0.004452
0.002570
0.000000
0.000000
0.005141
0.000000
0.000000
0.000000
0.013277
0.00000
0.00000
0.00000
Arasappan, A.
Njoroge, F.G.
Chen, K.X.
Venkatraman, S.
Parekh, T.N.
Gu, H.
Pichardo, J.
Butkiewicz, N.
Prongay, A.
Madison, V.
Girijavallabhan, V.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
36
90.00
90.00
120.00
224.615
224.615
75.321
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C42 H56 N6 O9
788.929
(6R,8S,11S)-11-CYCLOHEXYL-N-(1-{[(2-{[(1S)-2-(DIMETHYLAMINO)-2-OXO-1-PHENYLETHYL]AMINO}-2-OXOETHYL)AMINO](OXO)ACETYL}BUTYL)-10,13-DIOXO-2,5-DIOXA-9,12-DIAZATRICYCLO[14.3.1.1~6,9~]HENICOSA-1(20),16,18-TRIENE-8-CARBOXAMIDE
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
UK
Bioorg.Med.Chem.Lett.
BMCLE8
1127
0960-894X
16
3960
3965
10.1016/j.bmcl.2006.05.022
16730985
P2-P4 macrocyclic inhibitors of hepatitis C virus NS3-4A serine protease.
2006
8861917
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
87
343
355
10.1016/S0092-8674(00)81351-3
8861917
Crystal structure of the hepatitis C virus NS3 protease domain complexed with a synthetic NS4A cofactor peptide
1996
16352601
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
281
8205
8215
10.1074/jbc.M510246200
16352601
Mutations conferring resistance to SCH6, a novel hepatitis C virus NS3/4A protease inhibitor. Reduced RNA replication fitness and partial rescue by second-site mutations
2006
14984200
US
ARCH.BIOCHEM.BIOPHYS.
ABBIA4
0158
0003-9861
421
207
216
10.1016/j.abb.2003.11.013
14984200
Hepatitis C NS3 protease inhibition by peptidyl-alpha-ketoamide inhibitors: kinetic mechanism and structure
2004
16087332
UK
BIOORG.MED.CHEM.LETT.
BMCLE8
1127
0960-894X
15
4180
4184
10.1016/j.bmcl.2005.06.091
16087332
Hepatitis C Virus NS3-4A serine protease inhibitors: SAR of P'2 moiety with improved potency
2005
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
95.0
1
CCD
ADSC QUANTUM 210
SINGLE WAVELENGTH
M
x-ray
1
1.000
1.0
17-ID
APS
1.000
SYNCHROTRON
APS BEAMLINE 17-ID
21102.027
polyprotein
NS3 protease domain, residues 1027-1207
2
man
polymer
2394.039
Polyprotein
NS4a peptide, residues 1680-1696
2
syn
polymer
65.409
ZINC ION
2
syn
non-polymer
788.929
(6R,8S,11S)-11-CYCLOHEXYL-N-(1-{[(2-{[(1S)-2-(DIMETHYLAMINO)-2-OXO-1-PHENYLETHYL]AMINO}-2-OXOETHYL)AMINO](OXO)ACETYL}BUTYL)-10,13-DIOXO-2,5-DIOXA-9,12-DIAZATRICYCLO[14.3.1.1~6,9~]HENICOSA-1(20),16,18-TRIENE-8-CARBOXAMIDE
1
syn
non-polymer
18.015
water
128
nat
water
no
no
ASMTGGQQMGAPITAYAQQTRGLLGCIITSLTGRDKNQVEGEVQIVSTATQTFLATCINGVCWTVYHGAGTRTIASPKGP
VIQMYTNVDQDLVGWPAPQGSRSLTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRPISYLKGSSGGPLLCPAGHA
VGLFRAAVCTRGVAKAVDFIPVENLETTMRSGSHHHHHH
ASMTGGQQMGAPITAYAQQTRGLLGCIITSLTGRDKNQVEGEVQIVSTATQTFLATCINGVCWTVYHGAGTRTIASPKGP
VIQMYTNVDQDLVGWPAPQGSRSLTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRPISYLKGSSGGPLLCPAGHA
VGLFRAAVCTRGVAKAVDFIPVENLETTMRSGSHHHHHH
A,C
polypeptide(L)
no
no
KKGSVVIVGRIVLSGKPAIIPKK
KKGSVVIVGRIVLSGKPAIIPKK
B,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Hepacivirus
Escherichia
sample
11103
Hepatitis C virus
562
Escherichia coli
1
3.89
68.37
protein solution mixed with equal volume of a solution containing 0.75-1.00 M NaCl, 0.1 M MES, 0.1 M Na/K PO4, pH 5.6-6.2. The trays were set at 277K for 5-7 days to control nucleation, followed by incubation for 3 weeks at 285 K to maximize crystal growth, pH 5.6-5.8, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
repository
Initial release
Version format compliance
Version format compliance
