0.016949 0.000000 0.000000 0.000000 0.016949 0.000000 0.000000 0.000000 0.003731 0.00000 0.00000 0.00000 Bornholdt, Z.A. Prasad, B.V. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.000 90.000 90.000 59.000 59.000 268.022 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C N S -1 58.082 THIOCYANATE ION non-polymer C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Nat.Struct.Mol.Biol. 1545-9993 13 559 560 10.1038/nsmb1099 16715094 X-ray structure of influenza virus NS1 effector domain. 2006 200 1 CCD 2005-12-13 ADSC QUANTUM 315 SAGITALLY FOCUSED Si(111) SINGLE WAVELENGTH M x-ray 1 0.97909 1.0 19-ID APS 0.97909 SYNCHROTRON APS BEAMLINE 19-ID 14736.932 NS1 Effector Domain NS1 Effector Domain 2 man polymer 58.082 THIOCYANATE ION 3 syn non-polymer 18.015 water 270 nat water Nonstructural protein NS1 no yes (MSE)T(MSE)ASVPASRYLTD(MSE)TLEE(MSE)SRDWS(MSE)LIPKQKVAGPLCIR(MSE)DQAI(MSE)DKNIIL KANFSVIFDRLETLILLRAFTEEGAIVGEISPLPSLPGHTAEDVKNAVGVLIGGLEWNDNTVRVSETLQRFAWRSSN MTMASVPASRYLTDMTLEEMSRDWSMLIPKQKVAGPLCIRMDQAIMDKNIILKANFSVIFDRLETLILLRAFTEEGAIVG EISPLPSLPGHTAEDVKNAVGVLIGGLEWNDNTVRVSETLQRFAWRSSN A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n A/Puerto Rico/8/34 Escherichia sample Segment 8 - NS1 11309 unidentified influenza virus 562 Escherichia coli 1 3.96 68.90 VAPOR DIFFUSION, HANGING DROP 6.8 200 mM NaSCN, 100 mM Hepes pH 6.8, 16% PEG 3350, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K 298.0 software struct struct_conn struct_ref_seq_dif struct_site repository Initial release Version format compliance Advisory Version format compliance Refinement description Database references Derived calculations Structure summary 1 0 2006-05-30 1 1 2008-05-01 1 2 2011-07-13 1 3 2017-10-18 1 4 2020-09-09 _software.classification _software.contact_author _software.contact_author_email _software.date _software.language _software.location _software.name _software.type _software.version _struct.title _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id N RCSB Y RCSB 2006-05-08 REL REL SCN THIOCYANATE ION HOH water SCN 9901 2 SCN SCN 9901 A SCN 9903 2 SCN SCN 9903 A SCN 9902 2 SCN SCN 9902 B HOH 209 3 HOH HOH 211 A HOH 211 3 HOH HOH 212 A HOH 212 3 HOH HOH 213 A HOH 213 3 HOH HOH 214 A HOH 214 3 HOH HOH 215 A HOH 216 3 HOH HOH 216 A HOH 217 3 HOH HOH 217 A HOH 1199 3 HOH HOH 218 A HOH 2191 3 HOH HOH 219 A HOH 3295 3 HOH HOH 220 A HOH 4199 3 HOH HOH 221 A HOH 4594 3 HOH HOH 222 A HOH 4695 3 HOH HOH 223 A HOH 5091 3 HOH HOH 224 A HOH 1222 3 HOH HOH 9904 A HOH 1252 3 HOH HOH 9905 A HOH 1223 3 HOH HOH 9906 A HOH 1263 3 HOH HOH 9907 A HOH 5214 3 HOH HOH 9908 A HOH 1236 3 HOH HOH 9909 A HOH 5218 3 HOH HOH 9910 A HOH 1110 3 HOH HOH 9911 A HOH 1210 3 HOH HOH 9912 A HOH 1410 3 HOH HOH 9913 A HOH 1111 3 HOH HOH 9914 A HOH 1311 3 HOH HOH 9915 A HOH 1411 3 HOH HOH 9916 A HOH 1112 3 HOH HOH 9917 A HOH 1312 3 HOH HOH 9918 A HOH 1412 3 HOH HOH 9919 A HOH 1512 3 HOH HOH 9920 A HOH 1413 3 HOH HOH 9921 A HOH 1216 3 HOH HOH 9922 A HOH 1316 3 HOH HOH 