data_2GYX # _entry.id 2GYX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2GYX pdb_00002gyx 10.2210/pdb2gyx/pdb NDB DD0082 ? ? RCSB RCSB037719 ? ? WWPDB D_1000037719 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2GYX _pdbx_database_status.recvd_initial_deposition_date 2006-05-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lee, M.P.H.' 1 'Neidle, S.' 2 # _citation.id primary _citation.title ;Induced fit conformational changes of a "reversed amidine" heterocycle: optimized interactions in a DNA minor groove complex. ; _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 129 _citation.page_first 5688 _citation.page_last 5698 _citation.year 2007 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17425312 _citation.pdbx_database_id_DOI 10.1021/ja069003n # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Munde, M.' 1 ? primary 'Lee, M.P.H.' 2 ? primary 'Neidle, S.' 3 ? primary 'Arafa, R.' 4 ? primary 'Boykin, D.W.' 5 ? primary 'Liu, Y.' 6 ? primary 'Bailly, C.' 7 ? primary 'Wilson, W.D.' 8 ? # _cell.entry_id 2GYX _cell.length_a 24.380 _cell.length_b 40.102 _cell.length_c 65.627 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2GYX _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'" 3663.392 2 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn "N,N'-(1H-PYRROLE-2,5-DIYLDI-4,1-PHENYLENE)DIBENZENECARBOXIMIDAMIDE" 455.553 1 ? ? ? ? 4 water nat water 18.015 44 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DC)(DG)(DA)(DA)(DT)(DT)(DC)(DG)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGCGAATTCGCG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DC n 1 4 DG n 1 5 DA n 1 6 DA n 1 7 DT n 1 8 DT n 1 9 DC n 1 10 DG n 1 11 DC n 1 12 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'AT-RICH REGION IN THE GENOME OF ORGANISMS.' # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 2GYX _struct_ref.pdbx_db_accession 2GYX _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2GYX A 1 ? 12 ? 2GYX 1 ? 12 ? 1 12 2 1 2GYX B 1 ? 12 ? 2GYX 13 ? 24 ? 13 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 RKA non-polymer . "N,N'-(1H-PYRROLE-2,5-DIYLDI-4,1-PHENYLENE)DIBENZENECARBOXIMIDAMIDE" ? 'C30 H25 N5' 455.553 # _exptl.entry_id 2GYX _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.10 _exptl_crystal.density_percent_sol 41.36 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.00 _exptl_crystal_grow.pdbx_details 'MAGNESIUM CHLORIDE, MPD, DNA, COMPOUND DB 884, SODIUM CACODYLATE BUFFER, VAPOR DIFFUSION, SITTING DROP, temperature 293K, pH 7.00' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'MAGNESIUM CHLORIDE' ? ? ? 1 2 1 MPD ? ? ? 1 3 1 'SODIUM CACODYLATE' ? ? ? 1 4 1 H2O ? ? ? 1 5 2 'MAGNESIUM CHLORIDE' ? ? ? 1 6 2 MPD ? ? ? 1 7 2 'SODIUM CACODYLATE' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 105.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2006-02-10 _diffrn_detector.details 'OSMIC FOCUSING MIRROR SYSTEM' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'NI FILTER' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54178 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.54178 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2GYX _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 25.000 _reflns.d_resolution_high 1.860 _reflns.number_obs 5536 _reflns.number_all ? _reflns.percent_possible_obs 94.7 _reflns.pdbx_Rmerge_I_obs 0.043 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 35.9306 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.850 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.86 _reflns_shell.d_res_low 1.93 _reflns_shell.percent_possible_all 91.3 _reflns_shell.Rmerge_I_obs 0.214 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.3099 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2GYX _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all 5430 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 4.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.00 _refine.ls_d_res_high 1.86 _refine.ls_percent_reflns_obs 88.0 _refine.ls_R_factor_obs 0.23 _refine.ls_R_factor_all 0.236 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.327 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.129 _refine.ls_number_reflns_R_free 550 _refine.ls_number_parameters 2267 _refine.ls_number_restraints 2584 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'MOEWS & KRETSINGER, J.MOL.BIOL.91(1973)201-228' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'DNA PART OF NDB ENTRY GDL009 OR PDB ENTRY 2DBE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2GYX _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 0 _refine_analyze.occupancy_sum_hydrogen 0.00 _refine_analyze.occupancy_sum_non_hydrogen 566.00 _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 486 _refine_hist.pdbx_number_atoms_ligand 42 _refine_hist.number_atoms_solvent 38 _refine_hist.number_atoms_total 566 _refine_hist.d_res_high 1.86 _refine_hist.d_res_low 8.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.025 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.012 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.005 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.013 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.071 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.000 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 2GYX _pdbx_refine.R_factor_all_no_cutoff 0.236 _pdbx_refine.R_factor_obs_no_cutoff 0.23 _pdbx_refine.free_R_factor_no_cutoff 0.327 _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 10.129 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 550 _pdbx_refine.R_factor_all_4sig_cutoff 0.225 _pdbx_refine.R_factor_obs_4sig_cutoff 0.219 _pdbx_refine.free_R_factor_4sig_cutoff 0.31 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 10.102 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 483 _pdbx_refine.number_reflns_obs_4sig_cutoff 4781 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 2GYX _struct.title 'Crystal structure of DB884- D(CGCGAATTCGCG)2 complex at 1.86 A resolution.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2GYX _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'B-TYPE DUPLEX DNA, DOUBLE HELIX, DODECAMER, COMPOUND DB 884., DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details ? _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 26 A HOH 65 1_555 ? ? ? ? ? ? ? 2.124 ? ? metalc2 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 26 A HOH 66 1_555 ? ? ? ? ? ? ? 2.125 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 26 A HOH 67 1_555 ? ? ? ? ? ? ? 2.124 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 26 B HOH 64 1_555 ? ? ? ? ? ? ? 2.130 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 26 B HOH 65 1_555 ? ? ? ? ? ? ? 2.122 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 26 B HOH 66 1_555 ? ? ? ? ? ? ? 2.122 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 12 N1 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 12 O6 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 12 N2 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 11 N3 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 11 O2 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 11 N4 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 8 N3 ? ? A DA 5 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 8 O4 ? ? A DA 5 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 6 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 6 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 7 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 7 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 5 N1 ? ? A DT 8 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 5 N6 ? ? A DT 8 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 26 ? 6 'BINDING SITE FOR RESIDUE MG A 26' AC2 Software A RKA 25 ? 12 'BINDING SITE FOR RESIDUE RKA A 25' 1 ? ? ? ? ? ? ? # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HOH E . ? HOH A 65 . ? 1_555 ? 2 AC1 6 HOH E . ? HOH A 66 . ? 1_555 ? 3 AC1 6 HOH E . ? HOH A 67 . ? 1_555 ? 4 AC1 6 HOH F . ? HOH B 64 . ? 