1
0
2007-01-23
1
1
2008-05-01
1
2
2011-07-13
Crystal structure of the hepatitis C virus NS3 protease domain complexed with a synthetic NS4A cofactor peptide
HCV NS3-4A protease domain complexed with a ketoamide inhibitor, SCH446211
M9A HCV Protease complex with pentapeptide keto-amide inhibitor
Hepatitis C Protease NS3-4A serine protease with Ketoamide Inhibitor SCH225724 Bound
HCV NS3 Protease Domain with a Ketoamide Inhibitor Covalently bound
HCV NS3 protease with NS4a peptide and a covalently bound macrocyclic ketoamide compound
RCSB
Y
RCSB
2006-05-02
REL
REL
ZN
ZINC ION
NHN
(6R,8S,11S)-11-CYCLOHEXYL-N-(1-{[(2-{[(1S)-2-(DIMETHYLAMINO)-2-OXO-1-PHENYLETHYL]AMINO}-2-OXOETHYL)AMINO](OXO)ACETYL}BUTYL)-10,13-DIOXO-2,5-DIOXA-9,12-DIAZATRICYCLO[14.3.1.1~6,9~]HENICOSA-1(20),16,18-TRIENE-8-CARBOXAMIDE
HOH
water
This sequence occurs naturally in Hepatitis C virus
sample
ZN
901
3
ZN
ZN
901
A
NHN
999
4
NHN
NHN
999
A
ZN
902
3
ZN
ZN
902
C
HOH
2
5
HOH
HOH
1000
A
HOH
3
5
HOH
HOH
1001
A
HOH
4
5
HOH
HOH
1002
A
HOH
6
5
HOH
HOH
1003
A
HOH
8
5
HOH
HOH
1004
A
HOH
9
5
HOH
HOH
1005
A
HOH
10
5
HOH
HOH
1006
A
HOH
11
5
HOH
HOH
1007
A
HOH
14
5
HOH
HOH
1008
A
HOH
18
5
HOH
HOH
1009
A
HOH
19
5
HOH
HOH
1010
A
HOH
21
5
HOH
HOH
1011
A
HOH
22
5
HOH
HOH
1012
A
HOH
23
5
HOH
HOH
1013
A
HOH
25
5
HOH
HOH
1014
A
HOH
26
5
HOH
HOH
1015
A
HOH
29
5
HOH
HOH
1016
A
HOH
31
5
HOH
HOH
1017
A
HOH
32
5
HOH
HOH
1018
A
HOH
35
5
HOH
HOH
1019
A
HOH
36
5
HOH
HOH
1020
A
HOH
44
5
HOH
HOH
1021
A
HOH
48
5
HOH
HOH
1022
A
HOH
51
5
HOH
HOH
1023
A
HOH
52
5
HOH
HOH
1024
A
HOH
57
5
HOH
HOH
1025
A
HOH
58
5
HOH
HOH
1026
A
HOH
59
5
HOH
HOH
1027
A
HOH
60
5
HOH
HOH
1028
A
HOH
61
5
HOH
HOH
1029
A
HOH
62
5
HOH
HOH
1030
A
HOH
64
5
HOH
HOH
1031
A
HOH
65
5
HOH
HOH
1032
A
HOH
66
5
HOH
HOH
1033
A
HOH
67
5
HOH
HOH
1034
A
HOH
68
5
HOH
HOH
1035
A
HOH
69
5
HOH
HOH
1036
A
HOH
70
5
HOH
HOH
1037
A
HOH
71
5
HOH
HOH
1038
A
HOH
72
5
HOH
HOH
1039
A
HOH
74
5
HOH
HOH
1040
A
HOH
76
5
HOH
HOH
1041
A
HOH
77
5
HOH
HOH
1042
A
HOH
83
5
HOH
HOH
1043
A
HOH
84
5
HOH
HOH
1044
A
HOH
85
5
HOH
HOH
1045
A
HOH
86
5
HOH
HOH
1046
A
HOH
89
5
HOH
HOH
1047
A
HOH
91
5
HOH
HOH
1048
A
HOH
92
5
HOH
HOH
1049
A
HOH
93
5
HOH
HOH
1050
A
HOH
96
5
HOH
HOH
1051
A
HOH
97
5
HOH
HOH
1052
A
HOH
98
5
HOH
HOH
1053
A
HOH
99
5
HOH
HOH
1054
A
HOH
102
5
HOH
HOH
1055
A
HOH
104
5
HOH
HOH
1056
A
HOH
106
5
HOH
HOH
1057
A
HOH
107
5
HOH
HOH
1058
A
HOH
108
5
HOH
HOH
1059
A
HOH
111
5
HOH
HOH
1060
A
HOH
112
5
HOH
HOH
1061
A
HOH
117
5
HOH
HOH
1062
A
HOH
118
5
HOH
HOH
1063
A
HOH
119
5
HOH
HOH
1064
A
HOH
122
5
HOH
HOH
1065
A
HOH
123
5
HOH
HOH
1066
A
HOH
126
5
HOH
HOH
1067
A
HOH
128
5
HOH
HOH
1068
A
HOH
13
5
HOH
HOH
42
B
HOH
17
5
HOH
HOH
43
B
HOH
20
5
HOH
HOH
44
B
HOH
41
5
HOH
HOH
45
B
HOH
49
5
HOH
HOH
46
B
HOH
56
5
HOH
HOH
47
B
HOH
73
5
HOH
HOH
48
B
HOH
75
5
HOH
HOH
49
B
HOH
81
5
HOH
HOH
50
B
HOH
82
5
HOH
HOH
51
B
HOH
103
5
HOH
HOH
52
B
HOH
109
5
HOH
HOH
53
B
HOH
1
5
HOH
HOH
903
C
HOH
5
5
HOH
HOH
904
C
HOH
7
5
HOH
HOH
905
C
HOH
12
5
HOH
HOH
906
C
HOH
15
5
HOH
HOH
907
C
HOH
16
5
HOH
HOH
908
C
HOH
27
5
HOH
HOH
909
C
HOH
28
5
HOH
HOH
910
C
HOH
30
5
HOH
HOH
911
C
HOH
34
5
HOH
HOH
912
C
HOH
37
5
HOH
HOH
913
C
HOH
39
5
HOH
HOH
914
C
HOH
40
5
HOH
HOH
915
C
HOH
42
5
HOH
HOH
916
C
HOH
46
5
HOH
HOH
917
C
HOH
50
5
HOH
HOH
918
C
HOH
53
5
HOH
HOH
919
C
HOH
54
5
HOH
HOH
920
C
HOH
63
5
HOH
HOH
921
C
HOH
78
5
HOH
HOH
922
C
HOH
79
5
HOH
HOH
923
C
HOH
80
5
HOH
HOH
924
C
HOH
87
5
HOH
HOH
925
C
HOH
88
5
HOH
HOH
926
C
HOH
90
5
HOH
HOH
927
C
HOH
94
5
HOH
HOH
928
C
HOH
100
5