9923 A HOH 1317 3 HOH HOH 9924 A HOH 1118 3 HOH HOH 9925 A HOH 1218 3 HOH HOH 9926 A HOH 22 3 HOH HOH 9927 A HOH 23 3 HOH HOH 9928 A HOH 24 3 HOH HOH 9929 A HOH 25 3 HOH HOH 9930 A HOH 26 3 HOH HOH 9931 A HOH 30 3 HOH HOH 9932 A HOH 36 3 HOH HOH 9933 A HOH 41 3 HOH HOH 9934 A HOH 43 3 HOH HOH 9935 A HOH 44 3 HOH HOH 9936 A HOH 45 3 HOH HOH 9937 A HOH 52 3 HOH HOH 9938 A HOH 53 3 HOH HOH 9939 A HOH 56 3 HOH HOH 9940 A HOH 58 3 HOH HOH 9941 A HOH 59 3 HOH HOH 9942 A HOH 61 3 HOH HOH 9943 A HOH 63 3 HOH HOH 9944 A HOH 64 3 HOH HOH 9945 A HOH 65 3 HOH HOH 9946 A HOH 68 3 HOH HOH 9947 A HOH 70 3 HOH HOH 9948 A HOH 72 3 HOH HOH 9949 A HOH 73 3 HOH HOH 9950 A HOH 75 3 HOH HOH 9951 A HOH 83 3 HOH HOH 9952 A HOH 86 3 HOH HOH 9953 A HOH 88 3 HOH HOH 9954 A HOH 89 3 HOH HOH 9955 A HOH 90 3 HOH HOH 9956 A HOH 91 3 HOH HOH 9957 A HOH 92 3 HOH HOH 9958 A HOH 93 3 HOH HOH 9959 A HOH 94 3 HOH HOH 9960 A HOH 95 3 HOH HOH 9961 A HOH 96 3 HOH HOH 9962 A HOH 99 3 HOH HOH 9963 A HOH 101 3 HOH HOH 9964 A HOH 103 3 HOH HOH 9965 A HOH 106 3 HOH HOH 9966 A HOH 111 3 HOH HOH 9967 A HOH 112 3 HOH HOH 9968 A HOH 114 3 HOH HOH 9969 A HOH 115 3 HOH HOH 9970 A HOH 116 3 HOH HOH 9971 A HOH 121 3 HOH HOH 9972 A HOH 125 3 HOH HOH 9973 A HOH 126 3 HOH HOH 9974 A HOH 128 3 HOH HOH 9975 A HOH 130 3 HOH HOH 9976 A HOH 133 3 HOH HOH 9977 A HOH 135 3 HOH HOH 9978 A HOH 138 3 HOH HOH 9979 A HOH 144 3 HOH HOH 9980 A HOH 146 3 HOH HOH 9981 A HOH 148 3 HOH HOH 9982 A HOH 149 3 HOH HOH 9983 A HOH 155 3 HOH HOH 9984 A HOH 159 3 HOH HOH 9985 A HOH 173 3 HOH HOH 9986 A HOH 175 3 HOH HOH 9987 A HOH 176 3 HOH HOH 9988 A HOH 177 3 HOH HOH 9989 A HOH 183 3 HOH HOH 9990 A HOH 188 3 HOH HOH 9991 A HOH 189 3 HOH HOH 9992 A HOH 193 3 HOH HOH 9993 A HOH 195 3 HOH HOH 9994 A HOH 200 3 HOH HOH 9995 A HOH 201 3 HOH HOH 9996 A HOH 206 3 HOH HOH 9997 A HOH 207 3 HOH HOH 9998 A HOH 208 3 HOH HOH 9999 A HOH 140 3 HOH HOH 211 B HOH 141 3 HOH HOH 212 B HOH 142 3 HOH HOH 213 B HOH 145 3 HOH HOH 214 B HOH 147 3 HOH HOH 215 B HOH 151 3 HOH HOH 216 B HOH 152 3 HOH HOH 217 B HOH 153 3 HOH HOH 218 B HOH 154 3 HOH HOH 219 B HOH 156 3 HOH HOH 220 B HOH 157 3 HOH HOH 221 B HOH 158 3 HOH HOH 222 B HOH 160 3 HOH HOH 223 B HOH 161 3 HOH HOH 224 B HOH 163 3 HOH HOH 225 B HOH 164 3 HOH HOH 226 B HOH 165 3 HOH HOH 227 B HOH 166 3 HOH HOH 228 B HOH 167 3 HOH HOH 229 B HOH 168 3 HOH HOH 230 B HOH 169 3 HOH HOH 231 B HOH 170 3 HOH HOH 232 B HOH 171 3 HOH HOH 233 B HOH 172 3 HOH HOH 234 B HOH 174 3 HOH HOH 235 B HOH 178 3 HOH HOH 236 B HOH 179 3 HOH HOH 237 B HOH 180 3 HOH HOH 238 B HOH 181 3 HOH HOH 239 B HOH 182 3 HOH HOH 240 B HOH 184 3 HOH HOH 241 B HOH 185 3 HOH HOH 242 B HOH 186 3 HOH HOH 243 B HOH 187 3 HOH HOH 244 B HOH 190 3 HOH HOH 245 B HOH 191 3 HOH HOH 246 B HOH 192 3 HOH HOH 247 B HOH 194 3 HOH HOH 248 B HOH 196 3 HOH HOH 249 B HOH 197 3 HOH HOH 250 B HOH 198 3 HOH HOH 251 B HOH 199 3 HOH HOH 252 B HOH 202 3 HOH HOH 253 B HOH 203 3 HOH HOH 254 B HOH 205 3 HOH HOH 255 B HOH 210 3 HOH HOH 256 B HOH 219 3 