1_555 ? 5 AC1 6 HOH F . ? HOH B 65 . ? 1_555 ? 6 AC1 6 HOH F . ? HOH B 66 . ? 1_555 ? 7 AC2 12 DA A 5 ? DA A 5 . ? 1_555 ? 8 AC2 12 DA A 6 ? DA A 6 . ? 1_555 ? 9 AC2 12 DT A 7 ? DT A 7 . ? 1_555 ? 10 AC2 12 DT A 8 ? DT A 8 . ? 1_555 ? 11 AC2 12 DC A 9 ? DC A 9 . ? 1_555 ? 12 AC2 12 DG A 10 ? DG A 10 . ? 1_555 ? 13 AC2 12 HOH E . ? HOH A 60 . ? 1_555 ? 14 AC2 12 DA B 6 ? DA B 18 . ? 1_555 ? 15 AC2 12 DT B 7 ? DT B 19 . ? 1_555 ? 16 AC2 12 DT B 8 ? DT B 20 . ? 1_555 ? 17 AC2 12 DC B 9 ? DC B 21 . ? 1_555 ? 18 AC2 12 DG B 10 ? DG B 22 . ? 1_555 ? # _database_PDB_matrix.entry_id 2GYX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2GYX _atom_sites.fract_transf_matrix[1][1] 0.041017 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024936 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015238 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MG N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DC A 1 1 ? 19.373 34.658 24.270 1.00 50.61 ? 1 DC A "O5'" 1 ATOM 2 C "C5'" . DC A 1 1 ? 18.630 33.432 24.323 1.00 46.19 ? 1 DC A "C5'" 1 ATOM 3 C "C4'" . DC A 1 1 ? 19.573 32.253 24.411 1.00 33.08 ? 1 DC A "C4'" 1 ATOM 4 O "O4'" . DC A 1 1 ? 18.913 31.132 25.050 1.00 27.14 ? 1 DC A "O4'" 1 ATOM 5 C "C3'" . DC A 1 1 ? 20.068 31.730 23.066 1.00 29.93 ? 1 DC A "C3'" 1 ATOM 6 O "O3'" . DC A 1 1 ? 21.457 31.440 23.159 1.00 33.64 ? 1 DC A "O3'" 1 ATOM 7 C "C2'" . DC A 1 1 ? 19.213 30.518 22.810 1.00 27.56 ? 1 DC A "C2'" 1 ATOM 8 C "C1'" . DC A 1 1 ? 18.938 29.990 24.203 1.00 21.68 ? 1 DC A "C1'" 1 ATOM 9 N N1 . DC A 1 1 ? 17.645 29.332 24.407 1.00 25.64 ? 1 DC A N1 1 ATOM 10 C C2 . DC A 1 1 ? 17.622 28.090 25.059 1.00 21.56 ? 1 DC A C2 1 ATOM 11 O O2 . DC A 1 1 ? 18.699 27.607 25.430 1.00 30.52 ? 1 DC A O2 1 ATOM 12 N N3 . DC A 1 1 ? 16.441 27.471 25.256 1.00 20.44 ? 1 DC A N3 1 ATOM 13 C C4 . DC A 1 1 ? 15.310 28.037 24.835 1.00 21.77 ? 1 DC A C4 1 ATOM 14 N N4 . DC A 1 1 ? 14.144 27.413 25.035 1.00 21.08 ? 1 DC A N4 1 ATOM 15 C C5 . DC A 1 1 ? 15.307 29.300 24.169 1.00 21.45 ? 1 DC A C5 1 ATOM 16 C C6 . DC A 1 1 ? 16.482 29.901 23.982 1.00 18.84 ? 1 DC A C6 1 ATOM 17 P P . DG A 1 2 ? 22.417 31.050 21.946 1.00 38.56 ? 2 DG A P 1 ATOM 18 O OP1 . DG A 1 2 ? 23.813 31.347 22.358 1.00 38.80 ? 2 DG A OP1 1 ATOM 19 O OP2 . DG A 1 2 ? 21.868 31.623 20.697 1.00 33.64 ? 2 DG A OP2 1 ATOM 20 O "O5'" . DG A 1 2 ? 22.290 29.460 21.847 1.00 31.96 ? 2 DG A "O5'" 1 ATOM 21 C "C5'" . DG A 1 2 ? 23.131 28.665 22.708 1.00 25.30 ? 2 DG A "C5'" 1 ATOM 22 C "C4'" . DG A 1 2 ? 22.941 27.218 22.326 1.00 21.16 ? 2 DG A "C4'" 1 ATOM 23 O "O4'" . DG A 1 2 ? 21.586 26.822 22.618 1.00 25.24 ? 2 DG A "O4'" 1 ATOM 24 C "C3'" . DG A 1 2 ? 23.168 26.937 20.848 1.00 21.76 ? 2 DG A "C3'" 1 ATOM 25 O "O3'" . DG A 1 2 ? 24.036 25.819 20.713 1.00 31.71 ? 2 DG A "O3'" 1 ATOM 26 C "C2'" . DG A 1 2 ? 21.800 26.675 20.280 1.00 20.74 ? 2 DG A "C2'" 1 ATOM 27 C "C1'" . DG A 1 2 ? 21.065 26.122 21.491 1.00 29.59 ? 2 DG A "C1'" 1 ATOM 28 N N9 . DG A 1 2 ? 19.612 26.333 21.515 1.00 26.67 ? 2 DG A N9 1 ATOM 29 C C8 . DG A 1 2 ? 18.874 27.390 21.051 1.00 20.14 ? 2 DG A C8 1 ATOM 30 N N7 . DG A 1 2 ? 17.592 27.242 21.239 1.00 20.24 ? 2 DG A N7 1 ATOM 31 C C5 . DG A 1 2 ? 17.467 26.008 21.868 1.00 22.80 ? 2 DG A C5 1 ATOM 32 C C6 . DG A 1 2 ? 16.333 25.297 22.325 1.00 13.02 ? 2 DG A C6 1 ATOM 33 O O6 . DG A 1 2 ? 15.121 25.576 22.293 1.00 19.79 ? 2 DG A O6 1 ATOM 34 N N1 . DG A 1 2 ? 16.709 24.083 22.900 1.00 21.32 ? 2 DG A N1 1 ATOM 35 C C2 . DG A 1 2 ? 17.981 23.599 23.030 1.00 28.63 ? 2 DG A C2 1 ATOM 36 N N2 . DG A 1 2 ? 18.125 22.402 23.618 1.00 25.03 ? 2 DG A N2 1 ATOM 37 N N3 . DG A 1 2 ? 19.049 24.255 22.607 1.00 30.62 ? 2 DG A N3 1 ATOM 38 C C4 . DG A 1 2 ? 18.707 25.436 22.045 1.00 28.73 ? 2 DG A C4 1 ATOM 39 P P . DC A 1 3 ? 24.759 25.429 19.337 1.00 30.42 ? 3 DC A P 1 ATOM 40 O OP1 . DC A 1 3 ? 26.199 25.264 19.626 1.00 27.95 ? 3 DC A OP1 1 ATOM 41 O OP2 . DC A 1 3 ? 24.267 26.327 18.274 1.00 41.60 ? 3 DC A OP2 1 ATOM 42 O "O5'" . DC A 1 3 ? 24.135 23.973 19.081 1.00 29.09 ? 3 DC A "O5'" 1 ATOM 43 C "C5'" . DC A 1 3 ? 24.360 22.993 20.107 1.00 28.76 ? 3 DC A "C5'" 1 ATOM 44 C "C4'" . DC A 1 3 ? 23.265 21.959 20.073 1.00 26.13 ? 3 DC A "C4'" 1 ATOM 45 O "O4'" . DC A 1 3 ? 22.002 22.557 20.422 1.00 24.81 ? 3 DC A "O4'" 1 ATOM 46 C "C3'" . DC A 1 3 ? 23.013 21.338 18.711 1.00 28.84 ? 3 DC A "C3'" 1 ATOM 47 O "O3'" . DC A 1 3 ? 23.814 20.170 18.542 1.00 36.26 ? 3 DC A "O3'" 1 ATOM 48 C "C2'" . DC A 1 3 ? 21.549 21.008 18.703 1.00 31.67 ? 3 DC A "C2'" 1 ATOM 49 C "C1'" . DC A 1 3 ? 20.942 21.829 19.823 1.00 26.53 ? 3 DC A "C1'" 1 ATOM 50 N N1 . DC A 1 3 ? 19.962 22.827 19.385 1.00 27.28 ? 3 DC A N1 1 ATOM 51 C C2 . DC A 1 3 ? 18.613 22.622 19.681 1.00 24.64 ? 3 DC A C2 1 ATOM 52 O O2 . DC A 1 3 ? 18.296 21.594 20.309 1.00 31.48 ? 3 DC A O2 1 ATOM 53 N N3 . DC A 1 3 ? 17.695 23.536 19.282 1.00 21.37 ? 3 DC A N3 1 ATOM 54 C C4 . DC A 1 3 ? 18.105 24.616 18.610 1.00 25.93 ? 3 DC A C4 1 ATOM 55 N N4 . DC A 1 3 ? 17.189 25.512 18.223 1.00 26.47 ? 3 DC A N4 1 ATOM 56 C C5 . DC A 1 3 ? 19.475 24.842 18.298 1.00 30.50 ? 3 DC A C5 1 ATOM 57 C C6 . DC A 1 3 ? 20.376 23.934 18.696 1.00 29.51 ? 3 DC A C6 1 ATOM 58 P P . DG A 1 4 ? 23.825 19.432 17.109 1.00 31.21 ? 4 DG A P 1 ATOM 59 O OP1 . DG A 1 4 ? 25.180 18.845 16.948 1.00 42.05 ? 4 DG A OP1 1 ATOM 60 O OP2 . DG A 1 4 ? 23.305 20.385 16.100 1.00 39.72 ? 4 DG A OP2 1 ATOM 61 O "O5'" . DG A 1 4 ? 22.771 18.267 17.274 1.00 30.92 ? 4 DG A "O5'" 1 ATOM 62 C "C5'" . DG A 1 4 ? 22.542 17.611 18.529 1.00 27.68 ? 4 DG A "C5'" 1 ATOM 63 C "C4'" . DG A 1 4 ? 21.302 16.767 18.381 1.00 22.47 ? 4 DG A "C4'" 1 ATOM 64 O "O4'" . DG A 1 4 ? 20.147 17.632 18.397 1.00 29.79 ? 4 DG A "O4'" 1 ATOM 65 C "C3'" . DG A 1 4 ? 21.225 15.976 17.084 1.00 32.19 ? 4 DG A "C3'" 1 ATOM 66 O "O3'" . DG A 1 4 ? 20.649 14.696 17.315 1.00 46.06 ? 4 DG A "O3'" 1 ATOM 67 C "C2'" . DG A 1 4 ? 20.373 16.830 16.184 1.00 34.21 ? 4 DG A "C2'" 1 ATOM 68 C "C1'" . DG A 1 4 ? 19.454 17.541 17.164 1.00 30.75 ? 4 DG A "C1'" 1 ATOM 69 N N9 . DG A 1 4 ? 19.106 18.906 16.742 1.00 24.14 ? 4 DG A N9 1 ATOM 70 C C8 . DG A 1 4 ? 19.899 19.832 16.104 1.00 24.45 ? 4 DG A C8 1 ATOM 71 N N7 . DG A 1 4 ? 19.282 20.959 15.867 1.00 25.08 ? 4 DG A N7 1 ATOM 72 C C5 . DG A 1 4 ? 18.004 20.764 16.380 1.00 26.69 ? 4 DG A C5 1 ATOM 73 C C6 . DG A 1 4 ? 16.878 21.625 16.422 1.00 24.87 ? 4 DG A C6 1 ATOM 74 O O6 . DG A 1 4 ? 16.783 22.786 15.994 1.00 36.31 ? 4 DG A O6 1 ATOM 75 N N1 . DG A 1 4 ? 15.791 21.013 17.036 1.00 21.26 ? 4 DG A N1 1 ATOM 76 C C2 . DG A 1 4 ? 15.786 19.736 17.544 1.00 20.61 ? 4 DG A C2 1 ATOM 77 N N2 . DG A 1 4 ? 14.665 19.289 18.103 1.00 18.74 ? 4 DG A N2 1 ATOM 78 N N3 . DG A 1 4 ? 16.823 18.923 17.513 1.00 22.35 ? 4 DG A N3 1 ATOM 79 C C4 . DG A 1 4 ? 17.884 19.503 16.921 1.00 22.77 ? 4 DG A C4 1 ATOM 80 P P . DA A 1 5 ? 20.449 13.550 16.205 1.00 40.38 ? 5 DA A P 1 ATOM 81 O OP1 . DA A 1 5 ? 20.652 12.246 16.893 1.00 39.74 ? 5 DA A OP1 1 ATOM 82 O OP2 . DA A 1 5 ? 21.219 13.906 15.002 1.00 31.81 ? 5 DA A OP2 1 ATOM 83 O "O5'" . DA A 1 5 ? 18.882 13.681 15.885 1.00 33.55 ? 5 DA A "O5'" 1 ATOM 84 C "C5'" . DA A 1 5 ? 17.954 13.477 16.955 1.00 31.26 ? 5 DA A "C5'" 1 ATOM 85 C "C4'" . DA A 1 5 ? 16.561 13.928 16.600 1.00 34.88 ? 5 DA A "C4'" 1 ATOM 86 O "O4'" . DA A 1 5 ? 16.545 15.336 16.255 1.00 26.90 ? 5 DA A "O4'" 1 ATOM 87 C "C3'" . DA A 1 5 ? 15.952 13.205 15.400 1.00 45.62 ? 5 DA A "C3'" 1 ATOM 88 O "O3'" . DA A 1 5 ? 14.664 12.695 15.757 1.00 46.56 ? 5 DA A "O3'" 1 ATOM 89 C "C2'" . DA A 1 5 ? 15.900 14.238 14.306 1.00 40.48 ? 5 DA A "C2'" 1 ATOM 90 C "C1'" . DA A 1 5 ? 15.761 15.533 15.073 1.00 31.03 ? 5 DA A "C1'" 1 ATOM 91 N N9 . DA A 1 5 ? 16.316 16.756 14.495 1.00 30.56 ? 5 DA A N9 1 ATOM 92 C C8 . DA A 1 5 ? 17.573 16.939 13.983 1.00 31.37 ? 5 DA A C8 1 ATOM 93 N N7 . DA A 1 5 ? 17.795 18.149 13.533 1.00 38.00 ? 5 DA A N7 1 ATOM 94 C C5 . DA A 1 5 ? 16.598 18.811 13.766 1.00 36.15 ? 5 DA A C5 1 ATOM 95 C C6 . DA A 1 5 ? 16.195 20.135 13.508 1.00 24.60 ? 5 DA A C6 1 ATOM 96 N N6 . DA A 1 5 ? 16.977 21.057 12.941 1.00 19.54 ? 