HOH
HOH
929
C
HOH
101
5
HOH
HOH
930
C
HOH
105
5
HOH
HOH
931
C
HOH
110
5
HOH
HOH
932
C
HOH
114
5
HOH
HOH
933
C
HOH
116
5
HOH
HOH
934
C
HOH
120
5
HOH
HOH
935
C
HOH
121
5
HOH
HOH
936
C
HOH
124
5
HOH
HOH
937
C
HOH
125
5
HOH
HOH
938
C
HOH
127
5
HOH
HOH
939
C
HOH
24
5
HOH
HOH
42
D
HOH
33
5
HOH
HOH
43
D
HOH
38
5
HOH
HOH
44
D
HOH
43
5
HOH
HOH
45
D
HOH
45
5
HOH
HOH
46
D
HOH
47
5
HOH
HOH
47
D
HOH
55
5
HOH
HOH
48
D
HOH
95
5
HOH
HOH
49
D
HOH
113
5
HOH
HOH
50
D
HOH
115
5
HOH
HOH
51
D
n
1
-9
A
n
2
-8
A
n
3
-7
A
n
4
-6
A
n
5
-5
A
n
6
-4
A
n
7
-3
A
n
8
-2
A
MET
-1
n
9
MET
-1
A
GLY
0
n
10
GLY
0
A
ALA
1
n
11
ALA
1
A
PRO
2
n
12
PRO
2
A
ILE
3
n
13
ILE
3
A
THR
4
n
14
THR
4
A
ALA
5
n
15
ALA
5
A
TYR
6
n
16
TYR
6
A
ALA
7
n
17
ALA
7
A
GLN
8
n
18
GLN
8
A
GLN
9
n
19
GLN
9
A
THR
10
n
20
THR
10
A
ARG
11
n
21
ARG
11
A
GLY
12
n
22
GLY
12
A
LEU
13
n
23
LEU
13
A
LEU
14
n
24
LEU
14
A
GLY
15
n
25
GLY
15
A
CYS
16
n
26
CYS
16
A
ILE
17
n
27
ILE
17
A
ILE
18
n
28
ILE
18
A
THR
19
n
29
THR
19
A
SER
20
n
30
SER
20
A
LEU
21
n
31
LEU
21
A
THR
22
n
32
THR
22
A
GLY
23
n
33
GLY
23
A
ARG
24
n
34
ARG
24
A
ASP
25
n
35
ASP
25
A
LYS
26
n
36
LYS
26
A
ASN
27
n
37
ASN
27
A
GLN
28
n
38
GLN
28
A
VAL
29
n
39
VAL
29
A
GLU
30
n
40
GLU
30
A
GLY
31
n
41
GLY
31
A
GLU
32
n
42
GLU
32
A
VAL
33
n
43
VAL
33
A
GLN
34
n
44
GLN
34
A
ILE
35
n
45
ILE
35
A
VAL
36
n
46
VAL
36
A
SER
37
n
47
SER
37
A
THR
38
n
48
THR
38
A
ALA
39
n
49
ALA
39
A
THR
40
n
50
THR
40
A
GLN
41
n
51
GLN
41
A
THR
42
n
52
THR
42
A
PHE
43
n
53
PHE
43
A
LEU
44
n
54
LEU
44
A
ALA
45
n
55
ALA
45
A
THR
46
n
56
THR
46
A
CYS
47
n
57
CYS
47
A
ILE
48
n
58
ILE
48
A
ASN
49
n
59
ASN
49
A
GLY
50
n
60
GLY
50
A
VAL
51
n
61
VAL
51
A
CYS
52
n
62
CYS
52
A
TRP
53
n
63
TRP
53
A
THR
54
n
64
THR
54
A
VAL
55
n
65
VAL
55
A
TYR
56
n
66
TYR
56
A
HIS
57
n
67
HIS
57
A
GLY
58
n
68
GLY
58
A
ALA
59
n
69
ALA
59
A
GLY
60
n
70
GLY
60
A
THR
61
n
71
THR
61
A
ARG
62
n
72
ARG
62
A
THR
63
n
73
THR
63
A
ILE
64
n
74
ILE
64
A
ALA
65
n
75
ALA
65
A
SER
66
n
76
SER
66
A
PRO
67
n
77
PRO
67
A
LYS
68
n
78
LYS
68
A
GLY
69
n
79
GLY
69
A
PRO
70
n
80
PRO
70
A
VAL
71
n
81
VAL
71
A
ILE
72
n
82
ILE
72
A
GLN
73
n
83
GLN
73
A
MET
74
n
84
MET
74
A
TYR
75
n
85
TYR
75
A
THR
76
n
86
THR
76
A
ASN
77
n
87
ASN
77
A
VAL
78
n
88
VAL
78
A
ASP
79
n
89
ASP
79
A
GLN
80
n
90
GLN
80
A
ASP
81
n
91
ASP
81
A
LEU
82
n
92
LEU
82
A
VAL
83
n
93
VAL
83
A
GLY
84
n
94
GLY
84
A
TRP
85
n
95
TRP
85
A
PRO
86
n
96
PRO
86
A
ALA
87
n
97
ALA
87
A
PRO
88
n
98
PRO
88
A
GLN
89
n
99
GLN
89
A
GLY
90
n
100
GLY
90
A
SER
91
n
101
SER
91
A
ARG
92
n
102
ARG
92
A
SER
93
n
103
SER
93
A
LEU
94
n
104
LEU
94
A
THR
95
n
105
THR
95
A
PRO
96
n
106
PRO
96
A
CYS
97
n
107
CYS
97
A
THR
98
n
108
THR
98
A
CYS
99
n
109
CYS
99
A
GLY
100
n
110
GLY
100
A
SER
101
n
111
SER
101
A
SER
102
n
112
SER
102
A
ASP
103
n
113
ASP
103
A
LEU
104
n
114
LEU
104
A
TYR
105
n
115
TYR
105
A
LEU
106
n
116
LEU
106
A
VAL
107
n
117
VAL
107
A
THR
108
n
118
THR
108
A
ARG
109
n
119
ARG
109
A
HIS
110
n
120
HIS
110
A
ALA
111
n
121
ALA
111
A
ASP
112
n
122
ASP
112
A
VAL
113
n
123
VAL
113
A
ILE
114
n
124
ILE
114
A
PRO
115
n
125
PRO
115
A
VAL
116
n
126
VAL
116
A
ARG
117
n
127
ARG
117
A
ARG
118
n
128
ARG
118
A
ARG
119
n
129
ARG
119
A
GLY
120
n
130
GLY
120
A
ASP
121
n
131
ASP
121
A
SER
122
n
132
SER
122
A
ARG
123
n
133
ARG
123
A
GLY
124
n
134
GLY
124
A
SER
125
n
135
SER
125
A
LEU
126
n
136
LEU
126
A
LEU
127
n
137
LEU
127
A
SER
128
n
138
SER
128
A
PRO
129
n
139
PRO
129
A
ARG
130
n
140
ARG
130
A
PRO
131
n
141
PRO
131
A
ILE
132
n
142
ILE
132
A
SER
133
n
143
SER
133
A
TYR
134
n