HOH HOH 257 B HOH 222 3 HOH HOH 258 B HOH 1299 3 HOH HOH 259 B HOH 1399 3 HOH HOH 260 B HOH 1499 3 HOH HOH 261 B HOH 1599 3 HOH HOH 262 B HOH 2391 3 HOH HOH 263 B HOH 3195 3 HOH HOH 264 B HOH 3395 3 HOH HOH 265 B HOH 3495 3 HOH HOH 266 B HOH 3595 3 HOH HOH 267 B HOH 4392 3 HOH HOH 268 B HOH 4493 3 HOH HOH 269 B HOH 4796 3 HOH HOH 270 B HOH 6091 3 HOH HOH 271 B HOH 7092 3 HOH HOH 272 B HOH 4291 3 HOH HOH 273 B HOH 5212 3 HOH HOH 9903 B HOH 1232 3 HOH HOH 9904 B HOH 5213 3 HOH HOH 9905 B HOH 1233 3 HOH HOH 9906 B HOH 1243 3 HOH HOH 9907 B HOH 1253 3 HOH HOH 9908 B HOH 1224 3 HOH HOH 9909 B HOH 1234 3 HOH HOH 9910 B HOH 1244 3 HOH HOH 9911 B HOH 1254 3 HOH HOH 9912 B HOH 5216 3 HOH HOH 9913 B HOH 1226 3 HOH HOH 9914 B HOH 1246 3 HOH HOH 9915 B HOH 1256 3 HOH HOH 9916 B HOH 1266 3 HOH HOH 9917 B HOH 5217 3 HOH HOH 9918 B HOH 1227 3 HOH HOH 9919 B HOH 1237 3 HOH HOH 9920 B HOH 1247 3 HOH HOH 9921 B HOH 1257 3 HOH HOH 9922 B HOH 1267 3 HOH HOH 9923 B HOH 1228 3 HOH HOH 9924 B HOH 1238 3 HOH HOH 9925 B HOH 1248 3 HOH HOH 9926 B HOH 1258 3 HOH HOH 9927 B HOH 1310 3 HOH HOH 9928 B HOH 1510 3 HOH HOH 9929 B HOH 1610 3 HOH HOH 9930 B HOH 1211 3 HOH HOH 9931 B HOH 1511 3 HOH HOH 9932 B HOH 1212 3 HOH HOH 9933 B HOH 1612 3 HOH HOH 9934 B HOH 1113 3 HOH HOH 9935 B HOH 1213 3 HOH HOH 9936 B HOH 1313 3 HOH HOH 9937 B HOH 1513 3 HOH HOH 9938 B HOH 1114 3 HOH HOH 9939 B HOH 1214 3 HOH HOH 9940 B HOH 1115 3 HOH HOH 9941 B HOH 1215 3 HOH HOH 9942 B HOH 1315 3 HOH HOH 9943 B HOH 1116 3 HOH HOH 9944 B HOH 1117 3 HOH HOH 9945 B HOH 1217 3 HOH HOH 9946 B HOH 1120 3 HOH HOH 9947 B HOH 1220 3 HOH HOH 9948 B HOH 28 3 HOH HOH 9949 B HOH 31 3 HOH HOH 9950 B HOH 32 3 HOH HOH 9951 B HOH 35 3 HOH HOH 9952 B HOH 38 3 HOH HOH 9953 B HOH 39 3 HOH HOH 9954 B HOH 42 3 HOH HOH 9955 B HOH 47 3 HOH HOH 9956 B HOH 48 3 HOH HOH 9957 B HOH 49 3 HOH HOH 9958 B HOH 50 3 HOH HOH 9959 B HOH 51 3 HOH HOH 9960 B HOH 54 3 HOH HOH 9961 B HOH 55 3 HOH HOH 9962 B HOH 57 3 HOH HOH 9963 B HOH 60 3 HOH HOH 9964 B HOH 62 3 HOH HOH 9965 B HOH 66 3 HOH HOH 9966 B HOH 67 3 HOH HOH 9967 B HOH 69 3 HOH HOH 9968 B HOH 71 3 HOH HOH 9969 B HOH 74 3 HOH HOH 9970 B HOH 76 3 HOH HOH 9971 B HOH 78 3 HOH HOH 9972 B HOH 79 3 HOH HOH 9973 B HOH 80 3 HOH HOH 9974 B HOH 81 3 HOH HOH 9975 B HOH 82 3 HOH HOH 9976 B HOH 85 3 HOH HOH 9977 B HOH 87 3 HOH HOH 9978 B HOH 97 3 HOH HOH 9979 B HOH 98 3 HOH HOH 9980 B HOH 100 3 HOH HOH 9981 B HOH 102 3 HOH HOH 9982 B HOH 105 3 HOH HOH 9983 B HOH 110 3 HOH HOH 9984 B HOH 113 3 HOH HOH 9985 B HOH 117 3 HOH HOH 9986 B HOH 118 3 HOH HOH 9987 B HOH 119 3 HOH HOH 9988 B HOH 120 3 HOH HOH 9989 B HOH 122 3 HOH HOH 9990 B HOH 123 3 HOH HOH 9991 B HOH 124 3 HOH HOH 9992 B HOH 129 3 HOH HOH 9993 B HOH 131 3 HOH HOH 9994 B HOH 132 3 HOH HOH 9995 B HOH 134 3 HOH HOH 9996 B HOH 136 3 HOH HOH 9997 B HOH 137 3 HOH HOH 9998 B HOH 139 3 HOH HOH 9999 B 33.897 21.535 12.743 S 20.00 1.000 50.016 18.506 10.346 S 20.00 0.994 18.436 17.218 15.004 S 20.00 0.911 6.851 15.778 4.784 S 20.00 0.893 