5 DA A N6 1 ATOM 97 N N1 . DA A 1 5 ? 14.939 20.464 13.863 1.00 31.59 ? 5 DA A N1 1 ATOM 98 C C2 . DA A 1 5 ? 14.156 19.537 14.432 1.00 34.68 ? 5 DA A C2 1 ATOM 99 N N3 . DA A 1 5 ? 14.420 18.265 14.724 1.00 34.30 ? 5 DA A N3 1 ATOM 100 C C4 . DA A 1 5 ? 15.677 17.964 14.359 1.00 33.94 ? 5 DA A C4 1 ATOM 101 P P . DA A 1 6 ? 13.837 11.803 14.707 1.00 39.59 ? 6 DA A P 1 ATOM 102 O OP1 . DA A 1 6 ? 13.081 10.776 15.474 1.00 46.74 ? 6 DA A OP1 1 ATOM 103 O OP2 . DA A 1 6 ? 14.773 11.413 13.630 1.00 31.09 ? 6 DA A OP2 1 ATOM 104 O "O5'" . DA A 1 6 ? 12.773 12.826 14.109 1.00 26.45 ? 6 DA A "O5'" 1 ATOM 105 C "C5'" . DA A 1 6 ? 11.808 13.464 14.954 1.00 20.59 ? 6 DA A "C5'" 1 ATOM 106 C "C4'" . DA A 1 6 ? 11.020 14.456 14.134 1.00 27.34 ? 6 DA A "C4'" 1 ATOM 107 O "O4'" . DA A 1 6 ? 11.871 15.559 13.749 1.00 25.59 ? 6 DA A "O4'" 1 ATOM 108 C "C3'" . DA A 1 6 ? 10.442 13.854 12.855 1.00 18.21 ? 6 DA A "C3'" 1 ATOM 109 O "O3'" . DA A 1 6 ? 9.027 14.021 12.868 1.00 25.37 ? 6 DA A "O3'" 1 ATOM 110 C "C2'" . DA A 1 6 ? 11.122 14.593 11.736 1.00 20.12 ? 6 DA A "C2'" 1 ATOM 111 C "C1'" . DA A 1 6 ? 11.631 15.871 12.379 1.00 21.83 ? 6 DA A "C1'" 1 ATOM 112 N N9 . DA A 1 6 ? 12.910 16.400 11.882 1.00 20.09 ? 6 DA A N9 1 ATOM 113 C C8 . DA A 1 6 ? 14.111 15.765 11.722 1.00 20.45 ? 6 DA A C8 1 ATOM 114 N N7 . DA A 1 6 ? 15.051 16.548 11.250 1.00 25.00 ? 6 DA A N7 1 ATOM 115 C C5 . DA A 1 6 ? 14.433 17.779 11.088 1.00 28.63 ? 6 DA A C5 1 ATOM 116 C C6 . DA A 1 6 ? 14.886 19.032 10.624 1.00 27.91 ? 6 DA A C6 1 ATOM 117 N N6 . DA A 1 6 ? 16.136 19.266 10.216 1.00 16.97 ? 6 DA A N6 1 ATOM 118 N N1 . DA A 1 6 ? 13.995 20.048 10.596 1.00 22.22 ? 6 DA A N1 1 ATOM 119 C C2 . DA A 1 6 ? 12.741 19.831 11.001 1.00 19.36 ? 6 DA A C2 1 ATOM 120 N N3 . DA A 1 6 ? 12.204 18.702 11.455 1.00 21.10 ? 6 DA A N3 1 ATOM 121 C C4 . DA A 1 6 ? 13.111 17.707 11.473 1.00 25.81 ? 6 DA A C4 1 ATOM 122 P P . DT A 1 7 ? 8.050 13.595 11.690 1.00 25.83 ? 7 DT A P 1 ATOM 123 O OP1 . DT A 1 7 ? 6.743 13.202 12.275 1.00 21.41 ? 7 DT A OP1 1 ATOM 124 O OP2 . DT A 1 7 ? 8.783 12.629 10.819 1.00 21.95 ? 7 DT A OP2 1 ATOM 125 O "O5'" . DT A 1 7 ? 7.789 14.915 10.834 1.00 24.15 ? 7 DT A "O5'" 1 ATOM 126 C "C5'" . DT A 1 7 ? 7.662 16.183 11.481 1.00 25.77 ? 7 DT A "C5'" 1 ATOM 127 C "C4'" . DT A 1 7 ? 7.865 17.297 10.475 1.00 23.36 ? 7 DT A "C4'" 1 ATOM 128 O "O4'" . DT A 1 7 ? 9.256 17.526 10.185 1.00 23.43 ? 7 DT A "O4'" 1 ATOM 129 C "C3'" . DT A 1 7 ? 7.221 17.018 9.112 1.00 20.39 ? 7 DT A "C3'" 1 ATOM 130 O "O3'" . DT A 1 7 ? 6.047 17.822 9.043 1.00 29.00 ? 7 DT A "O3'" 1 ATOM 131 C "C2'" . DT A 1 7 ? 8.260 17.348 8.082 1.00 23.66 ? 7 DT A "C2'" 1 ATOM 132 C "C1'" . DT A 1 7 ? 9.344 18.063 8.861 1.00 23.42 ? 7 DT A "C1'" 1 ATOM 133 N N1 . DT A 1 7 ? 10.742 17.837 8.492 1.00 25.52 ? 7 DT A N1 1 ATOM 134 C C2 . DT A 1 7 ? 11.480 18.931 8.091 1.00 26.63 ? 7 DT A C2 1 ATOM 135 O O2 . DT A 1 7 ? 11.000 20.053 8.038 1.00 33.97 ? 7 DT A O2 1 ATOM 136 N N3 . DT A 1 7 ? 12.780 18.654 7.762 1.00 21.23 ? 7 DT A N3 1 ATOM 137 C C4 . DT A 1 7 ? 13.406 17.428 7.791 1.00 15.95 ? 7 DT A C4 1 ATOM 138 O O4 . DT A 1 7 ? 14.580 17.295 7.474 1.00 26.01 ? 7 DT A O4 1 ATOM 139 C C5 . DT A 1 7 ? 12.574 16.322 8.223 1.00 21.47 ? 7 DT A C5 1 ATOM 140 C C7 . DT A 1 7 ? 13.227 14.975 8.265 1.00 17.46 ? 7 DT A C7 1 ATOM 141 C C6 . DT A 1 7 ? 11.308 16.580 8.547 1.00 23.96 ? 7 DT A C6 1 ATOM 142 P P . DT A 1 8 ? 5.068 17.837 7.782 1.00 34.01 ? 8 DT A P 1 ATOM 143 O OP1 . DT A 1 8 ? 3.788 18.418 8.268 1.00 32.10 ? 8 DT A OP1 1 ATOM 144 O OP2 . DT A 1 8 ? 5.125 16.499 7.135 1.00 30.56 ? 8 DT A OP2 1 ATOM 145 O "O5'" . DT A 1 8 ? 5.749 18.885 6.786 1.00 33.25 ? 8 DT A "O5'" 1 ATOM 146 C "C5'" . DT A 1 8 ? 5.578 20.290 6.989 1.00 26.35 ? 8 DT A "C5'" 1 ATOM 147 C "C4'" . DT A 1 8 ? 6.470 21.080 6.069 1.00 26.40 ? 8 DT A "C4'" 1 ATOM 148 O "O4'" . DT A 1 8 ? 7.819 20.569 6.121 1.00 26.90 ? 8 DT A "O4'" 1 ATOM 149 C "C3'" . DT A 1 8 ? 6.067 21.014 4.601 1.00 31.88 ? 8 DT A "C3'" 1 ATOM 150 O "O3'" . DT A 1 8 ? 5.568 22.288 4.191 1.00 40.09 ? 8 DT A "O3'" 1 ATOM 151 C "C2'" . DT A 1 8 ? 7.301 20.635 3.836 1.00 22.86 ? 8 DT A "C2'" 1 ATOM 152 C "C1'" . DT A 1 8 ? 8.424 20.786 4.846 1.00 24.10 ? 8 DT A "C1'" 1 ATOM 153 N N1 . DT A 1 8 ? 9.523 19.818 4.764 1.00 18.94 ? 8 DT A N1 1 ATOM 154 C C2 . DT A 1 8 ? 10.791 20.292 4.551 1.00 18.76 ? 8 DT A C2 1 ATOM 155 O O2 . DT A 1 8 ? 11.047 21.482 4.428 1.00 33.96 ? 8 DT A O2 1 ATOM 156 N N3 . DT A 1 8 ? 11.769 19.334 4.485 1.00 22.46 ? 8 DT A N3 1 ATOM 157 C C4 . DT A 1 8 ? 11.597 17.966 4.610 1.00 23.79 ? 8 DT A C4 1 ATOM 158 O O4 . DT A 1 8 ? 12.571 17.222 4.528 1.00 26.64 ? 8 DT A O4 1 ATOM 159 C C5 . DT A 1 8 ? 10.238 17.536 4.830 1.00 22.19 ? 8 DT A C5 1 ATOM 160 C C7 . DT A 1 8 ? 9.972 16.070 4.976 1.00 29.53 ? 8 DT A C7 1 ATOM 161 C C6 . DT A 1 8 ? 9.273 18.464 4.897 1.00 24.08 ? 8 DT A C6 1 ATOM 162 P P . DC A 1 9 ? 4.952 22.471 2.719 1.00 38.83 ? 9 DC A P 1 ATOM 163 O OP1 . DC A 1 9 ? 3.648 23.151 2.871 1.00 38.00 ? 9 DC A OP1 1 ATOM 164 O OP2 . DC A 1 9 ? 5.049 21.175 2.003 1.00 32.63 ? 9 DC A OP2 1 ATOM 165 O "O5'" . DC A 1 9 ? 5.979 23.482 2.027 1.00 48.94 ? 9 DC A "O5'" 1 ATOM 166 C "C5'" . DC A 1 9 ? 7.114 23.976 2.747 1.00 36.15 ? 9 DC A "C5'" 1 ATOM 167 C "C4'" . DC A 1 9 ? 8.190 24.466 1.809 1.00 42.41 ? 9 DC A "C4'" 1 ATOM 168 O "O4'" . DC A 1 9 ? 9.304 23.542 1.844 1.00 43.06 ? 9 DC A "O4'" 1 ATOM 169 C "C3'" . DC A 1 9 ? 7.796 24.576 0.338 1.00 41.52 ? 9 DC A "C3'" 1 ATOM 170 O "O3'" . DC A 1 9 ? 8.249 25.825 -0.175 1.00 50.85 ? 9 DC A "O3'" 1 ATOM 171 C "C2'" . DC A 1 9 ? 8.443 23.400 -0.338 1.00 39.05 ? 9 DC A "C2'" 1 ATOM 172 C "C1'" . DC A 1 9 ? 9.650 23.110 0.534 1.00 38.01 ? 9 DC A "C1'" 1 ATOM 173 N N1 . DC A 1 9 ? 10.028 21.695 0.678 1.00 33.75 ? 9 DC A N1 1 ATOM 174 C C2 . DC A 1 9 ? 11.382 21.364 0.678 1.00 38.42 ? 9 DC A C2 1 ATOM 175 O O2 . DC A 1 9 ? 12.237 22.259 0.558 1.00 35.00 ? 9 DC A O2 1 ATOM 176 N N3 . DC A 1 9 ? 11.739 20.063 0.813 1.00 37.82 ? 9 DC A N3 1 ATOM 177 C C4 . DC A 1 9 ? 10.806 19.114 0.940 1.00 32.56 ? 9 DC A C4 1 ATOM 178 N N4 . DC A 1 9 ? 11.225 17.854 1.067 1.00 29.40 ? 9 DC A N4 1 ATOM 179 C C5 . DC A 1 9 ? 9.419 19.425 0.944 1.00 29.96 ? 9 DC A C5 1 ATOM 180 C C6 . DC A 1 9 ? 9.087 20.716 0.813 1.00 32.09 ? 9 DC A C6 1 ATOM 181 P P . DG A 1 10 ? 7.670 26.518 -1.498 1.00 46.59 ? 10 DG A P 1 ATOM 182 O OP1 . DG A 1 10 ? 7.664 27.987 -1.263 1.00 49.59 ? 10 DG A OP1 1 ATOM 183 O OP2 . DG A 1 10 ? 6.429 25.829 -1.907 1.00 38.95 ? 10 DG A OP2 1 ATOM 184 O "O5'" . DG A 1 10 ? 8.795 26.208 -2.593 1.00 47.35 ? 10 DG A "O5'" 1 ATOM 185 C "C5'" . DG A 1 10 ? 10.169 26.533 -2.328 1.00 44.48 ? 10 DG A "C5'" 1 ATOM 186 C "C4'" . DG A 1 10 ? 11.050 25.807 -3.317 1.00 45.41 ? 10 DG A "C4'" 1 ATOM 187 O "O4'" . DG A 1 10 ? 11.222 24.426 -2.887 1.00 30.02 ? 10 DG A "O4'" 1 ATOM 188 C "C3'" . DG A 1 10 ? 10.509 25.724 -4.729 1.00 46.53 ? 10 DG A "C3'" 1 ATOM 189 O "O3'" . DG A 1 10 ? 11.537 25.726 -5.714 1.00 43.94 ? 10 DG A "O3'" 1 ATOM 190 C "C2'" . DG A 1 10 ? 9.774 24.405 -4.717 1.00 44.43 ? 10 DG A "C2'" 1 ATOM 191 C "C1'" . DG A 1 10 ? 10.845 23.595 -3.979 1.00 31.17 ? 10 DG A "C1'" 1 ATOM 192 N N9 . DG A 1 10 ? 10.379 22.295 -3.495 1.00 30.81 ? 10 DG A N9 1 ATOM 193 C C8 . DG A 1 10 ? 9.110 21.851 -3.237 1.00 27.29 ? 10 DG A C8 1 ATOM 194 N N7 . DG A 1 10 ? 9.076 20.617 -2.811 1.00 31.72 ? 10 DG A N7 1 ATOM 195 C C5 . DG A 1 10 ? 10.404 20.219 -2.786 1.00 27.72 ? 10 DG A C5 1 ATOM 196 C C6 . DG A 1 10 ? 11.003 18.984 -2.413 1.00 26.26 ? 10 DG A C6 1 ATOM 197 O O6 . DG A 1 10 ? 10.446 17.953 -2.013 1.00 25.68 ? 10 DG A O6 1 ATOM 198 N N1 . DG A 1 10 ? 12.380 19.038 -2.547 1.00 24.10 ? 10 DG A N1 1 ATOM 199 C C2 . DG A 1 10 ? 13.104 20.119 -2.978 1.00 27.71 ? 10 DG A C2 1 ATOM 200 N N2 . DG A 1 10 ? 14.430 19.979 -3.041 1.00 18.97 ? 10 DG A N2 1 ATOM 201 N N3 . DG A 1 10 ? 12.568 21.276 -3.329 1.00 30.49 ? 10 DG A N3 1 ATOM 202 C C4 . DG A 1 10 ? 11.222 21.238 -3.203 1.00 33.40 ? 10 DG A C4 1 ATOM 203 P P . DC A 1 11 ? 12.081 27.148 -6.259 1.00 46.74 ? 11 DC A P 1 ATOM 204 O OP1 . DC A 1 11 ? 