144
TYR
134
A
LEU
135
n
145
LEU
135
A
LYS
136
n
146
LYS
136
A
GLY
137
n
147
GLY
137
A
SER
138
n
148
SER
138
A
SER
139
n
149
SER
139
A
GLY
140
n
150
GLY
140
A
GLY
141
n
151
GLY
141
A
PRO
142
n
152
PRO
142
A
LEU
143
n
153
LEU
143
A
LEU
144
n
154
LEU
144
A
CYS
145
n
155
CYS
145
A
PRO
146
n
156
PRO
146
A
ALA
147
n
157
ALA
147
A
GLY
148
n
158
GLY
148
A
HIS
149
n
159
HIS
149
A
ALA
150
n
160
ALA
150
A
VAL
151
n
161
VAL
151
A
GLY
152
n
162
GLY
152
A
LEU
153
n
163
LEU
153
A
PHE
154
n
164
PHE
154
A
ARG
155
n
165
ARG
155
A
ALA
156
n
166
ALA
156
A
ALA
157
n
167
ALA
157
A
VAL
158
n
168
VAL
158
A
CYS
159
n
169
CYS
159
A
THR
160
n
170
THR
160
A
ARG
161
n
171
ARG
161
A
GLY
162
n
172
GLY
162
A
VAL
163
n
173
VAL
163
A
ALA
164
n
174
ALA
164
A
LYS
165
n
175
LYS
165
A
ALA
166
n
176
ALA
166
A
VAL
167
n
177
VAL
167
A
ASP
168
n
178
ASP
168
A
PHE
169
n
179
PHE
169
A
ILE
170
n
180
ILE
170
A
PRO
171
n
181
PRO
171
A
VAL
172
n
182
VAL
172
A
GLU
173
n
183
GLU
173
A
ASN
174
n
184
ASN
174
A
LEU
175
n
185
LEU
175
A
GLU
176
n
186
GLU
176
A
THR
177
n
187
THR
177
A
THR
178
n
188
THR
178
A
MET
179
n
189
MET
179
A
ARG
180
n
190
ARG
180
A
SER
181
n
191
SER
181
A
n
192
182
A
n
193
183
A
n
194
184
A
n
195
185
A
n
196
186
A
n
197
187
A
n
198
188
A
n
199
189
A
n
1
19
B
LYS
20
n
2
LYS
20
B
GLY
21
n
3
GLY
21
B
SER
22
n
4
SER
22
B
VAL
23
n
5
VAL
23
B
VAL
24
n
6
VAL
24
B
ILE
25
n
7
ILE
25
B
VAL
26
n
8
VAL
26
B
GLY
27
n
9
GLY
27
B
ARG
28
n
10
ARG
28
B
ILE
29
n
11
ILE
29
B
VAL
30
n
12
VAL
30
B
LEU
31
n
13
LEU
31
B
SER
32
n
14
SER
32
B
GLY
33
n
15
GLY
33
B
LYS
34
n
16
LYS
34
B
PRO
35
n
17
PRO
35
B
ALA
36
n
18
ALA
36
B
ILE
37
n
19
ILE
37
B
ILE
38
n
20
ILE
38
B
PRO
39
n
21
PRO
39
B
LYS
40
n
22
LYS
40
B
LYS
41
n
23
LYS
41
B
n
1
-9
C
n
2
-8
C
n
3
-7
C
n
4
-6
C
n
5
-5
C
n
6
-4
C
n
7
-3
C
n
8
-2
C
n
9
-1
C
n
10
0
C
n
11
1
C
n
12
2
C
n
13
3
C
n
14
4
C
n
15
5
C
n
16
6
C
n
17
7
C
n
18
8
C
n
19
9
C
n
20
10
C
n
21
11
C
n
22
12
C
n
23
13
C
n
24
14
C
n
25
15
C
n
26
16
C
n
27
17
C
n
28
18
C
n
29
19
C
n
30
20
C
n
31
21
C
n
32
22
C
n
33
23
C
n
34
24
C
n
35
25
C
n
36
26
C
n
37
27
C
GLN
28
n
38
GLN
28
C
VAL
29
n
39
VAL
29
C
GLU
30
n
40
GLU
30
C
GLY
31
n
41
GLY
31
C
GLU
32
n
42
GLU
32
C
VAL
33
n
43
VAL
33
C
GLN
34
n
44
GLN
34
C
ILE
35
n
45
ILE
35
C
VAL
36
n
46
VAL
36
C
SER
37
n
47
SER
37
C
THR
38
n
48
THR
38
C
ALA
39
n
49
ALA
39
C
THR
40
n
50
THR
40
C
GLN
41
n
51
GLN
41
C
THR
42
n
52
THR
42
C
PHE
43
n
53
PHE
43
C
LEU
44
n
54
LEU
44
C
ALA
45
n
55
ALA
45
C
THR
46
n
56
THR
46
C
CYS
47
n
57
CYS
47
C
ILE
48
n
58
ILE
48
C
ASN
49
n
59
ASN
49
C
GLY
50
n
60
GLY
50
C
VAL
51
n
61
VAL
51
C
CYS
52
n
62
CYS
52
C
TRP
53
n
63
TRP
53
C
THR
54
n
64
THR
54
C
VAL
55
n
65
VAL
55
C
TYR
56
n
66
TYR
56
C
HIS
57
n
67
HIS
57
C
GLY
58
n
68
GLY
58
C
ALA
59
n
69
ALA
59
C
GLY
60
n
70
GLY
60
C
THR
61
n
71
THR
61
C
ARG
62
n
72
ARG
62
C
THR
63
n
73
THR
63
C
ILE
64
n
74
ILE
64
C
ALA
65
n
75
ALA
65
C
SER
66
n
76
SER
66
C
PRO
67
n
77
PRO
67
C
LYS
68
n
78
LYS
68
C
GLY
69
n
79
GLY
69
C
PRO
70
n
80
PRO
70
C
VAL
71
n
81
VAL
71
C
ILE
72
n
82
ILE
72
C
GLN
73
n
83
GLN
73
C
MET
74
n
84
MET
74
C
TYR
75
n
85
TYR
75
C
THR
76
n
86
THR
76
C
ASN
77
n
87
ASN
77
C
VAL
78
n
88
VAL
78
C
ASP
79
n
89
ASP
79
C
GLN
80
n
90
GLN
80
C
ASP
81
n
91
ASP
81
C
LEU
82
n
92
LEU
82
C
VAL
83
n
93
VAL
83
C
GLY
84
n
94
GLY
84
C
TRP
85
n
95
TRP
85
C
PRO
86
n
96
PRO
86
C
ALA
87
n
97
ALA
87
C
PRO
88
n
98
PRO
88
C
GLN
89
n
99
GLN
89
C
GLY
90
n
100
GLY
90
C
SER
91
n
101
SER
91
C
ARG
92
n
102
ARG
92
C
SER
93
n
103
SER
93
C
LEU
94
n
104
LEU
94
C
THR
95
n
105
THR
95
C