2.093 16.338 11.334 S 20.00 0.856 45.262 13.521 6.259 S 20.00 0.852 29.496 19.605 14.058 S 20.00 0.792 -1.470 4.076 11.931 S 20.00 0.536 4.869 25.074 -0.103 S 20.00 0.400 22.869 19.477 13.896 S 20.00 0.371 11.374 12.696 28.464 S 20.00 0.346 9.135 23.312 23.769 S 20.00 0.312 39.622 11.198 -4.364 S 20.00 0.164 16.608 18.921 12.410 S 20.00 0.153 15.386 16.664 13.170 S 20.00 0.144 43.699 15.406 3.420 S 20.00 0.144 7.693 16.062 10.659 S 20.00 0.125 18.934 34.879 10.743 S 20.00 0.116 -3.644 17.285 29.048 S 20.00 0.104 17.505 14.097 11.915 S 20.00 0.091 49.459 17.082 14.182 S 20.00 0.079 32.604 21.159 16.215 S 20.00 0.036 Solvent flattening and Histogram matching 33028 78.600 0.719 502 66.400 0.854 512 66.100 0.843 617 63.100 0.885 679 61.600 0.887 728 60.800 0.893 802 63.000 0.869 863 62.300 0.880 910 60.300 0.879 950 64.300 0.860 1032 61.900 0.861 1069 64.200 0.835 1104 62.500 0.828 1121 64.900 0.801 1186 63.400 0.816 1222 66.300 0.794 1253 63.400 0.782 1272 68.400 0.768 1338 64.200 0.777 1345 67.400 0.759 1381 70.800 0.747 1434 68.400 0.727 1422 72.700 0.721 1512 72.200 0.699 1497 73.800 0.706 1543 77.200 0.698 1544 76.800 0.686 1618 79.100 0.630 2572 MSE 79 n 1 MSE 79 A THR 80 n 2 THR 80 A MSE 81 n 3 MSE 81 A ALA 82 n 4 ALA 82 A SER 83 n 5 SER 83 A VAL 84 n 6 VAL 84 A PRO 85 n 7 PRO 85 A ALA 86 n 8 ALA 86 A SER 87 n 9 SER 87 A ARG 88 n 10 ARG 88 A TYR 89 n 11 TYR 89 A LEU 90 n 12 LEU 90 A THR 91 n 13 THR 91 A ASP 92 n 14 ASP 92 A MSE 93 n 15 MSE 93 A THR 94 n 16 THR 94 A LEU 95 n 17 LEU 95 A GLU 96 n 18 GLU 96 A GLU 97 n 19 GLU 97 A MSE 98 n 20 MSE 98 A SER 99 n 21 SER 99 A ARG 100 n 22 ARG 100 A ASP 101 n 23 ASP 101 A TRP 102 n 24 TRP 102 A SER 103 n 25 SER 103 A MSE 104 n 26 MSE 104 A LEU 105 n 27 LEU 105 A ILE 106 n 28 ILE 106 A PRO 107 n 29 PRO 107 A LYS 108 n 30 LYS 108 A GLN 109 n 31 GLN 109 A LYS 110 n 32 LYS 110 A VAL 111 n 33 VAL 111 A ALA 112 n 34 ALA 112 A GLY 113 n 35 GLY 113 A PRO 114 n 36 PRO 114 A LEU 115 n 37 LEU 115 A CYS 116 n 38 CYS 116 A ILE 117 n 39 ILE 117 A ARG 118 n 40 ARG 118 A MSE 119 n 41 MSE 119 A ASP 120 n 42 ASP 120 A GLN 121 n 43 GLN 121 A ALA 122 n 44 ALA 122 A ILE 123 n 45 ILE 123 A MSE 124 n 46 MSE 124 A ASP 125 n 47 ASP 125 A LYS 126 n 48 LYS 126 A ASN 127 n 49 ASN 127 A ILE 128 n 50 ILE 128 A ILE 129 n 51 ILE 129 A LEU 130 n 52 LEU 130 A LYS 131 n 53 LYS 131 A ALA 132 n 54 ALA 132 A ASN 133 n 55 ASN 133 A PHE 134 n 56 PHE 134 A SER 135 n 57 SER 135 A VAL 136 n 58 VAL 136 A ILE 137 n 59 ILE 137 A PHE 138 n 60 PHE 138 A ASP 139 n 61 ASP 139 A ARG 140 n 62 ARG 140 A LEU 141 n 63 LEU 141 A GLU 142 n 64 GLU 142 A THR 143 n 65 THR 143 A LEU 144 n 66 LEU 144 A ILE 145 n 67 ILE 145 A LEU 146 n 68 LEU 146 A LEU 147 n 69 LEU 147 A ARG 148 n 70 ARG 148 A ALA 149 n 71 ALA 149 A PHE 150 n 72 PHE 150 A THR 151 n 73 THR 151 A GLU 152 n 74 GLU 152 A GLU 153 n 75 GLU 153 A GLY 154 n 76 GLY 154 A ALA 155 n 77 ALA 155 A ILE 156 n 78 ILE 156 A VAL 157 n 79 VAL 157 A GLY 158 n 80 GLY 158 A GLU 159 n 81 GLU 159 A ILE 160 n 