12.215 28.057 -5.088 1.00 41.63 ? 11 DC A OP1 1 ATOM 205 O OP2 . DC A 1 11 ? 11.229 27.521 -7.403 1.00 36.85 ? 11 DC A OP2 1 ATOM 206 O "O5'" . DC A 1 11 ? 13.562 26.813 -6.754 1.00 44.83 ? 11 DC A "O5'" 1 ATOM 207 C "C5'" . DC A 1 11 ? 14.610 27.032 -5.798 1.00 45.41 ? 11 DC A "C5'" 1 ATOM 208 C "C4'" . DC A 1 11 ? 15.625 25.921 -5.807 1.00 35.96 ? 11 DC A "C4'" 1 ATOM 209 O "O4'" . DC A 1 11 ? 15.021 24.631 -5.539 1.00 38.14 ? 11 DC A "O4'" 1 ATOM 210 C "C3'" . DC A 1 11 ? 16.334 25.736 -7.147 1.00 24.17 ? 11 DC A "C3'" 1 ATOM 211 O "O3'" . DC A 1 11 ? 17.712 25.482 -6.903 1.00 34.14 ? 11 DC A "O3'" 1 ATOM 212 C "C2'" . DC A 1 11 ? 15.617 24.584 -7.798 1.00 31.08 ? 11 DC A "C2'" 1 ATOM 213 C "C1'" . DC A 1 11 ? 15.323 23.706 -6.594 1.00 38.57 ? 11 DC A "C1'" 1 ATOM 214 N N1 . DC A 1 11 ? 14.166 22.807 -6.651 1.00 28.44 ? 11 DC A N1 1 ATOM 215 C C2 . DC A 1 11 ? 14.366 21.455 -6.366 1.00 29.04 ? 11 DC A C2 1 ATOM 216 O O2 . DC A 1 11 ? 15.512 21.075 -6.082 1.00 40.68 ? 11 DC A O2 1 ATOM 217 N N3 . DC A 1 11 ? 13.317 20.609 -6.409 1.00 32.08 ? 11 DC A N3 1 ATOM 218 C C4 . DC A 1 11 ? 12.101 21.056 -6.717 1.00 35.31 ? 11 DC A C4 1 ATOM 219 N N4 . DC A 1 11 ? 11.107 20.170 -6.742 1.00 32.28 ? 11 DC A N4 1 ATOM 220 C C5 . DC A 1 11 ? 11.870 22.430 -7.009 1.00 35.05 ? 11 DC A C5 1 ATOM 221 C C6 . DC A 1 11 ? 12.919 23.260 -6.963 1.00 27.02 ? 11 DC A C6 1 ATOM 222 P P . DG A 1 12 ? 18.870 25.867 -7.931 1.00 41.05 ? 12 DG A P 1 ATOM 223 O OP1 . DG A 1 12 ? 20.141 25.957 -7.168 1.00 50.01 ? 12 DG A OP1 1 ATOM 224 O OP2 . DG A 1 12 ? 18.397 27.009 -8.756 1.00 57.70 ? 12 DG A OP2 1 ATOM 225 O "O5'" . DG A 1 12 ? 18.950 24.587 -8.884 1.00 43.16 ? 12 DG A "O5'" 1 ATOM 226 C "C5'" . DG A 1 12 ? 19.526 23.358 -8.422 1.00 36.58 ? 12 DG A "C5'" 1 ATOM 227 C "C4'" . DG A 1 12 ? 19.136 22.245 -9.365 1.00 28.62 ? 12 DG A "C4'" 1 ATOM 228 O "O4'" . DG A 1 12 ? 17.786 21.816 -9.111 1.00 23.38 ? 12 DG A "O4'" 1 ATOM 229 C "C3'" . DG A 1 12 ? 19.150 22.637 -10.837 1.00 26.92 ? 12 DG A "C3'" 1 ATOM 230 O "O3'" . DG A 1 12 ? 20.389 22.251 -11.440 1.00 26.61 ? 12 DG A "O3'" 1 ATOM 231 C "C2'" . DG A 1 12 ? 17.979 21.923 -11.456 1.00 30.65 ? 12 DG A "C2'" 1 ATOM 232 C "C1'" . DG A 1 12 ? 17.340 21.173 -10.310 1.00 31.61 ? 12 DG A "C1'" 1 ATOM 233 N N9 . DG A 1 12 ? 15.875 21.214 -10.248 1.00 28.13 ? 12 DG A N9 1 ATOM 234 C C8 . DG A 1 12 ? 15.045 22.281 -10.500 1.00 23.13 ? 12 DG A C8 1 ATOM 235 N N7 . DG A 1 12 ? 13.784 21.985 -10.356 1.00 28.46 ? 12 DG A N7 1 ATOM 236 C C5 . DG A 1 12 ? 13.779 20.645 -9.987 1.00 31.60 ? 12 DG A C5 1 ATOM 237 C C6 . DG A 1 12 ? 12.698 19.774 -9.694 1.00 19.10 ? 12 DG A C6 1 ATOM 238 O O6 . DG A 1 12 ? 11.493 20.043 -9.708 1.00 27.49 ? 12 DG A O6 1 ATOM 239 N N1 . DG A 1 12 ? 13.150 18.502 -9.366 1.00 21.71 ? 12 DG A N1 1 ATOM 240 C C2 . DG A 1 12 ? 14.467 18.118 -9.327 1.00 19.96 ? 12 DG A C2 1 ATOM 241 N N2 . DG A 1 12 ? 14.737 16.848 -8.992 1.00 26.55 ? 12 DG A N2 1 ATOM 242 N N3 . DG A 1 12 ? 15.483 18.918 -9.598 1.00 22.79 ? 12 DG A N3 1 ATOM 243 C C4 . DG A 1 12 ? 15.064 20.156 -9.917 1.00 29.27 ? 12 DG A C4 1 ATOM 244 O "O5'" . DC B 1 1 ? 7.877 10.655 -9.205 1.00 46.36 ? 13 DC B "O5'" 1 ATOM 245 C "C5'" . DC B 1 1 ? 9.174 10.069 -9.206 1.00 41.01 ? 13 DC B "C5'" 1 ATOM 246 C "C4'" . DC B 1 1 ? 10.142 10.970 -8.483 1.00 37.34 ? 13 DC B "C4'" 1 ATOM 247 O "O4'" . DC B 1 1 ? 10.296 12.214 -9.208 1.00 36.74 ? 13 DC B "O4'" 1 ATOM 248 C "C3'" . DC B 1 1 ? 9.702 11.360 -7.079 1.00 40.02 ? 13 DC B "C3'" 1 ATOM 249 O "O3'" . DC B 1 1 ? 10.751 11.103 -6.149 1.00 42.35 ? 13 DC B "O3'" 1 ATOM 250 C "C2'" . DC B 1 1 ? 9.366 12.829 -7.172 1.00 31.98 ? 13 DC B "C2'" 1 ATOM 251 C "C1'" . DC B 1 1 ? 10.351 13.269 -8.242 1.00 34.27 ? 13 DC B "C1'" 1 ATOM 252 N N1 . DC B 1 1 ? 10.056 14.504 -8.965 1.00 28.46 ? 13 DC B N1 1 ATOM 253 C C2 . DC B 1 1 ? 11.051 15.484 -9.021 1.00 30.17 ? 13 DC B C2 1 ATOM 254 O O2 . DC B 1 1 ? 12.134 15.268 -8.460 1.00 27.02 ? 13 DC B O2 1 ATOM 255 N N3 . DC B 1 1 ? 10.809 16.640 -9.684 1.00 32.82 ? 13 DC B N3 1 ATOM 256 C C4 . DC B 1 1 ? 9.621 16.817 -10.274 1.00 36.55 ? 13 DC B C4 1 ATOM 257 N N4 . DC B 1 1 ? 9.416 17.969 -10.921 1.00 31.05 ? 13 DC B N4 1 ATOM 258 C C5 . DC B 1 1 ? 8.592 15.831 -10.229 1.00 41.19 ? 13 DC B C5 1 ATOM 259 C C6 . DC B 1 1 ? 8.845 14.692 -9.569 1.00 32.38 ? 13 DC B C6 1 ATOM 260 P P . DG B 1 2 ? 11.049 9.614 -5.646 1.00 36.88 ? 14 DG B P 1 ATOM 261 O OP1 . DG B 1 2 ? 10.802 8.666 -6.757 1.00 40.84 ? 14 DG B OP1 1 ATOM 262 O OP2 . DG B 1 2 ? 10.348 9.408 -4.353 1.00 51.82 ? 14 DG B OP2 1 ATOM 263 O "O5'" . DG B 1 2 ? 12.621 9.655 -5.361 1.00 29.43 ? 14 DG B "O5'" 1 ATOM 264 C "C5'" . DG B 1 2 ? 13.557 9.611 -6.446 1.00 33.61 ? 14 DG B "C5'" 1 ATOM 265 C "C4'" . DG B 1 2 ? 14.665 10.616 -6.211 1.00 24.07 ? 14 DG B "C4'" 1 ATOM 266 O "O4'" . DG B 1 2 ? 14.189 11.940 -6.512 1.00 32.75 ? 14 DG B "O4'" 1 ATOM 267 C "C3'" . DG B 1 2 ? 15.167 10.662 -4.777 1.00 26.48 ? 14 DG B "C3'" 1 ATOM 268 O "O3'" . DG B 1 2 ? 16.568 10.372 -4.743 1.00 26.49 ? 14 DG B "O3'" 1 ATOM 269 C "C2'" . DG B 1 2 ? 14.875 12.053 -4.273 1.00 40.18 ? 14 DG B "C2'" 1 ATOM 270 C "C1'" . DG B 1 2 ? 14.662 12.869 -5.526 1.00 38.68 ? 14 DG B "C1'" 1 ATOM 271 N N9 . DG B 1 2 ? 13.654 13.933 -5.439 1.00 28.47 ? 14 DG B N9 1 ATOM 272 C C8 . DG B 1 2 ? 12.310 13.736 -5.209 1.00 30.76 ? 14 DG B C8 1 ATOM 273 N N7 . DG B 1 2 ? 11.630 14.848 -5.180 1.00 30.53 ? 14 DG B N7 1 ATOM 274 C C5 . DG B 1 2 ? 12.571 15.839 -5.402 1.00 26.06 ? 14 DG B C5 1 ATOM 275 C C6 . DG B 1 2 ? 12.390 17.248 -5.473 1.00 20.96 ? 14 DG B C6 1 ATOM 276 O O6 . DG B 1 2 ? 11.341 17.886 -5.350 1.00 27.51 ? 14 DG B O6 1 ATOM 277 N N1 . DG B 1 2 ? 13.586 17.910 -5.713 1.00 21.88 ? 14 DG B N1 1 ATOM 278 C C2 . DG B 1 2 ? 14.792 17.266 -5.860 1.00 22.94 ? 14 DG B C2 1 ATOM 279 N N2 . DG B 1 2 ? 15.840 18.065 -6.086 1.00 27.20 ? 14 DG B N2 1 ATOM 280 N N3 . DG B 1 2 ? 14.975 15.958 -5.796 1.00 32.91 ? 14 DG B N3 1 ATOM 281 C C4 . DG B 1 2 ? 13.827 15.286 -5.564 1.00 27.55 ? 14 DG B C4 1 ATOM 282 P P . DC B 1 3 ? 17.240 10.148 -3.296 1.00 30.87 ? 15 DC B P 1 ATOM 283 O OP1 . DC B 1 3 ? 18.415 9.264 -3.461 1.00 35.22 ? 15 DC B OP1 1 ATOM 284 O OP2 . DC B 1 3 ? 16.128 9.810 -2.373 1.00 31.17 ? 15 DC B OP2 1 ATOM 285 O "O5'" . DC B 1 3 ? 17.778 11.593 -2.919 1.00 24.37 ? 15 DC B "O5'" 1 ATOM 286 C "C5'" . DC B 1 3 ? 18.818 12.222 -3.683 1.00 19.78 ? 15 DC B "C5'" 1 ATOM 287 C "C4'" . DC B 1 3 ? 18.722 13.703 -3.427 1.00 21.48 ? 15 DC B "C4'" 1 ATOM 288 O "O4'" . DC B 1 3 ? 17.350 14.140 -3.564 1.00 25.51 ? 15 DC B "O4'" 1 ATOM 289 C "C3'" . DC B 1 3 ? 19.111 14.132 -2.030 1.00 21.51 ? 15 DC B "C3'" 1 ATOM 290 O "O3'" . DC B 1 3 ? 20.507 14.409 -1.959 1.00 27.56 ? 15 DC B "O3'" 1 ATOM 291 C "C2'" . DC B 1 3 ? 18.286 15.366 -1.775 1.00 32.45 ? 15 DC B "C2'" 1 ATOM 292 C "C1'" . DC B 1 3 ? 17.252 15.392 -2.878 1.00 21.67 ? 15 DC B "C1'" 1 ATOM 293 N N1 . DC B 1 3 ? 15.858 15.504 -2.434 1.00 23.92 ? 15 DC B N1 1 ATOM 294 C C2 . DC B 1 3 ? 15.232 16.745 -2.573 1.00 23.64 ? 15 DC B C2 1 ATOM 295 O O2 . DC B 1 3 ? 15.873 17.688 -3.057 1.00 23.25 ? 15 DC B O2 1 ATOM 296 N N3 . DC B 1 3 ? 13.951 16.875 -2.174 1.00 27.07 ? 15 DC B N3 1 ATOM 297 C C4 . DC B 1 3 ? 13.303 15.829 -1.659 1.00 27.23 ? 15 DC B C4 1 ATOM 298 N N4 . DC B 1 3 ? 12.038 16.016 -1.282 1.00 28.65 ? 15 DC B N4 1 ATOM 299 C C5 . DC B 1 3 ? 13.923 14.558 -1.512 1.00 27.34 ? 15 DC B C5 1 ATOM 300 C C6 . DC B 1 3 ? 15.192 14.435 -1.908 1.00 24.34 ? 15 DC B C6 1 ATOM 301 P P . DG B 1 4 ? 21.197 14.665 -0.528 1.00 38.58 ? 16 DG B P 1 ATOM 302 O OP1 . DG B 1 4 ? 22.623 14.284 -0.668 1.00 55.24 ? 16 DG B OP1 1 ATOM 303 O OP2 . DG B 1 4 ? 20.327 14.075 0.513 1.00 31.28 ? 16 DG B OP2 1 ATOM 304 O "O5'" . DG B 1 4 ? 21.121 16.258 -0.374 1.00 28.26 ? 16 DG B "O5'" 1 ATOM 305 C "C5'" . DG B 1 4 ? 21.742 17.068 -1.380 1.00 27.01 ? 16 DG B "C5'" 1 ATOM 306 C "C4'" . DG B 1 4 ? 21.443 18.524 -1.105 1.00 27.98 ? 16 DG B "C4'" 1 ATOM 307 O "O4'" . DG B 1 4 ? 20.019 18.747 -1.062 1.00 30.42 ? 16 DG B "O4'" 1 ATOM 308 C "C3'" . DG B 1 4 ? 21.983 19.018 0.231 1.00 37.76 ? 