C3' DA A 7 5.888 21.519 2.597 1.00 25.18 C ATOM 131 O3' DA A 7 5.387 22.841 2.510 1.00 26.53 O ATOM 132 C2' DA A 7 4.872 20.565 2.005 1.00 25.39 C ATOM 133 C1' DA A 7 5.667 19.543 1.213 1.00 22.90 C ATOM 134 N9 DA A 7 5.586 18.264 1.926 1.00 21.50 N ATOM 135 C8 DA A 7 6.339 17.823 2.996 1.00 20.01 C ATOM 136 N7 DA A 7 6.014 16.620 3.411 1.00 18.70 N ATOM 137 C5 DA A 7 4.985 16.246 2.559 1.00 19.84 C ATOM 138 C6 DA A 7 4.206 15.077 2.468 1.00 18.53 C ATOM 139 N6 DA A 7 4.336 14.024 3.281 1.00 18.21 N ATOM 140 N1 DA A 7 3.266 15.025 1.499 1.00 19.29 N ATOM 141 C2 DA A 7 3.111 16.088 0.690 1.00 18.61 C ATOM 142 N3 DA A 7 3.776 17.242 0.679 1.00 20.44 N ATOM 143 C4 DA A 7 4.710 17.255 1.646 1.00 19.17 C ATOM 144 P DC A 8 4.411 23.377 3.672 1.00 27.04 P ATOM 145 OP1 DC A 8 4.438 24.866 3.542 1.00 29.58 O ATOM 146 OP2 DC A 8 4.823 22.752 4.956 1.00 29.00 O ATOM 147 O5' DC A 8 2.969 22.842 3.277 1.00 26.76 O ATOM 148 C5' DC A 8 2.397 23.151 2.001 1.00 28.76 C ATOM 149 C4' DC A 8 1.078 22.435 1.810 1.00 29.92 C ATOM 150 O4' DC A 8 1.275 20.993 1.763 1.00 29.69 O ATOM 151 C3' DC A 8 0.016 22.684 2.888 1.00 30.46 C ATOM 152 O3' DC A 8 -1.302 22.630 2.313 1.00 32.88 O ATOM 153 C2' DC A 8 0.123 21.448 3.759 1.00 29.72 C ATOM 154 C1' DC A 8 0.440 20.371 2.730 1.00 28.76 C ATOM 155 N1 DC A 8 1.183 19.251 3.355 1.00 26.98 N ATOM 156 C2 DC A 8 0.664 17.938 3.232 1.00 25.98 C ATOM 157 O2 DC A 8 -0.358 17.757 2.550 1.00 26.49 O ATOM 158 N3 DC A 8 1.288 16.903 3.858 1.00 24.42 N ATOM 159 C4 DC A 8 2.389 17.121 4.594 1.00 24.65 C ATOM 160 N4 DC A 8 2.934 16.080 5.242 1.00 21.53 N ATOM 161 C5 DC A 8 2.976 18.420 4.710 1.00 24.86 C ATOM 162 C6 DC A 8 2.332 19.468 4.062 1.00 25.63 C TER 163 DC A 8 HETATM 164 BA BA A 101 9.563 4.396 -3.025 0.88 27.30 BA HETATM 165 O HOH A 102 14.510 14.973 1.257 1.00 20.26 O HETATM 166 O HOH A 103 2.349 19.579 -0.606 1.00 32.07 O HETATM 167 O HOH A 104 6.789 -1.450 -7.827 1.00 35.46 O HETATM 168 O HOH A 105 8.805 2.995 -0.535 1.00 28.99 O HETATM 169 O HOH A 106 8.982 9.067 4.799 1.00 25.51 O HETATM 170 O HOH A 107 5.991 -3.785 2.712 1.00 43.03 O HETATM 171 O HOH A 108 12.704 5.151 11.303 1.00 29.24 O HETATM 172 O HOH A 109 4.085 -4.672 -0.809 1.00 33.23 O HETATM 173 O HOH A 110 16.649 4.569 3.273 1.00 29.11 O HETATM 174 O HOH A 111 9.700 2.470 -4.935 1.00 33.19 O HETATM 175 O HOH A 112 11.995 3.593 -5.925 1.00 39.03 O HETATM 176 O HOH A 113 4.041 26.202 1.226 1.00 33.60 O HETATM 177 O HOH A 114 5.434 -1.048 -3.477 1.00 37.13 O HETATM 178 O HOH A 115 7.059 1.094 -0.401 1.00 46.87 O HETATM 179 O HOH A 116 7.102 8.693 2.802 1.00 28.95 O HETATM 180 O HOH A 117 6.519 15.249 6.006 1.00 39.38 O HETATM 181 O HOH A 118 4.028 -5.695 -3.364 1.00 26.34 O HETATM 182 O HOH A 119 8.656 16.426 7.171 1.00 43.19 O HETATM 183 O HOH A 120 17.170 3.748 5.917 1.00 42.82 O HETATM 184 O HOH A 121 12.100 -3.189 7.752 1.00 46.41 O HETATM 185 O HOH A 122 8.386 3.061 6.455 1.00 51.32 O HETATM 186 O HOH A 123 8.417 3.325 3.807 1.00 37.34 O HETATM 187 O HOH A 124 9.869 2.003 -7.479 1.00 47.57 O HETATM 188 O HOH A 125 8.262 5.889 0.450 1.00 46.35 O HETATM 189 O HOH A 126 8.535 1.450 1.731 1.00 52.58 O HETATM 190 O HOH A 127 13.407 2.842 12.301 1.00 58.07 O HETATM 191 O HOH A 128 10.121 -4.435 6.157 1.00 51.12 O HETATM 192 O HOH A 129 13.103 -0.663 8.384 1.00 54.67 O HETATM 193 O HOH A 130 11.164 0.704 9.495 1.00 63.61 O HETATM 194 O HOH A 131 15.008 -1.302 6.596 1.00 47.68 O HETATM 195 O HOH A 132 9.401 -1.372 8.650 1.00 61.87 O CONECT 6 20 CONECT 20 6 21 22 23 CONECT 21 20 CONECT 22 20 CONECT 23 20 24 CONECT 24 23 25 CONECT 25 24 26 27 CONECT 26 25 31 CONECT 27 25 28 29 CONECT 28 27 41 CONECT 29 27 30 31 CONECT 30 29 32 CONECT 31 26 29 33 CONECT 32 30 CONECT 33 31 34 40 CONECT 34 33 35 36 CONECT 35 34 CONECT 36 34 37 CONECT 37 36 38 39 CONECT 38 37 164 CONECT 39 37 40 CONECT 40 33 39 CONECT 41 28 CONECT 49 80 CONECT 57 164 CONECT 63 64 68 72 CONECT 64 63 65 69 CONECT 65 64 66 CONECT 66 65 67 70 CONECT 67 66 68 71 CONECT 68 63 67 CONECT 69 64 CONECT 70 66 CONECT 71 67 CONECT 72 63 73 77 CONECT 73 72 74 CONECT 74 73 75 76 CONECT 75 74 77 78 CONECT 76 74 83 CONECT 77 72 75 CONECT 78 75 79 CONECT 79 78 80 CONECT 80 49 79 81 82 CONECT 81 80 CONECT 82 80 CONECT 83 76 CONECT 164 38 57 168 174 CONECT 168 164 CONECT 174 164 MASTER 303 0 3 0 0 0 2 6 194 1 49 1 END