82 ILE 160 A SER 161 n 83 SER 161 A PRO 162 n 84 PRO 162 A LEU 163 n 85 LEU 163 A PRO 164 n 86 PRO 164 A SER 165 n 87 SER 165 A LEU 166 n 88 LEU 166 A PRO 167 n 89 PRO 167 A GLY 168 n 90 GLY 168 A HIS 169 n 91 HIS 169 A THR 170 n 92 THR 170 A ALA 171 n 93 ALA 171 A GLU 172 n 94 GLU 172 A ASP 173 n 95 ASP 173 A VAL 174 n 96 VAL 174 A LYS 175 n 97 LYS 175 A ASN 176 n 98 ASN 176 A ALA 177 n 99 ALA 177 A VAL 178 n 100 VAL 178 A GLY 179 n 101 GLY 179 A VAL 180 n 102 VAL 180 A LEU 181 n 103 LEU 181 A ILE 182 n 104 ILE 182 A GLY 183 n 105 GLY 183 A GLY 184 n 106 GLY 184 A LEU 185 n 107 LEU 185 A GLU 186 n 108 GLU 186 A TRP 187 n 109 TRP 187 A ASN 188 n 110 ASN 188 A ASP 189 n 111 ASP 189 A ASN 190 n 112 ASN 190 A THR 191 n 113 THR 191 A VAL 192 n 114 VAL 192 A ARG 193 n 115 ARG 193 A VAL 194 n 116 VAL 194 A SER 195 n 117 SER 195 A GLU 196 n 118 GLU 196 A THR 197 n 119 THR 197 A LEU 198 n 120 LEU 198 A GLN 199 n 121 GLN 199 A ARG 200 n 122 ARG 200 A PHE 201 n 123 PHE 201 A ALA 202 n 124 ALA 202 A TRP 203 n 125 TRP 203 A ARG 204 n 126 ARG 204 A SER 205 n 127 SER 205 A n 128 206 A n 129 207 A n 1 79 B n 2 80 B n 3 81 B n 4 82 B n 5 83 B n 6 84 B n 7 85 B ALA 86 n 8 ALA 86 B SER 87 n 9 SER 87 B ARG 88 n 10 ARG 88 B TYR 89 n 11 TYR 89 B LEU 90 n 12 LEU 90 B THR 91 n 13 THR 91 B ASP 92 n 14 ASP 92 B MSE 93 n 15 MSE 93 B THR 94 n 16 THR 94 B LEU 95 n 17 LEU 95 B GLU 96 n 18 GLU 96 B GLU 97 n 19 GLU 97 B MSE 98 n 20 MSE 98 B SER 99 n 21 SER 99 B ARG 100 n 22 ARG 100 B ASP 101 n 23 ASP 101 B TRP 102 n 24 TRP 102 B SER 103 n 25 SER 103 B MSE 104 n 26 MSE 104 B LEU 105 n 27 LEU 105 B ILE 106 n 28 ILE 106 B PRO 107 n 29 PRO 107 B LYS 108 n 30 LYS 108 B GLN 109 n 31 GLN 109 B LYS 110 n 32 LYS 110 B VAL 111 n 33 VAL 111 B ALA 112 n 34 ALA 112 B GLY 113 n 35 GLY 113 B PRO 114 n 36 PRO 114 B LEU 115 n 37 LEU 115 B CYS 116 n 38 CYS 116 B ILE 117 n 39 ILE 117 B ARG 118 n 40 ARG 118 B MSE 119 n 41 MSE 119 B ASP 120 n 42 ASP 120 B GLN 121 n 43 GLN 121 B ALA 122 n 44 ALA 122 B ILE 123 n 45 ILE 123 B MSE 124 n 46 MSE 124 B ASP 125 n 47 ASP 125 B LYS 126 n 48 LYS 126 B ASN 127 n 49 ASN 127 B ILE 128 n 50 ILE 128 B ILE 129 n 51 ILE 129 B LEU 130 n 52 LEU 130 B LYS 131 n 53 LYS 131 B ALA 132 n 54 ALA 132 B ASN 133 n 55 ASN 133 B PHE 134 n 56 PHE 134 B SER 135 n 57 SER 135 B VAL 136 n 58 VAL 136 B ILE 137 n 59 ILE 137 B PHE 138 n 60 PHE 138 B ASP 139 n 61 ASP 139 B ARG 140 n 62 ARG 140 B LEU 141 n 63 LEU 141 B GLU 142 n 64 GLU 142 B THR 143 n 65 THR 143 B LEU 144 n 66 LEU 144 B ILE 145 n 67 ILE 145 B LEU 146 n 68 LEU 146 B LEU 147 n 69 LEU 147 B ARG 148 n 70 ARG 148 B ALA 149 n 71 ALA 149 B PHE 150 n 72 PHE 150 B THR 151 n 73 THR 151 B GLU 152 n 74 GLU 152 B GLU 153 n 75 GLU 153 B GLY 154 n 76 GLY 154 B ALA 155 n 77 ALA 155 B ILE 156 n 78 ILE 156 B VAL 157 n 79 VAL 157 B GLY 158 n 80 GLY 158 B GLU 159 n 81 GLU 159 B ILE 160 n 82 ILE 160 B SER 161 n 83 SER 161 B PRO 162 n 84 PRO 162 B LEU 163 n 85 LEU 163 B PRO 164 n 86 PRO 164 B SER 165 n 87 SER 165 B LEU 166 n 88 LEU 