16 DG B "C3'" 1 ATOM 309 O "O3'" . DG B 1 4 ? 22.508 20.335 0.081 1.00 43.38 ? 16 DG B "O3'" 1 ATOM 310 C "C2'" . DG B 1 4 ? 20.797 18.955 1.156 1.00 37.97 ? 16 DG B "C2'" 1 ATOM 311 C "C1'" . DG B 1 4 ? 19.615 19.167 0.235 1.00 34.06 ? 16 DG B "C1'" 1 ATOM 312 N N9 . DG B 1 4 ? 18.419 18.380 0.586 1.00 34.73 ? 16 DG B N9 1 ATOM 313 C C8 . DG B 1 4 ? 18.308 17.088 1.034 1.00 32.76 ? 16 DG B C8 1 ATOM 314 N N7 . DG B 1 4 ? 17.074 16.718 1.246 1.00 33.12 ? 16 DG B N7 1 ATOM 315 C C5 . DG B 1 4 ? 16.314 17.830 0.920 1.00 31.33 ? 16 DG B C5 1 ATOM 316 C C6 . DG B 1 4 ? 14.914 18.057 0.940 1.00 33.57 ? 16 DG B C6 1 ATOM 317 O O6 . DG B 1 4 ? 13.992 17.298 1.263 1.00 31.10 ? 16 DG B O6 1 ATOM 318 N N1 . DG B 1 4 ? 14.607 19.351 0.521 1.00 23.73 ? 16 DG B N1 1 ATOM 319 C C2 . DG B 1 4 ? 15.500 20.307 0.133 1.00 23.17 ? 16 DG B C2 1 ATOM 320 N N2 . DG B 1 4 ? 15.005 21.501 -0.239 1.00 29.29 ? 16 DG B N2 1 ATOM 321 N N3 . DG B 1 4 ? 16.806 20.112 0.109 1.00 35.26 ? 16 DG B N3 1 ATOM 322 C C4 . DG B 1 4 ? 17.128 18.863 0.511 1.00 35.83 ? 16 DG B C4 1 ATOM 323 P P . DA B 1 5 ? 22.793 21.280 1.346 1.00 41.73 ? 17 DA B P 1 ATOM 324 O OP1 . DA B 1 5 ? 23.792 22.301 0.925 1.00 52.96 ? 17 DA B OP1 1 ATOM 325 O OP2 . DA B 1 5 ? 23.053 20.429 2.520 1.00 37.35 ? 17 DA B OP2 1 ATOM 326 O "O5'" . DA B 1 5 ? 21.397 22.043 1.539 1.00 45.47 ? 17 DA B "O5'" 1 ATOM 327 C "C5'" . DA B 1 5 ? 20.842 22.688 0.383 1.00 36.44 ? 17 DA B "C5'" 1 ATOM 328 C "C4'" . DA B 1 5 ? 19.784 23.680 0.767 1.00 40.46 ? 17 DA B "C4'" 1 ATOM 329 O "O4'" . DA B 1 5 ? 18.551 22.978 1.060 1.00 33.76 ? 17 DA B "O4'" 1 ATOM 330 C "C3'" . DA B 1 5 ? 20.072 24.509 2.016 1.00 48.46 ? 17 DA B "C3'" 1 ATOM 331 O "O3'" . DA B 1 5 ? 19.556 25.824 1.847 1.00 53.35 ? 17 DA B "O3'" 1 ATOM 332 C "C2'" . DA B 1 5 ? 19.397 23.744 3.119 1.00 47.97 ? 17 DA B "C2'" 1 ATOM 333 C "C1'" . DA B 1 5 ? 18.192 23.127 2.424 1.00 38.97 ? 17 DA B "C1'" 1 ATOM 334 N N9 . DA B 1 5 ? 17.817 21.802 2.936 1.00 29.45 ? 17 DA B N9 1 ATOM 335 C C8 . DA B 1 5 ? 18.659 20.784 3.316 1.00 31.01 ? 17 DA B C8 1 ATOM 336 N N7 . DA B 1 5 ? 18.032 19.704 3.738 1.00 22.13 ? 17 DA B N7 1 ATOM 337 C C5 . DA B 1 5 ? 16.692 20.056 3.620 1.00 24.20 ? 17 DA B C5 1 ATOM 338 C C6 . DA B 1 5 ? 15.518 19.345 3.908 1.00 23.24 ? 17 DA B C6 1 ATOM 339 N N6 . DA B 1 5 ? 15.534 18.097 4.386 1.00 33.29 ? 17 DA B N6 1 ATOM 340 N N1 . DA B 1 5 ? 14.342 19.956 3.688 1.00 26.54 ? 17 DA B N1 1 ATOM 341 C C2 . DA B 1 5 ? 14.352 21.211 3.206 1.00 34.37 ? 17 DA B C2 1 ATOM 342 N N3 . DA B 1 5 ? 15.388 21.987 2.895 1.00 33.40 ? 17 DA B N3 1 ATOM 343 C C4 . DA B 1 5 ? 16.544 21.338 3.130 1.00 25.58 ? 17 DA B C4 1 ATOM 344 P P . DA B 1 6 ? 19.628 27.009 2.914 1.00 49.08 ? 18 DA B P 1 ATOM 345 O OP1 . DA B 1 6 ? 19.943 28.256 2.157 1.00 68.08 ? 18 DA B OP1 1 ATOM 346 O OP2 . DA B 1 6 ? 20.516 26.595 4.031 1.00 34.79 ? 18 DA B OP2 1 ATOM 347 O "O5'" . DA B 1 6 ? 18.149 27.149 3.490 1.00 30.78 ? 18 DA B "O5'" 1 ATOM 348 C "C5'" . DA B 1 6 ? 16.992 27.057 2.654 1.00 21.25 ? 18 DA B "C5'" 1 ATOM 349 C "C4'" . DA B 1 6 ? 15.748 26.975 3.502 1.00 32.90 ? 18 DA B "C4'" 1 ATOM 350 O "O4'" . DA B 1 6 ? 15.536 25.620 3.955 1.00 31.54 ? 18 DA B "O4'" 1 ATOM 351 C "C3'" . DA B 1 6 ? 15.784 27.837 4.772 1.00 35.07 ? 18 DA B "C3'" 1 ATOM 352 O "O3'" . DA B 1 6 ? 14.587 28.602 4.816 1.00 45.41 ? 18 DA B "O3'" 1 ATOM 353 C "C2'" . DA B 1 6 ? 15.940 26.858 5.907 1.00 26.64 ? 18 DA B "C2'" 1 ATOM 354 C "C1'" . DA B 1 6 ? 15.301 25.601 5.369 1.00 28.86 ? 18 DA B "C1'" 1 ATOM 355 N N9 . DA B 1 6 ? 15.849 24.303 5.797 1.00 20.41 ? 18 DA B N9 1 ATOM 356 C C8 . DA B 1 6 ? 17.151 23.924 5.958 1.00 20.41 ? 18 DA B C8 1 ATOM 357 N N7 . DA B 1 6 ? 17.298 22.682 6.355 1.00 23.33 ? 18 DA B N7 1 ATOM 358 C C5 . DA B 1 6 ? 15.997 22.228 6.455 1.00 21.67 ? 18 DA B C5 1 ATOM 359 C C6 . DA B 1 6 ? 15.461 20.984 6.829 1.00 18.42 ? 18 DA B C6 1 ATOM 360 N N6 . DA B 1 6 ? 16.234 19.965 7.176 1.00 23.02 ? 18 DA B N6 1 ATOM 361 N N1 . DA B 1 6 ? 14.126 20.861 6.826 1.00 17.31 ? 18 DA B N1 1 ATOM 362 C C2 . DA B 1 6 ? 13.351 21.895 6.475 1.00 21.80 ? 18 DA B C2 1 ATOM 363 N N3 . DA B 1 6 ? 13.741 23.113 6.103 1.00 26.20 ? 18 DA B N3 1 ATOM 364 C C4 . DA B 1 6 ? 15.088 23.202 6.118 1.00 21.02 ? 18 DA B C4 1 ATOM 365 P P . DT B 1 7 ? 14.121 29.566 5.995 1.00 48.14 ? 19 DT B P 1 ATOM 366 O OP1 . DT B 1 7 ? 13.331 30.675 5.390 1.00 43.75 ? 19 DT B OP1 1 ATOM 367 O OP2 . DT B 1 7 ? 15.297 29.857 6.845 1.00 40.16 ? 19 DT B OP2 1 ATOM 368 O "O5'" . DT B 1 7 ? 13.095 28.672 6.829 1.00 43.20 ? 19 DT B "O5'" 1 ATOM 369 C "C5'" . DT B 1 7 ? 12.172 27.812 6.149 1.00 38.33 ? 19 DT B "C5'" 1 ATOM 370 C "C4'" . DT B 1 7 ? 11.443 26.951 7.154 1.00 32.73 ? 19 DT B "C4'" 1 ATOM 371 O "O4'" . DT B 1 7 ? 12.205 25.775 7.482 1.00 32.62 ? 19 DT B "O4'" 1 ATOM 372 C "C3'" . DT B 1 7 ? 11.186 27.654 8.483 1.00 35.10 ? 19 DT B "C3'" 1 ATOM 373 O "O3'" . DT B 1 7 ? 9.776 27.783 8.658 1.00 36.95 ? 19 DT B "O3'" 1 ATOM 374 C "C2'" . DT B 1 7 ? 11.833 26.805 9.550 1.00 35.77 ? 19 DT B "C2'" 1 ATOM 375 C "C1'" . DT B 1 7 ? 12.003 25.465 8.878 1.00 28.67 ? 19 DT B "C1'" 1 ATOM 376 N N1 . DT B 1 7 ? 13.174 24.636 9.162 1.00 23.20 ? 19 DT B N1 1 ATOM 377 C C2 . DT B 1 7 ? 12.971 23.318 9.505 1.00 14.39 ? 19 DT B C2 1 ATOM 378 O O2 . DT B 1 7 ? 11.864 22.812 9.588 1.00 18.71 ? 19 DT B O2 1 ATOM 379 N N3 . DT B 1 7 ? 14.121 22.620 9.747 1.00 20.78 ? 19 DT B N3 1 ATOM 380 C C4 . DT B 1 7 ? 15.426 23.074 9.688 1.00 24.28 ? 19 DT B C4 1 ATOM 381 O O4 . DT B 1 7 ? 16.342 22.297 9.943 1.00 23.08 ? 19 DT B O4 1 ATOM 382 C C5 . DT B 1 7 ? 15.565 24.461 9.320 1.00 18.61 ? 19 DT B C5 1 ATOM 383 C C7 . DT B 1 7 ? 16.925 25.072 9.222 1.00 15.63 ? 19 DT B C7 1 ATOM 384 C C6 . DT B 1 7 ? 14.445 25.156 9.079 1.00 24.46 ? 19 DT B C6 1 ATOM 385 P P . DT B 1 8 ? 9.161 28.421 9.992 1.00 41.52 ? 20 DT B P 1 ATOM 386 O OP1 . DT B 1 8 ? 7.740 28.728 9.698 1.00 33.07 ? 20 DT B OP1 1 ATOM 387 O OP2 . DT B 1 8 ? 10.086 29.465 10.494 1.00 43.45 ? 20 DT B OP2 1 ATOM 388 O "O5'" . DT B 1 8 ? 9.199 27.198 11.028 1.00 35.02 ? 20 DT B "O5'" 1 ATOM 389 C "C5'" . DT B 1 8 ? 8.240 26.151 10.814 1.00 35.13 ? 20 DT B "C5'" 1 ATOM 390 C "C4'" . DT B 1 8 ? 8.502 25.017 11.767 1.00 31.05 ? 20 DT B "C4'" 1 ATOM 391 O "O4'" . DT B 1 8 ? 9.868 24.581 11.678 1.00 27.40 ? 20 DT B "O4'" 1 ATOM 392 C "C3'" . DT B 1 8 ? 8.302 25.390 13.231 1.00 23.52 ? 20 DT B "C3'" 1 ATOM 393 O "O3'" . DT B 1 8 ? 7.080 24.821 13.690 1.00 31.61 ? 20 DT B "O3'" 1 ATOM 394 C "C2'" . DT B 1 8 ? 9.491 24.840 13.959 1.00 24.81 ? 20 DT B "C2'" 1 ATOM 395 C "C1'" . DT B 1 8 ? 10.215 23.996 12.945 1.00 19.80 ? 20 DT B "C1'" 1 ATOM 396 N N1 . DT B 1 8 ? 11.680 23.997 12.954 1.00 23.40 ? 20 DT B N1 1 ATOM 397 C C2 . DT B 1 8 ? 12.311 22.794 13.203 1.00 24.46 ? 20 DT B C2 1 ATOM 398 O O2 . DT B 1 8 ? 11.663 21.780 13.409 1.00 22.88 ? 20 DT B O2 1 ATOM 399 N N3 . DT B 1 8 ? 13.678 22.864 13.195 1.00 21.93 ? 20 DT B N3 1 ATOM 400 C C4 . DT B 1 8 ? 14.475 23.967 12.973 1.00 30.11 ? 20 DT B C4 1 ATOM 401 O O4 . DT B 1 8 ? 15.702 23.872 12.999 1.00 34.53 ? 20 DT B O4 1 ATOM 402 C C5 . DT B 1 8 ? 13.751 25.192 12.717 1.00 31.41 ? 20 DT B C5 1 ATOM 403 C C7 . DT B 1 8 ? 14.525 26.447 12.462 1.00 27.80 ? 20 DT B C7 1 ATOM 404 C C6 . DT B 1 8 ? 12.412 25.140 12.721 1.00 31.06 ? 20 DT B C6 1 ATOM 405 P P . DC B 1 9 ? 6.467 25.292 15.100 1.00 36.65 ? 21 DC B P 1 ATOM 406 O OP1 . DC B 1 9 ? 4.999 25.249 14.981 1.00 37.41 ? 21 DC B OP1 1 ATOM 407 O OP2 . DC B 1 9 ? 7.182 26.500 15.552 1.00 37.50 ? 21 DC B OP2 1 ATOM 408 O "O5'" . DC B 1 9 ? 6.930 24.076 16.042 1.00 33.66 ? 21 DC B "O5'" 1 ATOM 409 C "C5'" . DC B 1 9 ? 6.771 22.745 15.530 1.00 30.41 ? 21 DC B "C5'" 1 ATOM 410 C "C4'" . DC B 1 9 ? 7.558 21.777 16.390 1.00 30.39 ? 21 DC B "C4'" 1 ATOM 411 O "O4'" . DC B 1 9 ? 8.961 21.972 16.146 1.00 27.85 ? 21 DC B "O4'" 1 ATOM 412 C "C3'" . DC B 1 9 ? 7.370 21.939 17.894 1.00 25.10 ? 21 DC B "C3'" 1 ATOM 413 O "O3'" . DC B 1 9 ? 6.890 20.704 18.428 1.00 30.64 ? 21 DC B "O3'" 1 ATOM 414 C "C2'" . DC B 1 9 ? 8.722 22.338 18.431 1.00 25.43 ? 21 DC B "C2'" 1 ATOM 415 C "C1'" . DC B 1 9 ? 