PRO
96
n
106
PRO
96
C
CYS
97
n
107
CYS
97
C
THR
98
n
108
THR
98
C
CYS
99
n
109
CYS
99
C
GLY
100
n
110
GLY
100
C
SER
101
n
111
SER
101
C
SER
102
n
112
SER
102
C
ASP
103
n
113
ASP
103
C
LEU
104
n
114
LEU
104
C
TYR
105
n
115
TYR
105
C
LEU
106
n
116
LEU
106
C
VAL
107
n
117
VAL
107
C
THR
108
n
118
THR
108
C
ARG
109
n
119
ARG
109
C
HIS
110
n
120
HIS
110
C
ALA
111
n
121
ALA
111
C
ASP
112
n
122
ASP
112
C
VAL
113
n
123
VAL
113
C
ILE
114
n
124
ILE
114
C
PRO
115
n
125
PRO
115
C
VAL
116
n
126
VAL
116
C
ARG
117
n
127
ARG
117
C
ARG
118
n
128
ARG
118
C
ARG
119
n
129
ARG
119
C
GLY
120
n
130
GLY
120
C
ASP
121
n
131
ASP
121
C
SER
122
n
132
SER
122
C
ARG
123
n
133
ARG
123
C
GLY
124
n
134
GLY
124
C
SER
125
n
135
SER
125
C
LEU
126
n
136
LEU
126
C
LEU
127
n
137
LEU
127
C
SER
128
n
138
SER
128
C
PRO
129
n
139
PRO
129
C
ARG
130
n
140
ARG
130
C
PRO
131
n
141
PRO
131
C
ILE
132
n
142
ILE
132
C
SER
133
n
143
SER
133
C
TYR
134
n
144
TYR
134
C
LEU
135
n
145
LEU
135
C
LYS
136
n
146
LYS
136
C
GLY
137
n
147
GLY
137
C
SER
138
n
148
SER
138
C
SER
139
n
149
SER
139
C
GLY
140
n
150
GLY
140
C
GLY
141
n
151
GLY
141
C
PRO
142
n
152
PRO
142
C
LEU
143
n
153
LEU
143
C
LEU
144
n
154
LEU
144
C
CYS
145
n
155
CYS
145
C
PRO
146
n
156
PRO
146
C
ALA
147
n
157
ALA
147
C
GLY
148
n
158
GLY
148
C
HIS
149
n
159
HIS
149
C
ALA
150
n
160
ALA
150
C
VAL
151
n
161
VAL
151
C
GLY
152
n
162
GLY
152
C
LEU
153
n
163
LEU
153
C
PHE
154
n
164
PHE
154
C
ARG
155
n
165
ARG
155
C
ALA
156
n
166
ALA
156
C
ALA
157
n
167
ALA
157
C
VAL
158
n
168
VAL
158
C
CYS
159
n
169
CYS
159
C
THR
160
n
170
THR
160
C
ARG
161
n
171
ARG
161
C
GLY
162
n
172
GLY
162
C
VAL
163
n
173
VAL
163
C
ALA
164
n
174
ALA
164
C
LYS
165
n
175
LYS
165
C
ALA
166
n
176
ALA
166
C
VAL
167
n
177
VAL
167
C
ASP
168
n
178
ASP
168
C
PHE
169
n
179
PHE
169
C
ILE
170
n
180
ILE
170
C
PRO
171
n
181
PRO
171
C
VAL
172
n
182
VAL
172
C
GLU
173
n
183
GLU
173
C
ASN
174
n
184
ASN
174
C
LEU
175
n
185
LEU
175
C
GLU
176
n
186
GLU
176
C
THR
177
n
187
THR
177
C
THR
178
n
188
THR
178
C
MET
179
n
189
MET
179
C
n
190
180
C
n
191
181
C
n
192
182
C
n
193
183
C
n
194
184
C
n
195
185
C
n
196
186
C
n
197
187
C
n
198
188
C
n
199
189
C
n
1
19
D
n
2
20
D
GLY
21
n
3
GLY
21
D
SER
22
n
4
SER
22
D
VAL
23
n
5
VAL
23
D
VAL
24
n
6
VAL
24
D
ILE
25
n
7
ILE
25
D
VAL
26
n
8
VAL
26
D
GLY
27
n
9
GLY
27
D
ARG
28
n
10
ARG
28
D
ILE
29
n
11
ILE
29
D
VAL
30
n
12
VAL
30
D
LEU
31
n
13
LEU
31
D
SER
32
n
14
SER
32
D
GLY
33
n
15
GLY
33
D
LYS
34
n
16
LYS
34
D
PRO
35
n
17
PRO
35
D
ALA
36
n
18
ALA
36
D
n
19
37
D
n
20
38
D
n
21
39
D
n
22
40
D
n
23
41
D
author_and_software_defined_assembly
PISA
2
dimeric
author_and_software_defined_assembly
PISA
2
dimeric
software_defined_assembly
PISA
4
tetrameric
3760
-57
9940
1700
-45
7960
7780
-125
15590
A
CYS
97
A
SG
CYS
107
1_555
A
ZN
901
E
ZN
ZN
1_555
A
CYS
145
A
SG
CYS
155
1_555
97.6
A
CYS
97
A
SG
CYS
107
1_555
A
ZN
901
E
ZN
ZN
1_555
A
HOH
1013
H
O
HOH
1_555
117.9
A
CYS
145
A
SG
CYS
155
1_555
A
ZN
901
E
ZN
ZN
1_555
A
HOH
1013
H
O
HOH
1_555
120.3
A
CYS
97
A
SG
CYS
107
1_555
A
ZN
901
E
ZN
ZN
1_555
A
CYS
99
A
SG
CYS
109
1_555
92.7
A
CYS
145
A
SG
CYS
155
1_555
A
ZN
901
E
ZN
ZN
1_555
A
CYS
99
A
SG
CYS
109
1_555
115.2
A
HOH
1013
H
O
HOH
1_555
A
ZN
901
E
ZN
ZN
1_555
A
CYS
99
A
SG
CYS
109
1_555
109.6
C
CYS
99
C
SG
CYS
109
1_555
C
ZN
902
G
ZN
ZN
1_555
C
CYS
145
C
SG
CYS
155
1_555
114.1
C
CYS
99
C
SG
CYS
109
1_555
C
ZN
902
G
ZN
ZN
1_555
C
HOH
903
J
O
HOH
1_555
106.6
C
CYS
145
C
SG
CYS
155
1_555
C
ZN
902
G
ZN
ZN
1_555
C
HOH
903
J
O
HOH
1_555
123.3
C
CYS
99
C
SG