166 B PRO 167 n 89 PRO 167 B GLY 168 n 90 GLY 168 B HIS 169 n 91 HIS 169 B THR 170 n 92 THR 170 B ALA 171 n 93 ALA 171 B GLU 172 n 94 GLU 172 B ASP 173 n 95 ASP 173 B VAL 174 n 96 VAL 174 B LYS 175 n 97 LYS 175 B ASN 176 n 98 ASN 176 B ALA 177 n 99 ALA 177 B VAL 178 n 100 VAL 178 B GLY 179 n 101 GLY 179 B VAL 180 n 102 VAL 180 B LEU 181 n 103 LEU 181 B ILE 182 n 104 ILE 182 B GLY 183 n 105 GLY 183 B GLY 184 n 106 GLY 184 B LEU 185 n 107 LEU 185 B GLU 186 n 108 GLU 186 B TRP 187 n 109 TRP 187 B ASN 188 n 110 ASN 188 B ASP 189 n 111 ASP 189 B ASN 190 n 112 ASN 190 B THR 191 n 113 THR 191 B VAL 192 n 114 VAL 192 B ARG 193 n 115 ARG 193 B VAL 194 n 116 VAL 194 B SER 195 n 117 SER 195 B GLU 196 n 118 GLU 196 B THR 197 n 119 THR 197 B LEU 198 n 120 LEU 198 B GLN 199 n 121 GLN 199 B ARG 200 n 122 ARG 200 B PHE 201 n 123 PHE 201 B ALA 202 n 124 ALA 202 B TRP 203 n 125 TRP 203 B ARG 204 n 126 ARG 204 B SER 205 n 127 SER 205 B SER 206 n 128 SER 206 B ASN 207 n 129 ASN 207 B 4.4407 0.3464 -3.0112 0.8924 -0.9492 2.6314 -0.0741 -0.3064 0.0970 0.1212 0.0312 -0.0645 -0.0620 0.0457 0.0429 -0.1979 0.0227 -0.0282 0.1911 -0.0088 -0.1126 refined 39.4214 19.4780 17.0457 X-RAY DIFFRACTION 2.1810 0.1775 0.7655 0.8143 -0.0122 1.2415 -0.0627 -0.1129 -0.0407 0.0184 0.0520 -0.0154 -0.0814 0.0365 0.0107 -0.1872 0.0239 -0.0029 0.1479 -0.0200 -0.1018 refined 12.0410 20.8797 15.9008 X-RAY DIFFRACTION A 79 A 1 A 205 A 127 X-RAY DIFFRACTION 1 ALL B 86 B 8 B 207 B 129 X-RAY DIFFRACTION 2 ALL author_defined_assembly 2 dimeric A MSE 79 SELENOMETHIONINE A MSE 1 MET A MSE 81 SELENOMETHIONINE A MSE 3 MET A MSE 93 SELENOMETHIONINE A MSE 15 MET A MSE 98 SELENOMETHIONINE A MSE 20 MET A MSE 104 SELENOMETHIONINE A MSE 26 MET A MSE 119 SELENOMETHIONINE A MSE 41 MET A MSE 124 SELENOMETHIONINE A MSE 46 MET B MSE 93 SELENOMETHIONINE B MSE 15 MET B MSE 98 SELENOMETHIONINE B MSE 20 MET B MSE 104 SELENOMETHIONINE B MSE 26 MET B MSE 119 SELENOMETHIONINE B MSE 41 MET B MSE 124 SELENOMETHIONINE B MSE 46 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ALA 112 A N ALA 34 A O LEU 115 A O LEU 37 A N CYS 116 A N CYS 38 A O SER 161 A O SER 83 A O VAL 157 A O VAL 79 A N ALA 149 A N ALA 71 A O ILE 145 A O ILE 67 A N ASN 133 A N ASN 55 A O VAL 136 A O VAL 58 A N ARG 88 A N ARG 10 A N TYR 89 A N TYR 11 B O THR 91 B O THR 13 B N ARG 88 B N ARG 10 B O VAL 136 B O VAL 58 B N ASN 133 B N ASN 55 B O ILE 145 B O ILE 67 B N ALA 149 B N ALA 71 B O VAL 157 B O VAL 79 B O SER 161 B O SER 83 B N CYS 116 B N CYS 38 B O LEU 115 B O LEU 37 B N ALA 112 B N ALA 34 A O THR 191 A O THR 113 A N ILE 128 A N ILE 50 A O VAL 136 A O VAL 58 A N ARG 88 A N ARG 10 A N TYR 89 A N TYR 11 B O THR 91 B O THR 13 B N ARG 88 B N ARG 10 B O VAL 136 B O VAL 58 B N ILE 128 B N ILE 50 B O THR 191 B O THR 113 1 A SER 206 A SER 128 1 Y 1 A ASN 207 A ASN 129 1 Y 1 B MSE 79 B MSE 1 1 Y 1 B THR 80 B THR 2 1 Y 1 B MSE 81 B MSE 3 1 Y 1 B ALA 82 B ALA 4 1 Y 1 B SER 83 B SER 5 1 Y 1 B VAL 84 B VAL 6 1 Y 1 B PRO 85 B PRO 7 1 Y 1 A GLU 142 -108.69 -65.71 1 A TRP 203 76.69 -174.66 1 B GLU 142 -109.00 -72.35 39.881 1.180 0.000 0.000 1.180 0.000 -2.360 0.946 0.946 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.223 0.206 0.207 0.207 2.100 20.000 1432 28692 5.000 99.480 7.179 0.097 RANDOM LIKELY RESIDUAL 1 THROUGHOUT 0.00 SAD 0.154 0.137 0.800 0.800 1.200 MAXIMUM LIKELIHOOD WITH PHASES MASK 2.100 20.000 270 2229 9 0 1950 0.017 0.022 1989 1.654 1.973 2689 6.045 5.000 247 37.642 23.976 83 13.156 15.000 363 17.120 15.000 16 0.077 0.200 315 0.004 0.020 1452 0.233 0.200 889 0.298 0.200 1407 0.190 0.200 172 0.241 0.200 51 0.333 0.200 20 0.829 1.500 1246 1.614 2.000 2013 2.635 3.000 743 4.326 4.500 676 0.276 0.224 2.154 99 1940 2039 20 99.800 2.1 50 2GX9 28692 0 0 1 data reduction Zbyszek Otwinowski zbyszek@mix.swmed.edu http://www.lnls.br/infra/linhasluz/denzo-hkl.htm DENZO package data scaling Zbyszek Otwinowski zbyszek@mix.swmed.edu http://www.lnls.br/infra/linhasluz/denzo-hkl.htm SCALEPACK package phasing George Sheldrick gsheldr@shelx.uni-ac.gwdg.de Fortran_77 http://shelx.uni-ac.gwdg.de/SHELX/ SHELX package phasing K. Cowtan ccp4@dl.ac.uk Fortran_77 http://www.ccp4.ac.uk/main.html DM program 5.0 refinement Murshudov, G.N. ccp4@dl.ac.uk Fortran_77 http://www.ccp4.ac.uk/main.html REFMAC program data extraction PDB sw-help@rcsb.rutgers.edu April. 3, 2006 C++ http://pdb.rutgers.edu/software/ PDB_EXTRACT package 2.000 phasing SHELXD NS1 Effector Domain X-ray structure of influenza virus NS1 effector domain 1 N N 1 N N 2 N N 2 N N 2 N N 3 N N 3 N N A THR 94 A THR 16 HELX_P A ARG 100 A ARG 22 1 1 7 A THR 170 A THR 92 HELX_P A TRP 187 A TRP 109 1 2 18 A SER 195 A SER 117 HELX_P A ALA 202 A ALA 124 1 3 8 B THR 94 B THR 16 HELX_P B ARG 100 B ARG 22 1 4 7 B THR 170 B THR 92 HELX_P B ASN 188 B ASN 110 1 5 19 B SER 195 B SER 117 HELX_P B SER 206 B SER 128 1 6 12 covale 1.332 both A MSE 79 A C MSE 1 1_555 A THR 80 A N THR 2 1_555 covale 1.334 both A THR 80 A C THR 2 1_555 A MSE 81 A N MSE 3 1_555 covale 1.334 both A MSE 81 A C MSE 3 1_555 A ALA 82 A N ALA 4 1_555 covale 1.336 both A ASP 92 A C ASP 14 1_555 A MSE 93 A N MSE 15 1_555 covale 1.336 both A MSE 93 A C MSE 15 1_555 A THR 94 A N THR 16 1_555 covale 1.335 both A GLU 97 A C GLU 19 1_555 A MSE 98 A N MSE 20 1_555 covale 1.327 both A MSE 98 A C MSE 20 1_555 A SER 99 A N SER 21 1_555 covale 1.326 both A SER 103 A C SER 25 1_555 A MSE 104 A N MSE 26 1_555 covale 1.328 both A MSE 104 A C MSE 26 1_555 A LEU 105 A N LEU 27 1_555 covale 1.333 both A ARG 118 A C ARG 40 1_555 A MSE 119 A N MSE 41 1_555 covale 1.332 both A MSE 119 A C MSE 41 1_555 A ASP 120 A N ASP 42 1_555 covale 1.325 both A ILE 123 A C ILE 45 1_555 A MSE 124 A N MSE 46 1_555 covale 1.330 both A MSE 124 A C MSE 46 1_555 A ASP 125 A N ASP 47 1_555 covale 1.333 both B ASP 92 B C ASP 14 1_555 B MSE 93 B N MSE 15 1_555 covale 1.337 both B MSE 93 B C MSE 15 1_555 B THR 94 B N THR 16 1_555 covale 1.334 both B GLU 97 B C GLU 19 1_555 B MSE 98 B N MSE 20 1_555 covale 1.328 both