9.687 21.851 17.381 1.00 25.88 ? 21 DC B "C1'" 1 ATOM 416 N N1 . DC B 1 9 ? 10.901 22.606 17.063 1.00 24.94 ? 21 DC B N1 1 ATOM 417 C C2 . DC B 1 9 ? 12.110 21.899 17.018 1.00 28.36 ? 21 DC B C2 1 ATOM 418 O O2 . DC B 1 9 ? 12.054 20.686 17.258 1.00 26.89 ? 21 DC B O2 1 ATOM 419 N N3 . DC B 1 9 ? 13.255 22.556 16.725 1.00 29.94 ? 21 DC B N3 1 ATOM 420 C C4 . DC B 1 9 ? 13.210 23.873 16.479 1.00 28.48 ? 21 DC B C4 1 ATOM 421 N N4 . DC B 1 9 ? 14.354 24.493 16.194 1.00 24.34 ? 21 DC B N4 1 ATOM 422 C C5 . DC B 1 9 ? 11.994 24.621 16.513 1.00 21.99 ? 21 DC B C5 1 ATOM 423 C C6 . DC B 1 9 ? 10.877 23.946 16.807 1.00 25.08 ? 21 DC B C6 1 ATOM 424 P P . DG B 1 10 ? 6.103 20.653 19.819 1.00 33.84 ? 22 DG B P 1 ATOM 425 O OP1 . DG B 1 10 ? 5.094 19.574 19.728 1.00 26.44 ? 22 DG B OP1 1 ATOM 426 O OP2 . DG B 1 10 ? 5.642 22.040 20.137 1.00 44.71 ? 22 DG B OP2 1 ATOM 427 O "O5'" . DG B 1 10 ? 7.208 20.267 20.894 1.00 34.42 ? 22 DG B "O5'" 1 ATOM 428 C "C5'" . DG B 1 10 ? 8.086 19.151 20.743 1.00 35.13 ? 22 DG B "C5'" 1 ATOM 429 C "C4'" . DG B 1 10 ? 9.307 19.288 21.620 1.00 32.30 ? 22 DG B "C4'" 1 ATOM 430 O "O4'" . DG B 1 10 ? 10.254 20.210 21.006 1.00 34.60 ? 22 DG B "O4'" 1 ATOM 431 C "C3'" . DG B 1 10 ? 9.077 19.856 23.008 1.00 31.62 ? 22 DG B "C3'" 1 ATOM 432 O "O3'" . DG B 1 10 ? 9.858 19.162 23.969 1.00 25.91 ? 22 DG B "O3'" 1 ATOM 433 C "C2'" . DG B 1 10 ? 9.491 21.307 22.886 1.00 31.34 ? 22 DG B "C2'" 1 ATOM 434 C "C1'" . DG B 1 10 ? 10.730 21.105 22.023 1.00 30.13 ? 22 DG B "C1'" 1 ATOM 435 N N9 . DG B 1 10 ? 11.307 22.256 21.324 1.00 28.68 ? 22 DG B N9 1 ATOM 436 C C8 . DG B 1 10 ? 10.734 23.436 20.910 1.00 20.16 ? 22 DG B C8 1 ATOM 437 N N7 . DG B 1 10 ? 11.580 24.232 20.310 1.00 21.23 ? 22 DG B N7 1 ATOM 438 C C5 . DG B 1 10 ? 12.782 23.547 20.325 1.00 22.05 ? 22 DG B C5 1 ATOM 439 C C6 . DG B 1 10 ? 14.060 23.887 19.830 1.00 25.30 ? 22 DG B C6 1 ATOM 440 O O6 . DG B 1 10 ? 14.389 24.927 19.249 1.00 29.32 ? 22 DG B O6 1 ATOM 441 N N1 . DG B 1 10 ? 15.003 22.883 20.066 1.00 19.54 ? 22 DG B N1 1 ATOM 442 C C2 . DG B 1 10 ? 14.742 21.696 20.700 1.00 17.03 ? 22 DG B C2 1 ATOM 443 N N2 . DG B 1 10 ? 15.769 20.847 20.839 1.00 25.57 ? 22 DG B N2 1 ATOM 444 N N3 . DG B 1 10 ? 13.552 21.368 21.165 1.00 23.70 ? 22 DG B N3 1 ATOM 445 C C4 . DG B 1 10 ? 12.636 22.325 20.946 1.00 21.15 ? 22 DG B C4 1 ATOM 446 P P . DC B 1 11 ? 9.199 18.366 25.195 1.00 32.70 ? 23 DC B P 1 ATOM 447 O OP1 . DC B 1 11 ? 8.286 17.338 24.666 1.00 39.91 ? 23 DC B OP1 1 ATOM 448 O OP2 . DC B 1 11 ? 8.722 19.383 26.175 1.00 41.03 ? 23 DC B OP2 1 ATOM 449 O "O5'" . DC B 1 11 ? 10.465 17.637 25.840 1.00 25.43 ? 23 DC B "O5'" 1 ATOM 450 C "C5'" . DC B 1 11 ? 11.343 16.842 25.035 1.00 28.75 ? 23 DC B "C5'" 1 ATOM 451 C "C4'" . DC B 1 11 ? 12.778 17.150 25.407 1.00 36.24 ? 23 DC B "C4'" 1 ATOM 452 O "O4'" . DC B 1 11 ? 13.218 18.260 24.581 1.00 33.51 ? 23 DC B "O4'" 1 ATOM 453 C "C3'" . DC B 1 11 ? 12.967 17.522 26.864 1.00 34.00 ? 23 DC B "C3'" 1 ATOM 454 O "O3'" . DC B 1 11 ? 13.823 16.607 27.562 1.00 35.09 ? 23 DC B "O3'" 1 ATOM 455 C "C2'" . DC B 1 11 ? 13.598 18.880 26.813 1.00 36.27 ? 23 DC B "C2'" 1 ATOM 456 C "C1'" . DC B 1 11 ? 13.982 19.146 25.367 1.00 38.84 ? 23 DC B "C1'" 1 ATOM 457 N N1 . DC B 1 11 ? 13.701 20.542 24.972 1.00 30.71 ? 23 DC B N1 1 ATOM 458 C C2 . DC B 1 11 ? 14.756 21.281 24.432 1.00 29.17 ? 23 DC B C2 1 ATOM 459 O O2 . DC B 1 11 ? 15.858 20.727 24.315 1.00 21.83 ? 23 DC B O2 1 ATOM 460 N N3 . DC B 1 11 ? 14.544 22.567 24.059 1.00 24.36 ? 23 DC B N3 1 ATOM 461 C C4 . DC B 1 11 ? 13.334 23.105 24.210 1.00 20.17 ? 23 DC B C4 1 ATOM 462 N N4 . DC B 1 11 ? 13.175 24.374 23.825 1.00 21.33 ? 23 DC B N4 1 ATOM 463 C C5 . DC B 1 11 ? 12.238 22.378 24.757 1.00 21.20 ? 23 DC B C5 1 ATOM 464 C C6 . DC B 1 11 ? 12.469 21.108 25.122 1.00 21.12 ? 23 DC B C6 1 ATOM 465 P P . DG B 1 12 ? 14.035 16.787 29.155 1.00 41.19 ? 24 DG B P 1 ATOM 466 O OP1 . DG B 1 12 ? 14.240 15.434 29.732 1.00 49.23 ? 24 DG B OP1 1 ATOM 467 O OP2 . DG B 1 12 ? 12.954 17.682 29.647 1.00 27.08 ? 24 DG B OP2 1 ATOM 468 O "O5'" . DG B 1 12 ? 15.413 17.575 29.305 1.00 33.33 ? 24 DG B "O5'" 1 ATOM 469 C "C5'" . DG B 1 12 ? 16.651 16.958 28.935 1.00 26.73 ? 24 DG B "C5'" 1 ATOM 470 C "C4'" . DG B 1 12 ? 17.697 18.014 28.694 1.00 34.26 ? 24 DG B "C4'" 1 ATOM 471 O "O4'" . DG B 1 12 ? 17.238 18.975 27.706 1.00 34.10 ? 24 DG B "O4'" 1 ATOM 472 C "C3'" . DG B 1 12 ? 18.046 18.866 29.901 1.00 26.00 ? 24 DG B "C3'" 1 ATOM 473 O "O3'" . DG B 1 12 ? 19.035 18.228 30.709 1.00 32.63 ? 24 DG B "O3'" 1 ATOM 474 C "C2'" . DG B 1 12 ? 18.550 20.147 29.301 1.00 32.92 ? 24 DG B "C2'" 1 ATOM 475 C "C1'" . DG B 1 12 ? 17.922 20.210 27.924 1.00 31.12 ? 24 DG B "C1'" 1 ATOM 476 N N9 . DG B 1 12 ? 16.906 21.254 27.753 1.00 22.58 ? 24 DG B N9 1 ATOM 477 C C8 . DG B 1 12 ? 15.579 21.161 28.093 1.00 23.80 ? 24 DG B C8 1 ATOM 478 N N7 . DG B 1 12 ? 14.894 22.230 27.835 1.00 23.49 ? 24 DG B N7 1 ATOM 479 C C5 . DG B 1 12 ? 15.832 23.087 27.289 1.00 21.79 ? 24 DG B C5 1 ATOM 480 C C6 . DG B 1 12 ? 15.672 24.415 26.811 1.00 22.67 ? 24 DG B C6 1 ATOM 481 O O6 . DG B 1 12 ? 14.622 25.054 26.803 1.00 19.67 ? 24 DG B O6 1 ATOM 482 N N1 . DG B 1 12 ? 16.867 24.927 26.338 1.00 20.68 ? 24 DG B N1 1 ATOM 483 C C2 . DG B 1 12 ? 18.067 24.259 26.322 1.00 20.19 ? 24 DG B C2 1 ATOM 484 N N2 . DG B 1 12 ? 19.136 24.897 25.830 1.00 24.59 ? 24 DG B N2 1 ATOM 485 N N3 . DG B 1 12 ? 18.224 23.027 26.764 1.00 20.59 ? 24 DG B N3 1 ATOM 486 C C4 . DG B 1 12 ? 17.073 22.507 27.229 1.00 18.18 ? 24 DG B C4 1 HETATM 487 MG MG . MG C 2 . ? 13.920 28.972 19.966 1.00 28.67 ? 26 MG A MG 1 HETATM 488 C C1 . RKA D 3 . ? 6.924 23.708 8.591 1.00 47.68 ? 25 RKA A C1 1 HETATM 489 C C2 . RKA D 3 . ? 6.689 22.990 9.743 1.00 42.58 ? 25 RKA A C2 1 HETATM 490 C C3 . RKA D 3 . ? 7.849 22.254 10.049 1.00 43.35 ? 25 RKA A C3 1 HETATM 491 N N4 . RKA D 3 . ? 8.817 22.538 9.062 1.00 47.74 ? 25 RKA A N4 1 HETATM 492 C C5 . RKA D 3 . ? 8.241 23.441 8.154 1.00 50.48 ? 25 RKA A C5 1 HETATM 493 C C6 . RKA D 3 . ? 8.077 21.366 11.139 1.00 38.77 ? 25 RKA A C6 1 HETATM 494 C C7 . RKA D 3 . ? 7.071 21.030 12.065 1.00 38.84 ? 25 RKA A C7 1 HETATM 495 C C8 . RKA D 3 . ? 7.335 20.160 13.116 1.00 34.76 ? 25 RKA A C8 1 HETATM 496 C C9 . RKA D 3 . ? 8.612 19.604 13.276 1.00 41.81 ? 25 RKA A C9 1 HETATM 497 C C10 . RKA D 3 . ? 9.626 19.923 12.375 1.00 28.98 ? 25 RKA A C10 1 HETATM 498 C C11 . RKA D 3 . ? 9.356 20.792 11.322 1.00 39.25 ? 25 RKA A C11 1 HETATM 499 C C12 . RKA D 3 . ? 8.889 23.994 7.009 1.00 46.15 ? 25 RKA A C12 1 HETATM 500 C C13 . RKA D 3 . ? 8.219 24.956 6.225 1.00 49.43 ? 25 RKA A C13 1 HETATM 501 C C14 . RKA D 3 . ? 8.821 25.512 5.110 1.00 48.02 ? 25 RKA A C14 1 HETATM 502 C C15 . RKA D 3 . ? 10.109 25.135 4.725 1.00 44.71 ? 25 RKA A C15 1 HETATM 503 C C16 . RKA D 3 . ? 10.790 24.185 5.480 1.00 37.52 ? 25 RKA A C16 1 HETATM 504 C C17 . RKA D 3 . ? 10.185 23.628 6.606 1.00 41.99 ? 25 RKA A C17 1 HETATM 505 N N18 . RKA D 3 . ? 10.771 25.705 3.549 1.00 46.18 ? 25 RKA A N18 1 HETATM 506 C C19 . RKA D 3 . ? 11.639 25.107 2.549 1.00 54.55 ? 25 RKA A C19 1 HETATM 507 N N20 . RKA D 3 . ? 11.804 23.853 2.480 1.00 49.62 ? 25 RKA A N20 1 HETATM 508 C C21 . RKA D 3 . ? 12.357 26.021 1.574 1.00 64.11 ? 25 RKA A C21 1 HETATM 509 C C22 . RKA D 3 . ? 12.622 25.587 0.265 1.00 70.26 ? 25 RKA A C22 1 HETATM 510 C C23 . RKA D 3 . ? 13.281 26.427 -0.630 1.00 72.90 ? 25 RKA A C23 1 HETATM 511 C C24 . RKA D 3 . ? 13.681 27.702 -0.226 1.00 71.30 ? 25 RKA A C24 1 HETATM 512 C C25 . RKA D 3 . ? 13.405 28.140 1.073 1.00 69.57 ? 25 RKA A C25 1 HETATM 513 C C26 . RKA D 3 . ? 12.750 27.307 1.973 1.00 66.60 ? 25 RKA A C26 1 HETATM 514 N N27 . RKA D 3 . ? 8.958 18.683 14.359 1.00 54.72 ? 25 RKA A N27 1 HETATM 515 C C28 . RKA D 3 . ? 9.972 18.628 15.395 1.00 63.57 ? 25 RKA A C28 1 HETATM 516 N N29 . RKA D 3 . ? 11.013 19.355 15.421 1.00 85.05 ? 25 RKA A N29 1 HETATM 517 C C30 . RKA D 3 . ? 9.757 17.626 16.520 1.00 67.69 ? 25 RKA A C30 1 HETATM 518 C C31 . RKA D 3 . ? 9.293 16.338 16.223 1.00 70.75 ? 25 RKA A C31 1 HETATM 519 C C32 . RKA D 3 . ? 9.092 15.413 17.246 1.00 68.08 ? 