CYS
109
1_555
C
ZN
902
G
ZN
ZN
1_555
C
CYS
97
C
SG
CYS
107
1_555
100.1
C
CYS
145
C
SG
CYS
155
1_555
C
ZN
902
G
ZN
ZN
1_555
C
CYS
97
C
SG
CYS
107
1_555
99.2
C
HOH
903
J
O
HOH
1_555
C
ZN
902
G
ZN
ZN
1_555
C
CYS
97
C
SG
CYS
107
1_555
110.9
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
TYR
6
A
N
TYR
16
B
O
VAL
30
B
O
VAL
12
B
O
VAL
26
B
O
VAL
8
A
N
ILE
35
A
N
ILE
45
A
N
GLN
34
A
N
GLN
44
A
O
ALA
45
A
O
ALA
55
A
N
THR
46
A
N
THR
56
A
O
TRP
53
A
O
TRP
63
A
N
CYS
52
A
N
CYS
62
A
O
TRP
85
A
O
TRP
95
A
O
LEU
82
A
O
LEU
92
A
N
ASN
77
A
N
ASN
87
A
N
ILE
64
A
N
ILE
74
A
O
VAL
71
A
O
VAL
81
A
N
LEU
106
A
N
LEU
116
A
O
ILE
114
A
O
ILE
124
A
N
ARG
117
A
N
ARG
127
A
O
SER
125
A
O
SER
135
A
N
LEU
126
A
N
LEU
136
A
O
LYS
165
A
O
LYS
175
A
O
ASP
168
A
O
ASP
178
A
N
ALA
156
A
N
ALA
166
A
O
VAL
151
A
O
VAL
161
A
N
LEU
143
A
N
LEU
153
A
O
LEU
144
A
O
LEU
154
A
N
TYR
105
A
N
TYR
115
B
N
ALA
36
B
N
ALA
18
D
O
VAL
30
D
O
VAL
12
D
O
VAL
23
D
O
VAL
5
C
N
THR
63
C
N
THR
73
B
N
ALA
36
B
N
ALA
18
D
O
VAL
30
D
O
VAL
12
D
O
VAL
26
D
O
VAL
8
C
N
ILE
35
C
N
ILE
45
C
N
VAL
36
C
N
VAL
46
C
O
PHE
43
C
O
PHE
53
C
N
ILE
48
C
N
ILE
58
C
O
VAL
51
C
O
VAL
61
C
N
CYS
52
C
N
CYS
62
C
O
TRP
85
C
O
TRP
95
C
O
GLY
84
C
O
GLY
94
C
N
TYR
75
C
N
TYR
85
C
N
LEU
106
C
N
LEU
116
C
O
ILE
114
C
O
ILE
124
C
N
ARG
117
C
N
ARG
127
C
O
SER
125
C
O
SER
135
C
N
ARG
130
C
N
ARG
140
C
O
ALA
164
C
O
ALA
174
C
O
ASP
168
C
O
ASP
178
C
N
ALA
156
C
N
ALA
166
C
O
VAL
151
C
O
VAL
161
C
N
LEU
143
C
N
LEU
153
C
O
LEU
144
C
O
LEU
154
C
N
TYR
105
C
N
TYR
115
1
A
ALA
-9
A
ALA
1
1
Y
1
A
SER
-8
A
SER
2
1
Y
1
A
MET
-7
A
MET
3
1
Y
1
A
THR
-6
A
THR
4
1
Y
1
A
GLY
-5
A
GLY
5
1
Y
1
A
GLY
-4
A
GLY
6
1
Y
1
A
GLN
-3
A
GLN
7
1
Y
1
A
GLN
-2
A
GLN
8
1
Y
1
A
GLY
182
A
GLY
192
1
Y
1
A
SER
183
A
SER
193
1
Y
1
A
HIS
184
A
HIS
194
1
Y
1
A
HIS
185
A
HIS
195
1
Y
1
A
HIS
186
A
HIS
196
1
Y
1
A
HIS
187
A
HIS
197
1
Y
1
A
HIS
188
A
HIS
198
1
Y
1
A
HIS
189
A
HIS
199
1
Y
1
B
LYS
19
B
LYS
1
1
Y
1
C
ALA
-9
C
ALA
1
1
Y
1
C
SER
-8
C
SER
2
1
Y
1
C
MET
-7
C
MET
3
1
Y
1
C
THR
-6
C
THR
4
1
Y
1
C
GLY
-5
C
GLY
5
1
Y
1
C
GLY
-4
C
GLY
6
1
Y
1
C
GLN
-3
C
GLN
7
1
Y
1
C
GLN
-2
C
GLN
8
1
Y
1
C
MET
-1
C
MET
9
1
Y
1
C
GLY
0
C
GLY
10
1
Y
1
C
ALA
1
C
ALA
11
1
Y
1
C
PRO
2
C
PRO
12
1
Y
1
C
ILE
3
C
ILE
13
1
Y
1
C
THR
4
C
THR
14
1
Y
1
C
ALA
5
C
ALA
15
1
Y
1
C
TYR
6
C
TYR
16
1
Y
1
C
ALA
7
C
ALA
17
1
Y
1
C
GLN
8
C
GLN
18
1
Y
1
C
GLN
9
C
GLN
19
1
Y
1
C
THR
10
C
THR
20
1
Y
1
C
ARG
11
C
ARG
21
1
Y
1
C
GLY
12
C
GLY
22
1
Y
1
C
LEU
13
C
LEU
23
1
Y
1
C
LEU
14
C
LEU
24
1
Y
1
C
GLY
15
C
GLY
25
1
Y
1
C
CYS
16
C
CYS
26
1
Y
1
C
ILE
17
C
ILE
27
1
Y
1
C
ILE
18
C
ILE
28
1
Y
1
C
THR
19
C
THR
29
1
Y
1
C
SER
20
C
SER
30
1
Y
1
C
LEU
21
C
LEU
31
1
Y
1
C
THR
22
C
THR
32
1
Y
1
C
GLY
23
C
GLY
33
1
Y
1
C
ARG
24
C
ARG
34
1
Y
1
C
ASP
25
C
ASP
35
1
Y
1
C
LYS
26
C
LYS
36
1
Y
1
C
ASN
27
C
ASN
37
1
Y
1
C
ARG
180
C
ARG
190
1
Y
1
C
SER
181
C
SER
191
1
Y
1
C
GLY
182
C
GLY
192
1
Y
1
C
SER
183
C
SER
193
1
Y
1
C
HIS
184
C
HIS
194
1
Y
1
C
HIS
185
C
HIS
195
1
Y
1
C
HIS
186
C
HIS
196
1
Y
1
C
HIS
187
C
HIS
197
1
Y
1
C
HIS
188
C
HIS
198
1
Y
1
C
HIS
189
C
HIS
199
1
Y
1
D
LYS
19
D
LYS
1
1
Y
1
D
LYS
20
D
LYS
2
1
Y
1
D
ILE
37
D
ILE
19
1
Y
1
D
ILE
38
D
ILE
20
1
Y
1
D
PRO
39
D
PRO
21
1
Y
1
D
LYS
40
D
LYS
22
1
Y
1
D
LYS
41
D
LYS
23
1
Y
1
A
C29
NHN
999
PLANAR
1
A
TYR
105
0.064
SIDE CHAIN
1
-9.71
1.50
119.30
109.59
A
A
A
C
N
CA
ALA
PRO
PRO
1
2
2
Y
1
A
ALA
1
-39.97
-112.30
1
A
THR
38
-108.33
-166.84
1
A
PHE
43
-148.09
-159.01
1
A
ASP
81
70.02
38.50
1
A
CYS
99
-162.15
1.81
1
A
ALA
111
71.25