B MSE 98 B C MSE 20 1_555 B SER 99 B N SER 21 1_555 covale 1.329 both B SER 103 B C SER 25 1_555 B MSE 104 B N MSE 26 1_555 covale 1.333 both B MSE 104 B C MSE 26 1_555 B LEU 105 B N LEU 27 1_555 covale 1.325 both B ARG 118 B C ARG 40 1_555 B MSE 119 B N MSE 41 1_555 covale 1.328 both B MSE 119 B C MSE 41 1_555 B ASP 120 B N ASP 42 1_555 covale 1.334 both B ILE 123 B C ILE 45 1_555 B MSE 124 B N MSE 46 1_555 covale 1.333 both B MSE 124 B C MSE 46 1_555 B ASP 125 B N ASP 47 1_555 TRANSCRIPTION, VIRUS/VIRAL PROTEIN NS1, Influenza, Effector Domain, alpha-helix beta-crescent, TRANSCRIPTION, VIRUS-VIRAL PROTEIN COMPLEX A TRP 203 A TRP 125 1 A ARG 204 A ARG 126 -5.37 Q71QT3_IAPUE UNP 1 80 Q71QT3 MTMASVPASRYLTDMTLEEMSRDWSMLIPKQKVAGPLCIRMDQAIMDKNIILKANFSVIFDRLETLILLRAFTEEGAIVG EISPLPSLPGHTAEDVKNAVGVLIGGLEWNDNTVRVSETLQRFAWRSSN 80 208 2GX9 79 207 Q71QT3 A 1 1 129 80 208 2GX9 79 207 Q71QT3 B 1 1 129 1 MET modified residue MSE 79 2GX9 A Q71QT3 UNP 80 1 1 MET modified residue MSE 81 2GX9 A Q71QT3 UNP 82 3 1 MET modified residue MSE 93 2GX9 A Q71QT3 UNP 94 15 1 MET modified residue MSE 98 2GX9 A Q71QT3 UNP 99 20 1 MET modified residue MSE 104 2GX9 A Q71QT3 UNP 105 26 1 MET modified residue MSE 119 2GX9 A Q71QT3 UNP 120 41 1 MET modified residue MSE 124 2GX9 A Q71QT3 UNP 125 46 2 MET modified residue MSE 79 2GX9 B Q71QT3 UNP 80 1 2 MET modified residue MSE 81 2GX9 B Q71QT3 UNP 82 3 2 MET modified residue MSE 93 2GX9 B Q71QT3 UNP 94 15 2 MET modified residue MSE 98 2GX9 B Q71QT3 UNP 99 20 2 MET modified residue MSE 104 2GX9 B Q71QT3 UNP 105 26 2 MET modified residue MSE 119 2GX9 B Q71QT3 UNP 120 41 2 MET modified residue MSE 124 2GX9 B Q71QT3 UNP 125 46 12 6 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel A PRO 107 A PRO 29 A ALA 112 A ALA 34 A LEU 115 A LEU 37 A ASP 120 A ASP 42 A ILE 156 A ILE 78 A PRO 162 A PRO 84 A ARG 140 A ARG 62 A THR 151 A THR 73 A ASN 127 A ASN 49 A ILE 137 A ILE 59 A ARG 88 A ARG 10 A THR 91 A THR 13 B ARG 88 B ARG 10 B THR 91 B THR 13 B ASN 127 B ASN 49 B ILE 137 B ILE 59 B ARG 140 B ARG 62 B THR 151 B THR 73 B ILE 156 B ILE 78 B PRO 162 B PRO 84 B LEU 115 B LEU 37 B ASP 120 B ASP 42 B PRO 107 B PRO 29 B ALA 112 B ALA 34 A THR 191 A THR 113 A VAL 194 A VAL 116 A ASN 127 A ASN 49 A ILE 137 A ILE 59 A ARG 88 A ARG 10 A THR 91 A THR 13 B ARG 88 B ARG 10 B THR 91 B THR 13 B ASN 127 B ASN 49 B ILE 137 B ILE 59 B THR 191 B THR 113 B VAL 194 B VAL 116 BINDING SITE FOR RESIDUE SCN A 9901 A SCN 9901 Software 6 BINDING SITE FOR RESIDUE SCN B 9902 B SCN 9902 Software 4 BINDING SITE FOR RESIDUE SCN A 9903 A SCN 9903 Software 5 A ILE 123 A ILE 45 6 1_555 A THR 151 A THR 73 6 1_555 A GLU 153 A GLU 75 6 1_555 A HOH 221 F HOH 6 1_555 A HOH 9957 F HOH 6 1_555 B PRO 164 B PRO 86 6 5_655 B LYS 126 B LYS 48 4 1_555 B ASN 127 B ASN 49 4 1_555 B GLU 152 B GLU 74 4 1_555 B GLU 153 B GLU 75 4 1_555 A TRP 102 A TRP 24 5 1_555 A SER 103 A SER 25 5 1_555 A ILE 156 A ILE 78 5 1_555 A HOH 9918 F HOH 5 1_555 A HOH 9957 F HOH 5 1_555 95 P 43 2 2