25 RKA A C32 1 HETATM 520 C C33 . RKA D 3 . ? 9.358 15.784 18.562 1.00 70.56 ? 25 RKA A C33 1 HETATM 521 C C34 . RKA D 3 . ? 9.819 17.062 18.862 1.00 67.58 ? 25 RKA A C34 1 HETATM 522 C C35 . RKA D 3 . ? 10.020 17.990 17.846 1.00 65.61 ? 25 RKA A C35 1 HETATM 523 O O . HOH E 4 . ? 9.752 13.568 8.445 1.00 25.96 ? 27 HOH A O 1 HETATM 524 O O . HOH E 4 . ? 11.779 28.118 23.417 1.00 34.71 ? 28 HOH A O 1 HETATM 525 O O . HOH E 4 . ? 17.652 31.021 19.176 1.00 25.20 ? 29 HOH A O 1 HETATM 526 O O . HOH E 4 . ? 16.241 30.976 17.060 1.00 37.51 ? 32 HOH A O 1 HETATM 527 O O . HOH E 4 . ? 9.097 15.685 1.446 1.00 27.61 ? 33 HOH A O 1 HETATM 528 O O . HOH E 4 . ? 12.340 29.246 -3.050 1.00 43.02 ? 36 HOH A O 1 HETATM 529 O O . HOH E 4 . ? 17.692 27.432 16.622 1.00 47.82 ? 37 HOH A O 1 HETATM 530 O O . HOH E 4 . ? 16.165 16.517 18.933 1.00 33.41 ? 38 HOH A O 1 HETATM 531 O O . HOH E 4 . ? 20.368 30.188 19.212 1.00 32.14 ? 39 HOH A O 1 HETATM 532 O O . HOH E 4 . ? 11.957 31.299 23.190 1.00 40.47 ? 41 HOH A O 1 HETATM 533 O O . HOH E 4 . ? 6.832 15.092 5.249 1.00 41.85 ? 42 HOH A O 1 HETATM 534 O O . HOH E 4 . ? 18.082 24.757 14.835 1.00 35.51 ? 43 HOH A O 1 HETATM 535 O O . HOH E 4 . ? 13.826 12.269 11.313 1.00 36.26 ? 45 HOH A O 1 HETATM 536 O O . HOH E 4 . ? 16.474 28.537 14.634 1.00 42.26 ? 46 HOH A O 1 HETATM 537 O O . HOH E 4 . ? 6.916 17.036 2.966 1.00 39.76 ? 48 HOH A O 1 HETATM 538 O O . HOH E 4 . ? 13.219 16.059 18.075 1.00 41.28 ? 51 HOH A O 1 HETATM 539 O O . HOH E 4 . ? 12.795 31.422 25.560 1.00 32.50 ? 52 HOH A O 1 HETATM 540 O O . HOH E 4 . ? 16.653 32.012 14.406 1.00 55.44 ? 53 HOH A O 1 HETATM 541 O O . HOH E 4 . ? 10.338 25.659 -8.413 1.00 36.23 ? 54 HOH A O 1 HETATM 542 O O . HOH E 4 . ? 4.659 25.973 5.457 1.00 55.32 ? 57 HOH A O 1 HETATM 543 O O . HOH E 4 . ? 9.352 28.455 0.224 1.00 45.24 ? 58 HOH A O 1 HETATM 544 O O . HOH E 4 . ? 10.190 28.120 2.734 1.00 51.80 ? 60 HOH A O 1 HETATM 545 O O . HOH E 4 . ? 2.661 25.317 1.065 1.00 39.68 ? 61 HOH A O 1 HETATM 546 O O . HOH E 4 . ? 1.366 22.949 3.061 1.00 36.86 ? 62 HOH A O 1 HETATM 547 O O . HOH E 4 . ? 25.277 16.437 15.342 1.00 47.77 ? 64 HOH A O 1 HETATM 548 O O . HOH E 4 . ? 16.038 28.836 20.040 1.00 20.20 ? 65 HOH A O 1 HETATM 549 O O . HOH E 4 . ? 13.999 30.614 21.312 1.00 30.63 ? 66 HOH A O 1 HETATM 550 O O . HOH E 4 . ? 13.791 27.633 21.610 1.00 29.33 ? 67 HOH A O 1 HETATM 551 O O . HOH F 4 . ? 14.355 27.382 15.848 1.00 29.74 ? 30 HOH B O 1 HETATM 552 O O . HOH F 4 . ? 10.116 25.148 24.538 1.00 34.92 ? 31 HOH B O 1 HETATM 553 O O . HOH F 4 . ? 12.278 7.584 -8.545 1.00 37.98 ? 34 HOH B O 1 HETATM 554 O O . HOH F 4 . ? 12.173 22.197 28.809 1.00 33.84 ? 35 HOH B O 1 HETATM 555 O O . HOH F 4 . ? 10.735 26.766 19.559 1.00 34.95 ? 40 HOH B O 1 HETATM 556 O O . HOH F 4 . ? 9.926 26.892 16.865 1.00 51.35 ? 44 HOH B O 1 HETATM 557 O O . HOH F 4 . ? 2.154 18.647 19.391 1.00 52.25 ? 47 HOH B O 1 HETATM 558 O O . HOH F 4 . ? 11.592 28.014 15.208 1.00 45.64 ? 49 HOH B O 1 HETATM 559 O O . HOH F 4 . ? 10.918 12.700 0.421 1.00 54.88 ? 50 HOH B O 1 HETATM 560 O O . HOH F 4 . ? 7.304 24.374 23.656 1.00 51.18 ? 55 HOH B O 1 HETATM 561 O O . HOH F 4 . ? 5.598 25.085 19.649 1.00 40.87 ? 56 HOH B O 1 HETATM 562 O O . HOH F 4 . ? 7.772 29.913 14.986 1.00 39.82 ? 59 HOH B O 1 HETATM 563 O O . HOH F 4 . ? 18.412 29.173 6.838 1.00 47.68 ? 63 HOH B O 1 HETATM 564 O O . HOH F 4 . ? 13.838 27.328 18.614 1.00 18.48 ? 64 HOH B O 1 HETATM 565 O O . HOH F 4 . ? 11.804 29.113 19.897 1.00 30.24 ? 65 HOH B O 1 HETATM 566 O O . HOH F 4 . ? 14.047 30.303 18.318 1.00 24.58 ? 66 HOH B O 1 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DC 3 3 3 DC C A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DA 5 5 5 DA A A . n A 1 6 DA 6 6 6 DA A A . n A 1 7 DT 7 7 7 DT T A . n A 1 8 DT 8 8 8 DT T A . n A 1 9 DC 9 9 9 DC C A . n A 1 10 DG 10 10 10 DG G A . n A 1 11 DC 11 11 11 DC C A . n A 1 12 DG 12 12 12 DG G A . n B 1 1 DC 1 13 13 DC C B . n B 1 2 DG 2 14 14 DG G B . n B 1 3 DC 3 15 15 DC C B . n B 1 4 DG 4 16 16 DG G B . n B 1 5 DA 5 17 17 DA A B . n B 1 6 DA 6 18 18 DA A B . n B 1 7 DT 7 19 19 DT T B . n B 1 8 DT 8 20 20 DT T B . n B 1 9 DC 9 21 21 DC C B . n B 1 10 DG 10 22 22 DG G B . n B 1 11 DC 11 23 23 DC C B . n B 1 12 DG 12 24 24 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 26 26 MG MO6 A . D 3 RKA 1 25 25 RKA RKA A . E 4 HOH 1 27 27 HOH HOH A . E 4 HOH 2 28 28 HOH HOH A . E 4 HOH 3 29 29 HOH HOH A . E 4 HOH 4 32 32 HOH HOH A . E 4 HOH 5 33 33 HOH HOH A . E 4 HOH 6 36 36 HOH HOH A . E 4 HOH 7 37 37 HOH HOH A . E 4 HOH 8 38 38 HOH HOH A . E 4 HOH 9 39 39 HOH HOH A . E 4 HOH 10 41 41 HOH HOH A . E 4 HOH 11 42 42 HOH HOH A . E 4 HOH 12 43 43 HOH HOH A . E 4 HOH 13 45 45 HOH HOH A . E 4 HOH 14 46 46 HOH HOH A . E 4 HOH 15 48 48 HOH HOH A . E 4 HOH 16 51 51 HOH HOH A . E 4 HOH 17 52 52 HOH HOH A . E 4 HOH 18 53 53 HOH HOH A . E 4 HOH 19 54 54 HOH HOH A . E 4 HOH 20 57 57 HOH HOH A . E 4 HOH 21 58 58 HOH HOH A . E 4 HOH 22 60 60 HOH HOH A . E 4 HOH 23 61 61 HOH HOH A . E 4 HOH 24 62 62 HOH HOH A . E 4 HOH 25 64 64 HOH HOH A . E 4 HOH 26 65 26 HOH MO6 A . E 4 HOH 27 66 26 HOH MO6 A . E 4 HOH 28 67 26 HOH MO6 A . F 4 HOH 1 30 30 HOH HOH B . F 4 HOH 2 31 31 HOH HOH B . F 4 HOH 3 34 34 HOH HOH B . F 4 HOH 4 35 35 HOH HOH B . F 4 HOH 5 40 40 HOH HOH B . F 4 HOH 6 44 44 HOH HOH B . F 4 HOH 7 47 47 HOH HOH B . F 4 HOH 8 49 49 HOH HOH B . F 4 HOH 9 50 50 HOH HOH B . F 4 HOH 10 55 55 HOH HOH B . F 4 HOH 11 56 56 HOH HOH B . F 4 HOH 12 59 59 HOH HOH B . F 4 HOH 13 63 63 HOH HOH B . F 4 HOH 14 64 26 HOH MO6 B . F 4 HOH 15 65 26 HOH MO6 B . F 4 HOH 16 66 26 HOH MO6 B . # _struct_site_keywords.site_id 1 _struct_site_keywords.text 'minor groove binder' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? E HOH . ? A HOH 65 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 66 ? 1_555 89.4 ? 2 O ? E HOH . ? A HOH 65 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 67 ? 1_555 89.6 ? 3 O ? E HOH . ? A HOH 66 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 67 ? 1_555 89.9 ? 4 O ? E HOH . ? A HOH 65 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? F HOH . ? B HOH 64 ? 1_555 90.6 ? 5 O ? E HOH . ? A HOH 66 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? F HOH . ? B HOH 64 ? 1_555 179.9 ? 6 O ? E HOH . ? A HOH 67 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? F HOH . ? B HOH 64 ? 1_555 90.1 ? 7 O ? E HOH . ? A HOH 65 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? F HOH . ? B HOH 65 ? 1_555 179.8 ? 8 O ? E HOH . ? A HOH 66 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? F HOH . ? B HOH 65 ? 1_555 90.4 ? 9 O ? E HOH . ? A HOH 67 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? F HOH . ? B HOH 65 ? 1_555 90.4 ? 10 O ? F HOH . ? B HOH 64 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? F HOH . ? B HOH 65 ? 1_555 89.6 ? 11 O ? E HOH . ? A HOH 65 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? F HOH . ? B HOH 66 ? 1_555 90.4 ? 12 O ? E HOH . ? A HOH 66 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? F HOH . ? B HOH 66 ? 1_555 90.3 ? 13 O ? E HOH . ? A HOH 67 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? F HOH . ? B HOH 66 ? 1_555 179.8 ? 14 O ? F HOH . ? B HOH 64 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? F HOH . ? B HOH 66 ? 1_555 89.6 ? 15 O ? F HOH . ? B HOH 65 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? F HOH . ? B HOH 66 ? 1_555 89.