33.39
1
A
ASP
121
66.79
-46.72
1
A
PRO
146
-43.79
-16.88
1
C
PHE
154
-54.66
109.10
0.276
0.204
0.204
2.50
8.00
2252
24995
22899
RANDOM
1
THROUGHOUT
1.000
FOURIER SYNTHESIS
Engh & Huber
2.50
8.00
128
2935
59
0
2748
0.008
1.82
1.36
0.3523
0.348
2.61
254
2249
90.00
43.24
2.500
100.000
2GVF
25194
2.560
0.073
1
22.2000
5.000
99.9
2.50
2.59
2.600
0.547
5.00
99.9
data collection
ADSC
data reduction
DENZO
model building
X-PLOR
refinement
X-PLOR
98.1
data scaling
SCALEPACK
phasing
X-PLOR
polyprotein
HCV NS3-4A protease domain complexed with a macrocyclic ketoamide inhibitor, SCH419021
1
N
N
2
N
N
1
N
N
2
N
N
3
N
N
4
N
N
3
N
N
5
N
N
5
N
N
5
N
N
5
N
N
The asymmetric unit contains a dimer of the NS3 protease domain, with each monomer complexed with a molecule of the NS4a peptide. Both monomers of the NS3-4a complex have a structurally bound zinc atom. The Chain A monomer of the NS3-4a complex has a covalently bound ketoamide, with a linkage between Ser139 OG and C38 of the ketoamide. The NS3 protease domain is part of the larger NS3 protease-helicase protein that is catalytically active when complexed with the NS4a protein. The NS3 protease domain-NS4a peptide complex is catalytically active, but this is not the biologically active form.
A
GLY
12
A
GLY
22
HELX_P
A
GLY
23
A
GLY
33
1
1
12
A
TYR
56
A
TYR
66
HELX_P
A
GLY
60
A
GLY
70
1
2
5
A
ILE
132
A
ILE
142
HELX_P
A
LYS
136
A
LYS
146
1
3
5
A
VAL
172
A
VAL
182
HELX_P
A
SER
181
A
SER
191
1
4
10
C
TYR
56
C
TYR
66
HELX_P
C
GLY
60
C
GLY
70
1
5
5
C
ILE
132
C
ILE
142
HELX_P
C
LYS
136
C
LYS
146
1
6
5
C
VAL
172
C
VAL
182
HELX_P
C
MET
179
C
MET
189
1
7
8
covale
1.411
A
SER
139
A
OG
SER
149
1_555
A
NHN
999
F
C38
NHN
1_555
metalc
2.034
A
ZN
901
E
ZN
ZN
1_555
A
CYS
97
A
SG
CYS
107
1_555
metalc
2.268
A
ZN
901
E
ZN
ZN
1_555
A
CYS
145
A
SG
CYS
155
1_555
metalc
1.528
A
ZN
901
E
ZN
ZN
1_555
A
HOH
1013
H
O
HOH
1_555
metalc
2.394
A
ZN
901
E
ZN
ZN
1_555
A
CYS
99
A
SG
CYS
109
1_555
metalc
2.163
C
ZN
902
G
ZN
ZN
1_555
C
CYS
99
C
SG
CYS
109
1_555
metalc
2.142
C
ZN
902
G
ZN
ZN
1_555
C
CYS
145
C
SG
CYS
155
1_555
metalc
2.183
C
ZN
902
G
ZN
ZN
1_555
C
HOH
903
J
O
HOH
1_555
metalc
2.100
C
ZN
902
G
ZN
ZN
1_555
C
CYS
97
C
SG
CYS
107
1_555
HYDROLASE
hepatitis C, protease, ketoamide inhibitor, HYDROLASE
NP_671491
GB
1
1027
22129793
APITAYAQQTRGLLGCIITSLTGRDKNQVEGEVQIVSTATQTFLATCINGVCWTVYHGAGTRTIASPKGPVIQMYTNVDQ
DLVGWPAPQGSRSLTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRPISYLKGSSGGPLLCPAGHAVGLFRAAVCT
RGVAKAVDFIPVENLETTMRS
NP_671491
GB
2
1680
22129793
VVIVGRIVLSGKPAIIP
1027
1207
2GVF
1
181
22129793
A
1
11
191
1027
1207
2GVF
1
181
22129793
C
1
11
191
1680
1696
2GVF
23
39
22129793
B
2
5
21
1680
1696
2GVF
23
39
22129793
D
2
5
21
1
CLONING ARTIFACT
ALA
-9
2GVF
A
22129793
GB
1
1
CLONING ARTIFACT
SER
-8
2GVF
A
22129793
GB
2
1
CLONING ARTIFACT
MET
-7
2GVF
A
22129793
GB
3
1
CLONING ARTIFACT
THR
-6
2GVF
A
22129793
GB
4
1
CLONING ARTIFACT
GLY
-5
2GVF
A
22129793
GB
5
1
CLONING ARTIFACT
GLY
-4
2GVF
A
22129793
GB
6
1
CLONING ARTIFACT
GLN
-3
2GVF
A
22129793
GB
7
1
CLONING ARTIFACT
GLN
-2
2GVF
A
22129793
GB
8
1
CLONING ARTIFACT
MET
-1
2GVF
A
22129793
GB
9
1
CLONING ARTIFACT
GLY
0
2GVF
A
22129793
GB
10
1
CLONING ARTIFACT
GLY
182
2GVF
A
22129793
GB
192
1
CLONING ARTIFACT
SER
183
2GVF
A
22129793
GB
193
1
EXPRESSION TAG
HIS
184
2GVF
A
22129793
GB
194
1
EXPRESSION TAG
HIS
185
2GVF
A
22129793
GB
195
1
EXPRESSION TAG
HIS
186
2GVF
A
22129793
GB
196
1
EXPRESSION TAG
HIS
187
2GVF
A
22129793
GB
197
1
EXPRESSION TAG
HIS
188
2GVF
A
22129793
GB
198
1
EXPRESSION TAG
HIS
189
2GVF
A
22129793
GB
199
2
CLONING ARTIFACT
ALA
-9
2GVF
C
22129793
GB
1
2
CLONING ARTIFACT
SER
-8
2GVF
C
22129793
GB
2
2
CLONING ARTIFACT
MET
-7
2GVF
C
22129793
GB
3
2
CLONING ARTIFACT
THR
-6
2GVF
C
22129793
GB
4
2
CLONING ARTIFACT
GLY
-5
2GVF
C
22129793
GB
5
2
CLONING ARTIFACT
GLY
-4
2GVF
C
22129793
GB
6
2
CLONING ARTIFACT
GLN
-3
2GVF
C
22129793
GB
7
2
CLONING ARTIFACT
GLN
-2
2GVF
C
22129793
GB
8
2
CLONING ARTIFACT
MET
-1
2GVF
C
22129793
GB
9
2
CLONING ARTIFACT
GLY
0
2GVF
C
22129793
GB
10
2
CLONING ARTIFACT
GLY
182
2GVF
C
22129793
GB
192
2
CLONING ARTIFACT
SER
183
2GVF
C
22129793
GB
193
2
EXPRESSION TAG
HIS
184
2GVF
C
22129793
GB
194
2
EXPRESSION TAG
HIS
185
2GVF
C
22129793
GB
195
2
EXPRESSION TAG
HIS
186
2GVF
C
22129793
GB
196
2
EXPRESSION TAG
HIS
187
2GVF
C
22129793
GB
197
2
EXPRESSION TAG
HIS
188
2GVF
C
22129793
GB
198
2
EXPRESSION TAG
HIS
189
2GVF
C
22129793
GB
199
3
INSERTION
LYS
19
2GVF
B
22129793
GB
1
3
INSERTION
LYS
20
2GVF
B
22129793
GB
2
3
INSERTION
GLY
21
2GVF
B
22129793
GB
3
3
INSERTION
SER
22
2GVF
B
22129793
GB
4
3
INSERTION
LYS
40
2GVF
B
22129793
GB
22
3
INSERTION
LYS
41
2GVF
B
22129793
GB
23
4
INSERTION
LYS
19
2GVF
D
22129793
GB
1
4
INSERTION
LYS
20
2GVF
D
22129793
GB
2
4
INSERTION
GLY
21
2GVF
D
22129793
GB
3
4
INSERTION
SER
22
2GVF
D
22129793
GB
4
4
INSERTION
LYS
40
2GVF
D
22129793
GB
22
4
INSERTION
LYS
41
2GVF
D
22129793
GB
23
7
2
7
3
7
7
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TYR
6
A
TYR
16
A
GLN
9
A
GLN
19
B
VAL
24
B
VAL
6
B
VAL
30
B
VAL
12
A
VAL
33
A
VAL
43
A
SER
37
A
SER
47
A
THR
42
A
THR
52
A
ILE
48
A
ILE
58
A
VAL
51
A
VAL
61
A
VAL
55
A
VAL
65
A
LEU
82
A
LEU
92
A
PRO
86
A
PRO
96
A
TYR
75
A
TYR
85
A
ASN
77
A
ASN
87
A
ILE
64
A
ILE
74
A
SER
66
A
SER
76
A
GLY
69
A
GLY
79
A
VAL
71
A
VAL
81
A
ASP
103
A
ASP
113
A
VAL
107
A
VAL
117
A
VAL
113
A
VAL
123
A
ARG
118
A
ARG
128
A
ARG
123
A
ARG
133
A
PRO
131
A
PRO
141
A
VAL
163
A
VAL
173
A
PRO
171
A
PRO
181
A
HIS
149
A
HIS
159
A
THR
160
A
THR
170
A
PRO
142
A
PRO
152
A
CYS
145
A
CYS
155
A
ASP
103
A
ASP
113
A
VAL
107
A
VAL
117
B
ALA
36
B
ALA
18
B
ILE
37
B
ILE
19
D
SER
22
D
SER
4
D
VAL
30
D
VAL
12
C
THR
63
C
THR
73
C
ILE
64
C
ILE
74
B
ALA
36
B
ALA
18
B
ILE
37
B
ILE
19
D
SER
22
D
SER
4
D
VAL
30
D
VAL
12
C
VAL
33
C
VAL
43
C
SER
37
C
SER
47
C
THR
42
C
THR
52
C
ILE
48
C
ILE
58
C
VAL
51
C
VAL
61
C
VAL
55
C
VAL
65
C
LEU
82
C
LEU
92
C
PRO
86
C
PRO
96
C
TYR
75
C
TYR
85
C
ASN
77
C
ASN
87
C
ASP
103
C
ASP
113
C
VAL
107
C
VAL
117
C
VAL
113
C
VAL
123
C
GLY
120
C
GLY
130
C
ARG
123
C
ARG
133
C
PRO
131
C
PRO
141
C
VAL
163
C
VAL
173
C
PRO
171
C
PRO
181
C
ALA
150
C
ALA
160
C
CYS
159
C
CYS
169
C
PRO
142
C
PRO
152
C
LEU
144
C
LEU
154
C
ASP
103
C
ASP
113
C
VAL
107
C
VAL
117
BINDING SITE FOR RESIDUE ZN A 901
Software
5
BINDING SITE FOR RESIDUE ZN C 902
Software
4
BINDING SITE FOR RESIDUE NHN A 999
Software
14
A
CYS
97
A
CYS
107
5
1_555
A
THR
98
A
THR
108
5
1_555
A
CYS
99
A
CYS
109
5
1_555
A
CYS
145
A
CYS
155
5
1_555
A
HOH
1013
H
HOH
5
1_555
C
CYS
97
C
CYS
107
4
1_555
C
CYS
99
C
CYS
109
4
1_555
C
CYS
145
C
CYS
155
4
1_555
C
HOH
903
J
HOH
4
1_555
A
GLN
41
A
GLN
51
14
1_555
A
THR
42
A
THR
52
14
1_555
A
HIS
57
A
HIS
67
14
1_555
A
ILE
132
A
ILE
142
14
1_555
A
LYS
136
A
LYS
146
14
1_555
A
GLY
137
A
GLY
147
14
1_555
A
SER
138
A
SER
148
14
1_555
A
SER
139
A
SER
149
14
1_555
A
ARG
155
A
ARG
165
14
1_555
A
ALA
156
A
ALA
166
14
1_555
A
ALA
157
A
ALA
167
14
1_555
A
CYS
159
A
CYS
169
14
1_555
A
ASP
168
A
ASP
178
14
1_555
A
HOH
1016
H
HOH
14
1_555
155
H 3 2