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-05-22 2 'Structure model' 1 1 2007-10-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2019-07-24 6 'Structure model' 1 5 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Refinement description' 6 6 'Structure model' 'Data collection' 7 6 'Structure model' 'Database references' 8 6 'Structure model' 'Derived calculations' 9 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' software 3 6 'Structure model' chem_comp_atom 4 6 'Structure model' chem_comp_bond 5 6 'Structure model' database_2 6 6 'Structure model' pdbx_initial_refinement_model 7 6 'Structure model' pdbx_struct_conn_angle 8 6 'Structure model' struct_conn 9 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_software.classification' 2 5 'Structure model' '_software.name' 3 6 'Structure model' '_database_2.pdbx_DOI' 4 6 'Structure model' '_database_2.pdbx_database_accession' 5 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 6 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 9 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 10 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 11 6 'Structure model' '_pdbx_struct_conn_angle.value' 12 6 'Structure model' '_struct_conn.pdbx_dist_value' 13 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 14 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 15 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 16 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 17 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 18 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELXL-97 refinement . ? 1 CNS refinement . ? 2 DENZO 'data reduction' . ? 3 CNS phasing . ? 4 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 103.51 108.00 -4.49 0.70 N 2 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 103.53 108.00 -4.47 0.70 N 3 1 "C3'" A DG 10 ? ? "C2'" A DG 10 ? ? "C1'" A DG 10 ? ? 97.20 102.40 -5.20 0.80 N 4 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 110.45 108.30 2.15 0.30 N 5 1 "O4'" B DA 18 ? ? "C1'" B DA 18 ? ? N9 B DA 18 ? ? 103.73 108.00 -4.27 0.70 N 6 1 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 101.38 108.00 -6.62 0.70 N 7 1 "O4'" B DC 21 ? ? "C1'" B DC 21 ? ? N1 B DC 21 ? ? 100.88 108.00 -7.12 0.70 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 MG MG MG N N 147 RKA C1 C Y N 148 RKA C2 C Y N 149 RKA C3 C Y N 150 RKA N4 N Y N 151 RKA C5 C Y N 152 RKA C6 C Y N 153 RKA C7 C Y N 154 RKA C8 C Y N 155 RKA C9 C Y N 156 RKA C10 C Y N 157 RKA C11 C Y N 158 RKA C12 C Y N 159 RKA C13 C Y N 160 RKA C14 C Y N 161 RKA C15 C Y N 162 RKA C16 C Y N 163 RKA C17 C Y N 164 RKA N18 N N N 165 RKA C19 C N N 166 RKA N20 N N N 167 RKA C21 C Y N 168 RKA C22 C Y N 169 RKA C23 C Y N 170 RKA C24 C Y N 171 RKA C25 C Y N 172 RKA C26 C Y N 173 RKA N27 N N N 174 RKA C28 C N N 175 RKA N29 N N N 176 RKA C30 C Y N 177 RKA C31 C Y N 178 RKA C32 C Y N 179 RKA C33 C Y N 180 RKA C34 C Y N 181 RKA C35 C Y N 182 RKA H1 H N N 183 RKA H2 H N N 184 RKA HN4 H N N 185 RKA H7 H N N 186 RKA H8 H N N 187 RKA H10 H N N 188 RKA H11 H N N 189 RKA H13 H N N 190 RKA H14 H N N 191 RKA H16 H N N 192 RKA H17 H N N 193 RKA HN18 H N N 194 RKA HN20 H N N 195 RKA H22 H N N 196 RKA H23 H N N 197 RKA H24 H N N 198 RKA H25 H N N 199 RKA H26 H N N 200 RKA HN27 H N N 201 RKA HN29 H N N 202 RKA H31 H N N 203 RKA H32 H N N 204 RKA H33 H N N 205 RKA H34 H N N 206 RKA H35 H N N 207 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 RKA C1 C2 sing Y N 152 RKA C1 C5 doub Y N 153 RKA C1 H1 sing N N 154 RKA C2 C3 doub Y N 155 RKA C2 H2 sing N N 156 RKA C3 N4 sing Y N 157 RKA C3 C6 sing Y N 158 RKA N4 C5 sing Y N 159 RKA N4 HN4 sing N N 160 RKA C5 C12 sing Y N 161 RKA C6 C7 sing Y N 162 RKA C6 C11 doub Y N 163 RKA C7 C8 doub Y N 164 RKA C7 H7 sing N N 165 RKA C8 C9 sing Y N 166 RKA C8 H8 sing N N 167 RKA C9 C10 doub Y N 168 RKA C9 N27 sing N N 169 RKA C10 C11 sing Y N 170 RKA C10 H10 sing N N 171 RKA C11 H11 sing N N 172 RKA C12 C13 doub Y N 173 RKA C12 C17 sing Y N 174 RKA C13 C14 sing Y N 175 RKA C13 H13 sing N N 176 RKA C14 C15 doub Y N 177 RKA C14 H14 sing N N 178 RKA C15 C16 sing Y N 179 RKA C15 N18 sing N N 180 RKA C16 C17 doub Y N 181 RKA C16 H16 sing N N 182 RKA C17 H17 sing N N 183 RKA N18 C19 sing N N 184 RKA N18 HN18 sing N N 185 RKA C19 N20 doub N Z 186 RKA C19 C21 sing N N 187 RKA N20 HN20 sing N N 188 RKA C21 C22 doub Y N 189 RKA C21 C26 sing Y N 190 RKA C22 C23 sing Y N 191 RKA C22 H22 sing N N 192 RKA C23 C24 doub Y N 193 RKA C23 H23 sing N N 194 RKA C24 C25 sing Y N 195 RKA C24 H24 sing N N 196 RKA C25 C26 doub Y N 197 RKA C25 H25 sing N N 198 RKA C26 H26 sing N N 199 RKA N27 C28 sing N N 200 RKA N27 HN27 sing N N 201 RKA C28 N29 doub N E 202 RKA C28 C30 sing N N 203 RKA N29 HN29 sing N N 204 RKA C30 C31 doub Y N 205 RKA C30 C35 sing Y N 206 RKA C31 C32 sing Y N 207 RKA C31 H31 sing N N 208 RKA C32 C33 doub Y N 209 RKA C32 H32 sing N N 210 RKA C33 C34 sing Y N 211 RKA C33 H33 sing N N 212 RKA C34 C35 doub Y N 213 RKA C34 H34 sing N N 214 RKA C35 H35 sing N N 215 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2GYX 'double helix' 2GYX 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 12 1_555 0.534 -0.313 0.072 3.981 -18.327 0.853 1 A_DC1:DG24_B A 1 ? B 24 ? 19 1 1 A DG 2 1_555 B DC 11 1_555 -0.085 -0.177 0.219 -0.768 -12.813 -2.864 2 A_DG2:DC23_B A 2 ? B 23 ? 19 1 1 A DC 3 1_555 B DG 10 1_555 0.339 -0.129 0.062 -6.041 -4.909 2.924 3 A_DC3:DG22_B A 3 ? B 22 ? 19 1 1 A DG 4 1_555 B DC 9 1_555 -0.274 -0.084 -0.240 5.066 -13.117 0.263 4 A_DG4:DC21_B A 4 ? B 21 ? 19 1 1 A DA 5 1_555 B DT 8 1_555 0.012 -0.146 0.014 5.918 -19.238 4.973 5 A_DA5:DT20_B A 5 ? B 20 ? 20 1 1 A DA 6 1_555 B DT 7 1_555 0.327 -0.185 0.016 -1.378 -17.495 6.398 6 A_DA6:DT19_B A 6 ? B 19 ? 20 1 1 A DT 7 1_555 B DA 6 1_555 0.057 -0.191 0.040 -4.772 -18.680 5.575 7 A_DT7:DA18_B A 7 ? B 18 ? 20 1 1 A DT 8 1_555 B DA 5 1_555 -0.306 -0.159 -0.239 -1.908 -18.156 5.840 8 A_DT8:DA17_B A 8 ? B 17 ? 20 1 1 A DC 9 1_555 B DG 4 1_555 0.145 -0.105 -0.150 -2.609 -12.467 -1.493 9 A_DC9:DG16_B A 9 ? B 16 ? 19 1 1 A DG 10 1_555 B DC 3 1_555 0.286 -0.311 0.261 10.750 -8.838 -2.476 10 A_DG10:DC15_B A 10 ? B 15 ? 19 1 1 A DC 11 1_555 B DG 2 1_555 0.015 -0.299 0.422 5.056 -19.807 -8.613 11 A_DC11:DG14_B A 11 ? B 14 ? 19 1 1 A DG 12 1_555 B DC 1 1_555 -0.591 -0.216 -0.684 6.397 24.939 -4.795 12 A_DG12:DC13_B A 12 ? B 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 12 1_555 A DG 2 1_555 B DC 11 1_555 -0.155 0.095 3.444 0.991 6.499 33.029 -0.955 0.438 3.394 11.291 -1.722 33.659 1 AA_DC1DG2:DC23DG24_BB A 1 ? B 24 ? A 2 ? B 23 ? 1 A DG 2 1_555 B DC 11 1_555 A DC 3 1_555 B DG 10 1_555 0.806 0.687 3.422 2.546 -4.198 42.785 1.368 -0.836 3.383 -5.732 -3.476 43.053 2 AA_DG2DC3:DG22DC23_BB A 2 ? B 23 ? A 3 ? B 22 ? 1 A DC 3 1_555 B DG 10 1_555 A DG 4 1_555 B DC 9 1_555 -0.449 0.771 3.235 4.388 10.805 25.158 -1.079 2.030 3.170 23.277 -9.452 27.690 3 AA_DC3DG4:DC21DG22_BB A 3 ? B 22 ? A 4 ? B 21 ? 1 A DG 4 1_555 B DC 9 1_555 A DA 5 1_555 B DT 8 1_555 0.278 0.278 3.188 -1.501 3.688 36.748 -0.047 -0.636 3.186 5.829 2.372 36.956 4 AA_DG4DA5:DT20DC21_BB A 4 ? B 21 ? A 5 ? B 20 ? 1 A DA 5 1_555 B DT 8 1_555 A DA 6 1_555 B DT 7 1_555 -0.238 -0.112 3.371 -1.636 2.985 36.592 -0.597 0.148 3.359 4.741 2.599 36.745 5 AA_DA5DA6:DT19DT20_BB A 5 ? B 20 ? A 6 ? B 19 ? 1 A DA 6 1_555 B DT 7 1_555 A DT 7 1_555 B DA 6 1_555 0.045 -0.653 3.247 0.955 -1.363 33.036 -0.917 0.081 3.271 -2.394 -1.677 33.077 6 AA_DA6DT7:DA18DT19_BB A 6 ? B 19 ? A 7 ? B 18 ? 1 A DT 7 1_555 B DA 6 1_555 A DT 8 1_555 B DA 5 1_555 0.008 0.028 3.086 2.875 0.703 34.893 -0.053 0.394 3.077 1.171 -4.783 35.014 7 AA_DT7DT8:DA17DA18_BB A 7 ? B 18 ? A 8 ? B 17 ? 1 A DT 8 1_555 B DA 5 1_555 A DC 9 1_555 B DG 4 1_555 -0.231 0.162 3.301 1.665 -0.164 39.435 0.259 0.540 3.288 -0.244 -2.466 39.469 8 AA_DT8DC9:DG16DA17_BB A 8 ? B 17 ? A 9 ? B 16 ? 1 A DC 9 1_555 B DG 4 1_555 A DG 10 1_555 B DC 3 1_555 0.457 1.021 3.165 -3.994 9.026 30.880 0.232 -1.527 3.244 16.433 7.272 32.383 9 AA_DC9DG10:DC15DG16_BB A 9 ? B 16 ? A 10 ? B 15 ? 1 A DG 10 1_555 B DC 3 1_555 A DC 11 1_555 B DG 2 1_555 -1.227 0.513 3.508 -6.142 -14.401 39.952 2.256 1.019 3.288 -20.164 8.600 42.793 10 AA_DG10DC11:DG14DC15_BB A 10 ? B 15 ? A 11 ? B 14 ? 1 A DC 11 1_555 B DG 2 1_555 A DG 12 1_555 B DC 1 1_555 1.468 0.506 3.648 9.476 -12.506 33.587 2.742 -0.842 3.523 -20.321 -15.398 36.976 11 AA_DC11DG12:DC13DG14_BB A 11 ? B 14 ? A 12 ? B 13 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 "N,N'-(1H-PYRROLE-2,5-DIYLDI-4,1-PHENYLENE)DIBENZENECARBOXIMIDAMIDE" RKA 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2DBE _pdbx_initial_refinement_model.details 'DNA PART OF NDB ENTRY GDL009 OR PDB ENTRY 2DBE' #